Available CRAN Packages By Name


A3Accurate, Adaptable, and Accessible Error Metrics for Predictive Models
aaSEAAmino Acid Substitution Effect Analyser
AATtoolsReliability and Scoring Routines for the Approach-Avoidance Task
ABACUSApps Based Activities for Communicating and Understanding Statistics
abbyyRAccess to Abbyy Optical Character Recognition (OCR) API
abcTools for Approximate Bayesian Computation (ABC)
abc.dataData Only: Tools for Approximate Bayesian Computation (ABC)
ABC.RAPArray Based CpG Region Analysis Pipeline
abcADMFit Accumulated Damage Models and Estimate Reliability using ABC
ABCanalysisComputed ABC Analysis
abcdeFBAABCDE_FBA: A-Biologist-Can-Do-Everything of Flux Balance Analysis with this package
ABCoptimImplementation of Artificial Bee Colony (ABC) Optimization
ABCp2Approximate Bayesian Computational Model for Estimating P2
abcrfApproximate Bayesian Computation via Random Forests
abcrldaAsymptotically Bias-Corrected Regularized Linear Discriminant Analysis
abctoolsTools for ABC Analyses
abdThe Analysis of Biological Data
abdivAlpha and Beta Diversity Measures
abeAugmented Backward Elimination
abessAdaptive Best Subset Selection in Polynomial Time
abf2Load Gap-Free Axon ABF2 Files
abglassoAdaptive Bayesian Graphical Lasso
ABHgenotypeREasy Visualization of ABH Genotypes
abindCombine Multidimensional Arrays
abjutilsUseful Tools for Jurimetrical Analysis Used by the Brazilian Jurimetrics Association
abnormalityMeasure a Subject's Abnormality with Respect to a Reference Population
abodOutlierAngle-Based Outlier Detection
ABPSThe Abnormal Blood Profile Score to Detect Blood Doping
abstractrAn R-Shiny Application for Creating Visual Abstracts
abtestBayesian A/B Testing
Ac3netInferring Directional Conservative Causal Core Gene Networks
ACAAbrupt Change-Point or Aberration Detection in Point Series
academictwitteRAccess the Twitter Academic Research Product Track V2 API Endpoint
accExploring Accelerometer Data
accelerometryFunctions for Processing Accelerometer Data
accelmissingMissing Value Imputation for Accelerometer Data
acceptThe Acute COPD Exacerbation Prediction Tool (ACCEPT)
AcceptanceSamplingCreation and Evaluation of Acceptance Sampling Plans
accrualBayesian Accrual Prediction
accSDAAccelerated Sparse Discriminant Analysis
accucorNatural Abundance Correction of Mass Spectrometer Data
ACDCategorical data analysis with complete or missing responses
ACDmTools for Autoregressive Conditional Duration Models
ace2fastqACE File to FASTQ Converter
acebayesOptimal Bayesian Experimental Design using the ACE Algorithm
aceEditorThe 'Ace' Editor as a HTML Widget
acepackACE and AVAS for Selecting Multiple Regression Transformations
ACEsearch'ACE' Search Engine API
ACEtEstimation of Dynamic Heritability and Comparison of Twin Models
acfMPeriodRobust Estimation of the ACF from the M-Periodogram
acidAnalysing Conditional Income Distributions
acled.apiAutomated Retrieval of ACLED Conflict Event Data
acmeRImplements ACME Estimator of Bird and Bat Mortality by Wind Turbines
ACNEAffymetrix SNP Probe-Summarization using Non-Negative Matrix Factorization
acnrAnnotated Copy-Number Regions
acopulaModelling Dependence with Multivariate Archimax (or any User-Defined Continuous) Copulas
AcousticNDLCodeRCoding Sound Files for Use with NDL
acpAutoregressive Conditional Poisson
aCRMConvenience functions for analytical Customer Relationship Management
acronameEngine for Acronyms and Initialisms
AcrossTicA Cost-Minimal Regular Spanning Subgraph with TreeClust
acrtAutocorrelation Robust Testing
acsDownload, Manipulate, and Present American Community Survey and Decennial Data from the US Census
acssAlgorithmic Complexity for Short Strings
acss.dataData Only: Algorithmic Complexity of Short Strings (Computed via Coding Theorem Method)
ACSWRA Companion Package for the Book "A Course in Statistics with R"
actAligned Corpus Toolkit
ACTCDAsymptotic Classification Theory for Cognitive Diagnosis
ActCRExtract Circadian Rhythms Metrics from Actigraphy Data
actelAcoustic Telemetry Data Analysis
ActFragActivity Fragmentation Metrics Extracted from Minute Level Activity Data
activatrUtilities for Parsing and Plotting Activities
ActiveDriverFinding Cancer Driver Proteins with Enriched Mutations in Post-Translational Modification Sites
ActiveDriverWGSA Driver Discovery Tool for Cancer Whole Genomes
activegpGaussian Process Based Design and Analysis for the Active Subspace Method
activityAnimal Activity Statistics
activityCountsGenerate ActiLife Counts
activityGCMMCircular Mixed Effect Mixture Models of Animal Activity Patterns
ActivityIndexActivity Index Calculation using Raw 'Accelerometry' Data
activPALAdvanced Processing and Chart Generation from activPAL Events Files
actogrammrRead in Activity Data and Plot Actograms
actuarActuarial Functions and Heavy Tailed Distributions
actuaryrDevelop Actuarial Models
AcuityViewA Package for Displaying Visual Scenes as They May Appear to an Animal with Lower Acuity
acumos'Acumos' R Interface
adaThe R Package Ada for Stochastic Boosting
adabagApplies Multiclass AdaBoost.M1, SAMME and Bagging
adagioDiscrete and Global Optimization Routines
adamethodsArchetypoid Algorithms and Anomaly Detection
AdapEnetClassA Class of Adaptive Elastic Net Methods for Censored Data
AdapSampAdaptive Sampling Algorithms
adapt4pvAdaptive Approaches for Signal Detection in Pharmacovigilance
adaptalintCheck Code Style Painlessly
adaptDiagBayesian Adaptive Designs for Diagnostic Trials
AdaptFitOSAdaptive Semiparametric Additive Regression with Simultaneous Confidence Bands and Specification Tests
AdaptGaussGaussian Mixture Models (GMM)
adaptiveGPCAAdaptive Generalized PCA
AdaptiveSparsityAdaptive Sparsity Models
adaptivetauTau-Leaping Stochastic Simulation
adaptMCMCImplementation of a Generic Adaptive Monte Carlo Markov Chain Sampler
adaptMTAdaptive P-Value Thresholding for Multiple Hypothesis Testing with Side Information
ADAPTSAutomated Deconvolution Augmentation of Profiles for Tissue Specific Cells
adaptsmoFMRIAdaptive Smoothing of FMRI Data
adaptTestAdaptive two-stage tests
AdaSamplingAdaptive Sampling for Positive Unlabeled and Label Noise Learning
adassAdaptive Smoothing Spline (AdaSS) Estimator for the Function-on-Function Linear Regression
ADCTAdaptive Design in Clinical Trials
add2ggplotAdd to 'ggplot2'
addhazBinomial and Multinomial Additive Hazard Models
addhazardFit Additive Hazards Models for Survival Analysis
addinsJoaoMeloAddins Made of Joao Melo
addinslistDiscover and Install Useful RStudio Addins
addinsOutline'RStudio' Addins for Show Outline of a R Markdown/'LaTeX' Project
additiveBindings for Generalized Additive Models (GAM)
additiveDEAAdditive Data Envelopment Analysis Models
additivityTestsAdditivity Tests in the Two Way Anova with Single Sub-class Numbers
addregAdditive Regression for Discrete Data
addScalesAdds Labeled Center Line and Scale Lines/Regions to Trellis Plots
ADDTAnalysis of Accelerated Destructive Degradation Test Data
ade4Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences
ade4TkGUI'ade4' Tcl/Tk Graphical User Interface
adeaAlternate DEA Package
adegenetExploratory Analysis of Genetic and Genomic Data
adegraphicsAn S4 Lattice-Based Package for the Representation of Multivariate Data
adehabitatHRHome Range Estimation
adehabitatHSAnalysis of Habitat Selection by Animals
adehabitatLTAnalysis of Animal Movements
adehabitatMATools to Deal with Raster Maps
adephyloExploratory Analyses for the Phylogenetic Comparative Method
adeproA 'shiny' Application for the (Audio-)Visualization of Adverse Event Profiles
adeptAdaptive Empirical Pattern Transformation
adeptdataAccelerometry Data Sets
AdequacyModelAdequacy of Probabilistic Models and General Purpose Optimization
adespatialMultivariate Multiscale Spatial Analysis
adfExplorerImport from and Export to Amiga Disk Files
ADGofTestAnderson-Darling GoF test
adheRenceRXAssess Medication Adherence from Pharmaceutical Claims Data
AdhereRAdherence to Medications
AdhereRVizAdherence to Medications
adhocCalculate Ad Hoc Distance Thresholds for DNA Barcoding Identification
adimproAdaptive Smoothing of Digital Images
adivAnalysis of Diversity
AdjBQRAdjusted Bayesian Quantile Regression Inference
adjclustAdjacency-Constrained Clustering of a Block-Diagonal Similarity Matrix
adjustedcranlogsRemove Automated and Repeated Downloads from 'RStudio' 'CRAN' Download Logs
adklakedataAdirondack Long-Term Lake Data
adliftAn Adaptive Lifting Scheme Algorithm
admiscAdrian Dusa's Miscellaneous
AdMitAdaptive Mixture of Student-t Distributions
admixPackage Admix for Admixture (aka Contamination) Models
admixrAn Interface for Running 'ADMIXTOOLS' Analyses
ADMMAlgorithms using Alternating Direction Method of Multipliers
admmDensestSubmatrixAlternating Direction Method of Multipliers to Solve Dense Dubmatrix Problem
ADMMnetRegularized Model with Selecting the Number of Non-Zeros
ADMMsigmaPenalized Precision Matrix Estimation via ADMM
ADMURAncient Demographic Modelling Using Radiocarbon
adnutsNo-U-Turn MCMC Sampling for 'ADMB' Models
adobeanalyticsrR Client for 'Adobe Analytics' API 2.0
adoptrAdaptive Optimal Two-Stage Designs in R
ADPAdoption Probability, Triers and Users Rate of a New Product
ADPclustFast Clustering Using Adaptive Density Peak Detection
ADPFUse Least Squares Polynomial Regression and Statistical Testing to Improve Savitzky-Golay
adpssDesign and Analysis of Locally or Globally Efficient Adaptive Designs
adsSpatial Point Patterns Analysis
adsDataHubRGoogle Ads Data Hub API Client
AdvancedBasketballStatsAdvanced Basketball Statistics
AdvBinomAppsUpper Clopper-Pearson Confidence Limits for Burn-in Studies under Additional Available Information
advclustObject Oriented Advanced Clustering
AdvDif4Solving 1D Advection Bi-Flux Diffusion Equation
adventrInteractive R Tutorials to Accompany Field (2016), "An Adventure in Statistics"
ADVICEAutomatic Direct Variable Selection via Interrupted Coefficient Estimation
adwaveWavelet Analysis of Genomic Data from Admixed Populations
adwordsRAccess the 'Google Adwords' API
AEDForecastingChange Point Analysis in ARIMA Forecasting
AEenrichAdverse Event Enrichment Tests
aemoDownload and Process AEMO Price and Demand Data
AEPStatistical Modelling for Asymmetric Exponential Power Distribution
AERApplied Econometrics with R
AeRobiologyA Computational Tool for Aerobiological Data
AFModel-Based Estimation of Confounder-Adjusted Attributable Fractions
afcGeneralized Discrimination Score
afdxDiagnosis Performance Using Attributable Fraction
afexAnalysis of Factorial Experiments
affinityRaster Georeferencing, Grid Affine Transforms, Cell Abstraction
affinitymatrixEstimation of Affinity Matrix
affluenceIndexAffluence (Richness) Indices
AFheritabilityThe Attributable Fraction (AF) Described as a Function of Disease Heritability, Prevalence and Intervention Specific Factors
AFMAtomic Force Microscope Image Analysis
afmToolkitFunctions for Atomic Force Microscope Force-Distance Curves Analysis
afptTools for Modelling of Animal Flight Performance
aftgeeAccelerated Failure Time Model with Generalized Estimating Equations
afthdAccelerated Failure Time for High Dimensional Data with MCMC
AGDAnalysis of Growth Data
aGEAdaptive Set-Based Gene-Environment Interaction Test for Rare Variants
AggregateRAggregate Numeric, Date and Categorical Variables
aggregationp-Value Aggregation Methods
AGHmatrixRelationship Matrices for Diploid and Autopolyploid Species
aghqAdaptive Gauss Hermite Quadrature for Bayesian Inference
aglmAccurate Generalized Linear Model
agopAggregation Operators and Preordered Sets
AGPRISAGricultural PRoductivity in Space
AGreadRead Data Files from ActiGraph Monitors
agReeVarious Methods for Measuring Agreement
AgreementIntervalAgreement Interval of Two Measurement Methods
agricolaeStatistical Procedures for Agricultural Research
agricolaeplotrVisualization of Design of Experiments from the 'agricolae' Package
agridatAgricultural Datasets
agriTutorialTutorial Analysis of Some Agricultural Experiments
agriwaterEvapotranspiration and Energy Fluxes Spatial Analysis
agrmtCalculate Concentration and Dispersion in Ordered Rating Scales
AgroRegRegression Analysis Linear and Nonlinear for Agriculture
agrostabStability Analysis for Agricultural Research
AGSDestEstimation in Adaptive Group Sequential Trials
agsemiscMiscellaneous plotting and utility functions
agtboostAdaptive and Automatic Gradient Boosting Computations
ahazRegularization for semiparametric additive hazards regression
AHMAdditive Heredity Model: Method for the Mixture-of-Mixtures Experiments
AHMbookFunctions and Data for the Book 'Applied Hierarchical Modeling in Ecology' Vols 1 and 2
ahMLEMethods for the Additive Hazard Model
ahnrAn Implementation of the Artificial Hydrocarbon Networks
AhoCorasickTrieFast Searching for Multiple Keywords in Multiple Texts
AHPhybridAHP Hybrid Method
ahpsurveyAnalytic Hierarchy Process for Survey Data
ahptopsis2nHybrid Method for Multiple Criteria Decision-Making (MCDM)
aibdAttraction Indian Buffet Distribution
AICcmodavgModel Selection and Multimodel Inference Based on (Q)AIC(c)
AIDBox-Cox Power Transformation
aidarTools for Reading AIDA Files
aif360Help Detect and Mitigate Bias in Machine Learning Models
AIGAutomatic Item Generator
aimPlotCreate Pie Like Plot for Completeness
aimsir17Irish Weather Observing Stations Hourly Records for 2017
AIPWAugmented Inverse Probability Weighting
aire.zmvmDownload Mexico City Pollution, Wind, and Temperature Data
airGRSuite of GR Hydrological Models for Precipitation-Runoff Modelling
airGRdatassimEnsemble-Based Data Assimilation with GR Hydrological Models
airGRteachingTeaching Hydrological Modelling with the GR Rainfall-Runoff Models ('Shiny' Interface Included)
aiRlyR Wrapper for 'Airly' API
airportrConvenience Tools for Working with Airport Data
airportsData on Airports
airqualityESAir Quality Measurements in Spain from 2011 to 2018
airrAIRR Data Representation Reference Library
AirSensorProcess and Display Data from Air Quality Sensors
airtEvaluation of Algorithm Collections Using Item Response Theory
aiRthermoAtmospheric Thermodynamics and Visualization
ajvAnother JSON Schema Validator
akcAutomatic Knowledge Classification
AkeAssociated Kernel Estimations
akiFlaggerFlags Acute Kidney Injury (AKI)
akimaInterpolation of Irregularly and Regularly Spaced Data
akmbiclustAlternating K-Means Biclustering
akmeansAdaptive Kmeans algorithm based on threshold
akmedoidsAnchored Kmedoids for Longitudinal Data Clustering
alabamaConstrained Nonlinear Optimization
alakazamImmunoglobulin Clonal Lineage and Diversity Analysis
ALassoSurvICAdaptive Lasso for the Cox Regression with Interval Censored and Possibly Left Truncated Data
albatrossPARAFAC Analysis of Fluorescence Excitation-Emission Matrices
albopictusAge-Structured Population Dynamics Model
aldThe Asymmetric Laplace Distribution
ALDqrQuantile Regression Using Asymmetric Laplace Distribution
aldvmmAdjusted Limited Dependent Variable Mixture Models
ALEPlotAccumulated Local Effects (ALE) Plots and Partial Dependence (PD) Plots
aLFQEstimating Absolute Protein Quantities from Label-Free LC-MS/MS Proteomics Data
alfrConnectivity to 'Alfresco' Content Management Repositories
alfredDownloading Time Series from ALFRED Database for Various Vintages
algaeClassifyDetermine Phytoplankton Functional Groups Based on Functional Traits
AlgDesignAlgorithmic Experimental Design
AlgebraicHaploPackageHaplotype Two Snips Out of a Paired Group of Patients
algoImplement an Address Search Auto Completion Menu on 'Shiny' Text Inputs Using the 'Algolia Places' 'Javascript' Library
algorithmiaAllows you to Easily Interact with the Algorithmia Platform
aliases2entrezConverts Human gene symbols to entrez IDs
alignfigRVisualizing Multiple Sequence Alignments with 'ggplot2'
allcontributorsAcknowledge all Contributors to a Project
alleHapAllele Imputation and Haplotype Reconstruction from Pedigree Databases
allelematchIdentifying Unique Multilocus Genotypes where Genotyping Error and Missing Data may be Present
AlleleRetainAllele Retention, Inbreeding, and Demography
AlleleShiftPredict and Visualize Population-Level Changes in Allele Frequencies in Response to Climate Change
allestimatesEffect Estimates from All Models
AllPossibleSpellingsComputes all of a word's possible spellings
alluvialAlluvial Diagrams
almanacTools for Working with Recurrence Rules
alookrModel Classifier for Binary Classification
alpacaFit GLM's with High-Dimensional k-Way Fixed Effects
alphabetrAlgorithms for High-Throughput Sequencing of Antigen-Specific T Cells
alphahullGeneralization of the Convex Hull of a Sample of Points in the Plane
alphaOutlierObtain Alpha-Outlier Regions for Well-Known Probability Distributions
AlphaPartPartition/Decomposition of Breeding Values by Paths of Information
alphashape3dImplementation of the 3D Alpha-Shape for the Reconstruction of 3D Sets from a Point Cloud
AlphaSimRBreeding Program Simulations
alphastableInference for Stable Distribution
alphavantagerLightweight R Interface to the Alpha Vantage API
alr4Data to Accompany Applied Linear Regression 4th Edition
ALSMultivariate Curve Resolution Alternating Least Squares (MCR-ALS)
ALSCPCAccelerated line search algorithm for simultaneous orthogonal transformation of several positive definite symmetric matrices to nearly diagonal form
ALSMCompanion to Applied Linear Statistical Models
altadataAPI Wrapper for Altadata.io
altairInterface to 'Altair'
altfuelrProvides an Interface to the NREL Alternate Fuels Locator
altmetaAlternative Meta-Analysis Methods
ALToptOptimal Experimental Designs for Accelerated Life Testing
altR2Alternative Estimators to Adjusted R-Squared
amanidaMeta-Analysis for Non-Integral Data
amanpgAlternating Manifold Proximal Gradient Method for Sparse PCA
amapAnother Multidimensional Analysis Package
AMAP.SeqCompare Gene Expressions from 2-Treatment RNA-Seq Experiments
amapGeocodeAn Interface to the 'AutoNavi Maps' API Geocoding Services
AMAPVoxLiDAR Data Voxelisation
ambhasGWGround Water Modelling
ambientA Generator of Multidimensional Noise
ambiorixWeb Framework Inspired by 'Express.js'
AMCPA Model Comparison Perspective
AMCTestmakeRGenerate LaTeX Code for Auto-Multiple-Choice (AMC)
AmeliaA Program for Missing Data
amelieAnomaly Detection with Normal Probability Functions
amenAdditive and Multiplicative Effects Models for Networks and Relational Data
AmericanCallOptThis package includes pricing function for selected American call options with underlying assets that generate payouts
amerikaAmerican Politics-Inspired Color Palette Generator
AmesHousingThe Ames Iowa Housing Data
AMGETPost-processing tool for ADAPT 5
AmigaFFHCommodore Amiga File Format Handler
amlAdaptive Mixed LASSO
ammistabilityAdditive Main Effects and Multiplicative Interaction Model Stability Parameters
AMModelsAdaptive Management Model Manager
AmmoniaConcentrationUn-Ionized Ammonia Concentration
aMNLFAAutomated Moderated Nonlinear Factor Analysis Using 'M-plus'
AMOEBAA Multidirectional Optimum Ecotope-Based Algorithm
ampdAn Algorithm for Automatic Peak Detection in Noisy Periodic and Quasi-Periodic Signals
AmpGramPrediction of Antimicrobial Peptides
ampirPredict Antimicrobial Peptides
AMPLEShiny Apps to Support Capacity Building on Harvest Control Rules
AmpliconDuoStatistical Analysis of Amplicon Data of the Same Sample to Identify Artefacts
AMRAntimicrobial Resistance Data Analysis
AmyloGramPrediction of Amyloid Proteins
AnaCoDaAnalysis of Codon Data under Stationarity using a Bayesian Framework
anacorSimple and Canonical Correspondence Analysis
analogseaInterface to 'Digital Ocean'
analogueAnalogue and Weighted Averaging Methods for Palaeoecology
analogueExtraAdditional Functions for Use with the Analogue Package
analysisPipelinesCompose Interoperable Analysis Pipelines & Put Them in Production
analyzModel Layer for Automatic Data Analysis via CSV File Interpretation
AnalyzeFMRIFunctions for Analysis of fMRI Datasets Stored in the ANALYZE or NIFTI Format
analyzerData Analysis and Automated R Notebook Generation
anapuceTools for Microarray Data Analysis
AncestryMapperAssigning Ancestry Based on Population References
AnchorRegressionPerform AnchorRegression
anchorsStatistical analysis of surveys with anchoring vignettes
AnDEAn extended Bayesian Learning Technique developed by Dr. Geoff Webb
andrewsAndrews curves
AndromedaAsynchronous Disk-Based Representation of Massive Data
andurinhaMake Spectroscopic Data Processing Easier
anesrakeANES Raking Implementation
AnglerCreelSurveySimulationSimulate a Bus Route Creel Survey of Anglers
angstromsTools for 'ROMS' the Regional Ocean Modeling System
aniDomInferring Dominance Hierarchies and Estimating Uncertainty
anim.plotsSimple Animated Plots for R
animalEKFExtended Kalman Filters for Animal Movement
AnimalHabitatNetworkNetworks Characterising the Physical Configurations of Animal Habitats
animalTrackAnimal track reconstruction for high frequency 2-dimensional (2D) or 3-dimensional (3D) movement data
animaltrackerAnimal Tracker
animationA Gallery of Animations in Statistics and Utilities to Create Animations
animint2Animated Interactive Grammar of Graphics
anipathsAnimation of Multiple Trajectories with Uncertainty
aniviewAnimate Shiny and R Markdown Content when it Comes into View
anMCCompute High Dimensional Orthant Probabilities
ANN2Artificial Neural Networks for Anomaly Detection
anndata'anndata' for R
AnnoProbeAnnotate the Gene Symbols for Probes in Expression Array
AnnotationBustRExtract Subsequences from GenBank Annotations
AnnotListsAnnotLists: A tool to annotate multiple lists from a specific annotation file
AnnuityRIRAnnuity Random Interest Rates
anocvaA Non-Parametric Statistical Test to Compare Clustering Structures
ANOMAnalysis of Means
anomalizeTidy Anomaly Detection
anomalyDetecting Anomalies in Data
ANOVAIREVAInteractive Document for Working with Analysis of Variance
ANOVAreplicationTest ANOVA Replications by Means of the Prior Predictive p-Value
ANOVAShinyInteractive Document for Working with Analysis of Variance
ANOVAShiny2Interactive Document for Working with Analysis of Variance
anovirAnalysis of Virulence
anscombiserCreate Datasets with Identical Summary Statistics
AntAngioCOOLAnti-Angiogenic Peptide Prediction
antaresEditObjectEdit an 'Antares' Simulation
antaresProcessing'Antares' Results Processing
antaresReadImport, Manipulate and Explore the Results of an 'Antares' Simulation
antaresVizAntares Visualizations
anthroComputation of the WHO Child Growth Standards
anthroplusComputation of the WHO 2007 References for School-Age Children and Adolescents (5 to 19 Years)
AnthropMMDAn R Package for Smith's Mean Measure of Divergence (MMD)
AnthropometryStatistical Methods for Anthropometric Data
AntibodyTitersAntibody Titer Analysis of Vaccinated Patients
anticlustSubset Partitioning via Anticlustering
antitrustTools for Antitrust Practitioners
antiwordExtract Text from Microsoft Word Documents
AntMANAnthology of Mixture Analysis Tools
ANTsAnimal Network Toolkit Software
AntWebprogrammatic interface to the AntWeb
anybadgerCreate Custom Pipeline Badges
anyflightsQuery 'nycflights13'-Like Air Travel Data for Given Years and Airports
anyLibInstall and Load Any Package from CRAN, Bioconductor or Github
anytimeAnything to 'POSIXct' or 'Date' Converter
aoAlternating Optimization
aodAnalysis of Overdispersed Data
aods3Analysis of Overdispersed Data using S3 Methods
aofOntogenetic Shifts in Central-Place Foraging Insects
aoosAnother Object Orientation System
aopdataData from the 'Access to Opportunities Project (AOP)'
AoptbdtvcA-Optimal Block Designs for Comparing Test Treatments with Controls
aoristicGenerates Aoristic Probability Distributions
aosAnimate on Scroll Library for 'shiny'
AOV1RInference in the Balanced One-Way ANOVA Model with Random Factor
AovBayClassic, Nonparametric and Bayesian One-Way Analysis of Variance Panel
apaFormat Outputs of Statistical Tests According to APA Guidelines
apache.sedonaR Interface for Apache Sedona
ApacheLogProcessorProcess the Apache Web Server Log Files
apaTablesCreate American Psychological Association (APA) Style Tables
apaTextCreate R Markdown Text for Results in the Style of the American Psychological Association (APA)
APAtreeComputation of the 'Area Potentially Available' (APA) to Trees
apcAge-Period-Cohort Analysis
APCanalysisAnalysis of Unreplicated Orthogonal Experiments using All Possible Comparisons
apcfAdapted Pair Correlation Function
APCIA New Age-Period-Cohort Model for Describing and Investigating Inter-Cohort Differences and Life Course Dynamics
apclusterAffinity Propagation Clustering
aPCoACovariate Adjusted PCoA Plot
apdesignAn Implementation of the Additive Polynomial Design Matrix
apeAnalyses of Phylogenetics and Evolution
apercuQuick Look at your Data
apexPhylogenetic Methods for Multiple Gene Data
apexcharterCreate Interactive Chart with the JavaScript 'ApexCharts' Library
APFrMultiple Testing Approach using Average Power Function (APF) and Bayes FDR Robust Estimation
APfunGeo-Processing Helper Functions
aphidAnalysis with Profile Hidden Markov Models
APISAuto-Adaptive Parentage Inference Software Tolerant to Missing Parents
apisensrInterface to 'episensr' for Sensitivity Analysis of Epidemiological Results
aplore3Datasets from Hosmer, Lemeshow and Sturdivant, "Applied Logistic Regression" (3rd Ed., 2013)
aplotDecorate a 'ggplot' with Associated Information
aplpackAnother Plot Package: 'Bagplots', 'Iconplots', 'Summaryplots', Slider Functions and Others
APMLAn Approach for Machine-Learning Modelling
APML0Augmented and Penalized Minimization Method L0
apngConvert Png Files into Animated Png
apolloTools for Choice Model Estimation and Application
APPEstimationAdjusted Prediction Model Performance Estimation
appler'Apple App Store' and 'iTunes' Data Extraction
applicableA Compilation of Applicability Domain Methods
AppliedPredictiveModelingFunctions and Data Sets for 'Applied Predictive Modeling'
appnnAmyloid Propensity Prediction Neural Network
approximatorBayesian Prediction of Complex Computer Codes
approxmatchApproximately Optimal Fine Balance Matching with Multiple Groups
aprean3Datasets from Draper and Smith "Applied Regression Analysis" (3rd Ed., 1998)
apricomTools for the a Priori Comparison of Regression Modelling Strategies
aprofAmdahl's Profiler, Directed Optimization Made Easy
APSIMBatchAnalysis the output of Apsim software
apsimxInspect, Read, Edit and Run 'APSIM' "Next Generation" and 'APSIM' Classic
apsrtableapsrtable model-output formatter for social science
aptAsymmetric Price Transmission
APtoolsAverage Positive Predictive Values (AP) for Binary Outcomes and Censored Event Times
apTreeshapeAnalyses of Phylogenetic Treeshape
apyramidVisualize Population Pyramids Aggregated by Age
AQLSchemesRetrieving Acceptance Sampling Schemes
aqpAlgorithms for Quantitative Pedology
AQuadtreeConfidentiality of Spatial Point Data
AquaEnvIntegrated Development Toolbox for Aquatic Chemical Model Generation
aquodomAccess to Aquo domaintables from R (Dutch)
ARAnother Look at the Acceptance-Rejection Method
ar.matrixSimulate Auto Regressive Data from Precision Matricies
arabic2kansujiConvert Arabic Numerals to Kansuji
arabicStemRArabic Stemmer for Text Analysis
araknoARAchnid KNowledge Online
ArArReduxRigorous Data Reduction and Error Propagation of Ar40 / Ar39 Data
arcAssociation Rule Classification
ARCensRegFitting Univariate Censored Linear Regression Model with Autoregressive Errors
ArchaeoChronBayesian Modeling of Archaeological Chronologies
ArchaeoPhasesPost-Processing of the Markov Chain Simulated by 'ChronoModel', 'Oxcal' or 'BCal'
ArchaeoPhases.datasetData Sets for 'ArchaeoPhases' Vignettes
archdataExample Datasets from Archaeological Research
archeofragRefitting and Spatial Analysis in Archaeology
archetyperAn Archetype for Data Mining and Data Science Projects
archetypesArchetypal Analysis
aRchiQuantitative Structural Model ('QSM') Treatment for Tree Architecture
archiDARTPlant Root System Architecture Analysis Using DART and RSML Files
archiveMulti-Format Archive and Compression Support
archiveRetrieverRetrieve Archived Web Pages from the 'Internet Archive'
archivistTools for Storing, Restoring and Searching for R Objects
archivist.githubTools for Archiving, Managing and Sharing R Objects via GitHub
ArCoArtificial Counterfactual Package
ARCokrigAutoregressive Cokriging Models for Multifidelity Codes
arcosLoad ARCOS Prescription Data Prepared by the Washington Post
arcpullrPull Data from an 'ArcGIS REST' API
arctoolsProcessing and Physical Activity Summaries of Minute Level Activity Data
ArDecTime series autoregressive-based decomposition
ARDLARDL, ECM and Bounds-Test for Cointegration
areabiplotArea Biplot
arealAreal Weighted Interpolation
areaplotPlot Stacked Areas and Confidence Bands as Filled Polygons
arena2rPlots, Summary Statistics and Tools for Arena Simulation Users
arenarArena for the Exploration and Comparison of any ML Models
arfimaFractional ARIMA (and Other Long Memory) Time Series Modeling
argoAccurate Estimation of Influenza Epidemics using Google Search Data
argoFloatsAnalysis of Oceanographic Argo Floats
argon2Secure Password Hashing
argonDashArgon Shiny Dashboard Template
argonRR Interface to Argon HTML Design
argosfilterArgos locations filter
argparseCommand Line Optional and Positional Argument Parser
argparserCommand-Line Argument Parser
ARHTAdaptable Regularized Hotelling's T^2 Test for High-Dimensional Data
ariAutomated R Instructor
ARIbrainAll-Resolution Inference
aricodeEfficient Computations of Standard Clustering Comparison Measures
ariExtraTools for Creating Automated Courses
arkdbArchive and Unarchive Databases Using Flat Files
arkheRepresentation of Archaeological Data
armData Analysis Using Regression and Multilevel/Hierarchical Models
armadaA Statistical Methodology to Select Covariates in High-Dimensional Data under Dependence
armsppAdaptive Rejection Metropolis Sampling (ARMS) via 'Rcpp'
arnie"Arnie" box office records 1982-2014
AROCCovariate-Adjusted Receiver Operating Characteristic Curve Inference
aroma.affymetrixAnalysis of Large Affymetrix Microarray Data Sets
aroma.apdA Probe-Level Data File Format Used by 'aroma.affymetrix' [deprecated]
aroma.cnCopy-Number Analysis of Large Microarray Data Sets
aroma.coreCore Methods and Classes Used by 'aroma.*' Packages Part of the Aroma Framework
ArothronGeometric Morphometric Methods and Virtual Anthropology Tools
ARPALDataRetrieving, Managing and Analysing Air Quality and Weather Data for Lombardy (Italy) using ARPA Lombardia Open Database
ARpLMECCensored Mixed-Effects Models with Different Correlation Structures
ARPobservationTools for Simulating Direct Behavioral Observation Recording Procedures Based on Alternating Renewal Processes
arprAdvanced R Pipes
aRpsDCAArps Decline Curve Analysis in R
arrangementsFast Generators and Iterators for Permutations, Combinations, Integer Partitions and Compositions
arrApplyApply a Function to a Margin of an Array
arrayhelpersConvenience Functions for Arrays
arrowIntegration to 'Apache' 'Arrow'
arsAdaptive Rejection Sampling
arseArea of Resilience to Stress Event
arsenalAn Arsenal of 'R' Functions for Large-Scale Statistical Summaries
ARTAligned Rank Transform for Nonparametric Factorial Analysis
artfimaARTFIMA Model Estimation
ARTofRWho Ever Care About the [Art of R] Scripts?
ARToolAligned Rank Transform
ARTP2Pathway and Gene-Level Association Test
aRtsyGenerative Art with 'ggplot2'
arulesMining Association Rules and Frequent Itemsets
arulesCBAClassification Based on Association Rules
arulesNBMinerMining NB-Frequent Itemsets and NB-Precise Rules
arulesSequencesMining Frequent Sequences
arulesVizVisualizing Association Rules and Frequent Itemsets
aRxivInterface to the arXiv API
asaurData Sets for "Applied Survival Analysis Using R""
asbioA Collection of Statistical Tools for Biologists
asciiExport R Objects to Several Markup Languages
asciicastCreate 'Ascii' Screen Casts from R Scripts
asciichartrLightweight ASCII Line Graphs
asciirulerRender an ASCII Ruler
asciiSetupReaderReads Fixed-Width ASCII Data Files (.txt or .dat) that Have Accompanying Setup Files (.sps or .sas)
asdSimulations for Adaptive Seamless Designs
asdreaderReading ASD Binary Files in R
ASGS.foyerInterface to the Australian Statistical Geography Standard
ashDavid Scott's ASH Routines
ashrMethods for Adaptive Shrinkage, using Empirical Bayes
ashtApplied Statistical Hypothesis Tests
AsioHeaders'Asio' C++ Header Files
ASIPAutomated Satellite Image Processing
askpassSafe Password Entry for R, Git, and SSH
aslibInterface to the Algorithm Selection Benchmark Library
ASMapLinkage Map Construction using the MSTmap Algorithm
asnipeAnimal Social Network Inference and Permutations for Ecologists
ASPBayBayesian Inference on Causal Genetic Variants using Affected Sib-Pairs Data
aSPCAn Adaptive Sum of Powered Correlation Test (aSPC) for Global Association Between Two Random Vectors
aspectA General Framework for Multivariate Analysis with Optimal Scaling
aspiAnalysis of Symmetry of Parasitic Infections
aSPUAdaptive Sum of Powered Score Test
asremlPlusAugments 'ASReml-R' in Fitting Mixed Models and Packages Generally in Exploring Prediction Differences
ASSAApplied Singular Spectrum Analysis (ASSA)
assemblerrAssembly of Pharmacometric Models
assertValidate Function Arguments
assertableVerbose Assertions for Tabular Data (Data.frames and Data.tables)
assertiveReadable Check Functions to Ensure Code Integrity
assertive.baseA Lightweight Core of the 'assertive' Package
assertive.codeAssertions to Check Properties of Code
assertive.dataAssertions to Check Properties of Data
assertive.data.ukAssertions to Check Properties of Strings
assertive.data.usAssertions to Check Properties of Strings
assertive.datetimesAssertions to Check Properties of Dates and Times
assertive.filesAssertions to Check Properties of Files
assertive.matricesAssertions to Check Properties of Matrices
assertive.modelsAssertions to Check Properties of Models
assertive.numbersAssertions to Check Properties of Numbers
assertive.propertiesAssertions to Check Properties of Variables
assertive.reflectionAssertions for Checking the State of R
assertive.setsAssertions to Check Properties of Sets
assertive.stringsAssertions to Check Properties of Strings
assertive.typesAssertions to Check Types of Variables
assertrAssertive Programming for R Analysis Pipelines
assertthatEasy Pre and Post Assertions
AssetCorrEstimating Asset Correlations from Default Data
AssetPricingOptimal Pricing of Assets with Fixed Expiry Date
assignPOPPopulation Assignment using Genetic, Non-Genetic or Integrated Data in a Machine Learning Framework
assignRInfer Geographic Origin from Isotopic Data
assistA Suite of R Functions Implementing Spline Smoothing Techniques
ASSISTantAdaptive Subgroup Selection in Group Sequential Trials
AssocAFCAllele Frequency Comparison
assocIndImplements New and Existing Association Indices for Constructing Animal Social Networks
ASSOCShinyInteractive Document for Working with Association Rule Mining Analysis
AssocTestsGenetic Association Studies
assortnetCalculate the Assortativity Coefficient of Weighted and Binary Networks
AssotesteRStatistical Tests for Genetic Association Studies
ASTAge-Spatial-Temporal Model
asterAster Models
aster2Aster Models
asteRiskComputation of Satellite Position
AsthmaNHANESAsthma Data Sets from NHANES
astrochronA Computational Tool for Astrochronology
astrodatRAstronomical Data
astroFnsAstronomy: time and position functions, misc. utilities
astrolibRAstronomy Users Library
astsaApplied Statistical Time Series Analysis
asusAdaptive SURE Thresholding Using Side Information
asVPCAverage Shifted Visual Predictive Checks
AsyKKernel Density Estimation and Selection of Optimum Bandwidth
asylumData on Asylum and Resettlement for the UK
asymLDAsymmetric Linkage Disequilibrium (ALD) for Polymorphic Genetic Data
asymmetryMultidimensional Scaling of Asymmetric Data
asymmetry.measuresAsymmetry Measures for Probability Density Functions
asympTestA Simple R Package for Classical Parametric Statistical Tests and Confidence Intervals in Large Samples
asymptorEstimate Asymptomatic Cases via Capture/Recapture Methods
AsynchLongRegression Analysis of Sparse Asynchronous Longitudinal Data
asypowCalculate Power Utilizing Asymptotic Likelihood Ratio Methods
ataAutomated Test Assembly
atableCreate Tables for Reporting Clinical Trials
ATAforecastingAutomatic Time Series Analysis and Forecasting Using the Ata Method
atakrigArea-to-Area Kriging
ATboundsBounding Treatment Effects by Limited Information Pooling
ATEInference for Average Treatment Effects using Covariate Balancing
atlasStanford 'ATLAS' Search Engine API
AtmChileDownload Air Quality and Meteorological Information of Chile
atmcmcAutomatically Tuned Markov Chain Monte Carlo
ATmetAdvanced Tools for Metrology
AtmRayAcoustic Traveltime Calculations for 1-D Atmospheric Models
ATRAlternative Tree Representation
aTSAAlternative Time Series Analysis
atsdSupport Querying Axibase Time-Series Database
attachmentDeal with Dependencies
attemptTools for Defensive Programming
attenuationCorrecting for Attenuation Due to Measurement Error
attribAttributable Burden of Disease
AUCThreshold independent performance measures for probabilistic classifiers
aucmAUC Maximization
AUCRFVariable Selection with Random Forest and the Area Under the Curve
auctestrStatistical Testing for AUC Data
auctionrEstimate First-Price Auction Model
audioAudio Interface for R
audiolyzRaudiolyzR: Give your data a listen
audiometryStandard Conform Pure Tone Audiometry (PTA) Plots
auditBounds for Accounting Populations
auditorModel Audit - Verification, Validation, and Error Analysis
audrexAutomatic Dynamic Regression using Extreme Gradient Boosting
augmentedRCBDAnalysis of Augmented Randomised Complete Block Designs
AugmenterRData Augmentation for Machine Learning on Tabular Data
augSIMEXAnalysis of Data with Mixed Measurement Error and Misclassification in Covariates
aukeBird Data Extraction and Processing in R
aureliusGenerates PFA Documents from R Code and Optionally Runs Them
AurieLSHGaussianCreates a Neighbourhood Using Locality Sensitive Hashing for Gaussian Projections
auRocVarious Methods to Estimate the AUC
ausplotsRTERN AusPlots Analysis Package
AUtestsApproximate Unconditional and Permutation Tests
auth0Secure Authentication in Shiny with Auth0
auto.pcaAutomatic Variable Reduction Using Principal Component Analysis
autoBaggingLearning to Rank Bagging Workflows with Metalearning
autocartAutocorrelation Regression Trees
autocogsAutomatic Cognostic Summaries
autoCovariateSelectionAutomated Covariate Selection Using HDPS Algorithm
AutoDeskRAn Interface to the 'AutoDesk' 'API' Platform
autoencoderSparse Autoencoder for Automatic Learning of Representative Features from Unlabeled Data
autoFCAutomatic Construction of Forced-Choice Tests
autoFRKAutomatic Fixed Rank Kriging
autoharpSemi-Automatic Grading of R and Rmd Scripts
autohdHigh Dimensional Bayesian Survival Mediation Analysis
autoimageMultiple Heat Maps for Projected Coordinates
autokerasR Interface to 'AutoKeras'
automagicAutomagically Document and Install Packages Necessary to Run R Code
automapAutomatic interpolation package
autoMFAAlgorithms for Automatically Fitting MFA Models
automlDeep Learning with Metaheuristic
autoMrPImproving MrP with Ensemble Learning
AutoPipeAutomated Transcriptome Classifier Pipeline: Comprehensive Transcriptome Analysis
autoplotlyAutomatic Generation of Interactive Visualizations for Statistical Results
AutoplotproteinDevelopment of Visualization Tools for Protein Sequence
AutoregressionMDEMinimum Distance Estimation in Autoregressive Model
AutoScoreAn Interpretable Machine Learning-Based Automatic Clinical Score Generator
AutoSEARCHGeneral-to-Specific (GETS) Modelling
AutoseedRetrieve Disease-Related Genes from Public Sources
autoshinyAutomatic Transformation of an 'R' Function into a 'shiny' App
autostatsAuto Stats
AutoStepwiseGLMBuilds Stepwise GLMs via Train and Test Approach
autostsmAutomatic Structural Time Series Models
autothresholdrAn R Port of the 'ImageJ' Plugin 'Auto Threshold'
autoTSAutomatic Model Selection and Prediction for Univariate Time Series
avWorking with Audio and Video in R
availableCheck if the Title of a Package is Available, Appropriate and Interesting
avarAllan Variance
averiskCalculation of Average Population Attributable Fractions and Confidence Intervals
AvInertiaCalculate the Inertial Properties of a Flying Bird
aVirtualTwinsAdaptation of Virtual Twins Method from Jared Foster
avocadoWeekly Hass Avocado Sales Summary
AWAPerCatchment Area Weighted Climate Data Anywhere in Australia
aweekConvert Dates to Arbitrary Week Definitions
aweSOMInteractive Self-Organizing Maps
AWR'AWS' Java 'SDK' for R
AWR.Athena'AWS' Athena 'DBI' Wrapper
AWR.KinesisAmazon 'Kinesis' Consumer Application for Stream Processing
AWR.KMSA Simple Client to the 'AWS' Key Management Service
awsAdaptive Weights Smoothing
aws.alexaClient for the Amazon Alexa Web Information Services API
aws.comprehendClient for 'AWS Comprehend'
aws.ec2metadataGet EC2 Instance Metadata
aws.ecxCommunicating with AWS EC2 and ECS using AWS REST APIs
aws.iamAWS IAM Client Package
aws.kms'AWS Key Management Service' Client Package
aws.lambdaAWS Lambda Client Package
aws.pollyClient for AWS Polly
aws.s3'AWS S3' Client Package
aws.signatureAmazon Web Services Request Signatures
aws.transcribeClient for 'AWS Transcribe'
aws.translateClient for 'AWS Translate'
awsMethodsClass and Methods Definitions for Packages 'aws', 'adimpro', 'fmri', 'dwi'
aziztestNovel Statistical Test for Aberration Enrichment
AzureAppInsightsInclude Azure Application Insights in Shiny Apps
AzureAuthAuthentication Services for Azure Active Directory
AzureCognitiveInterface to Azure Cognitive Services
AzureContainersInterface to 'Container Instances', 'Docker Registry' and 'Kubernetes' in 'Azure'
AzureCosmosRInterface to the 'Azure Cosmos DB' 'NoSQL' Database Service
AzureGraphSimple Interface to 'Microsoft Graph'
AzureKeyVaultKey and Secret Management in 'Azure'
AzureKustoInterface to 'Kusto'/'Azure Data Explorer'
azuremlsdkInterface to the 'Azure Machine Learning' 'SDK'
AzureQstorInterface to 'Azure Queue Storage'
AzureRMRInterface to 'Azure Resource Manager'
AzureStorStorage Management in 'Azure'
AzureTableStorInterface to the Table Storage Service in 'Azure'
AzureVisionInterface to Azure Computer Vision Services
AzureVMVirtual Machines in 'Azure'
AzureVMmetadataInterface to Azure Virtual Machine Instance Metadata
b6e6rlAdaptive differential evolution, b6e6rl variant
babarBayesian Bacterial Growth Curve Analysis in R
babelRibosome Profiling Data Analysis
babelgeneGene Orthologs for Model Organisms in a Tidy Data Format
babelwhaleTalking to 'Docker' and 'Singularity' Containers
babetteControl 'BEAST2'
BaBooNBayesian Bootstrap Predictive Mean Matching - Multiple and Single Imputation for Discrete Data
babsim.hospitalBartz & Bartz Simulation Hospital
babynamesUS Baby Names 1880-2017
BacArenaModeling Framework for Cellular Communities in their Environments
BACCOBayesian Analysis of Computer Code Output (BACCO)
BACCTBayesian Augmented Control for Clinical Trials
bacistoolBayesian Classification and Information Sharing (BaCIS) Tool for the Design of Multi-Group Phase II Clinical Trials
backboneExtracts the Backbone from Weighted Graphs
backpipeBackward Pipe (Right-to-Left) Operator
backportsReimplementations of Functions Introduced Since R-3.0.0
backShiftLearning Causal Cyclic Graphs from Unknown Shift Interventions
backtestExploring Portfolio-Based Conjectures About Financial Instruments
bacondecompGoodman-Bacon Decomposition
BACpriorChoice of the Hyperparameter Omega in the Bayesian Adjustment for Confounding (BAC) Algorithm
bacrBayesian Adjustment for Confounding
badgecreatrCreate Badges for 'Travis', 'Repostatus' 'Codecov.io' Etc in Github Readme
badgerBadge for R Package
BAEssdBayesian Average Error approach to Sample Size Determination
bagged.outliertreesRobust Explainable Outlier Detection Based on OutlierTree
baggedcvBagged Cross-Validation for Kernel Density Bandwidth Selection
baggingbwselBagging Bandwidth Selection in Kernel Density and Regression Estimation
baggrBayesian Aggregate Treatment Effects
BAGofTA Binary Regression Adaptive Goodness-of-Fit Test (BAGofT)
baguetteEfficient Model Functions for Bagging
bahcFilter Covariance and Correlation Matrices with Bootstrapped-Averaged Hierarchical Ansatz
bainBayes Factors for Informative Hypotheses
BalanceCheckBalance Check for Multiple Covariates in Matched Observational Studies
BalancedSamplingBalanced and Spatially Balanced Sampling
BALCONYBetter ALignment CONsensus analYsis
BallStatistical Inference and Sure Independence Screening via Ball Statistics
BALLIExpression RNA-Seq Data Analysis Based on Linear Mixed Model
BallMapperThe Ball Mapper Algorithm
BaMFunctions and Datasets for "Bayesian Methods: A Social and Behavioral Sciences Approach"
bamaHigh Dimensional Bayesian Mediation Analysis
BAMBIBivariate Angular Mixture Models
bambooProtein Secondary Structure Prediction Using the Bamboo Method
bamditBayesian Meta-Analysis of Diagnostic Test Data
bamlssBayesian Additive Models for Location, Scale, and Shape (and Beyond)
BAMMtoolsAnalysis and Visualization of Macroevolutionary Dynamics on Phylogenetic Trees
bampBayesian Age-Period-Cohort Modeling and Prediction
banditFunctions for simple A/B split test and multi-armed bandit analysis
bangBayesian Analysis, No Gibbs
bannerCommenterMake Banner Comments with a Consistent Format
BANOVAHierarchical Bayesian ANOVA Models
banterBioAcoustic EveNT ClassifiER
banxicoRDownload Data from the Bank of Mexico
bapredBatch Effect Removal and Addon Normalization (in Phenotype Prediction using Gene Data)
BaPreStoProBayesian Prediction of Stochastic Processes
BarBorGradientFunction Minimum Approximator
barcodeBarcode distribution plots
baRcodeRLabel Creation for Tracking and Collecting Data from Biological Samples
BarcodingRSpecies Identification using DNA Barcodes
bardrComplete Works of William Shakespeare in Tidy Format
BARISAccess and Import Data from the French Open Data Portal
BarnardBarnard's Unconditional Test
barplot3dCreate 3D Barplots
BARTBayesian Additive Regression Trees
bartBMABayesian Additive Regression Trees using Bayesian Model Averaging
bartCauseCausal Inference using Bayesian Additive Regression Trees
bartMachineBayesian Additive Regression Trees
bartMachineJARsbartMachine JARs
baRulhoQuantifying Habitat-Induced Acoustic Signal Degradation
BarycenterRegularized Wasserstein Distances and Barycenters
BASBayesian Variable Selection and Model Averaging using Bayesian Adaptive Sampling
basadBayesian Variable Selection with Shrinking and Diffusing Priors
base.rmsConvert Regression Between Base Function and 'rms' Package
base64Base64 Encoder and Decoder
base64encTools for base64 encoding
base64urlFast and URL-Safe Base64 Encoder and Decoder
baseballDBRSabermetrics and Advanced Baseball Statistics
basecambUtilities for Streamlined Data Import, Imputation and Modelling
basedosdados'Base Dos Dados' R Client
baseflowComputes Hydrograph Separation
basefunInfrastructure for Computing with Basis Functions
baselineBaseline Correction of Spectra
basemapsAccessing Spatial Basemaps in R
BaseSetWorking with Sets the Tidy Way
basethemeThemes for Base Graphics Plots
basfPlot Simple Features with 'base' Sensibilities
basicMCMCplotsTrace Plots, Density Plots and Chain Comparisons for MCMC Samples
basicspaceRecovering a Basic Space from Issue Scales
basictablerConstruct Rich Tables for Output to 'HTML'/'Excel'
basicTrendlineAdd Trendline and Confidence Interval of Basic Regression Models to Plot
basifoRRetrieval and Processing of the Spanish National Forest Inventory
BASiNETClassification of RNA Sequences using Complex Network Theory
BASIXBASIX: An efficient C/C++ toolset for R
basketBasket Trial Analysis
BasketballAnalyzeRAnalysis and Visualization of Basketball Data
baskexactExact Calculation of Basket Trial Operating Characteristics
BASSBayesian Adaptive Spline Surfaces
BaSTAAge-Specific Survival Analysis from Incomplete Capture-Recapture/Recovery Data
bastahBig Data Statistical Analysis for High-Dimensional Models
BATBiodiversity Assessment Tools
batataManaging Packages Removal and Installation
batchBatching Routines in Parallel and Passing Command-Line Arguments to R
BatchExperimentsStatistical Experiments on Batch Computing Clusters
BatchGetSymbolsDownloads and Organizes Financial Data for Multiple Tickers
BatchJobsBatch Computing with R
batchmeansConsistent Batch Means Estimation of Monte Carlo Standard Errors
batchscrBatch Script Helpers
batchtoolsTools for Computation on Batch Systems
batmanConvert Categorical Representations of Logicals to Actual Logicals
batteryreductionAn R Package for Data Reduction by Battery Reduction
BAwiRAnalysis of Basketball Data
baycnBayesian Inference for Causal Networks
bayefdrBayesian Estimation and Optimisation of Expected False Discovery Rate
bayes4psyUser Friendly Bayesian Data Analysis for Psychology
bayesABFast Bayesian Methods for AB Testing
bayesammiBayesian Estimation of the Additive Main Effects and Multiplicative Interaction Model
bayesanovaBayesian Inference in the Analysis of Variance via Markov Chain Monte Carlo in Gaussian Mixture Models
BayesARIMAXBayesian Estimation of ARIMAX Model
BayesBEKKBayesian Estimation of Bivariate Volatility Model
BayesBinMixBayesian Estimation of Mixtures of Multivariate Bernoulli Distributions
bayesbioMiscellaneous Functions for Bioinformatics and Bayesian Statistics
bayesbootAn Implementation of Rubin's (1981) Bayesian Bootstrap
BayesBPBayesian Estimation using Bernstein Polynomial Fits Rate Matrix
bayesbrBeta Regression on a Bayesian Model
BayesCACEBayesian Model for CACE Analysis
BayesComboBayesian Evidence Combination
BayesCommBayesian Community Ecology Analysis
bayescopularegBayesian Copula Regression
bayescountPower Calculations and Bayesian Analysis of Count Distributions and FECRT Data using MCMC
BayesCRBayesian Analysis of Censored Regression Models Under Scale Mixture of Skew Normal Distributions
bayesCTSimulation and Analysis of Adaptive Bayesian Clinical Trials
BayesCTDesignTwo Arm Bayesian Clinical Trial Design with and Without Historical Control Data
BayesDAFunctions and Datasets for the book "Bayesian Data Analysis"
bayesDccGarchMethods and Tools for Bayesian Dynamic Conditional Correlation GARCH(1,1) Model
BayesDesignBayesian Single-Arm Design with Survival Endpoints
bayesdfaBayesian Dynamic Factor Analysis (DFA) with 'Stan'
bayesdistregBayesian Distribution Regression
bayesDPImplementation of the Bayesian Discount Prior Approach for Clinical Trials
BayesESSDetermining Effective Sample Size
BayesFactorComputation of Bayes Factors for Common Designs
BayesFMBayesian Inference for Factor Modeling
bayesforecastBayesian Time Series Modeling with Stan
bayesGAMFit Multivariate Response Generalized Additive Models using Hamiltonian Monte Carlo
bayesGARCHBayesian Estimation of the GARCH(1,1) Model with Student-t Innovations
BayesGESMBayesian Analysis of Generalized Elliptical Semi-Parametric Models and Flexible Measurement Error Models
BayesGOFBayesian Modeling via Frequentist Goodness-of-Fit
BayesGPfitFast Bayesian Gaussian Process Regression Fitting
BayesGWQSBayesian Grouped Weighted Quantile Sum Regression
bayesianBindings for Bayesian TidyModels
BayesianAnimalTrackerBayesian Melding of GPS and DR Path for Animal Tracking
bayesianETASBayesian Estimation of the ETAS Model for Earthquake Occurrences
BayesianFROCFROC Analysis by Bayesian Approaches
BayesiangammaregBayesian Gamma Regression: Joint Mean and Shape Modeling
BayesianGLassoBayesian Graphical Lasso
BayesianLateralityPredict Brain Asymmetry Based on Handedness and Dichotic Listening
BayesianNetworkBayesian Network Modeling and Analysis
BayesianPowerSample Size and Power for Comparing Inequality Constrained Hypotheses
BayesianReasoningPlot Positive and Negative Predictive Values for Medical Tests
BayesianToolsGeneral-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics
bayesImageSBayesian Methods for Image Segmentation using a Potts Model
BayesLCABayesian Latent Class Analysis
bayesLifeBayesian Projection of Life Expectancy
bayeslincomLinear Combinations of Bayesian Posterior Samples
BayesLNBayesian Inference for Log-Normal Data
BayesLogitPolyaGamma Sampling
bayesloglinBayesian Analysis of Contingency Table Data
bayeslongitudinalAdjust Longitudinal Regression Models Using Bayesian Methodology
bayesmBayesian Inference for Marketing/Micro-Econometrics
BayesMallowsBayesian Preference Learning with the Mallows Rank Model
BayesMassBalBayesian Data Reconciliation of Separation Processes
bayesmetaBayesian Random-Effects Meta-Analysis
BayesMFSurvBayesian Misclassified-Failure Survival Model
bayesmixBayesian Mixture Models with JAGS
BayesMixSurvBayesian Mixture Survival Models using Additive Mixture-of-Weibull Hazards, with Lasso Shrinkage and Stratification
bayesmodelsThe 'Tidymodels' Extension for Bayesian Models
bayesmoveNon-Parametric Bayesian Analyses of Animal Movement
BayesMRABayesian Multi-Resolution Gaussian Process Approximations
bayesnecA Bayesian No-Effect- Concentration (NEC) Algorithm
BayesNetBPBayesian Network Belief Propagation
BayesNIBayesNI: Bayesian Testing Procedure for Noninferiority with Binary Endpoints
BayesNSGPBayesian Analysis of Non-Stationary Gaussian Process Models
BayesOrdDesignBayesian Group Sequential Design for Ordinal Data
BayesPieceHazSelectVariable Selection in a Hierarchical Bayesian Model for a Hazard Function
BayesPiecewiseICARHierarchical Bayesian Model for a Hazard Function
bayesplayThe Bayes Factor Playground
bayesplotPlotting for Bayesian Models
bayesPOBayesian Inference for Presence-Only Data
bayesPopProbabilistic Population Projection
BayesPostEstGenerate Postestimation Quantities for Bayesian MCMC Estimation
BayesPPDBayesian Power Prior Design
bayesprefHierarchical Bayesian analysis of ecological count data
BayesProjectFast Projection Direction for Multivariate Changepoint Detection
bayesQRBayesian Quantile Regression
bayesregBayesian Regression Models with Global-Local Shrinkage Priors
BayesrelBayesian Reliability Estimation
BayesReversePLLHFits the Bayesian Piecewise Linear Log-Hazard Model
BayesRGMMBayesian Robust Generalized Mixed Models for Longitudinal Data
BayesRSBayes Factors for Hierarchical Linear Models with Continuous Predictors
bayesrulesDatasets and Supplemental Functions from Bayes Rules! Book
bayessBayesian Essentials with R
BayesS5Bayesian Variable Selection Using Simplified Shotgun Stochastic Search with Screening (S5)
BayesSAEBayesian Analysis of Small Area Estimation
BayesSamplingBayes Linear Estimators for Finite Population
BayesSenMCDifferent Models of Posterior Distributions of Adjusted Odds Ratio
BayesSpecBayesian Spectral Analysis Techniques
BayesSPsurvBayesian Spatial Split Population Survival Model
BayesSummaryStatLMMCMC Sampling of Bayesian Linear Models via Summary Statistics
BayesSURBayesian Seemingly Unrelated Regression
bayesSurvBayesian Survival Regression with Flexible Error and Random Effects Distributions
BayesSurvivalBayesian Survival Analysis for Right Censored Data
bayestEffect Size Targeted Bayesian Two-Sample t-Tests via Markov Chain Monte Carlo in Gaussian Mixture Models
bayestestRUnderstand and Describe Bayesian Models and Posterior Distributions
bayesTFRBayesian Fertility Projection
BayesToolsTools for Bayesian Analyses
BayesTreeBayesian Additive Regression Trees
BayesTreePriorBayesian Tree Prior Simulation
BayesTwinBayesian Analysis of Item-Level Twin Data
BayesValidateBayesValidate Package
BayesVarSelBayes Factors, Model Choice and Variable Selection in Linear Models
bayesvlVisually Learning the Graphical Structure of Bayesian Networks and Performing MCMC with 'Stan'
BayesXR Utilities Accompanying the Software Package BayesX
BayesXsrcR Package Distribution of the BayesX C++ Sources
bayesZIBBayesian Zero-Inflated Bernoulli Regression Model
bayfoxrGlobal Bayesian Foraminifera Core Top Calibration
BayHazR Functions for Bayesian Hazard Rate Estimation
BayLumChronological Bayesian Models Integrating Optically Stimulated Luminescence and Radiocarbon Age Dating
baymedrComputation of Bayes Factors for Common Biomedical Designs
BaySICBayesian Analysis of Significantly Mutated Genes in Cancer
baystabilityBayesian Stability Analysis of Genotype by Environment Interaction (GEI)
BAYSTAROn Bayesian analysis of Threshold autoregressive model (BAYSTAR)
baytrendsLong Term Water Quality Trend Analysis
bazarMiscellaneous Basic Functions
BBSolving and Optimizing Large-Scale Nonlinear Systems
BBcorBayesian Bootstrapping Correlations
bbdetectionIdentification of Bull and Bear States of the Market
bbefkrBayesian bandwidth estimation and semi-metric selection for the functional kernel regression with unknown error density
bbemkrBayesian bandwidth estimation for multivariate kernel regression with Gaussian error
BBESTBayesian Estimation of Incoherent Neutron Scattering Backgrounds
BBIBenthic Biotic Indices Calculation from Composition Data
bblBoltzmann Bayes Learner
BBmiscMiscellaneous Helper Functions for B. Bischl
bbmleTools for General Maximum Likelihood Estimation
BBMMBrownian bridge movement model
BBMVModels for Continuous Traits Evolving in Macroevolutionary Landscapes of any Shape
bboBiogeography-Based Optimization
bbotkBlack-Box Optimization Toolkit
BBRecaptureBayesian Behavioural Capture-Recapture Models
bbregBessel and Beta Regressions via Expectation-Maximization Algorithm for Continuous Bounded Data
bbricksBayesian Methods and Graphical Model Structures for Statistical Modeling
bbsBayesHierarchical Bayesian Analysis of North American BBS Data
BBSSLBayesian Bootstrap Spike-and-Slab LASSO
bbwBlocked Weighted Bootstrap
bc3netGene Regulatory Network Inference with Bc3net
BCA1SGBlock Coordinate Ascent with One-Step Generalized Rosen Algorithm
bcabootBias Corrected Bootstrap Confidence Intervals
BCBCSFBias-Corrected Bayesian Classification with Selected Features
bccBeta Control Charts
BCC1997Calculation of Option Prices Based on a Universal Solution
bccpBias Correction under Censoring Plan
bcdataSearch and Retrieve Data from the BC Data Catalogue
BCDatingBusiness Cycle Dating and Plotting Tools
BcDiagDiagnostics Plots for Bicluster Data
BCEBayesian composition estimator: estimating sample (taxonomic) composition from biomarker data
BCEABayesian Cost Effectiveness Analysis
BCEEThe Bayesian Causal Effect Estimation Algorithm
BCellMAB Cell Receptor Somatic Hyper Mutation Analysis
bcfCausal Inference for a Binary Treatment and Continuous Outcome using Bayesian Causal Forests
bcfrailphSemiparametric Bivariate Correlated Frailty Model
bcfrailphdvBivariate Correlated Frailty Models with Varied Variances
bcgamBayesian Constrained Generalised Linear Models
BCgeeBias-Corrected Estimates for Generalized Linear Models for Dependent Data
BCHMClinical Trial Calculation Based on BCHM Design
BchronRadiocarbon Dating, Age-Depth Modelling, Relative Sea Level Rate Estimation, and Non-Parametric Phase Modelling
BClustLonGA Dirichlet Process Mixture Model for Clustering Longitudinal Gene Expression Data
bcmapsMap Layers and Spatial Utilities for British Columbia
bcmixedMixed Effect Model with the Box-Cox Transformation
bcpBayesian Analysis of Change Point Problems
bcpaBehavioral change point analysis of animal movement
bcpmetaBayesian Multiple Changepoint Detection Using Metadata
bcputilityWrapper for SQL Server bcp Utility
BCRABreast Cancer Risk Assessment
bcrmBayesian Continual Reassessment Method for Phase I Dose-Escalation Trials
bcROCsurfaceBias-Corrected Methods for Estimating the ROC Surface of Continuous Diagnostic Tests
bcrypt'Blowfish' Password Hashing Algorithm
BCSubA Bayesian Semiparametric Factor Analysis Model for Subtype Identification (Clustering)
BCTBayesian Context Trees for Discrete Time Series
bcTSNEProjected t-SNE for Batch Correction
bcvCross-Validation for the SVD (Bi-Cross-Validation)
bdaBinned Data Analysis
bdchecksBiodiversity Data Checks
bdcleanA User-Friendly Biodiversity Data Cleaning App for the Inexperienced R User
bdDwCDarwinizer: Darwin Core (DwC) Field Names Standardization
bdeBounded Density Estimation
BDEsizeEfficient Determination of Sample Size in Balanced Design of Experiments
BDgraphBayesian Structure Learning in Graphical Models using Birth-Death MCMC
bdlInterface and Tools for 'BDL' API
bdlpTransparent and Reproducible Artificial Data Generation
bdotsBootstrapped Differences of Time Series
BDP2Bayesian Adaptive Designs for Phase II Trials with Binary Endpoint
bdparBig Data Preprocessing Architecture
bdpoptOptimisation of Bayesian Decision Problems
bdpvInference and Design for Predictive Values in Diagnostic Tests
bdrcBayesian Discharge Rating Curves
bdribsBayesian Detection of Potential Risk Using Inference on Blinded Safety Data
bdscaleRemove Weekends and Holidays from ggplot2 Axes
bdsmatrixRoutines for Block Diagonal Symmetric Matrices
bdvisBiodiversity Data Visualizations
BDWregBayesian Inference for Discrete Weibull Regression
bdynsysBayesian Dynamical System Model
BEBioequivalence Study Data Analysis
bea.RBureau of Economic Analysis API
BEACHBiometric Exploratory Analysis Creation House
beadarrayFilterBead filtering for Illumina bead arrays
beadplexrAnalysis of Multiplex Cytometric Bead Assays
beakrA Minimalist Web Framework for R
beamFast Bayesian Inference in Large Gaussian Graphical Models
beanplotVisualization via Beanplots (like Boxplot/Stripchart/Violin Plot)
beansData on Dried Beans
beanzBayesian Analysis of Heterogeneous Treatment Effect
beastBayesian Estimation of Change-Points in the Slope of Multivariate Time-Series
beastierCall 'BEAST2'
BeastJarJAR Dependency for MCMC Using 'BEAST'
beautier'BEAUti' from R
BEDBiological Entity Dictionary (BED)
BEDASSLEQuantifies effects of geo/eco distance on genetic differentiation
BEDMatrixExtract Genotypes from a PLINK .bed File
bedrGenomic Region Processing using Tools Such as 'BEDTools', 'BEDOPS' and 'Tabix'
beeprEasily Play Notification Sounds on any Platform
beeswarmThe Bee Swarm Plot, an Alternative to Stripchart
beezdemandBehavioral Economic Easy Demand
befprojMakes a Local Population Projection
beginrFunctions for R Beginners
behaviorchangeTools for Behavior Change Researchers and Professionals
behavrCanonical Data Structure for Behavioural Data
belexDownload Historical Data from the Belgrade Stock Exchange
belgBoltzmann Entropy of a Landscape Gradient
bellregCount Regression Models Based on the Bell Distribution
benchHigh Precision Timing of R Expressions
benchden28 benchmark densities from Berlinet/Devroye (1994)
BenchmarkingBenchmark and Frontier Analysis Using DEA and SFA
benchmarkmeCrowd Sourced System Benchmarks
benchmarkmeDataData Set for the 'benchmarkme' Package
benchrHigh Precise Measurement of R Expressions Execution Time
benderBender Client
benfordBenford's Analysis on Large Data Sets
benford.analysisBenford Analysis for Data Validation and Forensic Analytics
BenfordTestsStatistical Tests for Evaluating Conformity to Benford's Law
BENMMIBenthic Multi-Metric Index
bentcableARBent-Cable Regression for Independent Data or Autoregressive Time Series
benthosMarine Benthic Ecosystem Analysis
BergmBayesian Exponential Random Graph Models
berryFunctionsFunction Collection Related to Plotting and Hydrology
BeSSBest Subset Selection in Linear, Logistic and CoxPH Models
BesselComputations and Approximations for Bessel Functions
BESTBayesian Estimation Supersedes the t-Test
bestglmBest Subset GLM and Regression Utilities
BestieBayesian Estimation of Intervention Effects
bestNormalizeNormalizing Transformation Functions
BESTreeBranch-Exclusive Splits Trees
bestridgeA Comprehensive R Package for Best Subset Selection
bestSDPBurden Estimate of Common Communicable Diseases in Settlements of Displaced Populations
BETBinary Expansion Testing
betaBayesBayesian Beta Regression
BetaBitMini Games from Adventures of Beta and Bit
betaboostBoosting Beta Regression
betacalBeta Calibration
betafamDetecting rare variants for quantitative traits using nuclear families
betafunctionsFunctions for Working with Two- And Four-Parameter Beta Probability Distributions
betalinkBeta-Diversity of Species Interactions
betapartPartitioning Beta Diversity into Turnover and Nestedness Components
BetaPASSCalculate Power and Sample Size with Beta Regression
betaperTaxonomic Uncertainty on Multivariate Analyses of Ecological Data
betaregBeta Regression
betategarchSimulation, Estimation and Forecasting of Beta-Skew-t-EGARCH Models
bethelBethel's algorithm
BETSBrazilian Economic Time Series
bets.covid19The BETS Model for Early Epidemic Data
bettermcEnhanced Fork-Based Parallelization
BeviMedBayesian Evaluation of Variant Involvement in Mendelian Disease
BeyondBenfordCompare the Goodness of Fit of Benford's and Blondeau Da Silva's Digit Distributions to a Given Dataset
beyondWhittleBayesian Spectral Inference for Stationary Time Series
bezierToolkit for Bezier Curves and Splines
bfastBreaks for Additive Season and Trend
bfpBayesian Fractional Polynomials
BFpackFlexible Bayes Factor Testing of Scientific Expectations
BFSSearch and Download Data from the Swiss Federal Statistical Office (BFS)
bfslBest-Fit Straight Line
bfsMapsPlot Maps from Switzerland by Swiss Federal Statistical Office
bfwBayesian Framework for Computational Modeling
BGDataA Suite of Packages for Analysis of Big Genomic Data
bgevaBinary Generalized Extreme Value Additive Models
bggAnalyticsBoardGameGeek's Board Game Data Analysis Tools
BGGEBayesian Genomic Linear Models Applied to GE Genome Selection
BGGMBayesian Gaussian Graphical Models
bggumBayesian Estimation of Generalized Graded Unfolding Model Parameters
BGLRBayesian Generalized Linear Regression
bgmfilesExample BGM Files for the Atlantis Ecosystem Model
BGmiscBehavior Genetic Modeling Functions
bgmmGaussian Mixture Modeling Algorithms and the Belief-Based Mixture Modeling
BGSIMDBlock Gibbs Sampler with Incomplete Multinomial Distribution
bgsmtrBayesian Group Sparse Multi-Task Regression
bgumbelBimodal Gumbel Distribution
BGVARBayesian Global Vector Autoregressions
BHBoost C++ Header Files
BHAIEstimate the Burden of Healthcare-Associated Infections
BhatGeneral likelihood exploration
BHH2Useful Functions for Box, Hunter and Hunter II
bhmBiomarker Threshold Models
bhmbasketBayesian Hierarchical Models for Basket Trials
BHMSMAfMRIBayesian Hierarchical Multi-Subject Multiscale Analysis of Functional MRI Data
bhpmBayesian Hierarchical Poisson Models for Multiple Grouped Outcomes with Clustering
BHSBVARStructural Bayesian Vector Autoregression Models
BHTSpackBayesian Multi-Plate High-Throughput Screening of Compounds
BIBlinding Assessment Indexes for Randomized, Controlled, Clinical Trials
biasbetaregBias correction of the parameter estimates of the beta regression model
BiasCorrectorA GUI to Correct Measurement Bias in DNA Methylation Analyses
BiasedUrnBiased Urn Model Distributions
bib2dfParse a BibTeX File to a Data Frame
BiBitRR Wrapper for Java Implementation of BiBit
biblioInteracting with BibTeX Databases
bibliometrixComprehensive Science Mapping Analysis
bibliometrixDataBibliometrix Example Datasets
biblionetworkCreate Different Types of Bibliometric Networks
BibPlotsPlot Functions for Use in Bibliometrics
bibtexBibtex Parser
biClassifyBinary Classification Using Extensions of Discriminant Analysis
bicliqueMaximal Biclique Enumeration in Bipartite Graphs
biclustBiCluster Algorithms
biclustermdBiclustering with Missing Data
BICORNIntegrative Inference of De Novo Cis-Regulatory Modules
BiDAGBayesian Inference for Directed Acyclic Graphs
bidaskEfficient Estimation of Bid-Ask Spreads from Open, High, Low, and Close Prices
BiDimRegressionCalculates the Bidimensional Regression Between Two 2D Configurations
BIENTools for Accessing the Botanical Information and Ecology Network Database
BifactorIndicesCalculatorBifactor Indices Calculator
bifeBinary Choice Models with Fixed Effects
BIFIEsurveyTools for Survey Statistics in Educational Assessment
bifurcatingrBifurcating Autoregressive Models
bigalgebra'BLAS' and 'LAPACK' Routines for Native R Matrices and 'big.matrix' Objects
biganalyticsUtilities for 'big.matrix' Objects from Package 'bigmemory'
bigassertrAssertion and Message Functions
bigchessRead, Write, Manipulate, Explore Chess PGN Files and R API to UCI Chess Engines
bigdatadistDistances for Machine Learning and Statistics in the Context of Big Data
BIGDAWGCase-Control Analysis of Multi-Allelic Loci
bigdistStore Distance Matrices on Disk
bigGPDistributed Gaussian Process Calculations
BIGLBiochemically Intuitive Generalized Loewe Model
biglassoExtending Lasso Model Fitting to Big Data
bigleafPhysical and Physiological Ecosystem Properties from Eddy Covariance Data
biglmBounded Memory Linear and Generalized Linear Models
biglmmBounded Memory Linear and Generalized Linear Models
bigMapBig Data Mapping
bigmatchMaking Optimal Matching Size-Scalable Using Optimal Calipers
bigmdsMultidimensional Scaling for Big Data
bigmemoryManage Massive Matrices with Shared Memory and Memory-Mapped Files
bigmemory.sriA shared resource interface for Bigmemory Project packages
bignumArbitrary-Precision Integer and Floating-Point Mathematics
bigparallelrEasy Parallel Tools
bigQFQuadratic Forms in Large Matrices
bigQueryRInterface with Google BigQuery with Shiny Compatibility
BigQuicBig Quadratic Inverse Covariance Estimation
bigreadrRead Large Text Files
bigRegGeneralized Linear Models (GLM) for Large Data Sets
bigrqueryAn Interface to Google's 'BigQuery' 'API'
bigsimrFast Generation of High-Dimensional Random Vectors
bigsnprAnalysis of Massive SNP Arrays
bigsparserSparse Matrix Format with Data on Disk
bigsplinesSmoothing Splines for Large Samples
bigstatsrStatistical Tools for Filebacked Big Matrices
bigstepStepwise Selection for Large Data Sets
bigSurvSGDBig Survival Analysis Using Stochastic Gradient Descent
bigtabulateTable, Apply, and Split Functionality for Matrix and 'big.matrix' Objects
bigtcrNonparametric Analysis of Bivariate Gap Time with Competing Risks
bigtimeSparse Estimation of Large Time Series Models
BigTSPTop Scoring Pair based methods for classification
bigutilsrUtility Functions for Large-scale Data
BigVARDimension Reduction Methods for Multivariate Time Series
bikeshare14Bay Area Bike Share Trips in 2014
bikm1Co-Clustering Adjusted Rand Index and Bikm1 Procedure for Contingency and Binary Data-Sets
bildA Package for BInary Longitudinal Data
billboardContains Data of Billboard Hot 100 Songs
billboarderCreate Interactive Chart with the JavaScript 'Billboard' Library
bimetallicPower for SNP analyses using silver standard cases
bimetsTime Series and Econometric Modeling
bimixtEstimates Mixture Models for Case-Control Data
BimodalIndexThe Bimodality Index
BinarizeBinarization of One-Dimensional Data
BinarybalancedCutThreshold Cut Point of Probability for a Binary Classifier Model
BinaryDosageCreates, Merges, and Reads Binary Dosage Files
BinaryEMVSVariable Selection for Binary Data Using the EM Algorithm
BinaryEPPMMean and Variance Modeling of Binary Data
binaryGPFit and Predict a Gaussian Process Model with (Time-Series) Binary Response
binaryLogicBinary Logic
binb'binb' is not 'Beamer'
BINCOREstimate the Correlation Between Two Irregular Time Series
bindaMulti-Class Discriminant Analysis using Binary Predictors
bindataGeneration of Artificial Binary Data
bindrParametrized Active Bindings
bindrcppAn 'Rcpp' Interface to Active Bindings
binequalityMethods for Analyzing Binned Income Data
binfordBinford's Hunter-Gatherer Data
bingatBinary Graph Analysis Tools
binGroupEvaluation and Experimental Design for Binomial Group Testing
binGroup2Identification and Estimation using Group Testing
BinGSDCalculation for Single Arm Group Sequential Test with Binary Endpoint
binhfHaar-Fisz Functions for Binomial Data
binmanA Binary Download Manager
BinMatProcesses Binary Data Obtained from Fragment Analysis
binMtoMany-to-One Comparisons of Proportions
binnednpNonparametric Estimation for Interval-Grouped Data
BinNonNorData Generation with Binary and Continuous Non-Normal Components
BinNorSimultaneous Generation of Multivariate Binary and Normal Variates
binomBinomial Confidence Intervals For Several Parameterizations
binomialcftpGenerates binomial random numbers via the coupling from the past algorithm
binomialRFBinomial Random Forest Feature Selection
binomlogitEfficient MCMC for Binomial Logit Models
binomSamSizeConfidence Intervals and Sample Size Determination for a Binomial Proportion under Simple Random Sampling and Pooled Sampling
BinOrdNonNorConcurrent Generation of Binary, Ordinal and Continuous Data
binovisualfieldsDepth-Dependent Binocular Visual Fields Simulation
BinQuasiAnalyzing Replicated ChIP Sequencing Data Using Quasi-Likelihood
binrCut Numeric Values into Evenly Distributed Groups
BinSegBstrapPiecewise Smooth Regression by Bootstrapped Binary Segmentation
binsegRcppEfficient Implementation of Binary Segmentation
binseqtestExact Binary Sequential Designs and Analysis
binsmoothGenerate PDFs and CDFs from Binned Data
binsregBinscatter Estimation and Inference
binstData Preprocessing, Binning for Classification and Regression
BINtoolsBayesian BIN (Bias, Information, Noise) Model of Forecasting
bio.inferPredict Environmental Conditions from Biological Observations
bio3dBiological Structure Analysis
bioacousticsAnalyse Audio Recordings and Automatically Extract Animal Vocalizations
bioassaysSummarising Multi Well Plate Cellular Assay
bioC.logsBioConductor Package Downloads Stats
BioCircosInteractive Circular Visualization of Genomic Data using 'htmlwidgets' and 'BioCircos.js'
BiocManagerAccess the Bioconductor Project Package Repository
BiocombFeature Selection and Classification with the Embedded Validation Procedures for Biomedical Data Analysis
biocomputeCreate and Manipulate BioCompute Objects
BiodemBiodemography Functions
BiodiversityRPackage for Community Ecology and Suitability Analysis
BIOdryMultilevel Modeling of Dendroclimatical Fluctuations
BioFTFBiodiversity Assessment Using Functional Tools
biogasProcess Biogas Data and Predict Biogas Production
biogeoPoint Data Quality Assessment and Coordinate Conversion
biogramN-Gram Analysis of Biological Sequences
biogrowthModelling of Population Growth
BioiBiological Image Analysis
bioimagetoolsTools for Microscopy Imaging
bioinactivationMathematical Modelling of (Dynamic) Microbial Inactivation
BioInsightFilter and Plot RNA Biotypes
biokNNBi-Objective k-Nearest Neighbors Imputation for Multilevel Data
biolinkCreate Hyperlinks to Biological Databases and Resources
BiolinvModelling and Forecasting Biological Invasions
BIOM.utilsUtilities for the BIOM (Biological Observation Matrix) Format
BioMarkFind Biomarkers in Two-Class Discrimination Problems
biomartrGenomic Data Retrieval
BIOMASSEstimating Aboveground Biomass and Its Uncertainty in Tropical Forests
biomod2Ensemble Platform for Species Distribution Modeling
bionetdataBiological and chemical data networks
bioOEDSensitivity Analysis and Optimum Experiment Design for Microbial Inactivation
BiopeakIdentification of Impulse-Like Gene Expression Changes in Short Genomic Series Data
BioPETBiomarker Prognostic Enrichment Tool
BioPETsurvBiomarker Prognostic Enrichment Tool for Time-to-Event Trial
bioPNSimulation of deterministic and stochastic biochemical reaction networks using Petri Nets
BioProbabilityProbability in Biostatistics
bioRadBiological Analysis and Visualization of Weather Radar Data
Bios2corFrom Biological Sequences and Simulations to Correlation Analysis
bios2mdsFrom Biological Sequences to Multidimensional Scaling
bioseqA Toolbox for Manipulating Biological Sequences
biosetConvert a Matrix of Raw Values into Nice and Tidy Data
biosignalEMGTools for Electromyogram Signals (EMG) Analysis
biospearBiomarker Selection in Penalized Regression Models
biostat3Utility Functions, Datasets and Extended Examples for Survival Analysis
BiostatisticsStatistics Tutorials for Biologists
BioStatRInitiation à La Statistique Avec R
biosurveyTools for Biological Survey Planning
bioticCalculation of Freshwater Biotic Indices
biotoolsTools for Biometry and Applied Statistics in Agricultural Science
BioVennCreate Area-Proportional Venn Diagrams from Biological Lists
bipartiteVisualising Bipartite Networks and Calculating Some (Ecological) Indices
bipartiteD3Interactive Bipartite Graphs
biplotbootGUIBootstrap on Classical Biplots and Clustering Disjoint Biplot
BiplotGUIInteractive Biplots in R
BiplotMLBiplots Estimation with Algorithms ML
BiProbitPartialBivariate Probit with Partial Observability
birankrRanking Nodes in Bipartite and Weighted Networks
birdringMethods to Analyse Ring Re-Encounter Data
birkMA Birk's Functions
birtrThe R Package for "The Basics of Item Response Theory Using R"
biscaleTools and Palettes for Bivariate Thematic Mapping
bisectEstimating Cell Type Composition from Methylation Sequencing Data
bisectrTools to find bad commits with git bisect
BiSEpToolkit to Identify Candidate Synthetic Lethality
bisqueApproximate Bayesian Inference via Sparse Grid Quadrature Evaluation (BISQuE) for Hierarchical Models
BisqueRNADecomposition of Bulk Expression with Single-Cell Sequencing
BisRNAAnalysis of RNA Cytosine-5 Methylation
bistablehistoryCumulative History Analysis for Bistable Perception Time Series
bitClasses and Methods for Fast Memory-Efficient Boolean Selections
bit64A S3 Class for Vectors of 64bit Integers
biteBayesian Integrative Models of Trait Evolution
bitmexrR Client for BitMEX
bitopsBitwise Operations
BiTrinABinarization and Trinarization of One-Dimensional Data
bitsqueezrQuantize Floating-Point Numbers for Improved Compressibility
bittermelonMonochrome Bitmap Font Tools
Bivariate.ParetoBivariate Pareto Models
BivarPEstimating the Parameters of Some Bivariate Distributions
BivGeoBasu-Dhar Bivariate Geometric Distribution
bivgeomRoy's Bivariate Geometric Distribution
bivquantEstimation of Bivariate Quantiles
BivRecBivariate Alternating Recurrent Event Data Analysis
BivRegBLSTolerance Interval and EIV Regression - Method Comparison Studies
bivrpBivariate Residual Plots with Simulation Polygons
BivUnifBinGeneration of Bivariate Uniform Data and Its Relation to Bivariate Binary Data
biwaveletConduct Univariate and Bivariate Wavelet Analyses
biwtFunctions to compute the biweight mean vector and covariance & correlation matrices
bizdaysBusiness Days Calculations and Utilities
bjscrapeRAn API Wrapper for the Bureau of Justice Statistics (BJS)
bkmrBayesian Kernel Machine Regression
bkmrhatParallel Chain Tools for Bayesian Kernel Machine Regression
BKPCBayesian Kernel Projection Classifier
blackboxBlack Box Optimization and Exploration of Parameter Space
BlackCarbonProcessing Raw Black Carbon Concentration
blaiseRead and Write FWF Files in the 'Blaise' Format
BlakerCIBlaker's Binomial and Poisson Confidence Limits
BlandAltmanLehPlots (Slightly Extended) Bland-Altman Plots
blandrBland-Altman Method Comparison
BlanketStatsmentsBuild and Compare Statistical Models
blapsrBayesian Inference with Laplace Approximations and P-Splines
blasterNative R Implementation of an Efficient BLAST-Like Algorithm
blastulaEasily Send HTML Email Messages
blatentBayesian Latent Variable Models
blatrSend Emails Using 'Blat' for Windows
blavaanBayesian Latent Variable Analysis
BLCOPBlack-Litterman and Copula Opinion Pooling Frameworks
blendedLinkA New Link Function that Blends Two Specified Link Functions
blenderAnalyze biotic homogenization of landscapes
BlendstatJoint Analysis of Experiments with Mixtures and Random Effects
blinBipartite Longitudinal Influence Network (BLIN) Estimation
blindrecalcBlinded Sample Size Recalculation
blinkRecord Linkage for Empirically Motivated Priors
blissBayesian Functional Linear Regression with Sparse Step Functions
blmBinomial linear and linear-expit regression
blmeBayesian Linear Mixed-Effects Models
blmecoData Files and Functions Accompanying the Book "Bayesian Data Analysis in Ecology using R, BUGS and Stan"
BLModelBlack-Litterman Posterior Distribution
blobA Simple S3 Class for Representing Vectors of Binary Data ('BLOBS')
blockclusterCo-Clustering Package for Binary, Categorical, Contingency and Continuous Data-Sets
BlockCovEstimation of Large Block Covariance Matrices
blockCVSpatial and Environmental Blocking for K-Fold Cross-Validation
BlockFeSTBayesian Calculation of Region-Specific Fixation Index to Detect Local Adaptation
blockForestBlock Forests: Random Forests for Blocks of Clinical and Omics Covariate Data
blocklengthSelect an Optimal Block-Length to Bootstrap Dependent Data (Block Bootstrap)
blockmatrixblockmatrix: Tools to solve algebraic systems with partitioned matrices
BlockMessageCreates strings that show a text message in 8 by 8 block letters
blockmodelingGeneralized and Classical Blockmodeling of Valued Networks
blockmodelsLatent and Stochastic Block Model Estimation by a 'V-EM' Algorithm
blockrandRandomization for Block Random Clinical Trials
blockRARBlock Design for Response-Adaptive Randomization
blocksdesignNested and Crossed Block Designs for Factorial and Unstructured Treatment Sets
blockToolsBlock, Assign, and Diagnose Potential Interference in Randomized Experiments
blogdownCreate Blogs and Websites with R Markdown
BLOQImpute and Analyze Data with BLOQ Observations
blorrTools for Developing Binary Logistic Regression Models
BLPestimatoRPerforms a BLP Demand Estimation
BLRBayesian Linear Regression
blrmDose Escalation Design in Phase I Oncology Trial Using Bayesian Logistic Regression Modeling
BLRPMStochastic Rainfall Generator Bartlett-Lewis Rectangular Pulse Model
BLRShinyInteractive Document for Working with Binary Logistic Regression Analysis
BLRShiny2Interactive Document for Working with Binary Logistic Regression Analysis
BLSMBayesian Latent Space Model
blsRMake Requests from the Bureau of Labor Statistics API
bltmBayesian Latent Threshold Modeling
BlythStillCasellaCIBlyth-Still-Casella Exact Binomial Confidence Intervals
BMABayesian Model Averaging
bmabasketBayesian Model Averaging for Basket Trials
BMAmevtMultivariate Extremes: Bayesian Estimation of the Spectral Measure
bmassBayesian Multivariate Analysis of Summary Statistics
bmemMediation Analysis with Missing Data Using Bootstrap
bmgarchBayesian Multivariate GARCH Models
bmggumBayesian Multidimensional Generalized Graded Unfolding Model
BMiscMiscellaneous Functions for Panel Data, Quantiles, and Printing Results
BmixBayesian Sampling for Stick-Breaking Mixtures
bmixtureBayesian Estimation for Finite Mixture of Distributions
bmkMCMC diagnostics package
bmlmBayesian Multilevel Mediation
bmmixBayesian multinomial mixture
bmotifMotif Analyses of Bipartite Networks
bmpRead Windows Bitmap (BMP) Images
BMRBr'BMRB' File Downloader
bmrmBundle Methods for Regularized Risk Minimization Package
BMRMMAn Implementation of the Bayesian Markov (Renewal) Mixed Models
BMRSrWrapper Functions to the 'BMRS API'
BMRVBayesian Models for Rare Variant Association Analysis
BMSBayesian Model Averaging Library
bmscstanBayesian Multilevel Single Case Models using 'Stan'
BMTThe BMT Distribution
BMTARBayesian Approach for MTAR Models with Missing Data
BMTMEBayesian Multi-Trait Multi-Environment for Genomic Selection Analysis
bnclassifyLearning Discrete Bayesian Network Classifiers from Data
BNDataGeneratorData Generator based on Bayesian Network Model
bndovbBounding Omitted Variable Bias Using Auxiliary Data
bnlearnBayesian Network Structure Learning, Parameter Learning and Inference
bnmaBayesian Network Meta-Analysis using 'JAGS'
bnmonitorAn Implementation of Sensitivity Analysis in Bayesian Networks
bnnSurvivalBagged k-Nearest Neighbors Survival Prediction
bnormnlrBayesian Estimation for Normal Heteroscedastic Nonlinear Regression Models
bnpaBayesian Networks & Path Analysis
BNPdensityFerguson-Klass Type Algorithm for Posterior Normalized Random Measures
BNPmixBayesian Nonparametric Mixture Models
BNPMIXclusterBayesian Nonparametric Model for Clustering with Mixed Scale Variables
bnpsdSimulate Genotypes from the BN-PSD Admixture Model
BNPTSclustA Bayesian Nonparametric Algorithm for Time Series Clustering
BNrichPathway Enrichment Analysis Based on Bayesian Network
BNSLBayesian Network Structure Learning
BNSPBayesian Non- And Semi-Parametric Model Fitting
bnspatialSpatial Implementation of Bayesian Networks and Mapping
bnstructBayesian Network Structure Learning from Data with Missing Values
bnviewerBayesian Networks Interactive Visualization and Explainable Artificial Intelligence
boaBayesian Output Analysis Program (BOA) for MCMC
BoardGamesBoard Games and Tools for Building Board Games
bodenmillerProfiling of Peripheral Blood Mononuclear Cells using CyTOF
BOGBacterium and Virus Analysis of Orthologous Groups (BOG) is a Package for Identifying Differentially Regulated Genes in the Light of Gene Functions
boilerpipeRInterface to the Boilerpipe Java Library
BOINBayesian Optimal INterval (BOIN) Design for Single-Agent and Drug- Combination Phase I Clinical Trials
BOJInterface to Bank of Japan Statistics
boldInterface to Bold Systems API
BolstadFunctions for Elementary Bayesian Inference
Bolstad2Bolstad functions
BoltzMMBoltzmann Machines with MM Algorithms
BondValuationFixed Coupon Bond Valuation Allowing for Odd Coupon Periods and Various Day Count Conventions
BoneProfileRTools to Study Bone Compactness
BonEVAn Improved Multiple Testing Procedure for Controlling False Discovery Rates
bookdownAuthoring Books and Technical Documents with R Markdown
bookdownplusGenerate Assorted Books and Documents with R 'bookdown' Package
BoolFilterOptimal Estimation of Partially Observed Boolean Dynamical Systems
BoolNetConstruction, Simulation and Analysis of Boolean Networks
BoomBayesian Object Oriented Modeling
boomerDebugging Tools to Inspect the Intermediate Steps of a Call
BoomSpikeSlabMCMC for Spike and Slab Regression
BoostMLRBoosting for Multivariate Longitudinal Responses
boostmtreeBoosted Multivariate Trees for Longitudinal Data
bootBootstrap Functions (Originally by Angelo Canty for S)
boot.heterogeneityA Bootstrap-Based Heterogeneity Test for Meta-Analysis
boot.pvalBootstrap p-Values
bootclusterBootstrapping Estimates of Clustering Stability
bootCombCombine Parameter Estimates via Parametric Bootstrap
bootESBootstrap Confidence Intervals on Effect Sizes
bootf2Simulation and Comparison of Dissolution Profiles
bootGOFBootstrap Based Goodness-of-Fit Tests
bootImputeBootstrap Inference for Multiple Imputation
bootLRBootstrapped Confidence Intervals for (Negative) Likelihood Ratio Tests
BootMRMRBootstrap-MRMR Technique for Informative Gene Selection
bootnetBootstrap Methods for Various Network Estimation Routines
bootPLSBootstrap Hyperparameter Selection for PLS Models and Extensions
BootPRBootstrap Prediction Intervals and Bias-Corrected Forecasting
bootruinA Bootstrap Test for the Probability of Ruin in the Classical Risk Process
bootspecdensTesting equality of spectral densities
bootsPLSBootstrap Subsamplings of Sparse Partial Least Squares - Discriminant Analysis for Classification and Signature Identification
bootStepAICBootstrap stepAIC
bootstrapFunctions for the Book "An Introduction to the Bootstrap"
bootstrapFPBootstrap Algorithms for Finite Population Inference
BootstrapQTLBootstrap cis-QTL Method that Corrects for the Winner's Curse
bootSVDFast, Exact Bootstrap Principal Component Analysis for High Dimensional Data
boottolBootstrap Tolerance Levels for Credit Scoring Validation Statistics
bootURBootstrap Unit Root Tests
BoptbdBayesian Optimal Block Designs
borTransforming Behavioral Observation Records into Data Matrices
boralBayesian Ordination and Regression AnaLysis
borrowrEstimate Causal Effects with Borrowing Between Data Sources
BorutaWrapper Algorithm for All Relevant Feature Selection
BOSOBilevel Optimization Selector Operator
BosonSamplingClassical Boson Sampling
BoSSAA Bunch of Structure and Sequence Analysis
BOSSregBest Orthogonalized Subset Selection (BOSS)
botor'AWS Python SDK' ('boto3') for R
boundingboxCreate a Bounding Box in an Image
boussinesqAnalytic Solutions for (ground-water) Boussinesq Equation
boutliersOutlier Detection and Influence Diagnostics for Meta-Analysis
BoutrosLab.plotting.generalFunctions to Create Publication-Quality Plots
boxWrite Reusable, Composable and Modular R Code
boxcoxmixBox-Cox-Type Transformations for Linear and Logistic Models with Random Effects
boxplotdblDouble Box Plot for Two-Axes Correlation
boxrInterface for the 'Box.com API'
bpBlood Pressure Analysis in R
bpaBasic Pattern Analysis
bpboundsNonparametric Bounds for the Average Causal Effect Due to Balke and Pearl and Extensions
bpcaBiplot of Multivariate Data Based on Principal Components Analysis
bpcpBeta Product Confidence Procedure for Right Censored Data
bpcsBayesian Paired Comparison Analysis with Stan
bpDirBoxplots for Directional Data
bPeaksbPeaks: an intuitive peak-calling strategy to detect transcription factor binding sites from ChIP-seq data in small eukaryotic genomes
BPECBayesian Phylogeographic and Ecological Clustering
bpgmmBayesian Model Selection Approach for Parsimonious Gaussian Mixture Models
BPMBayesian Purity Model to Estimate Tumor Purity
BPmodelBeta-Prime Regression Model
bpnregBayesian Projected Normal Regression Models for Circular Data
bppComputations Around Bayesian Predictive Power
bprFitting Bayesian Poisson Regression
bqrorBayesian Quantile Regression for Ordinal Models
bqtlBayesian QTL Mapping Toolkit
bRacatusA Method to Estimate the Accuracy and Biogeographical Status of Georeferenced Biological Data
bracerBrace Expansions
BRACoD.RBRACoD: Bayesian Regression Analysis of Compositional Data
BradleyTerry2Bradley-Terry Models
braggRCalculate the Revealed Aggregator of Probability Predictions
braidReportsVisualize Combined Action Response Surfaces and Report BRAID Analyses
braidrmFitting Dose Response with the BRAID Combined Action Model
BrailleRImproved Access for Blind Users
BrainConInference the Partial Correlations Based on Time Series Data
brainGraphGraph Theory Analysis of Brain MRI Data
brainKCCARegion-Level Connectivity Network Construction via Kernel Canonical Correlation Analysis
brainRHelper Functions to 'misc3d' and 'rgl' Packages for Brain Imaging
BranchingSimulation and Estimation for Branching Processes
brandwatchR'Brandwatch' API to R
brantTest for Parallel Regression Assumption
bravoBayesian Screening and Variable Selection
BrazilMetDownload and Processing of Automatic Weather Stations (AWS) Data of INMET-Brazil
BRDTBinomial Reliability Demonstration Tests
breaBayesian Recurrent Event Analysis
breakageSICM pipette tip geometry estimation
breakDownModel Agnostic Explainers for Individual Predictions
breakfastMethods for Fast Multiple Change-Point Detection and Estimation
breakpointAn R Package for Multiple Break-Point Detection via the Cross-Entropy Method
BreakPointsIdentify Breakpoints in Series of Data
breathtestcoreCore Functions to Read and Fit 13c Time Series from Breath Tests
breathteststanStan-Based Fit to Gastric Emptying Curves
bReezeFunctions for Wind Resource Assessment
BRETIGEABrain Cell Type Specific Gene Expression Analysis
brewTemplating Framework for Report Generation
brglmBias Reduction in Binomial-Response Generalized Linear Models
brglm2Bias Reduction in Generalized Linear Models
brickrEmulate LEGO Bricks in 2D and 3D
bridgedistAn Implementation of the Bridge Distribution with Logit-Link as in Wang and Louis (2003)
bridgerBridge Hand Generator with Criteria Selector
bridger2Genome-Wide RNA Degradation Analysis Using BRIC-Seq Data
bridgesamplingBridge Sampling for Marginal Likelihoods and Bayes Factors
briKmeansPackage for Brik and Fabrik Algorithms to Initialise Kmeans
BRINDAComputation of BRINDA Adjusted Micronutrient Biomarkers for Inflammation
brintonA Graphical EDA Tool
brioBasic R Input Output
briqrInterface to the 'Briq' API
BRISCFast Inference for Large Spatial Datasets using BRISC
briskaRBiological Risk Assessment
BRLBeta Record Linkage
brlrmrBias Reduction with Missing Binary Response
brmBinary Regression Model
brmsBayesian Regression Models using 'Stan'
brnnBayesian Regularization for Feed-Forward Neural Networks
BrobdingnagVery Large Numbers in R
brokenstickBroken Stick Model for Irregular Longitudinal Data
brolgarBrowse Over Longitudinal Data Graphically and Analytically in R
bromanKarl Broman's R Code
broomConvert Statistical Objects into Tidy Tibbles
broom.helpersHelpers for Model Coefficients Tibbles
broom.mixedTidying Methods for Mixed Models
broomExtraEnhancements for 'broom' and 'easystats' Package Families
brotliA Compression Format Optimized for the Web
BrownDogBrown Dog R Interface
BrqBayesian Analysis of Quantile Regression Models
brrBayesian Inference on the Ratio of Two Poisson Rates
brranchingFetch 'Phylogenies' from Many Sources
bruceRBroadly Useful Convenient and Efficient R Functions
BRugsInterface to the 'OpenBUGS' MCMC Software
BrundleNormalisation Tools for Inter-Condition Variability of ChIP-Seq Data
brunnermunzel(Permuted) Brunner-Munzel Test
brxxBayesian Test Reliability Estimation
bs4cardsGenerate Bootstrap 4 Cards
bs4DashA 'Bootstrap 4' Version of 'shinydashboard'
BSagriSafety Assessment in Agricultural Field Trials
bsamBayesian State-Space Models for Animal Movement
bsamGPBayesian Spectral Analysis Models using Gaussian Process Priors
BSBTThe Bayesian Spatial Bradley–Terry Model
BSDABasic Statistics and Data Analysis
bsearchtoolsBinary Search Tools
bsemBayesian Structural Equation Models
BSGSBayesian Sparse Group Selection
BSGWBayesian Survival Model with Lasso Shrinkage Using Generalized Weibull Regression
bshazardNonparametric Smoothing of the Hazard Function
bSimsBird Point Count Simulator
BSLBayesian Synthetic Likelihood
bslibCustom 'Bootstrap' 'Sass' Themes for 'shiny' and 'rmarkdown'
BsMDBayes Screening and Model Discrimination
BSPADATABayesian Proposal to Fit Spatial Econometric Models
bspecBayesian Spectral Inference
bsplinePsdBayesian Nonparametric Spectral Density Estimation Using B-Spline Priors
bsplusAdds Functionality to the R Markdown + Shiny Bootstrap Framework
bspmBridge to System Package Manager
bspmmaBayesian Semiparametric Models for Meta-Analysis
bsregBayesian Spatial Regression Models
BSSBrownian Semistationary Processes
BSSasympAsymptotic Covariance Matrices of Some BSS Mixing and Unmixing Matrix Estimates
bssmBayesian Inference of Non-Linear and Non-Gaussian State Space Models
bssnBirnbaum-Saunders Model
BSSprepWhitening Data as Preparation for Blind Source Separation
bstGradient Boosting
bsToolsCreate HTML Content with Bootstrap 5 Classes and Layouts
bstsBayesian Structural Time Series
bsubSubmitter and Monitor of the 'LSF Cluster'
BSWFitting a Log-Binomial Model using the Bekhit-Schöpe-Wagenpfeil (BSW) Algorithm
btbBeyond the Border - Kernel Density Estimation for Urban Geography
BTdecayLassoBradley-Terry Model with Exponential Time Decayed Log-Likelihood and Adaptive Lasso
btergmTemporal Exponential Random Graph Models by Bootstrapped Pseudolikelihood
BTLLassoModelling Heterogeneity in Paired Comparison Data
BTMBiterm Topic Models for Short Text
BTSPASBayesian Time-Stratified Population Analysis
BTYDImplementing BTYD Models with the Log Sum Exp Patch
BTYDplusProbabilistic Models for Assessing and Predicting your Customer Base
bubblyrBeautiful Bubbles for 'shiny' and 'rmarkdown' Backgrounds
buckyBucky's Archive for Data Analysis in the Social Sciences
BUCSSBias and Uncertainty Corrected Sample Size
BuddleA Deep Learning for Statistical Classification and Regression Analysis with Random Effects
buffeRsBuffer Generation for Spatial Models
buildmerStepwise Elimination and Term Reordering for Mixed-Effects Regression
buildrOrganize & Run Build Scripts Comfortably
BuildSysSystem for Building and Debugging C/C++ Dynamic Libraries
bujarBuckley-James Regression for Survival Data with High-Dimensional Covariates
bulletcpAutomatic Groove Identification via Bayesian Changepoint Detection
bulletrAlgorithms for Matching Bullet Lands
BullsEyeRTopic Modelling
bullwhipgameBullwhip Effect Demo in Shiny
bumblTools for Modeling Bumblebee Colony Growth and Decline
bumblebeeQuantify Disease Transmission Within and Between Population Groups
bunchingEstimate Bunching
bunchrAnalyze Bunching in a Kink or Notch Setting
bundesbankDownload Data from Bundesbank
bundesligRAll Final Tables of the Bundesliga
bupaRBusiness Process Analysis in R
burnrForest Fire History Analysis
BurStFinBurns Statistics Financial
BurStMiscBurns Statistics Miscellaneous
burstsMarkov model for bursty behavior in streams
busdaterStandard Date Calculations for Business
BusinessDurationCalculates Business Duration Between Two Dates
butcherModel Butcher
BuyseTestGeneralized Pairwise Comparisons
BvalueB-Value and Empirical Equivalence Bound
BVARHierarchical Bayesian Vector Autoregression
bvarsvBayesian Analysis of a Vector Autoregressive Model with Stochastic Volatility and Time-Varying Parameters
bvartoolsBayesian Inference of Vector Autoregressive Models
BVARverseTidy Bayesian Vector Autoregression
bvennA Simple alternative to proportional Venn diagrams
bvlsThe Stark-Parker algorithm for bounded-variable least squares
bvpSolveSolvers for Boundary Value Problems of Differential Equations
BVSNLPBayesian Variable Selection in High Dimensional Settings using Nonlocal Priors
bwdBackward Procedure for Change-Point Detection
bWGRBayesian Whole-Genome Regression
BWGSBreedWheat Genomic Selection Pipeline
bwimageDescribe Image Patterns in Natural Structures
BWStestBaumgartner Weiss Schindler Test of Equal Distributions
bwsToolsTools for Case 1 Best-Worst Scaling (MaxDiff) Designs
bysykkelGet City Bike Data from Norway
bytescircleStatistics About Bytes Contained in a File as a Circle Plot
bzinbBivariate Zero-Inflated Negative Binomial Model Estimator
c060Extended Inference for Lasso and Elastic-Net Regularized Cox and Generalized Linear Models
c212Methods for Detecting Safety Signals in Clinical Trials Using Body-Systems (System Organ Classes)
c2cCompare Two Classifications or Clustering Solutions of Varying Structure
c2d4u.tools'c2d4u' - CRAN Packages for 'Ubuntu'
c3'C3.js' Chart Library
c3netInfering large-scale gene networks with C3NET
C443See a Forest for the Trees
C50C5.0 Decision Trees and Rule-Based Models
caSimple, Multiple and Joint Correspondence Analysis
CA3variantsThree-Way Correspondence Analysis Variants
cabinetsProject Specific Workspace Organization Templates
cabootcrsBootstrap Confidence Regions for Simple and Multiple Correspondence Analysis
cacheCache and Retrieve Computation Results
cachemCache R Objects with Automatic Pruning
cacIRTClassification Accuracy and Consistency under Item Response Theory
CaDENCEConditional Density Estimation Network Construction and Evaluation
CADFtestA Package to Perform Covariate Augmented Dickey-Fuller Unit Root Tests
CADStatProvides a GUI to Several Statistical Methods
caesarEncrypts and Decrypts Strings
caffsimSimulation of Plasma Caffeine Concentrations by Using Population Pharmacokinetic Model
cAIC4Conditional Akaike Information Criterion for 'lme4' and 'nlme'
CAinterprToolsGraphical Aid in Correspondence Analysis Interpretation and Significance Testings
CairoR Graphics Device using Cairo Graphics Library for Creating High-Quality Bitmap (PNG, JPEG, TIFF), Vector (PDF, SVG, PostScript) and Display (X11 and Win32) Output
cairoDeviceEmbeddable Cairo Graphics Device Driver
CAISErComparison of Algorithms with Iterative Sample Size Estimation
calACSCalculations for All Common Subsequences
CALANGOComparative Analysis with Annotation-Based Genomic Components
Calculator.LR.FNsCalculator for LR Fuzzy Numbers
calculusHigh Dimensional Numerical and Symbolic Calculus
calcUniqueSimple Wrapper for Computationally Expensive Functions
calcWOICalculates the Wavelet-Based Organization Index
calendarCreate, Read, Write, and Work with 'iCalander' Files, Calendars and Scheduling Data
calendRReady to Print Monthly and Yearly Calendars Made with 'ggplot2'
CALFCoarse Approximation Linear Function
CALIBERrfimputeMultiple Imputation Using MICE and Random Forest
calibrarAutomated Parameter Estimation for Complex (Ecological) Models
calibrateCalibration of Scatterplot and Biplot Axes
calibrateBinaryCalibration for Computer Experiments with Binary Responses
CalibrateSSBWeighting and Estimation for Panel Data with Non-Response
calibratorBayesian Calibration of Complex Computer Codes
CalibratRMapping ML Scores to Calibrated Predictions
CallEshotgunProviding an Interface to the e-Shotgun Algorithm for Bayesian Optimization
callrCall R from R
calmateImproved Allele-Specific Copy Number of SNP Microarrays for Downstream Segmentation
calpassapiR Interface to Access CalPASS API
CalSimThe Calibration Simplex
CAMANFinite Mixture Models and Meta-Analysis Tools - Based on C.A.MAN
CamelUp'CamelUp' Board Game as a Teaching Aid for Introductory Statistics
campfinWrangle Campaign Finance Data
camsRadClient for CAMS Radiation Service
caMSTMixed Computerized Adaptive Multistage Testing
camtrapRCamera Trap Data Management and Preparation of Occupancy and Spatial Capture-Recapture Analyses
cancensusAccess, Retrieve, and Work with Canadian Census Data and Geography
cancerGIAnalyses of Cancer Gene Interaction
CancerGramPrediction of Anticancer Peptides
cancerTimingEstimation of Temporal Ordering of Cancer Abnormalities
candiscVisualizing Generalized Canonical Discriminant and Canonical Correlation Analysis
CanopyAccessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing
canprotCompositional Analysis of Differentially Expressed Proteins in Cancer
cansimAccessing Statistics Canada Data Table and Vectors
CANSIM2RDirectly Extracts Complete CANSIM Data Tables
canvasXpressVisualization Package for CanvasXpress in R
canvasXpress.dataDatasets for the 'canvasXpress' Package
capCovariate Assisted Principal (CAP) Regression for Covariance Matrix Outcomes
capeCombined Analysis of Pleiotropy and Epistasis for Diversity Outbred Mice
caperComparative Analyses of Phylogenetics and Evolution in R
capitalRCapital Budgeting Analysis, Annuity Loan Calculations and Amortization Schedules
caplCompute and Visualize CAPL-2 Scores and Interpretations
capmCompanion Animal Population Management
capnCapital Asset Pricing for Nature
CaPO4SimA Virtual Patient Simulator in the Context of Calcium and Phosphate Homeostasis
captionerNumbers Figures and Creates Simple Captions
captrClient for the Captricity API
capusheCAlibrating Penalities Using Slope HEuristics
capwireEstimates population size from non-invasive sampling
carCompanion to Applied Regression
caracasComputer Algebra
caRamelAutomatic Calibration by Evolutionary Multi Objective Algorithm
caratCovariate-Adaptive Randomization for Clinical Trials
CARBayesSpatial Generalised Linear Mixed Models for Areal Unit Data
CARBayesdataData Used in the Vignettes Accompanying the CARBayes and CARBayesST Packages
CARBayesSTSpatio-Temporal Generalised Linear Mixed Models for Areal Unit Data
carbonateInteract with 'carbon.js'
carcassEstimation of the Number of Fatalities from Carcass Searches
cardCardiovascular and Autonomic Research Design
carDataCompanion to Applied Regression Data Sets
cardidatesIdentification of Cardinal Dates in Ecological Time Series
careHigh-Dimensional Regression and CAR Score Variable Selection
CARE1Statistical package for population size estimation in capture-recapture models
caRecallGovernment of Canada Vehicle Recalls Database API Wrapper
carelessProcedures for Computing Indices of Careless Responding
caretClassification and Regression Training
caretEnsembleEnsembles of Caret Models
carfimaContinuous-Time Fractionally Integrated ARMA Process for Irregularly Spaced Long-Memory Time Series Data
cargoDevelop R Packages using Rust
caribouEstimation of caribou abundance based on large scale aggregations monitored by radio telemetry
CARlassoConditional Autoregressive LASSO
CarletonStatsFunctions for Statistics Classes at Carleton College
CARLITEcological Quality Ratios Calculation and Plot
CarlsonCarlson Elliptic Integrals and Incomplete Elliptic Integrals
caROCContinuous Biomarker Evaluation with Adjustment of Covariates
carolineA Collection of Database, Data Structure, Visualization, and Utility Functions for R
carpenterBuild Common Tables of Summary Statistics for Reports
caRpoolsCRISPR AnalyzeR for Pooled CRISPR Screens
carrierIsolate Functions for Remote Execution
CARRoTPredicting Categorical and Continuous Outcomes Using One in Ten Rule
CARSCovariate Assisted Ranking and Screening for Large-Scale Two-Sample Inference
carSurvCorrelation-Adjusted Regression Survival (CARS) Scores
cartograflowFiltering Matrix for Flow Mapping
cartogramCreate Cartograms with R
cartogramRContinuous Cartogram
cartographyThematic Cartography
cartoolsTools for Understanding Highway Performance
carxCensored Autoregressive Model with Exogenous Covariates
CascadeSelection, Reverse-Engineering and Prediction in Cascade Networks
CascadeDataExperimental Data of Cascade Experiments in Genomics
cascadessA Style Pronoun for 'htmltools' Tags
caschronoS<e9>ries Temporelles Avec R
cascsimCasualty Actuarial Society Individual Claim Simulator
casebaseFitting Flexible Smooth-in-Time Hazards and Risk Functions via Logistic and Multinomial Regression
caseMatchIdentify Similar Cases for Qualitative Case Studies
casenMetodos De Estimacion Con Disenio Probabilistico y Estratificado en Encuesta CASEN (Estimation Methods with Probabilistic Stratified Sampling in CASEN Survey)
casinoPlay Casino Games
CASMAPDetection of Statistically Significant Combinations of SNPs in Association Mapping
cassandRaFinds Missing Links and Metric Confidence Intervals in Ecological Bipartite Networks
CAST'caret' Applications for Spatial-Temporal Models
castorEfficient Phylogenetics on Large Trees
catAnalysis of categorical-variable datasets with missing values
cat.dtComputerized Adaptive Testing and Decision Trees
cat2catMapping of a Categorical Variable in a Panel Dataset
catalogAccess the 'Spark Catalog' API via 'sparklyr'
catchCovariate-Adjusted Tensor Classification in High-Dimensions
catchrTaking the Pain Out of Catching and Handling Conditions
catcontTest, Identify, Select and Mutate Categorical or Continuous Values
catdapCategorical Data Analysis Program Package
catdataCategorical Data
CatDataAnalysisDatasetsfor Categorical Data Analysis by Agresti
CatDynFishery Stock Assessment by Catch Dynamics Models
cateHigh Dimensional Factor Analysis and Confounder Adjusted Testing and Estimation
categoryEncodingsCategory Variable Encodings
catenaryFits a Catenary to Given Points
CatEncodersEncoders for Categorical Variables
CateSelectionCategorical Variable Selection Methods
catfunCategorical Data Analysis
catiCommunity Assembly by Traits: Individuals and Beyond
catIrtAn R Package for Simulating IRT-Based Computerized Adaptive Tests
CATkitChronomics Analysis Toolkit (CAT): Periodicity Analysis
catlearnFormal Psychological Models of Categorization and Learning
catmapCase-Control and TDT Meta-Analysis Package
catmaplyHeatmap for Categorical Data using 'plotly'
catnetCategorical Bayesian Network Inference
caToolsTools: Moving Window Statistics, GIF, Base64, ROC AUC, etc
catRGeneration of IRT Response Patterns under Computerized Adaptive Testing
CatRegSolution Paths for Linear and Logistic Regression Models with Categorical Predictors, with SCOPE Penalty
catseyesCreate Catseye Plots Illustrating the Normal Distribution of the Means
catsimBinary and Categorical Image Similarity Index
catspecSpecial models for categorical variables
catSplitEncode Categorical Variables with Split Information from CART
catSurvComputerized Adaptive Testing for Survey Research
CATTThe Cochran-Armitage Trend Test
CATTexactComputation of the p-Value for the Exact Conditional Cochran-Armitage Trend Test
cattonumEncode Categorical Features
CauchyCPPowerful Test for Survival Data under Non-Proportional Hazards
causactAccelerated Bayesian Analytics with DAGs
causal.decompCausal Decomposition Analysis
causalCmprskNonparametric and Cox-Based Estimation of ATE in Competing Risks
causaldataExample Data Sets for Causal Inference Textbooks
causaldrfTools for Estimating Causal Dose Response Functions
causaleffectDeriving Expressions of Joint Interventional Distributions and Transport Formulas in Causal Models
CausalGAMEstimation of Causal Effects with Generalized Additive Models
CausalGPSMatching on Generalized Propensity Scores with Continuous Exposures
CausalImpactInferring Causal Effects using Bayesian Structural Time-Series Models
CausalKinetiXLearning Stable Structures in Kinetic Systems
CausalMBSTSMBSTS Models for Causal Inference and Forecasting
causaloptimAn Interface to Specify Causal Graphs and Compute Bounds on Causal Effects
causalPAFCausal Effect for Population Attributable Fractions (PAF)
CausalQueriesMake, Update, and Query Binary Causal Models
causalsensSelection Bias Approach to Sensitivity Analysis for Causal Effects
causalweightEstimation Methods for Causal Inference Based on Inverse Probability Weighting
CautiousLearningControl Charts with Guaranteed In-Control Performance and Cautious Parameters Learning
CAvariantsCorrespondence Analysis Variants
caviarpdCluster Analysis via Random Partition Distributions
CB2CRISPR Pooled Screen Analysis using Beta-Binomial Test
cbaClustering for Business Analytics
cbanalysisCoffee Break Descriptive Analysis
cbarContextual Bayesian Anomaly Detection in R
CBCgrpsCompare Baseline Characteristics Between Groups
CBDACompressive Big Data Analytics
cbinomContinuous Analog of a Binomial Distribution
cbirdClustering of Multivariate Binary Data with Dimension Reduction via L1-Regularized Likelihood Maximization
cblasrThe C Interface to 'BLAS' Routines
CBPSCovariate Balancing Propensity Score
cbqConditional Binary Quantile Models
cbsodataRStatistics Netherlands (CBS) Open Data API Client
CBSrFits Cubic Bezier Spline Functions to Intertemporal and Risky Choice Data
CBTConfidence Bound Target Algorithm
CCControl Charts
CCACanonical Correlation Analysis
CCAMLRGISAntarctic Spatial Data Manipulation
ccaPP(Robust) Canonical Correlation Analysis via Projection Pursuit
ccboostRobust Boosting
cccdClass Cover Catch Digraphs
ccChooserDeveloping a core collections
cccpCone Constrained Convex Problems
cccrmConcordance Correlation Coefficient for Repeated (and Non-Repeated) Measures
ccdaCombined Cluster and Discriminant Analysis
ccdfDistribution-Free Single-Cell Differential Expression Analysis
ccdrAlgorithmCCDr Algorithm for Learning Sparse Gaussian Bayesian Networks
cchsCox Model for Case-Cohort Data with Stratified Subcohort-Selection
cchsflowTransforming and Harmonizing CCHS Variables
ccidCross-Covariance Isolate Detect: a New Change-Point Method for Estimating Dynamic Functional Connectivity
cclustConvex Clustering Methods and Clustering Indexes
CCMCorrelation Classification Method
ccmEstimatorComparative Causal Mediation Estimation
ccmmCompositional Mediation Model
ccmReportRWraps 'CCM' with Utility Functions
ccoptimalmatchImplementation of Case-Control Optimal Matching
ccostrEstimation of Mean Costs in Censored Data
CCPSignificance Tests for Canonical Correlation Analysis (CCA)
CCpopOne and two locus GWAS of binary phenotype with case-control-population design
ccRemoverRemoves the Cell-Cycle Effect from Single-Cell RNA-Sequencing Data
ccrsCorrect and Cluster Response Style Biased Data
ccrtmCoupled Chain Radiative Transfer Models
ccssCluster Circular Systematic Sampling
ccTensorCUR/CX Tensor Decomposition
cctoolsTools for the Continuous Convolution Trick in Nonparametric Estimation
CCTpackConsensus Analysis, Model-Based Clustering, and Cultural Consensus Theory Applications
CCWeightsPerform Weighted Linear Regression for Calibration Curve
cdCD Data for Entity Resolution
cdataFluid Data Transformations
CDatanetModeling Count Data with Peer Effects
cdbReading and Writing Constant DataBases
cdcatRCognitive Diagnostic Computerized Adaptive Testing
cdcfluviewRetrieve Flu Season Data from the United States Centers for Disease Control and Prevention ('CDC') 'FluView' Portal
cdcsisConditional Distance Correlation Based Feature Screening and Conditional Independence Inference
cderInterface to the California Data Exchange Center
cdfquantregQuantile Regression for Random Variables on the Unit Interval
CDFtDownscaling and Bias Correction via Non-Parametric CDF-Transform
CDLassoCoordinate Descent Algorithms for Lasso Penalized L1, L2, and Logistic Regression
cdleiCause-Deleted Life Expectancy Improvement Procedure
cdlToolsTools to Download and Work with USDA Cropscape Data
CDMCognitive Diagnosis Modeling
cdmToolsUseful Tools for Cognitive Diagnosis Modeling
CDNmoneyComponents of Canadian Monetary and Credit Aggregates
cdomR Functions to Model CDOM Spectra
cdparcoordTop Frequency-Based Parallel Coordinates
cdrcRLoad 'CDRC' Data
CDROMPhylogenetically Classifies Retention Mechanisms of Duplicate Genes from Gene Expression Data
cdsConstrained Dual Scaling for Detecting Response Styles
CDSeqA Complete Deconvolution Method using Sequencing Data
CDVineCopulaConditionalSampling from Conditional C- and D-Vine Copulas
CECCross-Entropy Clustering
cec2013Benchmark functions for the Special Session and Competition on Real-Parameter Single Objective Optimization at CEC-2013
cedThe Compact Encoding Detector
CEDARSSimple and Efficient Pipeline for Electronic Health Record Annotation
cegChain Event Graph
CEGOCombinatorial Efficient Global Optimization
celestialCollection of Common Astronomical Conversion Routines and Functions
cellOriginsFinds RNASeq Source Tissues Using In Situ Hybridisation Data
cellrangerTranslate Spreadsheet Cell Ranges to Rows and Columns
celltrackRMotion Trajectory Analysis
cellVolumeDistFunctions to fit cell volume distributions and thereby estimate cell growth rates and division times
cellWiseAnalyzing Data with Cellwise Outliers
cemCoarsened Exact Matching
CenBARBroken Adaptive Ridge AFT Model with Censored Data
CENFAClimate and Ecological Niche Factor Analysis
cenGAMCensored Regression with Smooth Terms
cenROCEstimation of the Time-Dependent ROC Curve and AUC for Censored Survival Data
censableMaking Census Data More Usable
censCovLinear Regression with a Randomly Censored Covariate
CensMFMFinite Mixture of Multivariate Censored/Missing Data
censNIDcensored NID samples
censo2017Base de Datos de Facil Acceso del Censo 2017 de Chile (2017 Chilean Census Easy Access Database)
censorcopulaEstimate Parameter of Bivariate Copula
censRegCensored Regression (Tobit) Models
CensRegModFits Normal and Student-t Censored Regression Model
CensSpatialCensored Spatial Models
Census2016Data from the Australian Census 2016
censusapiRetrieve Data from the Census APIs
censusGeographyChanges United States Census Geographic Code into Name of Location
censusrCollect Data from the Census API
censusxyAccess the U.S. Census Bureau's Geocoding A.P.I. System
censysTools to Query the 'Censys' API
centiserveFind Graph Centrality Indices
centralplotShow the Strength of Relationships Between Centre and Peripheral Items
centrifugeRNon-Trivial Balance of Centrifuge Rotors
CEoptimCross-Entropy R Package for Optimization
CePaCentrality-Based Pathway Enrichment
cepiigeodistCEPII's GeoDist Datasets
CepLDADiscriminant Analysis of Time Series in the Presence of Within-Group Spectral Variability
ceppContext Driven Exploratory Projection Pursuit
cepRBusca CEPs Brasileiros
cepreaderRead 'CEP' and Legacy 'CANOCO' Files
ceramicDownload Online Imagery Tiles
CerioliOutlierDetectionOutlier Detection Using the Iterated RMCD Method of Cerioli (2010)
CeRNASeekIdentification and Analysis of ceRNA Regulation
cernnCovariance Estimation Regularized by Nuclear Norm Penalties
ceRtaintyCertainty Equivalent
ceserCluster Estimated Standard Errors
cesRAccess the Canadian Election Study Datasets
cetcolorCET Perceptually Uniform Colour Maps
ceterisParibusCeteris Paribus Profiles
cfaConfigural Frequency Analysis (CFA)
CFAcoopColony Formation Assay: Taking into Account Cellular Cooperation
cfbfastRFunctions to Access College Football Play by Play Data
CFCCause-Specific Framework for Competing-Risk Analysis
cfdaCategorical Functional Data Analysis
cfdecompCounterfactual Decomposition: MC Integration of the G-Formula
CfEstimateQuantilesEstimate quantiles using any order Cornish-Fisher expansion
CFFSimple Similarity for User-Based Collaborative Filtering Systems
cffdrsCanadian Forest Fire Danger Rating System
cffrGenerate Citation File Format ('cff') Metadata for R Packages
cfidIdentification of Counterfactual Queries in Causal Models
CFiltCollaborative Filtering by Reference Classes
cfmaCausal Functional Mediation Analysis
cfmortalityCystic Fibrosis Survival Prediction Model Based on Stanojevic Model
cforwardForward Selection using Concordance/C-Index
cgCompare Groups, Analytically and Graphically
cgal4h'CGAL' Version 4 C++ Header Files
cgamConstrained Generalized Additive Model
cgAUCCalculate AUC-type measure when gold standard is continuous and the corresponding optimal linear combination of variables with respect to it
cgdsrR-Based API for Accessing the MSKCC Cancer Genomics Data Server (CGDS)
CGEComputing General Equilibrium
CGGPComposite Grid Gaussian Processes
cghRAArray CGH Data Analysis and Visualization
cglassoConditional Graphical LASSO for Gaussian Graphical Models with Censored and Missing Values
cglmFits Conditional Generalized Linear Models
cgmanalysisClean and Analyze Continuous Glucose Monitor Data
CGManalyzerContinuous Glucose Monitoring Data Analyzer
cgmquantifyAnalyzing Glucose and Glucose Variability
CGPComposite Gaussian Process Models
CGPfunctionsPowell Miscellaneous Functions for Teaching and Learning Statistics
cgraphComputational Graphs
cgrcusumContinuous Time Generalized Rapid Response CUSUM
cgwtoolsMiscellaneous Tools
chAbout some Small Functions
ChainLadderStatistical Methods and Models for Claims Reserving in General Insurance
chameleonAutomatic Colors for Multi-Dimensional Data
chandwichChandler-Bate Sandwich Loglikelihood Adjustment
changedetectionNonparametric Change Detection in Multivariate Linear Relationships
changepointMethods for Changepoint Detection
changepoint.geoGeometrically Inspired Multivariate Changepoint Detection
changepoint.influencePackage to Calculate the Influence of the Data on a Changepoint Segmentation
changepoint.mvChangepoint Analysis for Multivariate Time Series
changepoint.npMethods for Nonparametric Changepoint Detection
changepointsHDChange-Point Estimation for Expensive and High-Dimensional Models
changepointsVarChange-Points Detections for Changes in Variance
ChangePointTaylorIdentify Changes in Mean
ChangepointTestingChange Point Estimation for Clustered Signals
changepointTestsChange Point Tests for Joint Distributions and Copulas
changerChange R Package Name
ChannelAttributionMarkov Model for Online Multi-Channel Attribution
ChannelAttributionAppShiny Web Application for the Multichannel Attribution Problem
chantricsLoglikelihood Adjustments for Econometric Models
Chaos010-1 Test for Chaos
ChaosGameChaos Game
ChargeTransportCharge Transfer Rates and Charge Carrier Mobilities
charlatanMake Fake Data
chartqlSimplified Language for Plots and Charts
CHCNCanadian Historical Climate Network
cheatRCatch Cheaters
cheatsheetDownload R Cheat Sheets Locally
chebDiscrete Linear Chebyshev Approximation
chebpolMultivariate Interpolation
checkargCheck the Basic Validity of a (Function) Argument
CheckDigitCalculate and verify check digits
checkdownCheck-Fields and Check-Boxes for 'rmarkdown'
checkLuhnChecks if a Number is Valid Using the Luhn Algorithm
checkmateFast and Versatile Argument Checks
checkpointInstall Packages from Snapshots on the Checkpoint Server for Reproducibility
checkrCheck the Properties of Common R Objects
cheddarAnalysis and Visualisation of Ecological Communities
cheeseTools for Working with Data During Statistical Analysis
chemCalCalibration Functions for Analytical Chemistry
chemmodlabA Cheminformatics Modeling Laboratory for Fitting and Assessing Machine Learning Models
chemometricsMultivariate Statistical Analysis in Chemometrics
ChemoSpecExploratory Chemometrics for Spectroscopy
ChemoSpec2DExploratory Chemometrics for 2D Spectroscopy
ChemoSpecUtilsFunctions Supporting Packages ChemoSpec and ChemoSpec2D
cherryMultiple Testing Methods for Exploratory Research
cherryblossomCherry Blossom Run Race Results
chessRead, Write, Create and Explore Chess Games
chestChange-in-Estimate Approach to Assess Confounding Effects
CHFFClosest History Flow Field Forecasting for Bivariate Time Series
chiThe Chi Distribution
chi2x3wayPartitioning Chi-Squared and Tau Index for Three-Way Contingency Tables
chicaneCapture Hi-C Analysis Engine
chickn'Compressive' Hierarchical Kernel Clustering Toolbox
childdevdataChild Development Data
childesrAccessing the 'CHILDES' Database
childhoodmortalityCalculating Childhood Mortality Rates
childsdsData and Methods Around Reference Values in Pediatrics
chilemapasMapas de las Divisiones Politicas y Administrativas de Chile (Maps of the Political and Administrative Divisions of Chile)
ChillModelsProcessing Chill and Heat Models for Temperate Fruit Trees
chillRStatistical Methods for Phenology Analysis in Temperate Fruit Trees
chinese.miscMiscellaneous Tools for Chinese Text Mining and More
ChineseNamesChinese Name Database 1930-2008
chipPCRToolkit of Helper Functions to Pre-Process Amplification Data
ChIPtestNonparametric Methods for Identifying Differential Enrichment Regions with ChIP-Seq Data
chirpsAPI Client for CHIRPS
chisq.posthoc.testA Post Hoc Analysis for Pearson's Chi-Squared Test for Count Data
chkCheck User-Supplied Function Arguments
chlorpromazineRConvert Antipsychotic Doses to Chlorpromazine Equivalents
CHMMCoupled Hidden Markov Models
CHNCapitalStockCompute Chinese Capital Stocks
chngptEstimation and Hypothesis Testing for Threshold Regression
CHNOSZThermodynamic Calculations and Diagrams for Geochemistry
choiceDesDesign Functions for Choice Studies
ChoiceModelRChoice Modeling in R
CHOIRBMPlots the CHOIR Body Map
choleraAmend, Augment and Aid Analysis of John Snow's Cholera Map
CholWishartCholesky Decomposition of the Wishart Distribution
choplumpChoplump tests
chopthinThe Chopthin Resampler
ChoRChordalysis R Package
chordsEstimation in Respondent Driven Samples
choroplethrSimplify the Creation of Choropleth Maps in R
choroplethrAdmin1Contains an Administrative-Level-1 Map of the World
choroplethrMapsContains Maps Used by the 'choroplethr' Package
chorrrdsMusic Chords Extraction
christmasGeneration of Christmas Cards
chromerInterface to Chromosome Counts Database API
chromoMapInteractive Genomic Visualization of Biological Data
chromseqSplit Chromosome 'Fasta' File
chronChronological Objects which can Handle Dates and Times
chronicleGrammar for Creating R Markdown Reports
chronochrtCreating Chronological Charts with R
chronosphereEarth System History Variables
CHsharpChoi and Hall Style Data Sharpening
chunkedChunkwise Text-File Processing for 'dplyr'
chunkhooksChunk Hooks for 'R Markdown'
chunkRRead Tables in Chunks
chyperFunctions for Conditional Hypergeometric Distributions
CIAAWconsensusIsotope Ratio Meta-Analysis
CICAClusterwise Independent Component Analysis
ciccrCausal Inference in Case-Control Studies
ciceroneProvide Tours of 'Shiny' Applications
CIDERMeta-Clustering for Single-Cell Data Integration and Evaluation
CIEEEstimating and Testing Direct Effects in Directed Acyclic Graphs using Estimating Equations
cifCointegrated ICU Forecasting
CIFsmryWeighted summary of cumulative incidence functions
ciftiToolbox for Connectivity Informatics Technology Initiative ('CIFTI') Files
ciftiToolsTools for Reading, Writing, Viewing and Manipulating CIFTI Files
CIMCompositional Impact of Migration
cimirInterface to the CIMIS Web API
CIMTxCausal Inference for Multiple Treatments with a Binary Outcome
cinCausal Inference for Neuroscience
cinaRA Computational Pipeline for Bulk 'ATAC-Seq' Profiles
cinaRgenesetsReady-to-Use Curated Gene Sets for 'cinaR'
CINIDCurculionidae INstar IDentification
CINmetricsCalculate Chromosomal Instability Metrics
CINNADeciphering Central Informative Nodes in Network Analysis
cinterpolateInterpolation From C
CIplotFunctions to Plot Confidence Interval
cirCentered Isotonic Regression and Dose-Response Utilities
circacompareAnalyses of Circadian Data
circleR Client Package for Circle CI
circletyperCurve Text Elements in 'Shiny' Using 'CircleType.js'
circlizeCircular Visualization
CircMLEMaximum Likelihood Analysis of Circular Data
CircNNTSRStatistical Analysis of Circular Data using Nonnegative Trigonometric Sums (NNTS) Models
CircOutlierDetection of Outliers in Circular-Circular Regression
CircSpaceTimeSpatial and Spatio-Temporal Bayesian Model for Circular Data
CircStatsCircular Statistics, from "Topics in Circular Statistics" (2001)
circularCircular Statistics
CircularDDMCircular Drift-Diffusion Model
circularEVExtreme Value Analysis for Circular Data
circumplexAnalysis and Visualization of Circular Data
cIRTChoice Item Response Theory
CISECommon and Individual Structure Explained for Multiple Graphs
citCausal Inference Test
CITANCITation ANalysis Toolpack
citationSoftware Citation Tools
citbcmstCIT Breast Cancer Molecular SubTypes Prediction
citccmstCIT Colon Cancer Molecular SubTypes Prediction
citecorpClient for the Open Citations Corpus
ciToolsConfidence or Prediction Intervals, Quantiles, and Probabilities for Statistical Models
citrusCustomer Intelligence Tool for Rapid Understandable Segmentation
CityPlotVisualization of structure and contents of a database
CityWaterBalanceTrack Flows of Water Through an Urban System
ciuContextual Importance and Utility
ciuupiConfidence Intervals Utilizing Uncertain Prior Information
ciuupi2Kabaila and Giri (2009) Confidence Interval
civisR Client for the 'Civis Platform API'
CJAMPCopula-Based Joint Analysis of Multiple Phenotypes
cjbartHeterogeneous Effects Analysis of Conjoint Experiments
cjointAMCE Estimator for Conjoint Experiments
ckanrClient for the Comprehensive Knowledge Archive Network ('CKAN') API
CKATComposite Kernel Association Test for Pharmacogenetics Studies
CKLRTComposite Kernel Machine Regression Based on Likelihood Ratio Test
Ckmeans.1d.dpOptimal, Fast, and Reproducible Univariate Clustering
CKMRpopForward-in-Time Simulation and Tallying of Pairwise Relationships
CladdisMeasuring Morphological Diversity and Evolutionary Tempo
cladoRcppC++ Implementations of Phylogenetic Cladogenesis Calculations
ClaimsProblemsAnalysis of Conflicting Claims
clamClassical Age-Depth Modelling of Cores from Deposits
clampSegIdealisation of Patch Clamp Recordings
ClamRTime Series Modeling for Climate Change Proxies
clarifaiAccess to Clarifai API
clarkeTestDistribution-Free Tests of Non-Nested Models
classFunctions for Classification
ClassComparisonClasses and Methods for "Class Comparison" Problems on Microarrays
ClassDiscoveryClasses and Methods for "Class Discovery" with Microarrays or Proteomics
classGraphConstruct Graphs of S4 Class Hierarchies
classifierplotsGenerates a Visualization of Classifier Performance as a Grid of Diagnostic Plots
classiflyExplore classification models in high dimensions
classIntChoose Univariate Class Intervals
classmapVisualizing Classification Results
cld2Google's Compact Language Detector 2
cld3Google's Compact Language Detector 3
cldaConvolution-Based Linear Discriminant Analysis
cleanFast and Easy Data Cleaning
CleanBSequencesClean Biological Sequences
cleancallC Resource Cleanup via Exit Handlers
cleandataTo Inspect and Manipulate Data; and to Keep Track of This Process
cleanerFast and Easy Data Cleaning
cleanerRHow to Handle your Missing Data
cleangeoCleaning Geometries from Spatial Objects
cleanNLPA Tidy Data Model for Natural Language Processing
cleanrHelps You to Code Cleaner
cleanTSTestbench for Univariate Time Series Cleaning
clereSimultaneous Variables Clustering and Regression
clesprComposite Likelihood Estimation for Spatial Data
clevrClustering and Link Prediction Evaluation in R
clhsConditioned Latin Hypercube Sampling
cliHelpers for Developing Command Line Interfaces
cliappCreate Rich Command Line Applications
ClickClustModel-Based Clustering of Categorical Sequences
ClickClustContMixtures of Continuous Time Markov Models
clickRSemi-Automatic Preprocessing of Messy Data with Change Tracking for Dataset Cleaning
clickstreamAnalyzes Clickstreams Based on Markov Chains
cliffExecute Command Line Programs Interactively
cliffordArbitrary Dimensional Clifford Algebras
clifroEasily Download and Visualise Climate Data from CliFlo
CliftLRDComplex-Valued Wavelet Lifting Estimators of the Hurst Exponent for Irregularly Sampled Time Series
clikcorrCensoring Data and Likelihood-Based Correlation Estimation
climaemetClimate AEMET Tools
climateInterface to Download Meteorological (and Hydrological) Datasets
climateStabilityEstimating Climate Stability from Climate Model Data
climatolClimate Tools (Series Homogenization and Derived Products)
climatrendsClimate Variability Indices for Ecological Modelling
ClimClassClimate Classification According to Several Indices
climdex.pcicPCIC Implementation of Climdex Routines
ClimDownClimate Downscaling Library for Daily Climate Model Output
climeConstrained L1-minimization for Inverse (covariance) Matrix Estimation
climextRemesTools for Analyzing Climate Extremes
ClimIndClimate Indices
ClimMobToolsAPI Client for the 'ClimMob' Platform
ClimProjDiagsSet of Tools to Compute Various Climate Indices
climwinClimate Window Analysis
clinDataReviewClinical Data Review Tool
clinDRSimulation and Analysis Tools for Clinical Dose Response Modeling
clinfunClinical Trial Design and Data Analysis Functions
ClinicalTrialSummarySummary Measures for Clinical Trials with Survival Outcomes
ClinicalUtilityRecalRecalibration Methods for Improved Clinical Utility of Risk Scores
clinmonHemodynamic Calculations from Clinical Monitoring
clinPKClinical Pharmacokinetics Toolkit
clinsigClinical Significance Functions
ClinSigMeasuresClinical Significance Measures
clinspacyClinical Natural Language Processing using 'spaCy', 'scispaCy', and 'medspaCy'
clintoolsTools for Clinical Research
clinUtiDNAClinical Utility of DNA Testing
clinUtilsGeneral Utility Functions for Analysis of Clinical Data
clippCalculating Likelihoods by Pedigree Paring
cliprRead and Write from the System Clipboard
CliquePercolationClique Percolation for Networks
clisymbolsUnicode Symbols at the R Prompt
CLMEConstrained Inference for Linear Mixed Effects Models
clockDate-Time Types and Tools
clockifyA Wrapper for the 'Clockify' API
clogitboostBoosting Conditional Logit Model
clogitL1Fitting Exact Conditional Logistic Regression with Lasso and Elastic Net Penalties
clogitLassoSparse Conditional Logistic Regression for Matched Studies
CloneSeekerSeeking and Finding Clones in Copy Number and Sequencing Data
CLONETv2Clonality Estimates in Tumor
clordrComposite Likelihood Inference and Diagnostics for Replicated Spatial Ordinal Data
cloudmlInterface to the Google Cloud Machine Learning Platform
cloudosR Client Library for CloudOS
cloudstoRSimplifies Access to Cloudstor API
cloudUtilCloud Utilization Plots
clpAPIR Interface to C API of COIN-or Clp
clrCurve Linear Regression via Dimension Reduction
CLSOCPA smoothing Newton method SOCP solver
clttoolsCentral Limit Theorem Experiments (Theoretical and Simulation)
clubSandwichCluster-Robust (Sandwich) Variance Estimators with Small-Sample Corrections
clueCluster Ensembles
ClueRCluster Evaluation
CluMPClustering of Micro Panel Data
ClusBootBootstrap Clustering
cluscovClustered Covariate Regression
ClusPredSimultaneous Semi-Parametric Estimation of Clustering and Regression
clusrankWilcoxon Rank Tests for Clustered Data
ClussClusterSimultaneous Detection of Clusters and Cluster-Specific Genes in High-Throughput Transcriptome Data
clust.bin.pairStatistical Methods for Analyzing Clustered Matched Pair Data
ClustAssessTools for Assessing Clustering
ClustBlockClustering of Datasets
clustcurvDetermining Groups in Multiples Curves
clustDRMClustering Dose-Response Curves and Fitting Appropriate Models to Them
clustEffClusters of Effects Curves in Quantile Regression Models
cluster"Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al.
cluster.datasetsCluster Analysis Data Sets
Cluster.OBeuCluster Analysis 'OpenBudgets.eu'
clusterabilityPerforms Tests for Cluster Tendency of a Data Set
ClusterBootstrapAnalyze Clustered Data with Generalized Linear Models using the Cluster Bootstrap
clusterCritClustering Indices
clusteredinterferenceCausal Effects from Observational Studies with Clustered Interference
ClusteredMutationsLocation and Visualization of Clustered Somatic Mutations
clusterGenerationRandom Cluster Generation (with Specified Degree of Separation)
clusterGenomicsIdentifying clusters in genomics data by recursive partitioning
clusterhapClustering Genotypes in Haplotypes
ClusteringTechniques for Evaluating Clustering
clustering.sc.dpOptimal Distance-Based Clustering for Multidimensional Data with Sequential Constraint
clustermoleUnbiased Single-Cell Transcriptomic Data Cell Type Identification
clustermqEvaluate Function Calls on HPC Schedulers (LSF, SGE, SLURM, PBS/Torque)
clusternomicsIntegrative Clustering for Heterogeneous Biomedical Datasets
clusterPowerPower Calculations for Cluster-Randomized and Cluster-Randomized Crossover Trials
ClusterRGaussian Mixture Models, K-Means, Mini-Batch-Kmeans, K-Medoids and Affinity Propagation Clustering
ClusterRankTestRank Tests for Clustered Data
clusterReproReproducibility of Gene Expression Clusters
clusterSEsCalculate Cluster-Robust p-Values and Confidence Intervals
clusterSimSearching for Optimal Clustering Procedure for a Data Set
ClusterStabilityAssessment of Stability of Individual Objects or Clusters in Partitioning Solutions
clustertendCheck the Clustering Tendency
ClustGeoHierarchical Clustering with Spatial Constraints
ClustImputeK-Means Clustering with Build-in Missing Data Imputation
clustMDModel Based Clustering for Mixed Data
clustMixTypek-Prototypes Clustering for Mixed Variable-Type Data
ClustMMDDVariable Selection in Clustering by Mixture Models for Discrete Data
ClustOfVarClustering of Variables
ClusTorusPrediction and Clustering on the Torus by Conformal Prediction
clustraClustering Trajectories Anchored at Intervention Time
clusTransitionMonitor Changes in Cluster Solutions of Dynamic Datasets
clustrdMethods for Joint Dimension Reduction and Clustering
clustreeVisualise Clusterings at Different Resolutions
clustringrCluster Strings by Edit-Distance
CLUSTShinyInteractive Document for Working with Cluster Analysis
clustsigSignificant Cluster Analysis
ClustVarLVClustering of Variables Around Latent Variables
clustvarselVariable Selection for Gaussian Model-Based Clustering
ClusVisGaussian-Based Visualization of Gaussian and Non-Gaussian Model-Based Clustering
clvCluster Validation Techniques
clValidValidation of Clustering Results
CLVToolsTools for Customer Lifetime Value Estimation
cmaesCovariance Matrix Adapting Evolutionary Strategy
cmaesrCovariance Matrix Adaptation Evolution Strategy
CMAPSSCommercial Modular Aero-Propulsion System Simulation Data Set
CMapVizRepresentation Tool For Output Of Connectivity Map (CMap) Analysis
cmaRsImplementation of the Conic Multivariate Adaptive Regression Splines in R
CMatchingMatching Algorithms for Causal Inference with Clustered Data
CMCCronbach-Mesbah Curve
cmceComputer Model Calibration for Deterministic and Stochastic Simulators
cmdfunFramework for Building Interfaces to Shell Commands
cmenetBi-Level Selection of Conditional Main Effects
CMFCollective Matrix Factorization
cmfrecCollective Matrix Factorization for Recommender Systems
CMLSConstrained Multivariate Least Squares
cmmCategorical Marginal Models
cmmrCEU Mass Mediator RESTful API
cmnaComputational Methods for Numerical Analysis
cmoceanBeautiful Colour Maps for Oceanography
CMplotCircle Manhattan Plot
cmprskSubdistribution Analysis of Competing Risks
cmprskcoxmsmUse IPW to Estimate Treatment Effect under Competing Risks
cmprskQRAnalysis of Competing Risks Using Quantile Regressions
cmpsRR Implementation of Congruent Matching Profile Segments Method
cmRAnalysis of Cardiac Magnetic Resonance Images
cmrutilsMisc Functions of the Center for Mathematical Research
cmsCalculate Medicare Reimbursement
cmsafA Toolbox for CM SAF NetCDF Data
cmsafopsTools for CM SAF NetCDF Data
cmsafvisTools to Visualize CM SAF NetCDF Data
CMShinyInteractive Document for Working with Confusion Matrix
cmstatrStatistical Methods for Composite Material Data
cmvnormThe Complex Multivariate Gaussian Distribution
cnaCausal Modeling with Coincidence Analysis
CNAIMCommon Network Asset Indices Methodology (CNAIM)
cnaOptOptimizing Consistency and Coverage in Configurational Causal Modeling
cnbdistrConditional Negative Binomial Distribution
cncaGUICanonical Non-Symmetrical Correspondence Analysis in R
CNLTregComplex-Valued Wavelet Lifting for Signal Denoising
CNLTtsaComplex-Valued Wavelet Lifting for Univariate and Bivariate Time Series Analysis
CNOGproCopy Numbers of Genes in prokaryotes
cNORMContinuous Norming
CNprepPre-process DNA Copy Number (CN) Data for Detection of CN Events
CNPSNonparametric Statistics
cnsColor Naming System
CNullFast Algorithms for Frequency-Preserving Null Models in Ecology
cnumChinese Numerals Processing
CNVRGDirichlet Multinomial Modeling of Relative Abundance Data
CNVScopeA Versatile Toolkit for Copy Number Variation Relationship Data Analysis and Visualization
coalescentMCMCMCMC Algorithms for the Coalescent
coalitionsBayesian "Now-Cast" Estimation of Event Probabilities in Multi-Party Democracies
coarseDataToolsAnalysis of Coarsely Observed Data
cobaltCovariate Balance Tables and Plots
cobiclustBiclustering via Latent Block Model Adapted to Overdispersed Count Data
COBRANonlinear Aggregation of Predictors
cobsConstrained B-Splines (Sparse Matrix Based)
cocaCluster-of-Clusters Analysis
cocktailApp'shiny' App to Discover Cocktails
CoClustCopula Based Cluster Analysis
COCONUTCOmbat CO-Normalization Using conTrols (COCONUT)
cocorComparing Correlations
cocorrespCo-Correspondence Analysis Methods
cocronStatistical Comparisons of Two or more Alpha Coefficients
codaOutput Analysis and Diagnostics for MCMC
coda.baseA Basic Set of Functions for Compositional Data Analysis
codadiagsMarkov chain Monte Carlo burn-in based on "bridge" statistics
codalmTransformation-Free Linear Regression for Compositional Outcomes and Predictors
CodataGSGenomic Prediction Using SNP Codata
cOdeAutomated C Code Generation for 'deSolve', 'bvpSolve'
codebookAutomatic Codebooks from Metadata Encoded in Dataset Attributes
codebreakerRetro Logic Game
codeCollectionCollection of Codes with Labels
CodeDependsAnalysis of R Code for Reproducible Research and Code Comprehension
codemetaA Smaller 'codemetar' Package
codenameGeneration of Code Names for Organizations, People, Projects, and Whatever Else
codepMultiscale Codependence Analysis
coderDeterministic Categorization of Items Based on External Code Data
codetoolsCode Analysis Tools for R
codexcopdThe CODEX (Comorbidity, Obstruction, Dyspnea, and Previous Severe Exacerbations) Index: Short and Medium-Term Prognosis in Patients Hospitalized for Chronic Obstructive Pulmonary Disease (COPD) Exacerbations
codifiedProduce Standard/Formalized Demographics Tables
CoDiNACo-Expression Differential Network Analysis
codingMatricesAlternative Factor Coding Matrices for Linear Model Formulae
codynCommunity Dynamics Metrics
coefficientalphaRobust Coefficient Alpha and Omega with Missing and Non-Normal Data
coefplotPlots Coefficients from Fitted Models
coenoclinerCoenocline Simulation
coenoflexGradient-Based Coenospace Vegetation Simulator
coexistSpecies coexistence modeling and analysis
cofadContrast Analyses for Factorial Designs
cofeatureRGenerate Cofeature Matrices
coffeeChronological Ordering for Fossils and Environmental Events
CoFRAComplete Functional Regulation Analysis
cogaConvolution of Gamma Distributions
cogmaprCognitive Mapping Tools Based on Coding of Textual Sources
cognitoRAuthentication for 'Shiny' Apps with 'Amazon Cognito'
CohortPlatSimulation of Cohort Platform Trials for Combination Treatments
cohortsCohort Analysis Made Easy
cohorttoolsCohort Data Analyses
coilContextualization and Evaluation of COI-5P Barcode Data
CoImpCopula Based Imputation Method
coinConditional Inference Procedures in a Permutation Test Framework
coinmarketcaprGet 'Cryptocurrencies' Market Cap Prices from Coin Market Cap
CoinMinDSimultaneous Confidence Interval for Multinomial Proportion
CoinprofileCoincident Profile
COINrComposite Indicator Construction and Analysis
cointmonitoRConsistent Monitoring of Stationarity and Cointegrating Relationships
cointRegParameter Estimation and Inference in a Cointegrating Regression
coldCount Longitudinal Data
colfConstrained Optimization on Linear Function
collapseAdvanced and Fast Data Transformation
CollapseLevelsCollapses Levels, Computes Information Value and WoE
collapsibleTreeInteractive Collapsible Tree Diagrams using 'D3.js'
collateralQuickly Evaluate Captured Side Effects
collectArgsQuickly and Neatly Collect Arguments from One Environment to Pass to Another
collectionsHigh Performance Container Data Types
collidrCheck for Namespace Collisions Across Packages and Functions on CRAN
collinEffects of Collinearity in Distributed Lag and Other Models
CollocInferCollocation Inference for Dynamic Systems
collpcmCollapsed Latent Position Cluster Model for Social Networks
collUtilsAuxiliary Package for Package 'CollapsABEL'
colmozzieDengue Cases and Climate Variables in Colombo Sri Lanka
colocColocalisation Tests of Two Genetic Traits
colocalizationNormalized Spatial Intensity Correlation
colocalizedClusters of Colocalized Sequences
colocrConduct Co-Localization Analysis of Fluorescence Microscopy Images
colorblindcheckCheck Color Palettes for Problems with Color Vision Deficiency
colorBlindnessSafe Color Set for Color Blindness
colorDFColorful Data Frames in R Terminal
colordistanceDistance Metrics for Image Color Similarity
coloredICAImplementation of Colored Independent Component Analysis and Spatial Colored Independent Component Analysis
colorednoiseSimulate Temporally Autocorrelated Populations
colorfindrExtract Colors from Windows BMP, JPEG, PNG, TIFF, and SVG Format Images
colorfulVennPlotPlot and add custom coloring to Venn diagrams for 2-dimensional, 3-dimensional and 4-dimensional data
colorhcplotColorful Hierarchical Clustering Dendrograms
colorhexColors and Palettes from Color-Hex
coloristColoring Wildlife Distributions in Space-Time
colorizerColorize Old Images Using the 'DeOldify' Image Colorization API
colormapColor Palettes using Colormaps Node Module
ColorNameRGive Colors a Name
ColorPaletteColor Palettes Generator
colorpatchOptimized Rendering of Fold Changes and Confidence Values
colorrColor Palettes for EPL, MLB, NBA, NHL, and NFL Teams
colorRampsBuilds color tables
colorscienceColor Science Methods and Data
colorspaceA Toolbox for Manipulating and Assessing Colors and Palettes
colorSpecColor Calculations with Emphasis on Spectral Data
colortoolsTools for colors in a Hue-Saturation-Value (HSV) color model
colourloversR Client for the COLOURlovers API
colourpickerA Colour Picker Tool for Shiny and for Selecting Colours in Plots
colourvaluesAssigns Colours to Values
colourvisionColour Vision Models
colrFunctions to Select and Rename Data
coltCommand-Line Color Themes
comatCreates Co-Occurrence Matrices of Spatial Data
comatoAnalysis of Concept Maps and Concept Landscapes
COMBATA Combined Association Test for Genes using Summary Statistics
combinatcombinatorics utilities
combinationpvaluesCombination of Independent P-Values
combinedeventsCalculate Scores and Marks for Track and Field Combined Events
CombinePortfolioEstimation of Optimal Portfolio Weights by Combining Simple Portfolio Strategies
CombinePValueCombine a Vector of Correlated p-values
CombinSConstruction Methods of some Series of PBIB Designs
combirocSelection and Ranking of Omics Biomarkers Combinations Made Easy
combiterCombinatorics Iterators
CombMSCCombined Model Selection Criteria
comclimCommunity Climate Statistics
cometExactTestExact Test from the Combinations of Mutually Exclusive Alterations (CoMEt) Algorithm
cometr'Comet' API for R
comfModels and Equations for Human Comfort Research
comFuncsCommonly Used Functions for R Shiny Applications
ComICSComputational Methods for Immune Cell-Type Subsets
CoMiReConvex Mixture Regression
CommEcolCommunity Ecology Analyses
commentrPrint Nicely Formatted Comments for Use in Script Files
CommonJavaJarsUseful Libraries for Building a Java Based GUI under R
commonmarkHigh Performance CommonMark and Github Markdown Rendering in R
CommonMean.CopulaCommon Mean Vector under Copula Models
commonsMathJAR Files of the Apache Commons Mathematics Library
CommTComparative Phylogeographic Analysis using the Community Tree Framework
communicationFeature Extraction and Model Estimation for Audio of Human Speech
CommunityCorrelogramEcological Community Correlogram
comorbidityComputing Comorbidity Scores
Comp2ROCCompare Two ROC Curves that Intersect
CompackRegression with Compositional Covariates
compactrCreates empty plots with compact axis notation
comparatorComparison Functions for Clustering and Record Linkage
compareComparing Objects for Differences
compareCCompare Two Correlated C Indices with Right-censored Survival Outcome
CompareCausalNetworksInterface to Diverse Estimation Methods of Causal Networks
CompAREdesignStatistical Functions for the Design of Studies with Composite Endpoints
compareDFDo a Git Style Diff of the Rows Between Two Dataframes with Similar Structure
compareGroupsDescriptive Analysis by Groups
compareODMcomparison of medical forms in CDISC ODM format
comparerCompare Output and Run Time
CompareTestsCorrect for Verification Bias in Diagnostic Accuracy & Agreement
comparisonMultivariate Likelihood Ratio Calculation and Evaluation
ComparisonCRComparison of Cumulative Incidence Between Two Groups Under Competing Risks
ComparisonSurvComparison of Survival Curves Between Two Groups
compasConformational Manipulations of Protein Atomic Structures
CompDistMultisection Composite Distributions
comperankRanking Methods for Competition Results
comperesManage Competition Results
competitiontoolboxA Graphical User Interface for Antitrust and Trade Practitioners
compHclustComplementary Hierarchical Clustering
CompindComposite Indicators Functions
completejourneyRetail Shopping Data
complexityCalculate the Proportion of Permutations in Line with an Informative Hypothesis
complexNetComplex Network Generation
complexplusFunctions of Complex or Real Variable
ComplexUpsetCreate Complex UpSet Plots Using 'ggplot2' Components
complmrobRobust Linear Regression with Compositional Data as Covariates
CompLognormalFunctions for actuarial scientists
CompModelsPseudo Computer Models for Optimization
COMPoissonRegConway-Maxwell Poisson (COM-Poisson) Regression
CompositionalCompositional Data Analysis
compositionsCompositional Data Analysis
compositsCompositional, Multivariate and Univariate Time Series Outlier Ensemble
compound.CoxUnivariate Feature Selection and Compound Covariate for Predicting Survival
CompoundEventsStatistical Modeling of Compound Events
CompoundingComputing Continuous Distributions
CompQuadFormDistribution Function of Quadratic Forms in Normal Variables
CompRPaired Comparison Data Analysis
CompRandFldComposite-Likelihood Based Analysis of Random Fields
comprehenrList Comprehensions
compute.esCompute Effect Sizes
comsimitvFlexible Framework for Simulating Community Assembly
comtradrInterface with the United Nations Comtrade API
con2aqiCalculate the AQI from Pollutant Concentration
con2lkiCalculate the Dutch Air Quality Index (LKI)
ConakeContinuous Associated Kernel Estimation
concatenateHuman-Friendly Text from Unknown Strings
concatipedeEasy Concatenation of Fasta Sequences
concavemanA Very Fast 2D Concave Hull Algorithm
conclustPairwise Constraints Clustering
ConConPiWiFunOptimisation with Continuous Convex Piecewise (Linear and Quadratic) Functions
concordanceProduct Concordance
ConcordanceTestAn Alternative to the Kruskal-Wallis Based on the Kendall Tau Distance
concorRCONCOR and Supplemental Functions
concregConcordance Regression
CONCURCopy Number Profile Curve-Based Association Test
concurveComputes & Plots Compatibility (Confidence), Surprisal, & Likelihood Distributions
condApproximate Conditional Inference for Logistic and Loglinear Models
condformatConditional Formatting in Data Frames
condGEEParameter estimation in conditional GEE for recurrent event gap times
CondIndTestsNonlinear Conditional Independence Tests
condirComputation of P Values and Bayes Factors for Conditioning Data
conditionzControl How Many Times Conditions are Thrown
condmixtConditional Density Estimation with Neural Network Conditional Mixtures
condMVNormConditional Multivariate Normal Distribution
CondRegCondition Number Regularized Covariance Estimation
condSURVEstimation of the Conditional Survival Function for Ordered Multivariate Failure Time Data
condTruncMVNConditional Truncated Multivariate Normal Distribution
conduscoQuery-Driven Pipeline Execution and Query Templates
condvisConditional Visualization for Statistical Models
condvis2Interactive Conditional Visualization for Supervised and Unsupervised Models in Shiny
coneprojPrimal or Dual Cone Projections with Routines for Constrained Regression
confVisualization and Analysis of Statistical Measures of Confidence
conf.designConstruction of factorial designs
confidenceConfidence Estimation of Environmental State Classifications
configManage Environment Specific Configuration Values
ConfigParserPackage to Parse an INI File, Including Variable Interpolation
configrAn Implementation of Parsing and Writing Configuration File (JSON/INI/YAML/TOML)
configuralMultivariate Profile Analysis
confinterpretDescriptive Interpretations of Confidence Intervals
confintrConfidence Intervals
ConfIntVarianceConfidence Interval for the Univariate Population Variance without Normality Assumption
conflictedAn Alternative Conflict Resolution Strategy
conflrClient for 'Confluence' API
conformalClassificationTransductive and Inductive Conformal Predictions for Classification Problems
ConformalSmallestEfficient Tuning-Free Conformal Prediction
confoundrDiagnostics for Confounding of Time-Varying and Other Joint Exposures
confreqConfigural Frequencies Analysis Using Log-Linear Modeling
confSAMEstimates and Bounds for the False Discovery Proportion, by Permutation
ConfusionTableRConfusion Matrix Toolset
CongreveLamsdell2016Distance Metrics for Trees Generated by Congreve and Lamsdell
CoNICorrelation Guided Network Integration (CoNI)
conicfitAlgorithms for Fitting Circles, Ellipses and Conics Based on the Work by Prof. Nikolai Chernov
conicsPlot Conics
ConigraveFlexible Tools for Multiple Imputation
conjointAn Implementation of Conjoint Analysis Method
ConjointChecksA package to check the cancellation axioms of conjoint measurement
conjurerA Parametric Method for Generating Synthetic Data
conleyregEstimations using Conley Standard Errors
conmetConstruct Measurement Evaluation Tool
ConNEcTContingency Measure-Based Networks for Binary Time Series
connectwidgetsOrganize and Curate Your Content Within 'RStudio Connect'
ConnMatToolsTools for Working with Connectivity Data
conogiveCongeneric Normal-Ogive Model
conosClustering on Network of Samples
conover.testConover-Iman Test of Multiple Comparisons Using Rank Sums
conquerConvolution-Type Smoothed Quantile Regression
conquestrAn R Front End for 'ACER ConQuest'
ConRComputation of Parameters Used in Preliminary Assessment of Conservation Status
conserveRIdentifying Conservation Prioritization Methods Based on Data Availability
consortCreate Consort Diagram
consortrInteractive Consort Flow Diagrams
ConSplinePartial Linear Least-Squares Regression using Constrained Splines
ConsRankCompute the Median Ranking(s) According to the Kemeny's Axiomatic Approach
ConsRankClassClassification and Clustering of Preference Rankings
ConsRegFits Regression & ARMA Models Subject to Constraints to the Coefficient
constantsReference on Constants, Units and Uncertainty
constellationIdentify Event Sequences Using Time Series Joins
constrainedKrigingConstrained, Covariance-Matching Constrained and Universal Point or Block Kriging
conStructModels Spatially Continuous and Discrete Population Genetic Structure
contactCreating Contact and Social Networks
contactdataSocial Contact Matrices for 152 Countries
containerExtending Base R List
ContaminatedMixtClustering and Classification with the Contaminated Normal
contentidAn Interface for Content-Based Identifiers
conText'a la Carte' on Text (ConText) Embedding Regression
contfracContinued Fractions
contingBayesian Analysis of Contingency Tables
contingencyDiscrete Multivariate Probability Distributions
contoureRContouring of Non-Regular Three-Dimensional Data
ContourFunctionsCreate Contour Plots from Data or a Function
contourPlotPlots x,y,z Co-Ordinates in a Contour Map
contrastA Collection of Contrast Methods
contributionA Tiny Contribution Table Generator Based on 'ggplot2'
controlA Control Systems Toolbox
controlTestQuantile Comparison for Two-Sample Right-Censored Survival Data
contTimeCausalContinuous Time Causal Models
convdistrConvolute Probabilistic Distributions
ConvergenceClubsFinding Convergence Clubs
ConvergenceConceptsSeeing Convergence Concepts in Action
convergEUMonitoring Convergence of EU Countries
convertGraphConvert Graphical Files Format
convertidConvert Gene IDs Between Each Other and Fetch Annotations from Biomart
convertrConvert Between Units
convevolAnalysis of Convergent Evolution
convexjlrDisciplined Convex Programming in R using 'Convex.jl'
conveyIncome Concentration Analysis with Complex Survey Samples
ConvolutionerConvolution of Data
convoSPATConvolution-Based Nonstationary Spatial Modeling
cooccurProbabilistic Species Co-Occurrence Analysis in R
CoOLCauses of Outcome Learning
coopCo-Operation: Fast Covariance, Correlation, and Cosine Similarity Operations
CoopGameImportant Concepts of Cooperative Game Theory
coopProductGameCooperative Aspects of Linear Production Programming Problems
cooptreesCooperative aspects of optimal trees in weighted graphs
CoordinateCleanerAutomated Cleaning of Occurrence Records from Biological Collections
copBasicGeneral Bivariate Copula Theory and Many Utility Functions
copCARFitting the copCAR Regression Model for Discrete Areal Data
CopCTSCopula-Based Semiparametric Analysis for Time Series Data with Detection Limits
copeCoverage Probability Excursion (CoPE) Sets
copentEstimating Copula Entropy and Transfer Entropy
CopernicusDEMCopernicus Digital Elevation Models
coppeCosenzaRCOPPE-Cosenza Fuzzy Hierarchy Model
copsCluster Optimized Proximity Scaling
copulaMultivariate Dependence with Copulas
Copula.MarkovCopula-Based Estimation and Statistical Process Control for Serially Correlated Time Series
Copula.Markov.survivalCopula Markov Model with Dependent Censoring
Copula.survAssociation Analysis of Bivariate Survival Data Based on Copulas
CopulaCenRCopula-Based Regression Models for Bivariate Censored Data
copulaDataData Sets for Copula Modeling
CopulaDTACopula Based Bivariate Beta-Binomial Model for Diagnostic Test Accuracy Studies
copulaedasEstimation of Distribution Algorithms Based on Copulas
copularegCopula Regression
CopulaREMADACopula Mixed Models for Multivariate Meta-Analysis of Diagnostic Test Accuracy Studies
CopyDetectComputing Response Similarity Indices for Multiple-Choice Tests
coraCora Data for Entity Resolution
coRankingCo-Ranking Matrix
corazonApply 'colorffy' Color Gradients Within 'shiny' Elements
CorbiCollection of Rudimentary Bioinformatics Tools
CorBinGenerate High-Dimensional Binary Data with Correlation Structures
corclassCorrelational Class Analysis
cordCommunity Estimation in G-Models via CORD
CorDiffSet-Based Differential Covariance Testing for Genomics
cordilleraCalculation of the OPTICS Cordillera
CORECores of Recurrent Events
coreCTProgrammatic Analysis of Sediment Cores Using Computed Tomography Imaging
coreheatCorrelation Heatmaps
corehunterMulti-Purpose Core Subset Selection
CORElearnClassification, Regression and Feature Evaluation
corelsR Binding for the 'Certifiably Optimal RulE ListS (Corels)' Learner
coreNLPWrappers Around Stanford CoreNLP Tools
coreSimCore Functionality for Simulating Quantities of Interest from Generalised Linear Models
coreTDTTDT for compound heterozygous and recessive models
corHMMHidden Markov Models of Character Evolution
corkscrewPreprocessor for Data Modeling
corlinkRecord Linkage, Incorporating Imputation for Missing Agreement Patterns, and Modeling Correlation Patterns Between Fields
CORMThe Clustering of Regression Models Method
corncobCount Regression for Correlated Observations with the Beta-Binomial
CornerstoneRCollection of Scripts for Interface Between 'Cornerstone' and 'R'
cornetElastic Net with Dichotomised Outcomes
coro'Coroutines' for R
coroICAConfounding Robust Independent Component Analysis for Noisy and Grouped Data
coronaCoronavirus ('Rona') Data Exploration
coronavirusThe 2019 Novel Coronavirus COVID-19 (2019-nCoV) Dataset
corpcorEfficient Estimation of Covariance and (Partial) Correlation
corporaStatistics and Data Sets for Corpus Frequency Data
corporaexplorerA 'Shiny' App for Exploration of Text Collections
CoRpowerPower Calculations for Assessing Correlates of Risk in Clinical Efficacy Trials
corpusText Corpus Analysis
corpustoolsManaging, Querying and Analyzing Tokenized Text
corr2DImplementation of 2D Correlation Analysis in R
corrarrayCorrelation Arrays and 2-Sample Correlation Matrices
CorrBinNonparametrics with Clustered Binary and Multinomial Data
corrcoverageCorrecting the Coverage of Credible Sets from Bayesian Genetic Fine Mapping
corrDNAFinding Associations in Position-Wise Aligned DNA Sequence Dataset
correctedAUCCorrecting AUC for Measurement Error
CorrectedFDRCorrecting False Discovery Rates
CorrectOverloadedPeaksCorrect Overloaded Peaks from GC-APCI-MS Data
corregpFunctions and Methods for Correspondence Regression
correlationMethods for Correlation Analysis
correlationfunnelSpeed Up Exploratory Data Analysis (EDA) with the Correlation Funnel
correlbinomCorrelated Binomial Probabilities
corrgramPlot a Correlogram
corrgrapherExplore Correlations Between Variables in a Machine Learning Model
CorrMixedEstimate Correlations Between Repeatedly Measured Endpoints (E.g., Reliability) Based on Linear Mixed-Effects Models
corrplotVisualization of a Correlation Matrix
corrrCorrelations in R
CorrToolBoxModeling Correlational Magnitude Transformations in Discretization Contexts
corsetArbitrary Bounding of Series and Time Series Objects
cortSome Empiric and Nonparametric Copula Models
corTestRobust Tests for Equal Correlation
cortoInference of Gene Regulatory Networks
corToolsTools for processing data after a Genome Wide Association Study
corxCreate and Format Correlation Matrices
cosaBound Constrained Optimal Sample Size Allocation
COSINECOndition SpecIfic sub-NEtwork
cosinorTools for estimating and predicting the cosinor model
cosinor2Extended Tools for Cosinor Analysis of Rhythms
cosmoFnsFunctions for cosmological distances, times, luminosities, etc
CoSMoSComplete Stochastic Modelling Solution
cossoFit Regularized Nonparametric Regression Models Using COSSO Penalty
COSTCopula-Based Semiparametric Models for Spatio-Temporal Data
costatTime Series Costationarity Determination
costsensitiveCost-Sensitive Multi-Class Classification
CosWThe CosW Distribution
CoTiMAContinuous Time Meta-Analysis ('CoTiMA')
cotramCount Transformation Models
cotrendConsistent Co-Trending Rank Selection
couchDBConnect to and Work with CouchDB Databases
COUNTFunctions, Data and Code for Count Data
countcolorsLocates and Counts Pixels Within Color Range(s) in Images
countdataThe Beta-Binomial Test for Count Data
CounterfactualEstimation and Inference Methods for Counterfactual Analysis
countfitteRComprehensive Automatized Evaluation of Distribution Models for Count Data
countgmifsDiscrete Response Regression for High-Dimensional Data
countHMMPenalized Estimation of Flexible Hidden Markov Models for Time Series of Counts
CountrFlexible Univariate Count Models Based on Renewal Processes
countrycodeConvert Country Names and Country Codes
CountsEPPMMean and Variance Modeling of Count Data
countToFPKMConvert Counts to Fragments per Kilobase of Transcript per Million (FPKM)
countTransformersTransform Counts in RNA-Seq Data Analysis
countyfloodsQuantify United States County-Level Flood Measurements
countytimezonesConvert from UTC to Local Time for United States Counties
COUSCOusA Residue-Residue Contact Detecting Method
covafillrLocal Polynomial Regression of State Dependent Covariates in State-Space Models
covatestTests on Properties of Space-Time Covariance Functions
covBMBrownian Motion Processes for 'nlme'-Models
CovCombRCombine Partial Covariance / Relationship Matrices
coveffectsplotProduce Forest Plots to Visualize Covariate Effects
covequalTest for Equality of Covariance Matrices
covfefeCovfefy Any Word, Sentence or Speech
covglassoSparse Covariance Matrix Estimation
COVID19R Interface to COVID-19 Data Hub
covid19.analyticsLoad and Analyze Live Data from the COVID-19 Pandemic
covid19brBrazilian COVID-19 Pandemic Data
covid19dbcandSelected 'Drugbank' Drugs for COVID-19 Treatment Related Data in R Format
covid19franceCases of COVID-19 in France
covid19indiaPulling Clean Data from Covid19india.org
covid19italyThe 2019 Novel Coronavirus COVID-19 (2019-nCoV) Italy Dataset
covid19sfThe Covid19 San Francisco Dataset
covid19swissCOVID-19 Cases in Switzerland and Principality of Liechtenstein
covid19usCases of COVID-19 in the United States
covidcastClient for Delphi's 'COVIDcast Epidata' API
COVIDIBGEDownloading, Reading and Analysing PNAD COVID19 Microdata
CovidMutationsMutation Analysis Toolkit for COVID-19 (Coronavirus Disease 2019)
covidprobabilityEstimate the Unit-Wide Probability of COVID-19
covidregionaldataSubnational Data for COVID-19 Epidemiology
covidsymptomCOVID Symptom Study Sweden Open Dataset
covLCALatent Class Models with Covariate Effects on Underlying and Measured Variables
covrTest Coverage for Packages
covregA simultaneous regression model for the mean and covariance
covRobustRobust Covariance Estimation via Nearest Neighbor Cleaning
CovSelModel-Free Covariate Selection
CovSelHighModel-Free Covariate Selection in High Dimensions
covsepTests for Determining if the Covariance Structure of 2-Dimensional Data is Separable
covsimVITA, IG and PLSIM Simulation for Given Covariance and Marginals
covTestRCovariance Matrix Tests
CovToolsStatistical Tools for Covariance Analysis
cowbellPerforms Segmented Linear Regression on Two Independent Variables
cowplotStreamlined Plot Theme and Plot Annotations for 'ggplot2'
cowsayMessages, Warnings, Strings with Ascii Animals
coxedDuration-Based Quantities of Interest for the Cox Proportional Hazards Model
CoxICPenVariable Selection for Cox's Model with Interval-Censored Data
coxintervalCox-Type Models for Interval-Censored Data
coxmeMixed Effects Cox Models
coxphfCox Regression with Firth's Penalized Likelihood
CoxPhLbAnalyzing Right-Censored Length-Biased Data
coxphMICSparse Estimation of Cox Proportional Hazards Models via Approximated Information Criterion
coxphSGDStochastic Gradient Descent log-Likelihood Estimation in Cox Proportional Hazards Model
coxphwWeighted Estimation in Cox Regression
CoxPlusCox Regression (Proportional Hazards Model) with Multiple Causes and Mixed Effects
CoxR2R-Squared Measure Based on Partial LR Statistic, for the Cox PH Regression Model
coxrobustRobust Estimation in Cox Model
coxrtCox Proportional Hazards Regression for Right-Truncated Data
coxseiFitting a CoxSEI Model
CPConditional Power Calculations
cp4pCalibration Plot for Proteomics
cpaConfirmatory Path Analysis through the d-sep tests
CPATChange Point Analysis Tests
CPBayesBayesian Meta Analysis for Studying Cross-Phenotype Genetic Associations
cpcaMethods to perform Common Principal Component Analysis (CPCA)
cPCGEfficient and Customized Preconditioned Conjugate Gradient Method for Solving System of Linear Equations
cpdComplex Pearson Distributions
CpGassocAssociation Between Methylation and a Phenotype of Interest
CpGFilterCpG Filtering Method Based on Intra-Class Correlation Coefficients
CPGLIBCompeting Proximal Gradients Library
cpkClinical Pharmacokinetics
cplmCompound Poisson Linear Models
cpmSequential and Batch Change Detection Using Parametric and Nonparametric Methods
CPMCGLMCorrection of the P-Value after Multiple Coding in Generalized Linear Models
CPNCoverageAnalysisConceptual Properties Norming Studies as Parameter Estimation
CPPComposition of Probabilistic Preferences (CPP)
cpp11A C++11 Interface for R's C Interface
cppRoutingFast Implementation of Dijkstra Algorithm
cprControl Polygon Reduction
CprobThe Conditional Probability Function of a Competing Event
cprobitConditional Probit Model for Analysing Continuous Outcomes
cprrFunctions for Working with Danish CPR Numbers
cPseudoMaRgConstructs a Correlated Pseudo-Marginal Sampler
cpsRLoad CPS Microdata into R Using the 'Census Bureau Data' API
cpssChange-Point Detection by Sample-Splitting Methods
CPsurvNonparametric Change Point Estimation for Survival Data
cpsurvsimSimulating Survival Data from Change-Point Hazard Distributions
cpsvoteA Toolbox for Using the CPS’s Voting and Registration Supplement
cptClassification Permutation Test
cptcity'cpt-city' Colour Gradients
cptecAn Interface to the 'CPTEC/INPE' API
cqcrAccess 'Care Quality Commission' Data
cqrRegQuantile, Composite Quantile Regression and Regularized Versions
cquadConditional Maximum Likelihood for Quadratic Exponential Models for Binary Panel Data
CRACCosmology R Analysis Code
craggTests for Weak Instruments in R
cramerMultivariate Nonparametric Cramer-Test for the Two-Sample-Problem
crandepNetwork Analysis of Dependencies of CRAN Packages
crankCompleting Ranks
cranlikeTools for 'CRAN'-Like Repositories
cranlogsDownload Logs from the 'RStudio' 'CRAN' Mirror
cranlyPackage Directives and Collaboration Networks in CRAN
CRANsearcherRStudio Addin for Searching Packages in CRAN Database Based on Keywords
crantasticVarious R tools for http://crantastic.org/
crassmatConditional Random Sampling Sparse Matrices
crawlFit Continuous-Time Correlated Random Walk Models to Animal Movement Data
crayonColored Terminal Output
crchCensored Regression with Conditional Heteroscedasticity
crctStepdownUnivariate Analysis of Cluster Trials with Multiple Outcomes
CREAMClustering of Genomic Regions Analysis Method
credentialsTools for Managing SSH and Git Credentials
CreditMetricsFunctions for calculating the CreditMetrics risk model
creditmodelToolkit for Credit Modeling, Analysis and Visualization
CreditRiskEvaluation of Credit Risk with Structural and Reduced Form Models
credsubsCredible Subsets
creduleCredit Default Swap Functions
creggSimple Conjoint Tidying, Analysis, and Visualization
cRegulomeObtain and Visualize Regulome-Gene Expression Correlations in Cancer
CRFConditional Random Fields
crfsuiteConditional Random Fields for Labelling Sequential Data in Natural Language Processing
cricketrAnalyze Cricketers and Cricket Teams Based on ESPN Cricinfo Statsguru
crimCVGroup-Based Modelling of Longitudinal Data
crimedataAccess Crime Data from the Open Crime Database
crimelinkageStatistical Methods for Crime Series Linkage
crimeutilsA Comprehensive Set of Functions to Clean, Analyze, and Present Crime Data
crispFits a Model that Partitions the Covariate Space into Blocks in a Data- Adaptive Way
crispRdesignRGuide Sequence Design for CRISPR/Cas9
criticalpathAn Implementation of the Critical Path Method
critpathSetting the Critical Path
CRMContinual Reassessment Method (CRM) for Phase I Clinical Trials
crmnCCMN and Other Normalization Methods for Metabolomics Data
crmPackObject-Oriented Implementation of CRM Designs
crmRegCellwise Robust M-Regression and SPADIMO
crnDownloads and Builds datasets for Climate Reference Network
crochetImplementation Helper for '[' and '[<-' of Custom Matrix-Like Types
cromwellDashboardA Dashboard to Visualize Scientific Workflows in 'Cromwell'
CronbachCronbach's Alpha
croneStructural Crystallography in 1d
cronologiaCreate an HTML Vertical Timeline from a Data Frame in 'rmarkdown' and 'shiny'
cronRSchedule R Scripts and Processes with the 'cron' Job Scheduler
cropGraphics Cropping Tool
cropdatapeOpen Data of Agricultural Production of Crops of Peru
cropDemandSpatial Crop Water Demand for Brazil
CropDetectRCrop Row Detector
cropgrowdaysCrop Growing Degree Days and Agrometeorological Calculations
cropsChangepoints for a Range of Penalties (CROPS)
CropScapeRAccess Cropland Data Layer Data via the 'CropScape' Web Service
cropZoningClimate Crop Zoning Based in Air Temperature for Brazil
crossdesConstruction of Crossover Designs
crossmapApply Functions to All Combinations of List Elements
crossmatchThe Cross-match Test
CrossoverAnalysis and Search of Crossover Designs
crossRegConfidence intervals for crossover points of two simple regression lines
crossrunJoint Distribution of Number of Crossings and Longest Run
crosstableCrosstables for Descriptive Analyses
crosstalkInter-Widget Interactivity for HTML Widgets
CrossVAVerbal Autopsy Data Transformation for InSilicoVA and InterVA5 Algorithms
crossvalGeneric Functions for Cross Validation
CrossValidateClasses and Methods for Cross Validation of "Class Prediction" Algorithms
crosswalkrRename and Encode Data Frames Using External Crosswalk Files
crossword.rGenerating Crosswords from Word Lists
crovConstrained Regression Model for an Ordinal Response and Ordinal Predictors
crplyrA 'dplyr' Interface for Crunch
crqaRecurrence Quantification Analysis for Categorical and Continuous Time-Series
crrcbcvBias-Corrected Variance for Competing Risks Regression with Clustered Data
crrpPenalized Variable Selection in Competing Risks Regression
crrSCCompeting risks regression for Stratified and Clustered data
crrstepStepwise Covariate Selection for the Fine & Gray Competing Risks Regression Model
crsCategorical Regression Splines
crseEventStudyA Robust and Powerful Test of Abnormal Stock Returns in Long-Horizon Event Studies
crsmetaExtract Coordinate System Metadata
crsnlsNonlinear Regression Parameters Estimation by 'CRS4HC' and 'CRS4HCe'
crsoCancer Rule Set Optimization ('crso')
crsraTidying and Analyzing 'Coursera' Research Export Data
crsuggestObtain Suggested Coordinate Reference System Information for Spatial Data
crtestsClassification and Regression Tests
CRTgeeDRDoubly Robust Inverse Probability Weighted Augmented GEE Estimator
CRTSizeSample Size Estimation Functions for Cluster Randomized Trials
crulHTTP Client
crunchCrunch.io Data Tools
crunchyShiny Apps on Crunch
crutsInterface to Climatic Research Unit Time-Series Version 3.21 Data
CruzPlotPlot Shipboard DAS Data
CRWRMChanging the Reference Group without Re-Running the Model
cryStatistics for Structural Crystallography
CrypticIBDcheckIdentifying Cryptic Relatedness in Genetic Association Studies
crypto2Download Crypto Currency Data from 'CoinMarketCap' without 'API'
cryptowatchRAn API Wrapper for 'Cryptowatch'
crystCalculate the Relative Crystallinity of Starch by XRD and FTIR
csaA Cross-Scale Analysis Tool for Model-Observation Visualization and Integration
csaboundsBounds on Distributional Treatment Effect Parameters
csamplingFunctions for Conditional Simulation in Regression-Scale Models
CsChangeTesting for Change in C-Statistic
csciCurrent Status Confidence Intervals
CScloneBayesian Nonparametric Modeling in R
cSEMComposite-Based Structural Equation Modeling
CSeqpatFrequent Contiguous Sequential Pattern Mining of Text
CSESACRISPR-Based Salmonella Enterica Serotype Analyzer
CSFAConnectivity Scores with Factor Analysis
CSGoCollecting Counter Strike Global Offensive Data
cshapesThe CShapes 2.0 Dataset and Utilities
CSIndicatorsClimate Services' Indicators Based on Sub-Seasonal to Decadal Predictions
CSMESCost-Sensitive Multi-Criteria Ensemble Selection for Uncertain Cost Conditions
csnClosed Skew-Normal Distribution
csodataDownload Data from the CSO 'PxStat' API
cspecComplete Discrete Fourier Transform (DFT) and Periodogram
csppA Tool for the Correlates of State Policy Project Data
csppDataData Only: The Correlates of State Policy Project Dataset
csrplusMethods to Test Hypotheses on the Distribution of Spatial Point Processes
csSAMcsSAM - cell-specific Significance Analysis of Microarrays
cssToolsCognitive Social Structure Tools
cstabSelection of Number of Clusters via Normalized Clustering Instability
cstarSubstantive significance testing for regression estimates and marginal effects
CSTECovariate Specific Treatment Effect (CSTE) Curve
CSToolsAssessing Skill of Climate Forecasts on Seasonal-to-Decadal Timescales
csurveyConstrained Regression for Survey Data
CSUVCombined Selection and Uncertainty Visualiser (CSUV)
csvRead and Write CSV Files with Selected Conventions
csvreadFast Specialized CSV File Loader
csvwrRead and Write CSV on the Web (CSVW) Tables and Metadata
csvyImport and Export CSV Data with a YAML Metadata Header
ctaContingency Table Analysis Based on ML Fitting of MPH Models
CTAShinyInteractive Application for Working with Contingency Tables
CTDA Method for 'Connecting The Dots' in Weighted Graphs
ctfRead and Write Column Text Format (CTF)
ctgdistLikert Category Distance Calculator
ctgtClosed Testing with Globaltest for Pathway Analysis
cthreshERContinuous Threshold Expectile Regression
ctlCorrelated Trait Locus Mapping
CTMA Text Mining Toolkit for Chinese Document
ctmcdEstimating the Parameters of a Continuous-Time Markov Chain from Discrete-Time Data
ctmcmoveModeling Animal Movement with Continuous-Time Discrete-Space Markov Chains
ctmleCollaborative Targeted Maximum Likelihood Estimation
ctmmContinuous-Time Movement Modeling
CTPClosed Testing Procedure (CTP)
ctpmContinuous-Time Phylogenetic Modeling
ctqrCensored and Truncated Quantile Regression
ctrdataRetrieve and Analyze Clinical Trials in Public Registers
ctrialsgovQuery Data from U.S. National Library of Medicine's Clinical Trials Database
ctrlGeneAssess the Stability of Candidate Housekeeping Genes
ctsemContinuous Time Structural Equation Modelling
ctsemOMXContinuous Time SEM - 'OpenMx' Based Functions
CTShinyInteractive Document for Working with Classification Tree Analysis
CTShiny2Interactive Document for Working with Classification Tree Analysis
CTTClassical Test Theory Functions
CTTinShinyShiny Interface for the CTT Package
CTTShinyClassical Test Theory via Shiny
ctvCRAN Task Views
CUBA Class of Mixture Models for Ordinal Data
cubatureAdaptive Multivariate Integration over Hypercubes
cubelyrA Data Cube 'dplyr' Backend
cubeviewView 3D Raster Cubes Interactively
cubfitsCodon Usage Bias Fits
cubicBsplinesComputation of a Cubic B-Spline Basis and Its Derivatives
cubingRubik's Cube Solving
CubistRule- And Instance-Based Regression Modeling
cuda.mlR Interface for the RAPIDS cuML Suite of Libraries
CUFFCharles's Utility Function using Formula
cultevoTools, Measures and Statistical Tests for Cultural Evolution
cuml4rR Interface for the RAPIDS cuML Suite of Libraries
CUMPAnalyze Multivariate Phenotypes by Combining Univariate Results
cumSegChange Point Detection in Genomic Sequences
cumstatsCumulative Descriptive Statistics
cumulocityrClient for the 'Cumulocity' API
cuperdecCumulative Percent Decay Curve Generator
cuReParametric Cure Model Estimation
curephEMNPMLE for Logistic-Cox Cure-Rate Model
curlA Modern and Flexible Web Client for R
currentSurvivalEstimation of CCI and CLFS Functions
curryPartial Function Application with %<%, %-<%, and %><%
cursrCursor and Terminal Manipulation
curstatCIConfidence Intervals for the Current Status Model
curtailmentFinds Binary Outcome Designs Using Stochastic Curtailment
curvecompMultiple Curve Comparisons Using Parametric Bootstrap
curveDepthTukey Curve Depth and Distance in the Space of Curves
curvHDRFiltering of Flow Cytometry Samples
cuspCusp-Catastrophe Model Fitting Using Maximum Likelihood
CustomerScoringMetricsEvaluation Metrics for Customer Scoring Models Depending on Binary Classifiers
customizedTrainingCustomized Training for Lasso and Elastic-Net Regularized Generalized Linear Models
customstepsCustomizable Higher-Order Recipe Step Functions
CustosAscensorCosts Allocation for the Installation of an Elevator
cusumCumulative Sum (CUSUM) Charts for Monitoring of Hospital Performance
cusumcharterEasier CUSUM Control Charts
CUSUMdesignCompute Decision Interval and Average Run Length for CUSUM Charts
cutoffSeek the Significant Cutoff Value
cutoffRCUTOFF: A Spatio-temporal Imputation Method
cutpointrDetermine and Evaluate Optimal Cutpoints in Binary Classification Tasks
CutpointsOEHROptimal Equal-HR Method to Find Two Cutpoints for U-Shaped Relationships in Cox Model
cuttlefish.modelAn R package to perform LPUE standardization and stock assessment of the English Channel cuttlefish stock using a two-stage biomass model
cvamCoarsened Variable Modeling
cvapCitizen Voting Age Population
cvarCompute Expected Shortfall and Value at Risk for Continuous Distributions
CVarEConditional Variance Estimator for Sufficient Dimension Reduction
cvAUCCross-Validated Area Under the ROC Curve Confidence Intervals
CVcalibrationEstimation of the Calibration Equation with Error-in Observations
cvCovEstCross-Validated Covariance Matrix Estimation
cvcqvCoefficient of Variation (CV) with Confidence Intervals (CI)
cvcrandEfficient Design and Analysis of Cluster Randomized Trials
CVDColor Vision Deficiencies
CVEKCross-Validated Kernel Ensemble
cvequalityTests for the Equality of Coefficients of Variation from Multiple Groups
cvGEECross-Validated Predictions from GEE
CVglassoLasso Penalized Precision Matrix Estimation
cvmdiscCramer von Mises Tests for Discrete or Grouped Distributions
cvmgofCramer-von Mises Goodness-of-Fit Tests
cvmsCross-Validation for Model Selection
cvq2Calculate the predictive squared correlation coefficient
CVRCanonical Variate Regression
CVriskCompute Risk Scores for Cardiovascular Diseases
CVSTFast Cross-Validation via Sequential Testing
CVThreshLevel-Dependent Cross-Validation Thresholding
cvToolsCross-validation tools for regression models
CVTuningCovRegularized Estimators of Covariance Matrices with CV Tuning
cvwraprTools for Cross Validation
CVXRDisciplined Convex Optimization
cwbtoolsTools to Create, Modify and Manage 'CWB' Corpora
cwhmiscMiscellaneous Functions for Math, Plotting, Printing, Statistics, Strings, and Tools
cwmCluster Weighted Models by EM algorithm
cxhullConvex Hull
cxrA Toolbox for Modelling Species Coexistence in R
cxxfunplusextend cxxfunction by saving the dynamic shared objects
cycleRtoolsTools for Cycling Data Analysis
cyclestreetsCycle Routing and Data for Cycling Advocacy
cyclocompCyclomatic Complexity of R Code
cyclomortSurvival Modeling with a Periodic Hazard Function
CyclopsCyclic Coordinate Descent for Logistic, Poisson and Survival Analysis
cylcopCircular-Linear Copulas with Angular Symmetry for Movement Data
cymruservicesQuery 'Team Cymru' 'IP' Address, Autonomous System Number ('ASN'), Border Gateway Protocol ('BGP'), Bogon and 'Malware' Hash Data Services
cyphidCycle and Phase Identification for mastication data
cyphrHigh Level Encryption Wrappers
cystiSimAgent-Based Model for Taenia_solium Transmission and Control
CytobankAPICytobank API Wrapper for R
CytobankBridgeRBridging and Extending the CytobankAPI Package in R to the Cytobank Web Application
cytoDivCytometric diversity indices
cytofanPlot Fan Plots for Cytometry Data using 'ggplot2'
cytometreeAutomated Cytometry Gating and Annotation
cytominerMethods for Image-Based Cell Profiling
czechratesCzech Interest & Foreign Exchange Rates
czsoUse Open Data from the Czech Statistical Office in R
D2MCSData Driving Multiple Classifier System
D3GBInteractive Genome Browser with R
d3NetworkTools for creating D3 JavaScript network, tree, dendrogram, and Sankey graphs from R
D3partitionRInteractive Charts of Nested and Hierarchical Data with 'D3.js'
d3plusSeamless 'D3Plus' Integration
d3poFast and Beautiful Interactive Visualization for 'Markdown' and 'Shiny'
d3r'd3.js' Utilities for R
d3TreeCreate Interactive Collapsible Trees with the JavaScript 'D3' Library
DADiscriminant Analysis for Evolutionary Inference
DAAGData Analysis and Graphics Data and Functions
DAAGbioData Sets and Functions, for Demonstrations with Expression Arrays and Gene Sequences
daaremDamped Anderson Acceleration with Epsilon Monotonicity for Accelerating EM-Like Monotone Algorithms
dabestrData Analysis using Bootstrap-Coupled Estimation
dabrDatabase Management with R
DACFData Analysis with Ceiling and/or Floor Data
dadThree-Way / Multigroup Data Analysis Through Densities
dadjokeDisplays a Dad Joke
dadjokeapiReturn a Random Dad Joke
daeFunctions Useful in the Design and ANOVA of Experiments
daewrDesign and Analysis of Experiments with R
daffDiff, Patch and Merge for Data.frames
dafsData analysis for forensic scientists
dagirliteSpatial Vector Data for Danmarks Administrative Geografiske Inddeling DAGI
dagittyGraphical Analysis of Structural Causal Models
dagRR Functions for Directed Acyclic Graphs
DAIMEEffects of Changing Deposition Rates
daiRInterface with Google Cloud Document AI API
DAISIEDynamical Assembly of Islands by Speciation, Immigration and Extinction
DAKSData Analysis and Knowledge Spaces
DALEXmoDel Agnostic Language for Exploration and eXplanation
DALEXtraExtension for 'DALEX' Package
dalmatianAutomating the Fitting of Double Linear Mixed Models in 'JAGS' and 'nimble'
DALYThe DALY Calculator - Graphical User Interface for Probabilistic DALY Calculation in R
damData Analysis Metabolomics
DamiaNNNeural Network Numerai
DAMiscDave Armstrong's Miscellaneous Functions
DAMOCLESDynamic Assembly Model of Colonization, Local Extinction and Speciation
dampackDecision-Analytic Modeling Package
damrInterface to Drosophila Activity Monitor System Result Files
damsDams in the United States from the National Inventory of Dams (NID)
DandEFADandelion Plot for R-Mode Exploratory Factor Analysis
dang'Dang' Associated New Goodies
daniDesign and Analysis of Non-Inferiority Trials
dannDiscriminant Adaptive Nearest Neighbor Classification
DAPDiscriminant Analysis via Projections
dapr'purrr'-Like Apply Functions Over Input Elements
daqapoData Quality Assessment for Process-Oriented Data
DArandDifferential Analysis with Random Reference Genes
DarkThe Analysis of Dark Adaptation Data
DarkDivEstimating Dark Diversity and Site-Specific Species Pools
darkskyTools to Work with the 'Dark Sky' 'API'
dartRImporting and Analysing SNP and Silicodart Data Generated by Genome-Wide Restriction Fragment Analysis
dartsStatistical Tools to Analyze Your Darts Game
dashAn Interface to the Dash Ecosystem for Authoring Reactive Web Applications
dashboardInteractive Data Visualization with D3.js
dashboardthemesCustomise the Appearance of 'shinydashboard' Applications using Themes
dashCoreComponentsCore Interactive UI Components for 'Dash'
dashHtmlComponentsVanilla HTML Components for 'Dash'
dashPivottableInteractive React-Based Pivot Tables for Dash
dashTableCore Interactive Table Component for 'dash'
DasstTools for Reading, Processing and Writing 'DSSAT' Files
datTools for Data Manipulation
data.tableExtension of 'data.frame'
data.treeGeneral Purpose Hierarchical Data Structure
Data2LDFunctional Data Analysis with Linear Differential Equations
data360rWrapper for 'TCdata360' and 'Govdata360' API
DatabaseConnectorConnecting to Various Database Platforms
DatabaseConnectorJarsJAR Dependencies for the 'DatabaseConnector' Package
DatabionicSwarmSwarm Intelligence for Self-Organized Clustering
DataCleanData Cleaning
datacleanrInteractive and Reproducible Data Cleaning
DataCombineTools for Easily Combining and Cleaning Data Sets
dataCompareRCompare Two Data Frames and Summarise the Difference
datadigestCreate an Interactive Data Summary
datadogrR Client for 'Datadog' API
DataEditRAn Interactive Editor for Viewing, Entering, Filtering & Editing Data
DataExplorerAutomate Data Exploration and Treatment
DataFakeRGenerate Fake Data for Relational Databases
dataframeexplorerFamiliarity with Dataframes Before Data Manipulation
dataframes2xlsWrite Data Frames to Xls Files
datafsmEstimating Finite State Machine Models from Data
datagovindiaData.gov.in API Wrapper
DataGraphExport Data from R so 'DataGraph' can Read it
DataLoaderImport Multiple File Types
dataMaidA Suite of Checks for Identification of Potential Errors in a Data Frame as Part of the Data Screening Process
datamapA system for mapping foreign objects to R variables and environments
datamartUnified access to your data sources
dataMetaCreate and Append a Data Dictionary for an R Dataset
datamodsModules to Import and Manipulate Data in 'Shiny'
datanuggetCreate, Refine, and Cluster Data Nuggets
dataonderivativesEasily Source Publicly Available Data on Derivatives
dataoneR Interface to the DataONE REST API
datapackA Flexible Container to Transport and Manipulate Data and Associated Resources
datapackage.rData Package 'Frictionless Data'
DataPackageRConstruct Reproducible Analytic Data Sets as R Packages
datapastaR Tools for Data Copy-Pasta
dataprepEfficient and Flexible Data Preprocessing Tools
dataPreparationAutomated Data Preparation
dataquieRData Quality in Epidemiological Research
datardisData from the Doctor Who Series
dataReporterReproducible Data Screening Checks and Report of Possible Errors
dataresqcC3S Quality Control Tools for Historical Climate Data
dataRetrievalRetrieval Functions for USGS and EPA Hydrologic and Water Quality Data
datariumData Bank for Statistical Analysis and Visualization
datarobot'DataRobot' Predictive Modeling API
datasailrRow by Row Data Processing Tool, Using 'DataSailr' Script
datasauRusDatasets from the Datasaurus Dozen
dataseriesSwitzerland's Data Series in One Place
datasets.loadInterfaces for Loading Datasets
datasetsICRDatasets from the Book "An Introduction to Clustering with R"
DataSpaceRInterface to 'the CAVD DataSpace'
dataspiceCreate Lightweight Schema.org Descriptions of Data
DatAssimData Assimilation
datasteprAn Implementation of a SAS-Style Data Step
DatastreamDSWS2RProvides a Link Between the 'Refinitiv Datastream' System and R
datastructuresImplementation of Core Data Structures
dataverseClient for Dataverse 4+ Repositories
DataVisualizationsVisualizations of High-Dimensional Data
DataVizData Visualisation Using an HTML Page and 'D3.js'
datawizardEasy Data Wrangling
datazoom.amazoniaSimplify Access to Data from the Amazon Region
dateFunctions for Handling Dates
datefixRFix Really Messy Dates
daterangepickerCreate a Shiny Date-Range Input
datetimeNominal Dates, Times, and Durations
datetimeutilsUtilities for Dates and Times
dateutilsDate Utils
datoramarInterface to the 'Datorama' API
datosTraduce al Español Varios Conjuntos de Datos de Práctica
datplotPreparation of Object Dating Ranges for Density Plots (Aoristic Analysis)
datr'Dat' Protocol Interface
datrProfileColumn Profile for Tables and Datasets
dauphinCompact Standard for Australian Phone Numbers
daveFunctions for "Data Analysis in Vegetation Ecology"
DaviesThe Davies Quantile Function
dawaiDiscriminant Analysis with Additional Information
daymetrInterface to the 'Daymet' Web Services
daySupplyCalculating Days' Supply and Daily Dose of Prescriptions
dbartsDiscrete Bayesian Additive Regression Trees Sampler
dbcspDistance-Based Common Spatial Patterns
dbdDiscretised Beta Distribution
dbEmpLikeGOFGoodness-of-fit and two sample comparison tests using sample entropy
dbEmpLikeNormTest for joint assessment of normality
DBESTDetecting Breakpoints and Estimating Segments in Trend
DBfitA Double Bootstrap Method for Analyzing Linear Models with Autoregressive Errors
dbflobrRead and Write Files to SQLite Databases
dbglmGeneralised Linear Models by Subsampling and One-Step Polishing
DBGSAmethods of distance-based gene set functional enrichment analysis
dbhydroR'DBHYDRO' Hydrologic and Water Quality Data
DBIR Database Interface
DBItestTesting 'DBI' 'Backends'
dblcensCompute the NPMLE of distribution from doubly censored data
dBlockmodelingDeterministic Blockmodeling of Signed, One-Mode and Two-Mode Networks
dblrDiscrete Boosting Logistic Regression
dbMCConfidence Interval for Matrix Completion via De-Biased Estimator
dbmssDistance-Based Measures of Spatial Structures
dbnlearnDynamic Bayesian Network Structure Learning, Parameter Learning and Forecasting
dbnRDynamic Bayesian Network Learning and Inference
dbparser'DrugBank' Database XML Parser
dbplotSimplifies Plotting Data Inside Databases
dbplyrA 'dplyr' Back End for Databases
dbscanDensity Based Clustering of Applications with Noise (DBSCAN) and Related Algorithms
dbstatsDistance-Based Statistics
dbWebFormsProduce R Functions to Create HTML Forms Based on SQL Meta Data
dbxA Fast, Easy-to-Use Database Interface
dc3netInferring Condition-Specific Networks via Differential Network Inference
DCADynamic Correlation Analysis for High Dimensional Data
DCCADetrended Fluctuation and Detrended Cross-Correlation Analysis
DCchoiceAnalyzing Dichotomous Choice Contingent Valuation Data
dccmidasDCC Models with GARCH-MIDAS Specifications in the Univariate Step
dccvalidatorMetadata Validation for Data Coordinating Centers
DCDDifferential Community Detection in Paired Biological Networks
DCEMClustering Big Data using Expectation Maximization Star (EM*) Algorithm
DCEmgmtDCE Data Reshaping and Processing
DCEtoolCreate, Survey and Analyse Discrete Choice Experiments
DCGData Cloud Geometry (DCG): Using Random Walks to Find Community Structure in Social Network Analysis
DCGLDifferential Co-expression Analysis and Differential Regulation Analysis of Gene Expression Microarray Data
dcGORAnalysis of Ontologies and Protein Domain Annotations
DChaosChaotic Time Series Analysis
dChipIOMethods for Reading dChip Files
DCLClaims Reserving under the Double Chain Ladder Model
DCLEARDistance Based Cell Lineage Reconstruction
dcloneData Cloning and MCMC Tools for Maximum Likelihood Methods
dclustDivisive Hierarchical Clustering
DClusterFunctions for the Detection of Spatial Clusters of Diseases
DClustermModel-Based Detection of Disease Clusters
dcminfoInformation Matrix for Diagnostic Classification Models
dcmleHierarchical Models Made Easy with Data Cloning
dcmodifyModify Data Using Externally Defined Modification Rules
dcmodifydbModifying Rules on a DataBase
DCODEList Linear n-Peptide Constraints for Overlapping Protein Regions
dcortoolsProviding Fast and Flexible Functions for Distance Correlation Analysis
dcovA Fast Implementation of Distance Covariance
dCovTSDistance Covariance and Correlation for Time Series Analysis
DCPODynamic Comparative Public Opinion
DCSmoothNonparametric Regression and Bandwidth Selection for Spatial Models
dCURDimension Reduction with Dynamic CUR
dcurverUtility Functions for Davidian Curves
dcurvesDecision Curve Analysis for Model Evaluation
dcvConventional Cross-validation statistics for climate-growth model
ddalphaDepth-Based Classification and Calculation of Data Depth
DDDDiversity-Dependent Diversification
ddeSolve Delay Differential Equations
DDHFmVariance Stabilization by Data-Driven Haar-Fisz (for Microarrays)
ddiThe Data Defect Index for Samples that May not be IID
ddivData Driven I-v Feature Extraction
DDMDeath Registration Coverage Estimation
DDoutlierDistance & Density-Based Outlier Detection
ddpDesirable Dietary Pattern
ddpcaDiagonally Dominant Principal Component Analysis
ddpcrAnalysis and Visualization of Droplet Digital PCR in R and on the Web
DDPNADisease-Drived Differential Proteins Co-Expression Network Analysis
DDRTreeLearning Principal Graphs with DDRTree
ddstData Driven Smooth Tests
deadbandStatistical Deadband Algorithms Comparison
dealLearning Bayesian Networks with Mixed Variables
deamerDeconvolution density estimation with adaptive methods for a variable prone to measurement error
deaRConventional and Fuzzy Data Envelopment Analysis
debarA Post-Clustering Denoiser for COI-5P Barcode Data
deBInferBayesian Inference for Differential Equations
debugmeDebug R Packages
debugrDebug Tool to Watch Objects/Expressions While Running an R Script
DeCAFSDetecting Changes in Autocorrelated and Fluctuating Signals
DECIDEDEComposition of Indirect and Direct Effects
decidoBindings for 'Mapbox' Ear Cutting Triangulation Library
decisionStatistical Decision Analysis
decisionSupportQuantitative Support of Decision Making under Uncertainty
deckglAn R Interface to 'deck.gl'
declaredFunctions to Declare Missing Values
DeclareDesignDeclare and Diagnose Research Designs
decodeDifferential Co-Expression and Differential Expression Analysis
decoderDecode Coded Variables to Plain Text and the Other Way Around
decomposedPSFTime Series Prediction with PSF and Decomposition Methods (EMD and EEMD)
DecomposeREmpirical Mode Decomposition for Cyclostratigraphy
decomprGlobal Value Chain Decomposition
deconDeconvolution Estimation in Measurement Error Models
deconstructSigsIdentifies Signatures Present in a Tumor Sample
deconvolveREmpirical Bayes Estimation Strategies
decorRetrieve Code Decorations
DecorateRFit and Deploy DECORATE Trees
decoratorsExtend the Behaviour of a Function without Explicitly Modifying it
DeducerA Data Analysis GUI for R
DeducerPlugInExampleDeducer Plug-in Example
DeducerPlugInScalingReliability and factor analysis plugin
DeducerSpatialDeducer for spatial data analysis
DeducerSurvivalAdd Survival Dialogue to Deducer
DeducerTextDeducer GUI for Text Data
deducorrectDeductive Correction, Deductive Imputation, and Deterministic Correction
deductiveData Correction and Imputation Using Deductive Methods
dedupewiderDeduplication Across Multiple Columns
deepA Neural Networks Framework
deepboostDeep Boosting Ensemble Modeling
deepdepVisualise and Explore the Deep Dependencies of R Packages
deepdiveDeep Learning for General Purpose
deepgmmDeep Gaussian Mixture Models
deepgpSequential Design for Deep Gaussian Processes using MCMC
deeplrInterface to the 'DeepL' Translation API
deepMOUClustering of Short Texts by Mixture of Unigrams and Its Deep Extensions
deepnetdeep learning toolkit in R
deepNNDeep Learning
DEEPRDirichlet-multinomial Evolutionary Event Profile Randomization (DEEPR) test
deepredeffDeep Learning Prediction of Effectors
deepregressionFitting Deep Distributional Regression
deeptimePlotting Tools for Anyone Working in Deep Time
DEEVDDensity Estimation by Extreme Value Distributions
defaultChange the Default Arguments in R Functions
defineCreate FDA-Style Data and Program Definitions
deflateBRDeflate Nominal Brazilian Reais
deformulaIntegration of One-Dimensional Functions with Double Exponential Formulas
deGradInferParameter Inference for Systems of Differential Equation
degreenetModels for Skewed Count Distributions Relevant to Networks
degrossDensity Estimation from GROuped Summary Statistics
dejaVuMultiple Imputation for Recurrent Events
DelaporteStatistical Functions for the Delaporte Distribution
delayedA Framework for Parallelizing Dependent Tasks
DelayedEffect.DesignSample Size and Power Calculations using the APPLE and SEPPLE Methods
deldirDelaunay Triangulation and Dirichlet (Voronoi) Tessellation
DeLoreanEstimates Pseudotimes for Single Cell Expression Data
deltEstimation of Multivariate Densities Using Adaptive Partitions
DeltaMeasure of Agreement Between Two Raters
deltaPlotRIdentification of Dichotomous Differential Item Functioning (DIF) using Angoff's Delta Plot Method
deltarCalculation of Delta R Values
DELTDKernel Density Estimation using Lifetime Distributions
dematelDecision Making Trial and Evaluation Laboratory Technique in R
DemerelateFunctions to Calculate Relatedness on Diploid Genetic Data
demingDeming, Theil-Sen, Passing-Bablock and Total Least Squares Regression
DemoDecompDecompose Demographic Functions
demogRAnalysis of Age-Structured Demographic Models
DemografixeRExtrapolate Gender, Age and Nationality of a Name
demoGraphicProviding Demographic Table with the P-Value, Standardized Mean Difference Value
demographyForecasting Mortality, Fertility, Migration and Population Data
demoKdeKernel Density Estimation for Demonstration Purposes
demoShinyRuns a 'Shiny' App as Demo or Lists All Demo 'Shiny' Apps
DEMOVADEvelopment (of Multi-Linear QSPR/QSAR) MOdels VAlidated using Test Set
demuOptimal Design Emulators via Point Processes
dendextendExtending 'dendrogram' Functionality in R
dendRoAnalystA Tool for Processing and Analyzing Dendrometer Data
dendroextrasExtra Functions to Cut, Label and Colour Dendrogram Clusters
dendrometeRAnalyzing Dendrometer Data
DendroSyncA Set of Tools for Calculating Spatial Synchrony Between Tree-Ring Chronologies
dendroToolsLinear and Nonlinear Methods for Analyzing Daily and Monthly Dendroclimatological Data
DendSerDendrogram seriation: ordering for visualisation
dendsortModular Leaf Ordering Methods for Dendrogram Nodes
denoiSeqDifferential Expression Analysis Using a Bottom-Up Model
denoiseRRegularized Low Rank Matrix Estimation
denovolyzeRStatistical Analyses of De Novo Genetic Variants
denproVisualization of Multivariate Functions, Sets, and Data
denseFLMMFunctional Linear Mixed Models for Densely Sampled Data
densEstBayesDensity Estimation via Bayesian Inference Engines
densitrAnalysing Density Profiles from Resistance Drilling of Trees
Density.T.HoldOutDensity.T.HoldOut: Non-combinatorial T-estimation Hold-Out for density estimation
densityClustClustering by Fast Search and Find of Density Peaks
DensParcorrDens-Based Method for Partial Correlation Estimation in Large Scale Brain Networks
densratioDensity Ratio Estimation
denstripDensity Strips and Other Methods for Compactly Illustrating Distributions
denvaxSimple Dengue Test and Vaccinate Cost Thresholds
DEoptimGlobal Optimization by Differential Evolution
DEoptimRDifferential Evolution Optimization in Pure R
depcoeffDependency Coefficients
depend.truncationStatistical Methods for the Analysis of Dependently Truncated Data
depignerA Utility Package to Help you Deal with "Pignas"
DepLogoDependency Logo
depmixDependent Mixture Models
depmixS4Dependent Mixture Models - Hidden Markov Models of GLMs and Other Distributions in S4
DEPONS2RRead, Plot and Analyse Output from the DEPONS Model
depthNonparametric Depth Functions for Multivariate Analysis
depth.plotMultivariate Analogy of Quantiles
DepthProcStatistical Depth Functions for Multivariate Analysis
depthToolsDepth Tools Package
dequerStacks, Queues, and 'Deques' for R
DeRezende.FerreiraZero Coupon Yield Curve Modelling
DerivSymbolic Differentiation
derivmktsFunctions and R Code to Accompany Derivatives Markets
DESDiscrete Event Simulation
descManipulate DESCRIPTION Files
descomponerSeasonal Adjustment by Frequency Analysis
descrDescriptive Statistics
describedataMiscellaneous Descriptive Functions
DescribeDisplayAn Interface to the 'DescribeDisplay' 'GGobi' Plugin
describerDescribe Data in R Using Common Descriptive Statistics
DescriptiveStats.OBeuDescriptive Statistics 'OpenBudgets.eu'
DescriptiveWHDescriptive Statistics
descriptrGenerate Descriptive Statistics
DescrTab2Publication Quality Descriptive Statistics Tables
descstatTools for Descriptive Statistics
descstatsrDescriptive Univariate Statistics
desctableProduce Descriptive and Comparative Tables Easily
DescToolsTools for Descriptive Statistics
DescToolsAddInsInteractive Functions to be Used as Shortcuts in 'RStudio'
deseasonalizeOptimal deseasonalization for geophysical time series using AR fitting
DesignCTPBDesign Clinical Trials with Potential Biomarker Effect
designGGComputational tool for designing genetical genomics experiments
DesignLibraryLibrary of Research Designs
designmatchMatched Samples that are Balanced and Representative by Design
designrBalanced Factorial Designs
designsizeSample Size Calculation of Various Study Designs
desiRDesirability Functions for Ranking, Selecting, and Integrating Data
desirabilityFunction Optimization and Ranking via Desirability Functions
desireDesirability functions in R
deslaDesparsified Lasso
DESnowballBagging with Distance-based Regression for Differential Gene Expression Analyses
deSolveSolvers for Initial Value Problems of Differential Equations ('ODE', 'DAE', 'DDE')
desplotPlotting Field Plans for Agricultural Experiments
DETRepresentation of DET Curve with Confidence Intervals
detailsCreate Details HTML Tag for Markdown and Package Documentation
detectAnalyzing Wildlife Data with Detection Error
detectorDetect Data Containing Personally Identifiable Information
detectRChange Point Detection
detectRUNSDetect Runs of Homozygosity and Runs of Heterozygosity in Diploid Genomes
detectseparationDetect and Check for Separation and Infinite Maximum Likelihood Estimates
deTestSetTest Set for Differential Equations
DetLifeInsuranceLife Insurance Premium and Reserves Valuation
DetMCDImplementation of the DetMCD Algorithm (Robust and Deterministic Estimation of Location and Scatter)
detpackDensity Estimation and Random Number Generation with Distribution Element Trees
DetRSuite of Deterministic and Robust Algorithms for Linear Regression
detrendeRStart the detrendeR Graphical User Interface (GUI)
detrendrDetrend Images
deTSTissue-Specific Enrichment Analysis
DetSelA Computer Program to Detect Markers Responding to Selection
detzrcrCompare Detrital Zircon Suites
devEMFEMF Graphics Output Device
devFuncClear and Condense Argument Check for User-Defined Functions
devoidA Graphic Device that Does Nothing
Devore7Data sets from Devore's "Prob and Stat for Eng (7th ed)"
devRateQuantify the Relationship Between Development Rate and Temperature in Ectotherms
devtoolboxTools for the R Developer
devtoolsTools to Make Developing R Packages Easier
DevTreatRulesDevelop Treatment Rules with Observational Data
dexterData Management and Analysis of Tests
dexterguiA Graphical User Interface for Dexter
dexterMSTCML and Bayesian Calibration of Multistage Tests
DFADetrended Fluctuation Analysis
DFA.CANCORLinear Discriminant Function and Canonical Correlation Analysis
dfadjustDegrees of Freedom Adjustment for Robust Standard Errors
dfcombPhase I/II Adaptive Dose-Finding Design for Combination Studies
dfCompareCompare Two Dataframes and Return Adds, Changes, and Deletes
dfcrmDose-Finding by the Continual Reassessment Method
dfexploreExplore data.frames by plotting NA and classes of each variable
dfidxIndexed Data Frames
DFITDifferential Functioning of Items and Tests
dfmetaMeta-Analysis of Phase I Dose-Finding Early Clinical Trials
dfmtaPhase I/II Adaptive Dose-Finding Design for MTA
dfoliatRDetection and Analysis of Insect Defoliation Signals in Tree Rings
dfoptimDerivative-Free Optimization
DforestDecision Forest
dformulaData Manipulation using Formula
dfpedExtrapolation and Bridging of Adult Information in Early Phase Dose-Finding Paediatrics Studies
dfphase1Phase I Control Charts (with Emphasis on Distribution-Free Methods)
dfpkBayesian Dose-Finding Designs using Pharmacokinetics (PK) for Phase I Clinical Trials
dfrrDichotomized Functional Response Regression
dfvadDiewert and Fox's Method of Value Added Growth Decomposition
dgaCapture-Recapture Estimation using Bayesian Model Averaging
dGAselIDGenetic Algorithm with Incomplete Dominance for Feature Selection
DGCADifferential Gene Correlation Analysis
DGEobjDifferential Gene Expression (DGE) Analysis Results Data Object
DGEobj.utilsDifferential Gene Expression (DGE) Analysis Utility Toolkit
dglarsDifferential Geometric Least Angle Regression
dglmDouble Generalized Linear Models
DGLMExtPoisDouble Generalized Linear Models Extending Poisson Regression
DGMDynamic Graphical Models
dgofDiscrete Goodness-of-Fit Tests
dgumbelThe Gumbel Distribution Functions and Gradients
DHARMaResidual Diagnostics for Hierarchical (Multi-Level / Mixed) Regression Models
DHBinsHexmaps for NZ District Health Boards
dhgaDifferential Hub Gene Analysis
dhglmDouble Hierarchical Generalized Linear Models
dhhA Heavy-Headed Distribution
dhRegDynamic Harmonic Regression
DHS.ratesCalculates Demographic Indicators
dHSICIndependence Testing via Hilbert Schmidt Independence Criterion
diDeficit Index (DI)
diagisDiagnostic Plot and Multivariate Summary Statistics of Weighted Samples from Importance Sampling
diagmetaMeta-Analysis of Diagnostic Accuracy Studies with Several Cutpoints
diagonalsBlock Diagonal Extraction or Replacement
diagramFunctions for Visualising Simple Graphs (Networks), Plotting Flow Diagrams
DiagrammeRGraph/Network Visualization
DiagrammeRsvgExport DiagrammeR Graphviz Graphs as SVG
dialectRDoing Dialectometry in R
DiallelAnalysisRDiallel Analysis with R
dialrParse, Format, and Validate International Phone Numbers
dialrjarsRequired 'libphonenumber' jars for the 'dialr' Package
dialsTools for Creating Tuning Parameter Values
diapltBeads Summary Plot of Ranges
diathorCalculate Ecological Information and Diatom Based Indices
diceCalculate probabilities of various dice-rolling events
DiceDesignDesigns of Computer Experiments
DiceEvalConstruction and Evaluation of Metamodels
DiceKrigingKriging Methods for Computer Experiments
DiceOptimKriging-Based Optimization for Computer Experiments
diceRDiverse Cluster Ensemble in R
DiceViewMethods for Visualization of Computer Experiments Design and Surrogate
dichromatColor Schemes for Dichromats
dicionariosIBGEDictionaries for reading microdata surveys from IBGE
DICOMreadReading and Saving DICOM Image Files
DIconvexFinding Patterns of Monotonicity and Convexity in Data
DictR6 Based Key-Value Dictionary Implementation
dictionar6R6 Dictionary Interface
didTreatment Effects with Multiple Periods and Groups
did2sTwo-Stage Difference-in-Differences Following Gardner (2021)
DidacticBoostA Simple Implementation and Demonstration of Gradient Boosting
DiderotBibliographic Network Analysis
didimputationImputation Estimator from Borusyak, Jaravel, and Spiess (2021)
DIDmultiplegtEstimation in DID with Multiple Groups and Periods
didrooRFMCompute Recency Frequency Monetary Scores for your Customer Data
diefMetrics for Continuous Efficiency
dielectricDefines some physical constants and dielectric functions commonly used in optics, plasmonics
dietrDiet Estimated Trophic Levels
diezeitR Interface to the ZEIT ONLINE Content API
DIFboostDetection of Differential Item Functioning (DIF) in Rasch Models by Boosting Techniques
difconetDifferential Coexpressed Networks
diffcorFisher's z-Tests Concerning Difference of Correlations
DiffCorrAnalyzing and Visualizing Differential Correlation Networks in Biological Data
diffdeppropCalculates Confidence Intervals for two Dependent Proportions
diffdfDataframe Difference Tool
diffeeFast and Scalable Learning of Sparse Changes in High-Dimensional Gaussian Graphical Model Structure
diffEnrichGiven a List of Gene Symbols, Performs Differential Enrichment Analysis
diffeqrSolving Differential Equations (ODEs, SDEs, DDEs, DAEs)
diffeRMetrics of Difference for Comparing Pairs of Maps or Pairs of Variables
diffIRTDiffusion IRT Models for Response and Response Time Data
diffmatchpatchString Diff, Match, and Patch Utilities
diffMeshGPMulti-Fidelity Computer Experiments Using the Tuo-Wu-Yu Model
DiffNetDetection of Statistically Significant Changes in Complex Biological Networks
diffobjDiffs for R Objects
diffprivEasy Differential Privacy
diffrDisplay Differences Between Two Files using Codediff Library
diffusionForecast the Diffusion of New Products
diffusionMapDiffusion Map
DiffusionRgqdInference and Analysis for Generalized Quadratic Diffusions
DiffusionRimpInference and Analysis for Diffusion Processes via Data Imputation and Method of Lines
DiffusionRjgqdInference and Analysis for Jump Generalized Quadratic Diffusions
diffusrNetwork Diffusion Algorithms
diffviewerHTML Widget to Show File Differences
DiffXTablesPattern Analysis Across Contingency Tables
DIFlassoA Penalty Approach to Differential Item Functioning in Rasch Models
difNLRDIF and DDF Detection by Non-Linear Regression Models
DIFplusMultilevel Mantel-Haenszel Statistics for Differential Item Functioning Detection
difRCollection of Methods to Detect Dichotomous Differential Item Functioning (DIF)
DIFshinyDifferential Item Functioning via Shiny Application
DIFtreeItem Focussed Trees for the Identification of Items in Differential Item Functioning
digestCreate Compact Hash Digests of R Objects
digitalDLSorteRDeconvolution of Bulk RNA-Seq Data Based on Deep Learning
digitalPCREstimate Copy Number for Digital PCR
digitizeUse Data from Published Plots in R
digitTestsTests for Detecting Irregular Digit Patterns
DIGSSDetermination of Intervals Using Georeferenced Survey Simulation
dilsData-Informed Link Strength. Combine multiple-relationship networks into a single weighted network. Impute (fill-in) missing network links
DIMEDIME (Differential Identification using Mixture Ensemble)
dimensioMultivariate Data Analysis
dimensionsRGathering Bibliographic Records from 'Digital Science Dimensions' Using 'DSL' API
DImodelsDiversity-Interactions (DI) Models
DIMORADiffusion Models R Analysis
dimRedA Framework for Dimensionality Reduction
dinaBayesian Estimation of DINA Model
dinamicDiNAMIC A Method To Analyze Recurrent DNA Copy Number Aberrations in Tumors
DiNAMIC.DuoFinding Recurrent DNA Copy Number Alterations and Differences
dineqDecomposition of (Income) Inequality
dineRDifferential Network Estimation in R
dintA Toolkit for Year-Quarter, Year-Month and Year-Isoweek Dates
DiPALMDifferential Pattern Analysis via Linear Modeling
DiPhiSeqRobust Tests for Differential Dispersion and Differential Expression in RNA-Sequencing Data
dipmDepth Importance in Precision Medicine (DIPM) Method
dipropermConduct Direction-Projection-Permutation Tests and Display Plots
DiPsDirectional Penalties for Optimal Matching in Observational Studies
dipsausA Dipping Sauce for Data Analysis and Visualizations
diptestHartigan's Dip Test Statistic for Unimodality - Corrected
dipwDebiased Inverse Propensity Score Weighting
DireLinear Regressions with a Latent Outcome Variable
DIRECTBayesian Clustering of Multivariate Data Under the Dirichlet-Process Prior
DirectedClusteringDirected Weighted Clustering Coefficient
DirectEffectsEstimating Controlled Direct Effects for Explaining Causal Findings
DirectionalA Collection of Functions for Directional Data Analysis
directlabelsDirect Labels for Multicolor Plots
directotreeCreates an Interactive Tree Structure of a Directory
directPADirection Analysis for Pathways and Kinases
DirectStandardisationAdjusted Means and Proportions by Direct Standardisation
dirichletprocessBuild Dirichlet Process Objects for Bayesian Modelling
DirichletRegDirichlet Regression
dirmcmcDirectional Metropolis Hastings Algorithm
dirmultEstimation in Dirichlet-Multinomial distribution
DirStatsNonparametric Methods for Directional Data
disaggRTwo-Steps Benchmarks for Time Series Disaggregation
disaggregationDisaggregation Modelling
disastr.apiWrapper for the UN OCHA ReliefWeb Disaster Events API
discAUCLinear and Non-Linear AUC for Discounting Data
DIscBIOA User-Friendly Pipeline for Biomarker Discovery in Single-Cell Transcriptomics
discfrailCox Models for Time-to-Event Data with Nonparametric Discrete Group-Specific Frailties
discgolfDiscourse API Client
dischargeFourier Analysis of Discharge Data
disclapDiscrete Laplace Exponential Family
disclapmixDiscrete Laplace Mixture Inference using the EM Algorithm
discnormTest for Discretized Normality in Ordinal Data
discoDiscordance and Concordance of Transcriptomic Responses
discordFunctions for Discordant Kinship Modeling
discourseGTAnalyze Group Patterns using Graph Theory in Educational Settings
discoveRExploratory Data Analysis System
discoverableresearchChecks Title, Abstract and Keywords to Optimise Discoverability
discretecdAlgorithmCoordinate-Descent Algorithm for Learning Sparse Discrete Bayesian Networks
DiscreteFDRMultiple Testing Procedures with Adaptation for Discrete Tests
discretefitSimulated Goodness-of-Fit Tests for Discrete Distributions
DiscreteInverseWeibullDiscrete Inverse Weibull Distribution
DiscreteLaplaceDiscrete Laplace Distributions
discreteMTPMultiple testing procedures for discrete test statistics
DiscreteQvalueImproved q-Values for Discrete Uniform and Homogeneous Tests
discreteRVCreate and Manipulate Discrete Random Variables
DiscreteWeibullDiscrete Weibull Distributions (Type 1 and 3)
discretizationData preprocessing, discretization for classification
discrimModel Wrappers for Discriminant Analysis
DiscriMinerTools of the Trade for Discriminant Analysis
discSurvDiscrete Time Survival Analysis
disdatData for Comparing Species Distribution Modeling Methods
diseasemappingModelling Spatial Variation in Disease Risk for Areal Data
diseqEstimation Methods for Markets in Equilibrium and Disequilibrium
DisequilibriumDisequilibrium Models
DisHetEstimate the Gene Expression Levels and Component Proportions of the Normal, Stroma (Immune) and Tumor Components of Bulk Tumor Samples
DisimForMixedCalculate Dissimilarity Matrix for Dataset with Mixed Attributes
DisImpactCalculates Disproportionate Impact When Binary Success Data are Disaggregated by Subgroups
disk.frameLarger-than-RAM Disk-Based Data Manipulation Framework
diskImageRA Pipeline to Analyze Resistance and Tolerance from Drug Disk Diffusion Assays
dismoSpecies Distribution Modeling
disordRNon-Ordered Vectors
disparityfilterDisparity Filter Algorithm for Weighted Networks
dispmodModelling Dispersion in GLM
disposablesCreate Disposable R Packages for Testing
dispositionEffectAnalysis of Disposition Effect on Financial Portfolios
dispRityMeasuring Disparity
disproseDiscriminating Probes Selection
dissCqNMultiple Assemblage Dissimilarity for Orders q = 0-N
disseverSpatial Downscaling using the Dissever Algorithm
DiSSModFitting Sample Selection Models for Discrete Response Variables
dissUtilsUtilities for making pairwise comparisons of multivariate data
DistanceDistance Sampling Detection Function and Abundance Estimation
distance.sample.sizeCalculates Study Size Required for Distance Sampling
distancesTools for Distance Metrics
distancetoCalculate Distance to Features
distantiaAssessing Dissimilarity Between Multivariate Time Series
DistatisRDiSTATIS Three Way Metric Multidimensional Scaling
distcompComputations over Distributed Data without Aggregation
distcreteDiscrete Distribution Approximations
distdichoRDistributional Method for the Dichotomisation of Continuous Outcomes
distfree.crDistribution-Free Confidence Region
distill'R Markdown' Format for Scientific and Technical Writing
distilleryMethod Functions for Confidence Intervals and to Distill Information from an Object
distoUnified Interface to Distance, Dissimilarity, Similarity Matrices
distoryDistance Between Phylogenetic Histories
distrObject Oriented Implementation of Distributions
distr6The Complete R6 Probability Distributions Interface
distrDocDocumentation for 'distr' Family of R Packages
distreg.visFramework for the Visualization of Distributional Regression Models
distrEllipseS4 Classes for Elliptically Contoured Distributions
distrExExtensions of Package 'distr'
DISTRIBFour Essential Functions for Statistical Distributions Analysis: A New Functional Approach
distribglmDistributed Generalized Linear Models
distributionalVectorised Probability Distributions
DistributionFitRFitting Multiple Parametric Distributions
DistributionOptimizationDistribution Optimization
distributions3Probability Distributions as S3 Objects
distributionsrdDistribution Fitting and Evaluation
DistributionTestPowerful Goodness-of-Fit Tests Based on the Likelihood Ratio
DistributionUtilsDistribution Utilities
distrModObject Oriented Implementation of Probability Models
distroLinux Distribution Properties
distromDistributed Multinomial Regression
distrrEstimate and Manage Empirical Distributions
distrRmetricsDistribution Classes for Distributions from Rmetrics
distrSimSimulation Classes Based on Package 'distr'
distrTeachExtensions of Package 'distr' for Teaching Stochastics/Statistics in Secondary School
distrTEstEstimation and Testing Classes Based on Package 'distr'
distTailsA Collection of Full Defined Distribution Tails
disttoolsDistance Object Manipulation Tools
dittodbA Test Environment for Database Requests
divReport on Diversity and Inclusion in a Corporate Setting
divDynDiversity Dynamics using Fossil Sampling Data
DivEDiversity Estimator
diveMoveDive Analysis and Calibration
diveREasily Install and Load Interactive Data Visualization Tools
divergeEvolutionary Trait Divergence Between Sister Species and Other Paired Lineages
diverseDiversity Measures for Complex Systems
DiversificationREconometric Tools to Measure Portfolio Diversification
diversitreeComparative 'Phylogenetic' Analyses of Diversification
diveRsityA Comprehensive, General Purpose Population Genetics Analysis Package
diversityForestComplex Split Procedures in Random Forests Through Candidate Split Sampling
DiversityOccupancyBuilding Diversity Models from Multiple Species Occupancy Models
divestGet Images Out of DICOM Format Quickly
divoTools for Analysis of Diversity and Similarity in Biological Systems
divsegCalculate Diversity and Segregation Indices
dixonNearest Neighbour Contingency Table Analysis
dixonTestDixon's Ratio Test for Outlier Detection
diyarRecord Linkage and Epidemiological Case Definitions in R
DIZutilsUtilities for 'DIZ' R Package Development
DJLDistance Measure Based Judgment and Learning
dkanrClient for the 'DKAN' API
dkDNADiffusion Kernels on a Set of Genotypes
dLagMTime Series Regression Models with Distributed Lag Models
DLASSOImplementation of Adaptive or Non-Adaptive Differentiable Lasso and SCAD Penalties in Linear Models
dlbayesUse Dirichlet Laplace Prior to Solve Linear Regression Problem and Do Variable Selection
dlibAllow Access to the 'Dlib' C++ Library
dlmBayesian and Likelihood Analysis of Dynamic Linear Models
DLMtoolData-Limited Methods Toolkit
dlnmDistributed Lag Non-Linear Models
dlookrTools for Data Diagnosis, Exploration, Transformation
dlrDownload and Cache Files Safely
dlsemDistributed-Lag Linear Structural Equation Models
dlstatsDownload Stats of R Packages
dmRelational Data Models
dmaDynamic Model Averaging
dmacsMeasurement Nonequivalence Effect Size Calculator
dmaiDivisia Monetary Aggregates Index
dmbcModel Based Clustering of Binary Dissimilarity Measurements
DMCfunDiffusion Model of Conflict (DMC) in Reaction Time Tasks
dmlDistance Metric Learning in R
dmlalgDouble Machine Learning Algorithms
DMLLZUDouble Machine Learning
dmmDyadic Mixed Model for Pedigree Data
DMMFDaily Based Morgan-Morgan-Finney (DMMF) Soil Erosion Model
dModDynamic Modeling and Parameter Estimation in ODE Models
dmri.trackingDiST - Diffusion Direction Smoothing and Tracking
DMRMarkDMR Detection by Non-Homogeneous Hidden Markov Model from Methylation Array Data
DMRnetDelete or Merge Regressors Algorithms for Linear and Logistic Model Selection and High-Dimensional Data
dmtDependency Modeling Toolkit
DMtestDifferential Methylation Tests (DMtest)
DMTLTools for Applying Distribution Mapping Based Transfer Learning
dmtoolsTools for Clinical Data Management
dmutateMutate Data Frames with Random Variates
DMwR2Functions and Data for the Second Edition of "Data Mining with R"
dnaDifferential Network Analysis
DNAseqtestGenerating and Testing DNA Sequences
DNAtoolsTools for Analysing Forensic Genetic DNA Data
DnEDistribution and Equation
dnetIntegrative Analysis of Omics Data in Terms of Network, Evolution and Ontology
dngDistributions and Gradients
DNLCDifferential Network Local Consistency Analysis
DNMFDiscriminant Non-Negative Matrix Factorization
dnrSimulate Dynamic Networks using Exponential Random Graph Models (ERGM) Family
doData Operator
DOBADAnalysis of Discretely Observed Linear Birth-and-Death(-and-Immigration) Markov Chains
dobinDimension Reduction for Outlier Detection
dobsonData from the GLM Book by Dobson and Barnett
doByGroupwise Statistics, LSmeans, Linear Contrasts, Utilities
doc2concreteMeasuring Concreteness in Natural Language
doc2vecDistributed Representations of Sentences, Documents and Topics
dockerfilerEasy Dockerfile Creation from R
DockerParallelUsing the Docker Container to Create R Workers on Local or Cloud Platform
docknitrUse Docker Images to Process Rmarkdown Blocks
doconvDocument Conversion to 'PDF' or 'PNG'
docoptCommand-Line Interface Specification Language
docopulaeOptimal Designs for Copula Models
docreviewOpinionated Documentation Checking
docstringProvides Docstring Capabilities to R Functions
documairAutomatic Documentation for R packages
documentRun 'roxygen2' on (Chunks of) Single Code Files
documenterDocuments Files
docuSignrConnect to 'DocuSign' API
docxtoolsTools for R Markdown to Docx Documents
docxtractrExtract Data Tables and Comments from 'Microsoft' 'Word' Documents
DodgeAcceptance Sampling Ideas Originated by H.F. Dodge
dodgrDistances on Directed Graphs
DoE.baseFull Factorials, Orthogonal Arrays and Base Utilities for DoE Packages
DoE.MIParrayCreation of Arrays by Mixed Integer Programming
DoE.multi.responseConstruct Multi-Response Experimental Designs
DoE.wrapperWrapper Package for Design of Experiments Functionality
doebioresearchAnalysis of Design of Experiments for Biological Research
DoEstRareRare Variant Association Test Based on Position Density Estimation
doexThe One-Way Heteroscedastic ANOVA Tests
doFutureA Universal Foreach Parallel Adapter using the Future API of the 'future' Package
doMCForeach Parallel Adaptor for 'parallel'
DominanceCalculate and Visualize Dominance Hierarchies
dominanceanalysisDominance Analysis
dominoR Console Bindings for the 'Domino Command-Line Client'
DominoDataCaptureDomino Data Capture
domirTools to Support Relative Importance Analysis
doMIsaulDo Multiple Imputation-Based Semi-Supervised and Unsupervised Learning
doMPIForeach Parallel Adaptor for the Rmpi Package
donutNearest Neighbour Search with Variables on a Torus
doolkitExploration of Dental Surface Topography
doParallelForeach Parallel Adaptor for the 'parallel' Package
DOPEDrug Ontology Parsing Engine
doRedis'Foreach' Parallel Adapter Using the 'Redis' Database
doremiDynamics of Return to Equilibrium During Multiple Inputs
doRNGGeneric Reproducible Parallel Backend for 'foreach' Loops
DOSDesign of Observational Studies
DOS2Design of Observational Studies, Companion to the Second Edition
dosearchCausal Effect Identification from Multiple Incomplete Data Sources
dosedesignRInteractive Designing of Dose Finding Studies
DoseFindingPlanning and Analyzing Dose Finding Experiments
doseminerExtract Drug Dosages from Free-Text Prescriptions
doSNOWForeach Parallel Adaptor for the 'snow' Package
DOSPortfolioDynamic Optimal Shrinkage Portfolio
dosresmetaMultivariate Dose-Response Meta-Analysis
dostatsCompute Statistics Helper Functions
DOTRender and Export DOT Graphs in R
DoTCDistribution of Typicality Coefficients
dotCall64Enhanced Foreign Function Interface Supporting Long Vectors
dotdotEnhanced Assignment Operator to Overwrite or Grow Objects
dotenvLoad Environment Variables from '.env'
dotgenGene-Set Analysis via Decorrelation by Orthogonal Transformation
dotprofileCreate and Manage Configuration Profiles
dotwhiskerDot-and-Whisker Plots of Regression Results
doubcensSurvivor Function Estimation for Doubly Interval-Censored Failure Time Data
double.truncationAnalysis of Doubly-Truncated Data
DoubleConeTest Against Parametric Regression Function
DoubleExpSeqDifferential Exon Usage Test for RNA-Seq Data via Empirical Bayes Shrinkage of the Dispersion Parameter
DoubleMLDouble Machine Learning in R
doubtEnable Operators Containing the '?' Symbol
DOvalidationKernel Hazard Estimation with Best One-Sided and Double One-Sided Cross-Validation
DOVEDurability of Vaccine Efficacy
DowdFunctions Ported from 'MMR2' Toolbox Offered in Kevin Dowd's Book Measuring Market Risk
downlitSyntax Highlighting and Automatic Linking
downloaderDownload Files over HTTP and HTTPS
downloadthisImplement Download Buttons in 'rmarkdown'
downscaleDownscaling Species Occupancy
downscaledlDownscale of RS Images using Deep Learning
downsizeA Tool to Downsize Large Workflows for Testing
dowserB Cell Receptor Phylogenetics Toolkit
dparserPort of 'Dparser' Package
DPBBMDirichlet Process Beta-Binomial Mixture
dpccDynamic Programming for Convex Clustering
dpcidDifferential Partial Correlation IDentification
dPCPAutomated Analysis of Multiplex Digital PCR Data
DpitDistribution Pitting
dplRDendrochronology Program Library in R
dplRConConcordance for Dendroclimatology
dplyrA Grammar of Data Manipulation
dplyr.teradataA 'Teradata' Backend for 'dplyr'
dplyrAssistRStudio Addin for Teaching and Learning Data Manipulation Using 'dplyr'
dpmrData Package Manager for R
DPPInference of Parameters of Normal Distributions from a Mixture of Normals
dppmixDeterminantal Point Process Mixture Models
DPQDensity, Probability, Quantile ('DPQ') Computations
DPQmpfrDPQ (Density, Probability, Quantile) Distribution Computations using MPFR
dprintPrint Tabular Data to Graphics Device
dpsegPiecewise Linear Segmentation by Dynamic Programming
DPtreeDirichlet-Based Polya Tree
DPWeibullDirichlet Process Weibull Mixture Model for Survival Data
dqrngFast Pseudo Random Number Generators
drMethods for Dimension Reduction for Regression
DR.SCJoint Dimension Reduction and Spatial Clustering
dr4plDose Response Data Analysis using the 4 Parameter Logistic (4pl) Model
dracorDecode Draco Format 3D Mesh Data
dragonDeep Time Redox Analysis of the Geobiology Ontology Network
dragonkingStatistical Tools to Identify Dragon Kings
dragracerData Sets for RuPaul's Drag Race
dragulaRDrag and Drop Elements in 'Shiny' using 'Dragula Javascript Library'
drakeA Pipeline Toolkit for Reproducible Computation at Scale
DramaAnalysisAnalysis of Dramatic Texts
drat'Drat' R Archive Template
drawWrapper Functions for Producing Graphics
drawerAn Interactive HTML Image Editing Tool
DRaWRDiscriminative Random Walk with Restart
drawsampleDraw Samples with the Desired Properties from a Data Set
DRAYLComputation of Rayleigh Densities of Arbitrary Dimension
DrBatsData Representation: Bayesian Approach That's Sparse
drcAnalysis of Dose-Response Curves
drdaDose-Response Data Analysis
DRDIDDoubly Robust Difference-in-Differences Estimators
DRDRtestA Nonparametric Doubly Robust Test for Continuous Treatment Effect
dreamerDose Response Models for Bayesian Model Averaging
dreamerrError Handling Made Easy
DREGARRegularized Estimation of Dynamic Linear Regression in the Presence of Autocorrelated Residuals (DREGAR)
drfDistributional Random Forests
drfitDose-Response Data Evaluation
drgeeDoubly Robust Generalized Estimating Equations
DRHotNetDifferential Risk Hotspots in a Linear Network
drhurLearning R with Dr. Hu
DriftBurstHypothesisCalculates the Test-Statistic for the Drift Burst Hypothesis
drifterConcept Drift and Concept Shift Detection for Predictive Models
DrillRR Driver for Apache Drill
drimmREstimation, Simulation and Reliability of Drifting Markov Models
DrImputeImputing Dropout Events in Single-Cell RNA-Sequencing Data
DrInsightDrug Repurposing: Integration and Systematic Investigation of Genomic High Throughput Data
DRIPDiscontinuous Regression and Image Processing
DriveMLSelf-Drive Machine Learning Projects
driveRPrioritizing Cancer Driver Genes Using Genomics Data
drmdelDual Empirical Likelihood Inference under Density Ratio Models in the Presence of Multiple Samples
drollAnalyze Roll Distributions
DRomicsDose Response for Omics
dropRAnalyze Drop Out of an Experiment or Survey
droptestSimulates LOX Drop Testing
drordDoubly-Robust Estimators for Ordinal Outcomes
droughtStatistical Modeling and Assessment of Drought
drpopEfficient and Doubly Robust Population Size Estimation
DRRDimensionality Reduction via Regression
drtmleDoubly-Robust Nonparametric Estimation and Inference
DrugClustImplementation of a Machine Learning Framework for Predicting Drugs Side Effects
drugpreprPrepare Electronic Prescription Record Data to Estimate Drug Exposure
drumrTurn R into a Drum Machine
dsDescriptive Statistics
ds4psyData Science for Psychologists
dsaSeasonal Adjustment of Daily Time Series
DSAIDEDynamical Systems Approach to Infectious Disease Epidemiology (Ecology/Evolution)
DSAIRMDynamical Systems Approach to Immune Response Modeling
dsampleDiscretization-Based Direct Random Sample Generation
dsbNormalize & Denoise Droplet Single Cell Protein Data (CITE-Seq)
DSBayesBayesian subgroup analysis in clinical trials
dscoreD-Score for Child Development
dseDynamic Systems Estimation (Time Series Package)
DSI'DataSHIELD' Interface
dsimsDistance Sampling Simulations
DSjobtrackerWhat Skills and Qualifications are Required for Data Science Related Jobs?
DSLDistributed Storage and List
dslabsData Science Labs
dsliceDynamic Slicing
DSLite'DataSHIELD' Implementation on Local Datasets
dsmDensity Surface Modelling of Distance Sampling Data
dsmiscData Science Box of Pandora Miscellaneous
DSMolgenisArmadillo'DataSHIELD' Client for 'MOLGENIS Armadillo'
DSOpal'DataSHIELD' Implementation for 'Opal'
DSpotyGet 'Spotify' API Multiple Information
dsrTestTests and Confidence Intervals on Directly Standardized Rates for Several Methods
DSSATA Comprehensive R Interface for the DSSAT Cropping Systems Model
dssdDistance Sampling Survey Design
DSsimDistance Sampling Simulations
dstUsing the Theory of Belief Functions
DstarMAnalyze Two Choice Reaction Time Data with the D*M Method
dstatConditional Sensitivity Analysis for Matched Observational Studies
DStreeRecursive Partitioning for Discrete-Time Survival Trees
dSVADirect Surrogate Variable Analysis
DSviaDRMExploring Disease Similarity in Terms of Dysfunctional Regulatory Mechanisms
DSWEData Science for Wind Energy
DTA Wrapper of the JavaScript Library 'DataTables'
dtangleCell Type Deconvolution from Gene Expressions
DTAplotsCreates Plots Accompanying Bayesian Diagnostic Test Accuracy Meta-Analyses
DTATDose Titration Algorithm Tuning
DTAXGDiagnostic Test Assessment in the Absence of Gold Standard
DTComPairComparison of Binary Diagnostic Tests in a Paired Study Design
DtDDistance to Default
DTDADoubly Truncated Data Analysis
DTDA.cifDoubly Truncated Data Analysis, Cumulative Incidence Functions
DTDA.niDoubly Truncated Data Analysis, Non Iterative
dtiAnalysis of Diffusion Weighted Imaging (DWI) Data
DTKDunnett-Tukey-Kramer Pairwise Multiple Comparison Test Adjusted for Unequal Variances and Unequal Sample Sizes
DTMCPackSuite of functions related to discrete-time discrete-state Markov Chains
dtpDynamic Panel Threshold Model
dtpcrmDose Transition Pathways for Continual Reassessment Method
dtplyrData Table Back-End for 'dplyr'
DTREstimation and Comparison of Dynamic Treatment Regimes
dtreeDecision Trees
DTRlearn2Statistical Learning Methods for Optimizing Dynamic Treatment Regimes
DTRregDTR Estimation and Inference via G-Estimation, Dynamic WOLS, Q-Learning, and Dynamic Weighted Survival Modeling (DWSurv)
dtrSurvDynamic Treatment Regimes for Survival Analysis
DTSgA Class for Working with Time Series Data Based on 'data.table' and 'R6' with Largely Optional Reference Semantics
dttDiscrete Trigonometric Transforms
dttr2Manipulate Date, POSIXct and hms Vectors
dtwDynamic Time Warping Algorithms
DTWBIImputation of Time Series Based on Dynamic Time Warping
dtwclustTime Series Clustering Along with Optimizations for the Dynamic Time Warping Distance
DTwrappersSimplified Data Analysis with Wrapper Functions for the 'Data.Table' Package
dtwSatTime-Weighted Dynamic Time Warping for Satellite Image Time Series Analysis
DTWUMIImputation of Multivariate Time Series Based on Dynamic Time Warping
dualAutomatic Differentiation with Dual Numbers
dualtreesDecimated and Undecimated 2D Complex Dual-Tree Wavelet Transform
duawranglrSecurely Wrangle Dataset According to Data Usage Agreement
dubUnpacking Assignment for Lists via Pattern Matching
DUBStepRCorrelation-Based Feature Selection for Single-Cell RNA Sequencing Data
duckdbDBI Package for the DuckDB Database Management System
duckduckrSimple Client for the DuckDuckGo Instant Answer API
dumbbellDisplaying Changes Between Two Points Using Dumbbell Plots
dummiesCreate dummy/indicator variables flexibly and efficiently
dummyAutomatic Creation of Dummies with Support for Predictive Modeling
dundermifflinThe Office Quotes on-Demand
dunn.testDunn's Test of Multiple Comparisons Using Rank Sums
DunnettTestsSoftware implementation of step-down and step-up Dunnett test procedures
dupiRBayesian inference from count data using discrete uniform priors
dupreeIdentify Duplicated R Code in a Project
durmodMixed Proportional Hazard Competing Risk Model
DVHmetricsAnalyze Dose-Volume Histograms and Check Constraints
dvirDisaster Victim Identification
dvmiscConvenience Functions, Moving Window Statistics, and Graphics
dvqccDynamic VAR - Based Control Charts for Batch Process Monitoring
DWBmodelUNDynamic Water Balance a Hydrological Model
DWDLargeRFast Algorithms for Large Scale Generalized Distance Weighted Discrimination
dwdradarRead Binary Radar Files from 'DWD' (German Weather Service)
DWLassoDegree Weighted Lasso
dwlmDoubly Weighted Linear Model
DWregParametric Regression for Discrete Response
dyadsDyadic Network Analysis
dycdtoolsTools for DYRESM-CAEDYM Model Development: Calibration Assistant and Post-Processing
dydeaDetection of Chaotic and Regular Intervals in the Data
dygraphsInterface to 'Dygraphs' Interactive Time Series Charting Library
DykstraQuadratic Programming using Cyclic Projections
DYMDid You Mean?
dynTime Series Regression
dynamacDynamic Simulation and Testing for Single-Equation ARDL Models
DynamicDistributionDynamically visualized probability distributions and their moments
DynamicGPModelling and Analysis of Dynamic Computer Experiments
dynamichazardDynamic Hazard Models using State Space Models
dynamicTreeCutMethods for Detection of Clusters in Hierarchical Clustering Dendrograms
DynaRankRInferring Longitudinal Dominance Hierarchies
DynareRA Seamless Integration of 'R' and 'Dynare'
dynaSpecDynamic Spectrogram Visualizations
dynaTreeDynamic Trees for Learning and Design
dynBiplotGUIFull Interactive GUI for Dynamic Biplot in R
DynClustDenoising and clustering for dynamical image sequence (2D or 3D)+T
DynCommDynamic Network Communities Detection and Generation
dyncompComplexity of Short and Coarse-Grained Time Series
dynCorrDynamic Correlation Package
dyndimredDimensionality Reduction Methods in a Common Format
dynetNLAResistanceResisting Neighbor Label Attack in a Dynamic Network
dynfeatureFeature Importance for Dynamic Processes
dyngenA Multi-Modal Simulator for Spearheading Single-Cell Omics Analyses
dyniaFit Dynamic Intervention Model
dynlmDynamic Linear Regression
dynmixEstimation of Dynamic Finite Mixtures
DynNomVisualising Statistical Models using Dynamic Nomograms
dynpanelDynamic Panel Data Models
dynparamCreating Meta-Information for Parameters
dynplotVisualising Single-Cell Trajectories
dynpredCompanion Package to "Dynamic Prediction in Clinical Survival Analysis"
dynprogDynamic Programming Domain-Specific Language
dynrDynamic Models with Regime-Switching
dynRBDynamic Range Boxes
dynsbmDynamic Stochastic Block Models
dynsimDynamic Simulations of Autoregressive Relationships
dynsurvDynamic Models for Survival Data
DynTxRegimeMethods for Estimating Optimal Dynamic Treatment Regimes
dynutilsCommon Functionality for the 'dynverse' Packages
dynwrapRepresenting and Inferring Single-Cell Trajectories
DySeqFunctions for Dyadic Sequence Analyses
DysPIADysregulated Pathway Identification Analysis
DysPIADataBackground and Pathway Data Used in 'DysPIA'
e1071Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien
E4toolsManagement and Processing Tools for Data Produced by the Empatica E4
eadrmFitting Dose-Response Models Using an Evolutionary Algorithm
eafPlots of the Empirical Attainment Function
EagleMultiple Locus Association Mapping on a Genome-Wide Scale
EAinferenceEstimator Augmentation and Simulation-Based Inference
eAnalyticsDynamic Web-Based Analytics for the Energy Industry
earlygatingProperties of Bayesian Early Gating Designs
earlyREstimation of Transmissibility in the Early Stages of a Disease Outbreak
earlywarningsEarly Warning Signals Toolbox for Detecting Critical Transitions in Timeseries
earthMultivariate Adaptive Regression Splines
earthtideParallel Implementation of 'ETERNA 3.40' for Prediction and Analysis of Earth Tides
earthtonesDerive a Color Palette from a Particular Location on Earth
EasyABCEfficient Approximate Bayesian Computation Sampling Schemes
easyAHPAnalytic Hierarchy Process (AHP)
easyalluvialGenerate Alluvial Plots with a Single Line of Code
easyanovaAnalysis of Variance and Other Important Complementary Analyses
easyCODACompositional Data Analysis in Practice
easycsvLoad Multiple 'csv' and 'txt' Tables
easyDesAn Easy Way to Descriptive Analysis
EasyDescribeA Convenient Way of Descriptive Statistics
easylabelInteractive Scatter Plot and Volcano Plot Labels
EasyMxEasy Model-Builder Functions for 'OpenMx'
easyNCDFTools to Easily Read/Write NetCDF Files into/from Multidimensional R Arrays
easynlsEasy Nonlinear Model
easypackagesEasy Loading and Installing of Packages
easypowerSample Size Estimation for Experimental Designs
easyPSIDReading, Formatting, and Organizing the Panel Study of Income Dynamics (PSID)
easyPubMedSearch and Retrieve Scientific Publication Records from PubMed
easyrHelpful Functions from Oliver Wyman Actuarial Consulting
easyregEasy Regression
easySdcTableEasy Interface to the Statistical Disclosure Control Package 'sdcTable' Extended with the 'GaussSuppression' Method
easySVGAn Easy SVG Basic Elements Generator
easyVerificationEnsemble Forecast Verification for Large Data Sets
eatEfficiency Analysis Trees
eatATACreate Constraints for Small Test Assembly Problems
eatDBSpreadsheet Interface for Relational Databases
eatGADSData Management of Large Hierarchical Data
eatRepEducational Assessment Tools for Replication Methods
eatToolsMiscellaneous Functions for the Analysis of Educational Assessments
ebaElimination-by-Aspects Models
ebalEntropy reweighting to create balanced samples
EBASSSample Size Calculation Method for Cost-Effectiveness Studies Based on Expected Value of Perfect Information
EbayesThreshEmpirical Bayes Thresholding and Related Methods
EBCHSAn Empirical Bayes Method for Chi-Squared Data
ebciRobust Empirical Bayes Confidence Intervals
ebdbNetEmpirical Bayes Estimation of Dynamic Bayesian Networks
EBENEmpirical Bayesian Elastic Net
ebGenotypingGenotyping and SNP Detection using Next Generation Sequencing Data
EBglmnetEmpirical Bayesian Lasso and Elastic Net Methods for Generalized Linear Models
ebirdstAccess and Analyze eBird Status and Trends Data
EBMAforecastEstimate Ensemble Bayesian Model Averaging Forecasts using Gibbs Sampling or EM-Algorithms
ebmstateEmpirical Bayes Multi-State Cox Model
EBPRSDerive Polygenic Risk Score Based on Emprical Bayes Theory
EBrankEmpirical Bayes Ranking
ebregImplementation of the Empirical Bayes Method
eBsc"Empirical Bayes Smoothing Splines with Correlated Errors"
ebSNPGenotyping and SNP calling using single-sample next generation sequencing data
ec50estimatorAn Automated Way to Estimate EC50 for Stratified Datasets
ecapExcess Certainty Adjusted Probability Estimate
eCAREigenvalue CAR Models
ecbProgrammatic Access to the European Central Bank's Statistical Data Warehouse
ecceTranslate English Words into Chinese, or Translate Chinese Words into English
ECctmcSimulation from Endpoint-Conditioned Continuous Time Markov Chains
ecdElliptic Lambda Distribution and Option Pricing Model
EcdatData Sets for Econometrics
ecdfHTEmpirical CDF for Heavy Tailed Data
ecespaFunctions for Spatial Point Pattern Analysis
EcfunFunctions for 'Ecdat'
ECGofTestDxA Goodness-of-Fit Test for Elliptical Distributions with Diagnostic Capabilities
echToolbox for ECH with R
ECharts2ShinyEmbedding Interactive Charts Generated with ECharts Library into Shiny Applications
echarts4rCreate Interactive Graphs with 'Echarts JavaScript' Version 5
echartyMinimal R/Shiny Interface to JavaScript Library 'ECharts'
echelonThe Echelon Analysis and the Detection of Spatial Clusters using Echelon Scan Method
eChemSimulations for Electrochemistry Experiments
echo.findFinding Rhythms Using Extended Circadian Harmonic Oscillators (ECHO)
echogramEchogram Visualisation and Analysis
echorAccess EPA 'ECHO' Data
ecipexEfficient Calculation of Fine Structure Isotope Patterns via Fourier Transforms of Simplex-Based Elemental Models
ECLRMCEnsemble Correlation-Based Low-Rank Matrix Completion
eclustEnvironment Based Clustering for Interpretable Predictive Models in High Dimensional Data
ecmBuild Error Correction Models
ecmwfrInterface to 'ECMWF' and 'CDS' Data Web Services
ecochangeIntegrating Ecosystem Remote Sensing Products to Derive EBV Indicators
ecocomDPTools to Create, Use, and Convert ecocomDP Data
ecoCopulaGraphical Modelling and Ordination using Copulas
EcoDietEstimating a Diet Matrix from Biotracer and Stomach Content Data
ecodistDissimilarity-Based Functions for Ecological Analysis
EcohydmodEcohydrological Modelling
EcoHydRologyA Community Modeling Foundation for Eco-Hydrology
EcoIndREcological Indicators
ECoLComplexity Measures for Supervised Problems
ecolMod"A practical guide to ecological modelling - using R as a simulation platform"
ecolotteryCoalescent-Based Simulation of Ecological Communities
ecolTestCommunity Ecology Tests
EconDemandGeneral Analysis of Various Economics Demand Systems
econetEstimation of Parameter-Dependent Network Centrality Measures
EcoNetGenSimulate and Sample from Ecological Interaction Networks
econetworkAnalyzing Ecological Networks
economiccomplexityComputational Methods for Economic Complexity
econullnetrNull Model Analysis for Ecological Networks
ecopowerPower Estimates and Equivalence Testing for Multivariate Data
ecoregEcological Regression using Aggregate and Individual Data
ecorestConducts Analyses Informing Ecosystem Restoration Decisions
ecosimToolbox for Aquatic Ecosystem Modeling
ECOSolveREmbedded Conic Solver in R
ecospaceSimulating Community Assembly and Ecological Diversification Using Ecospace Frameworks
ecospatSpatial Ecology Miscellaneous Methods
ecostatsCode and Data Accompanying the Eco-Stats Text
ecostatscaleStatistical Scaling Functions for Ecological Systems
EcotoneFinderCharacterising and Locating Ecotones and Communities
ecotoxAnalysis of Ecotoxicology
ecotoxicologyMethods for Ecotoxicology
ECOTOXrDownload and Extract Data from US EPA's ECOTOX Database
ecotrajEcological Trajectory Analysis
EcoTrophEcoTroph R package
ecovalProcedures for Ecological Assessment of Surface Waters
EcoVirtualSimulation of Ecological Models
ecpNon-Parametric Multiple Change-Point Analysis of Multivariate Data
ecpcFlexible Co-Data Learning for High-Dimensional Prediction
ecrEvolutionary Computation in R
ectotempQuantitative Estimates of Small Ectotherm Temperature Regulation Effectiveness
ECTTDNNCointegration Based Timedelay Neural Network Model
EcumeEquality of 2 (or k) Continuous Univariate and Multivariate Distributions
ed50Estimate ED50 and Its Confidence Interval
ed50simulationEstimate ED50 and Its Confidence Interval
EDAEnergy Decomposition Analysis
eda4treeRExperimental Design and Analysis for Tree Improvement
edbuildmaprDownload School District Geospatial Data, Perform Spatial Analysis, and Create Formatted Exportable Maps
edbuildrAutomated School District Data Download and Processing
edccEconomic Design of Control Charts
edciEdge Detection and Clustering in Images
edcpREcological Data Collection and Processing Package
eddiGet Evaporative Demand Drought Index Raster Data
eddingtonCompute a Cyclist's Eddington Number
edeaRExploratory and Descriptive Event-Based Data Analysis
edeREmail Data Extraction Using R
edfRead Data from European Data Format (EDF and EDF+) Files
EDFIREstimating Discrimination Factors
edfReaderReading EDF(+) and BDF(+) Files
EDFtestGoodness of Fit Based on Empirical Distribution Function
edfunCreating Empirical Distribution Functions
edgarTool for the U.S. SEC EDGAR Retrieval and Parsing of Corporate Filings
edgarWebRSEC Filings Access
edgebundleAlgorithms for Bundling Edges in Networks and Visualizing Flow and Metro Maps
edgebundleRCircle Plot with Bundled Edges
edgeCorrSpatial Edge Correction
edgedataDatasets that Support the EDGE Server DIY Logic
edgeRunMore Powerful Unconditional Testing of Negative Binomial Means for Digital Gene Expression Data
edinaBayesian Estimation of an Exploratory Deterministic Input, Noisy and Gate Model
EDISONNetwork Reconstruction and Changepoint Detection
editData'RStudio' Addin for Editing a 'data.frame'
editrulesParsing, Applying, and Manipulating Data Cleaning Rules
edlToolbox for Error-Driven Learning Simulations with Two-Layer Networks
eDMADynamic Model Averaging with Grid Search
edmcrEuclidean Distance Matrix Completion Tools
edmdataData Sets for Psychometric Modeling
EDMeasureEnergy-Based Dependence Measures
EDNE.EQImplements the EDNE-Test for Equivalence
EDOIFEmpirical Distribution Ordering Inference Framework (EDOIF)
EDOtransEuclidean Distance-Optimized Data Transformation
edrGraphicalToolsProvides Tools for Dimension Reduction Methods
edstanStan Models for Item Response Theory
EdSurveyAnalysis of NCES Education Survey and Assessment Data
educationdataRetrieve Records from the Urban Institute's Education Data Portal API
educineqCompute and Decompose Inequality in Education
edwards97Langmuir Semi-Empirical Coagulation Model
eechidnaExploring Election and Census Highly Informative Data Nationally for Australia
eefAnalyticsRobust Analytical Methods for Evaluating Educational Interventions using Randomised Controlled Trials Designs
eegkitToolkit for Electroencephalography Data
eegkitdataData for package eegkit
eelExtended Empirical Likelihood
EEMRead and Preprocess Fluorescence Excitation-Emission Matrix (EEM) Data
EEMDelmEnsemble Empirical Mode Decomposition and Its Variant Based ELM Model
EEMDSVREnsemble Empirical Mode Decomposition and Its Variant Based Support Vector Regression Model
eemdTDNNEEMD and Its Variant Based Time Delay Neural Network Model
eemRTools for Pre-Processing Emission-Excitation-Matrix (EEM) Fluorescence Data
eeptoolsConvenience Functions for Education Data
eesimSimulate and Evaluate Time Series for Environmental Epidemiology
EESPCAEigenvectors from Eigenvalues Sparse Principal Component Analysis (EESPCA)
efModelling Framework for the Estimation of Salmonid Abundance
EFA.dimensionsExploratory Factor Analysis Functions for Assessing Dimensionality
EFA.MRFADimensionality Assessment Using Minimum Rank Factor Analysis
EFAtoolsFast and Flexible Implementations of Exploratory Factor Analysis Tools
EFAutilitiesUtility Functions for Exploratory Factor Analysis
efdmImplement European Forestry Dynamics Model
EFDRWavelet-Based Enhanced FDR for Detecting Signals from Complete or Incomplete Spatially Aggregated Data
eff2Efficient Least Squares for Total Causal Effects
effectFusionBayesian Effect Fusion for Categorical Predictors
EffectLiteRAverage and Conditional Effects
effectRPredicts Oomycete Effectors
effectsEffect Displays for Linear, Generalized Linear, and Other Models
effectsizeIndices of Effect Size and Standardized Parameters
effectsizescrIndices for Single-Case Research
EffectsRelBaselineTest changes of a grouped response relative to baseline
EffectStarsVisualization of Categorical Response Models
EffectStars2Effect Stars
EffectTreatPrediction of Therapeutic Success
EfficientMaxEigenpairEfficient Initials for Computing the Maximal Eigenpair
efflogThe Causal Effects for a Causal Loglinear Model
effsizeEfficient Effect Size Computation
eflmEfficient Fitting of Linear and Generalized Linear Models
efreadrRead European Eddy Fluxes CSV Files
eFREDFetch Data from the Federal Reserve Economic Database
EFSTool for Ensemble Feature Selection
eftsHigh-Level Functions to Read and Write Ensemble Forecast Time Series in netCDF
egaError Grid Analysis
EGAnetExploratory Graph Analysis – a Framework for Estimating the Number of Dimensions in Multivariate Data using Network Psychometrics
egcmEngle-Granger Cointegration Models
eggExtensions for 'ggplot2': Custom Geom, Custom Themes, Plot Alignment, Labelled Panels, Symmetric Scales, and Fixed Panel Size
eggCountsHierarchical Modelling of Faecal Egg Counts
egorImport and Analyse Ego-Centered Network Data
EGRETExploration and Graphics for RivEr Trends
EGRETciExploration and Graphics for RivEr Trends Confidence Intervals
eGSTLeveraging eQTLs to Identify Individual-Level Tissue of Interest for a Complex Trait
ehaEvent History Analysis
ehaGoFCalculates Goodness of Fit Statistics
ehelpEnhanced Help to Enable "Docstring"-Comments in Users Functions
eHOFExtended HOF (Huisman-Olff-Fresco) Models
EHRElectronic Health Record (EHR) Data Processing and Analysis Tool
EHRtemporalVariabilityDelineating Temporal Dataset Shifts in Electronic Health Records
eiEcological Inference
ei.DatasetsReal Datasets for Assessing Ecological Inference Algorithms
eiaAPI Wrapper for 'US Energy Information Administration' Open Data
EIAdataR Wrapper for the Energy Information Administration (EIA) API
eicmExplicit Interaction Community Models
eiCompareCompares Ecological Inference, Goodman, Rows by Columns Estimates
eigeninvGenerates (dense) matrices that have a given set of eigenvalues
eigenmodelSemiparametric Factor and Regression Models for Symmetric Relational Data
eigenprcompComputes confidence intervals for principal components
EigenRComplex Matrix Algebra with 'Eigen'
eikosogramsThe Picture of Probability
EILAEfficient Inference of Local Ancestry
eimputeEfficiently Impute Large Scale Incomplete Matrix
einetEffective Information and Causal Emergence
einsumEinstein Summation
eiopaRAccess to RFR (Risk-Free Rate) Curves Produced by the EIOPA
eiPackEcological Inference and Higher-Dimension Data Management
eirmExplanatory Item Response Modeling for Dichotomous and Polytomous Items
eiveAn Algorithm for Reducing Errors-in-Variable Bias in Simple Linear Regression
eivtoolsMeasurement Error Modeling Tools
EIXExplain Interactions in 'XGBoost'
eixportExport Emissions to Atmospheric Models
EKMCMCMCMC Procedures for Estimating Enzyme Kinetics Constants
ELTwo-sample Empirical Likelihood
EL2SurvEmpirical Likelihood (EL) for Comparing Two Survival Functions
elaboratorA 'shiny' Application for Exploring Laboratory Data
elasdicsElastic Analysis of Sparse, Dense and Irregular Curves
elassoEnhanced Least Absolute Shrinkage and Selection Operator Regression Model
elasticGeneral Purpose Interface to 'Elasticsearch'
elasticIsingIsing Network Estimation using Elastic Net and k-Fold Cross-Validation
elasticnetElastic-Net for Sparse Estimation and Sparse PCA
elecCollection of Functions for Statistical Election Audits
elec.stratFunctions for election audits using stratified random samples
EleChemrElectrochemical Reactions Simulation
electEstimation of Life Expectancies Using Multi-State Models
electionsUSA Presidential Elections Data
electionsBRR Functions to Download and Clean Brazilian Electoral Data
electivityAlgorithms for Electivity Indices
electoralAllocating Seats Methods and Party System Scores
elementRAn Framework for Reducing Elemental LAICPMS Data from Solid Structures
elevatrAccess Elevation Data from Various APIs
elexrLoad Associated Press Election Results with Elex
elfDistrKumaraswamy Complementary Weibull Geometric (Kw-CWG) Probability Distribution
elhmcSampling from a Empirical Likelihood Bayesian Posterior of Parameters Using Hamiltonian Monte Carlo
ELISAtoolsELISA Data Analysis with Batch Correction
elisrExploratory Likert Scaling
eListList Comprehension and Tools
elitismEquipment for Logarithmic and Linear Time Stepwise Multiple Hypothesis Testing
elliplotEllipse Summary Plot of Quantiles
ellipseFunctions for Drawing Ellipses and Ellipse-Like Confidence Regions
ellipsisTools for Working with ...
ellipticWeierstrass and Jacobi Elliptic Functions
ellipticalsymmetryElliptical Symmetry Tests
elmNNRcppThe Extreme Learning Machine Algorithm
ELMRExtreme Machine Learning (ELM)
ELMSOImplementation of the Efficient Large-Scale Online Display Advertising Algorithm
EloChoicePreference Rating for Visual Stimuli Based on Elo Ratings
EloOptimizedOptimized Elo Rating Method for Obtaining Dominance Ranks
EloRatingAnimal Dominance Hierarchies by Elo Rating
elrmExact Logistic Regression via MCMC
elsaEntropy-Based Local Indicator of Spatial Association
ElstonStewartElston-Stewart Algorithm
ELTExperience Life Tables
eltrUtilise Catastrophe Model Event Loss Table Outputs
ELYPEmpirical Likelihood Analysis for the Cox Model and Yang-Prentice (2005) Model
EM.FuzzyEM Algorithm for Maximum Likelihood Estimation by Non-Precise Information
EMAtoolsData Management Tools for Real-Time Monitoring/Ecological Momentary Assessment Data
emayiliSend Email Messages
embaEnsemble Boolean Model Biomarker Analysis
EMbCExpectation-Maximization Binary Clustering
embedExtra Recipes for Encoding Predictors
EmbedSOMFast Embedding Guided by Self-Organizing Map
embryogrowthTools to Analyze the Thermal Reaction Norm of Embryo Growth
EMCEvolutionary Monte Carlo (EMC) algorithm
EMClusterEM Algorithm for Model-Based Clustering of Finite Mixture Gaussian Distribution
EMDEmpirical Mode Decomposition and Hilbert Spectral Analysis
EMDANNhybridEnsemble Machine Learning Hybrid Model
emdbookSupport Functions and Data for "Ecological Models and Data"
emdiEstimating and Mapping Disaggregated Indicators
emdistEarth Mover's Distance
EMDSVRhybridHybrid Machine Learning Model
emgExponentially Modified Gaussian (EMG) Distribution
emhawkesExponential Multivariate Hawkes Model
emIRTEM Algorithms for Estimating Item Response Theory Models
EmissVTools for Create Emissions for Air Quality Models
EmiStatREmissions and Statistics in R for Wastewater and Pollutants in Combined Sewer Systems
EMLRead and Write Ecological Metadata Language Files
emldEcological Metadata as Linked Data
eMLEloglinFitting log-Linear Models in Sparse Contingency Tables
emmaEvolutionary model-based multiresponse approach
EMMAgeoEnd-Member Modelling of Grain-Size Data
emme2Read and Write to an EMME/2 databank
emmeansEstimated Marginal Means, aka Least-Squares Means
EMMIXgeneA Mixture Model-Based Approach to the Clustering of Microarray Expression Data
EMMIXmfaMixture Models with Component-Wise Factor Analyzers
EMMLiA Maximum Likelihood Approach to the Analysis of Modularity
EMMREMLFitting Mixed Models with Known Covariance Structures
emoaEvolutionary Multiobjective Optimization Algorithms
emojiData and Function to Work with Emojis
emojifontEmoji and Font Awesome in Graphics
emonTools for Environmental and Ecological Survey Design
emovEye Movement Analysis Package for Fixation and Saccade Detection
EMPExpected Maximum Profit Classification Performance Measure
EMpeaksRConducting the Peak Fitting Based on the EM Algorithm
empicharEvaluates the Empirical Characteristic Function for Multivariate Samples
EmpiricalCalibrationRoutines for Performing Empirical Calibration of Observational Study Estimates
empiricalFDR.DESeq2Simulation-Based False Discovery Rate in RNA-Seq
emplikEmpirical Likelihood Ratio for Censored/Truncated Data
emplik2Empirical Likelihood Ratio Test for Two Samples with Censored Data
emsEpimed Solutions Collection for Data Editing, Analysis, and Benchmark of Health Units
EMSaovThe Analysis of Variance with EMS
EMSCExtended Multiplicative Signal Correction
EMSNMEM Algorithm for Sigmoid Normal Model
EMSSSome EM-Type Estimation Methods for the Heckman Selection Model
emstreeRTools for Fast Computing and Plotting Euclidean Minimum Spanning Trees
EMTExact Multinomial Test: Goodness-of-Fit Test for Discrete Multivariate Data
emulatorBayesian Emulation of Computer Programs
emuRMain Package of the EMU Speech Database Management System
EMVSThe Expectation-Maximization Approach to Bayesian Variable Selection
encPortable Tools for 'UTF-8' Character Data
EncDNAEncoding of Nucleotide Sequences into Numeric Feature Vectors
eNchangeEnsemble Methods for Multiple Change-Point Detection
encodeRepresent Ordered Lists and Pairs as Strings
encryptedRmdEncrypt Html Reports Using 'Libsodium'
encryptrEasily Encrypt and Decrypt Data Frame/Tibble Columns or Files using RSA Public/Private Keys
endogenousClassical Simultaneous Equation Models
endorseBayesian Measurement Models for Analyzing Endorsement Experiments
endoSwitchEndogenous Switching Regression Models
endtoendTransmissions and Receptions in an End to End Network
energyE-Statistics: Multivariate Inference via the Energy of Data
EnergyOnlineCPMDistribution Free Multivariate Control Chart Based on Energy Test
energyrData Published by the United States Federal Energy Regulatory Commission
enerscapeCompute Energy Landscapes
enetLTSRobust and Sparse Methods for High Dimensional Linear and Logistic Regression
englishTranslate Integers into English
EngrExptData sets from "Introductory Statistics for Engineering Experimentation"
engsoccerdataEnglish and European Soccer Results 1871-2016
ENMevalAutomated Tuning and Evaluations of Ecological Niche Models
ENMToolsAnalysis of Niche Evolution using Niche and Distribution Models
enplsEnsemble Partial Least Squares Regression
enRichAnalysis of Multiple ChIP-Seq Data
enrichRProvides an R Interface to 'Enrichr'
enrichwithMethods to Enrich R Objects with Extra Components
EnsCatClustering of Categorical Data
EnsembleBaseExtensible Package for Parallel, Batch Training of Base Learners for Ensemble Modeling
ensembleBMAProbabilistic Forecasting using Ensembles and Bayesian Model Averaging
EnsembleCVExtensible Package for Cross-Validation-Based Integration of Base Learners
ensembleMOSEnsemble Model Output Statistics
EnsemblePCRegExtensible Package for Principal-Component-Regression-Based Heterogeneous Ensemble Meta-Learning
EnsemblePenRegExtensible Classes and Methods for Penalized-Regression-Based Integration of Base Learners
ensembleppEnsemble Postprocessing Data Sets
ensembleREnsemble Models in R
ensembleTaxEnsemble Taxonomic Assignments of Amplicon Sequencing Data
ensrElastic Net SearcheR
ensurerEnsure Values at Runtime
entcnTranslate English Words into Chinese Words
entropartEntropy Partitioning to Measure Diversity
entropyEstimation of Entropy, Mutual Information and Related Quantities
EntropyEstimationEstimation of Entropy and Related Quantities
EntropyExplorerTools for Exploring Differential Shannon Entropy, Differential Coefficient of Variation and Differential Expression
EntropyMCMCMCMC Simulation and Convergence Evaluation using Entropy and Kullback-Leibler Divergence Estimation
entrymodelsEstimate Entry Models
envalysisMiscellaneous Functions for Environmental Analyses
EnvCptDetection of Structural Changes in Climate and Environment Time Series
envDocumentDocument the R Working Environment
enveomics.RVarious Utilities for Microbial Genomics and Metagenomics
EnvExpIndEnvironmental Exposure on the Individual Level
enviEnvironmental Interpolation using Spatial Kernel Density Estimation
enviGCMSGC/LC-MS Data Analysis for Environmental Science
enviPatIsotope Pattern, Profile and Centroid Calculation for Mass Spectrometry
enviPickPeak Picking for High Resolution Mass Spectrometry Data
envirManage R Environments Better
enviremGeneration of ENVIREM Variables
EnviroPRAEnvironmental Probabilistic Risk Assessment Tools
EnviroStatStatistical Analysis of Environmental Space-Time Processes
envlpasterEnveloping the Aster Model
envnamesKeep Track of User-Defined Environment Names
EnvNicheRNiche Estimation
EnvNJWhole Genome Phylogenies Using Sequence Environments
envoutliersMethods for Identification of Outliers in Environmental Data
EnvStatsPackage for Environmental Statistics, Including US EPA Guidance
eofficeExport or Graph and Tables to 'Microsoft' Office and Import Figures and Tables
eoRData Management Package (Exposure and Occurrence Data in R)
epadeEasy Plots
epandistStatistical Functions for the Censored and Uncensored Epanechnikov Distribution
epanet2toolkitCall 'EPANET' Functions to Simulate Pipe Networks
epanetReaderRead Epanet Files into R
epcaExploratory Principal Component Analysis
epccSimulating Populations of Ectotherms under Global Warming
ePCREnsemble Penalized Cox Regression for Survival Prediction
EPGMrImplementation of the Everglades Phosphorus Gradient Model
ephArgentina's Permanent Household Survey Data and Manipulation Utilities
EpiStatistical Analysis in Epidemiology
epibasixElementary Epidemiological Functions for Epidemiology and Biostatistics
epicontactsHandling, Visualisation and Analysis of Epidemiological Contacts
EpiContactTraceEpidemiological Tool for Contact Tracing
EpiCurvePlot an Epidemic Curve
epidataTools to Retrieve Economic Policy Institute Data Library Extracts
epidemiaModeling of Epidemics using Hierarchical Bayesian Models
epiDisplayEpidemiological Data Display Package
EpiDynamicsDynamic Models in Epidemiology
EpiEstimEstimate Time Varying Reproduction Numbers from Epidemic Curves
epifitterAnalysis and Simulation of Plant Disease Progress Curves
epiflowsPredicting Disease Spread from Flow Data
epigraphdbInterface Package for the 'EpiGraphDB' Platform
epiGWASRobust Methods for Epistasis Detection
EpiILMSpatial and Network Based Individual Level Models for Epidemics
EpiILMCTContinuous Time Distance-Based and Network-Based Individual Level Models for Epidemics
epikitMiscellaneous Tools for the 'R4Epis' Project
epimdrFunctions and Data for "Epidemics: Models and Data in R"
EpiModelMathematical Modeling of Infectious Disease Dynamics
epinetEpidemic/Network-Related Tools
epinetrEpistatic Network Modelling with Forward-Time Simulation
EpiNow2Estimate Real-Time Case Counts and Time-Varying Epidemiological Parameters
epiphyAnalysis of Plant Disease Epidemics
epiRTools for the Analysis of Epidemiological Data
EpiReportEpidemiological Report
episcanScan Pairwise Epistasis
episensrBasic Sensitivity Analysis of Epidemiological Results
episplineDensityDensity Estimation with Soft Information by Exponential Epi-splines
epistasisDetecting Epistatic Selection with Partially Observed Genotype Data
EpiStatsTools for Epidemiologists
EpistemicGameTheoryConstructing an Epistemic Model for the Games with Two Players
epitabFlexible Contingency Tables for Epidemiology
epitoolsEpidemiology Tools
epitrixSmall Helpers and Tricks for Epidemics Analysis
epitweetrEarly Detection of Public Health Threats from Twitter Data
EplotPlotting longitudinal series
eplusrA Toolkit for Using Whole Building Simulation Program 'EnergyPlus'
eplyApply a Function Over Expressions
epocEndogenous Perturbation Analysis of Cancer
epocakirClinical Coding of Patients with Kidney Disease
epongeKeep Your Environment Clean
eposEpilepsy Ontologies' Similarities
EPPEvaluation of Proximity Programs
eprEasy Polynomial Regression
epsiwalExact Post Selection Inference with Applications to the Lasso
EPTEnsemble Patch Transform, Visualization and Decomposition
epubrRead EPUB File Metadata and Text
epwshiftrCreate Future 'EnergyPlus' Weather Files using 'CMIP6' Data
EPXEnsemble of Phalanxes
epxToRImport 'Epidata' XML Files '.epx'
eq5dMethods for Analysing 'EQ-5D' Data and Calculating 'EQ-5D' Index Scores
EQLExtended-Quasi-Likelihood-Function (EQL)
eqs2lavaanEQS Output Conversion to lavaan Functions
eqtlTools for analyzing eQTL experiments: A complementary to Karl Broman's 'qtl' package for genome-wide analysis
equalCovsTesting the Equality of Two Covariance Matrices
Equalden.HDTesting the Equality of a High Dimensional Set of Densities
equaltestMIExamine Measurement Invariance via Equivalence Testing and Projection Method
equatagsEquations to 'XML'
equateObserved-Score Linking and Equating
equateIRTIRT Equating Methods
equateMultipleEquating of Multiple Forms
equatiomaticTransform Models into 'LaTeX' Equations
EquiSurvModeling, Confidence Intervals and Equivalence of Survival Curves
equivalenceProvides Tests and Graphics for Assessing Tests of Equivalence
equivalenceTestEquivalence Test for the Means of Two Normal Distributions
EQUIVNONINFTesting for Equivalence and Noninferiority
equivUMPUniformly Most Powerful Invariant Tests of Equivalence
EREffect + Residual Modelling
eraYears with an Era
erahAutomated Spectral Deconvolution, Alignment, and Metabolite Identification in GC/MS-Based Untargeted Metabolomics
erboostNonparametric Multiple Expectile Regression via ER-Boost
ercvFitting Tails by the Empirical Residual Coefficient of Variation
ererEmpirical Research in Economics with R
ergmFit, Simulate and Diagnose Exponential-Family Models for Networks
ergm.countFit, Simulate and Diagnose Exponential-Family Models for Networks with Count Edges
ergm.egoFit, Simulate and Diagnose Exponential-Family Random Graph Models to Egocentrically Sampled Network Data
ergm.rankFit, Simulate and Diagnose Exponential-Family Models for Rank-Order Relational Data
ergm.usertermsUser-specified Terms for the statnet Suite of Packages
ergMarginsProcess Analysis for Exponential Random Graph Models
ergmclustERGM-Based Network Clustering
ergmharrisLocal Health Department network data set
ergmitoExponential Random Graph Models for Small Networks
erifyCheck Arguments and Generate Readable Error Messages
eRmExtended Rasch Modeling
ERPSignificance Analysis of Event-Related Potentials Data
erp.easyEvent-Related Potential (ERP) Data Exploration Made Easy
erpREvent-related potentials (ERP) analysis, graphics and utility functions
errCustomizable Object Sensitive Messages
erratumHandle Error and Warning Messages
errintBuilds Error Intervals
erroristAutomatically Search Errors or Warnings
errorizerFunction Errorizer
errorlocateLocate Errors with Validation Rules
errorsUncertainty Propagation for R Vectors
errumExploratory Reduced Reparameterized Unified Model Estimation
ERSAExploratory Regression 'Shiny' App
eRTG3DEmpirically Informed Random Trajectory Generation in 3-D
ESEdge Selection
es.difCompute Effect Sizes of the Difference
esaBcvEstimate Number of Latent Factors and Factor Matrix for Factor Analysis
esaddleExtended Empirical Saddlepoint Density Approximations
esapsIndicators of Electoral Systems and Party Systems
esbackExpected Shortfall Backtesting
escEffect Size Computation for Meta Analysis
escalationModular Approach to Dose Finding Clinical Trials
esDesignAdaptive Enrichment Designs with Sample Size Re-Estimation
eSDMEnsemble Tool for Predictions from Species Distribution Models
ESEAESEA: Discovering the Dysregulated Pathways based on Edge Set Enrichment Analysis
eseisEnvironmental Seismology Toolbox
esemifarSmoothing Long-Memory Time Series
ESGA Package for Asset Projection
eshrinkShrinkage for Effect Estimation
esmiscMisc Functions of Eduard Szöcs
esmprepData Preparation During and After the Use of the Experience Sampling Methodology (ESM)
esquisseExplore and Visualize Your Data Interactively
esregJoint Quantile and Expected Shortfall Regression
essEfficient Stepwise Selection in Decomposable Models
essentialsEssential Functions not Included in Base R
essHistThe Essential Histogram
essurveyDownload Data from the European Social Survey on the Fly
estadisticaFundamentos De Estadistica Descriptiva e Inferencial
estatapiR Interface to e-Stat API
EstCRMCalibrating Parameters for the Samejima's Continuous IRT Model
ESTEREfficient Sequential Testing with Evidence Ratios
EstHerEstimation of Heritability in High Dimensional Sparse Linear Mixed Models using Variable Selection
estimabilityTools for Assessing Estimability of Linear Predictions
EstimateGroupNetworkPerform the Joint Graphical Lasso and Selects Tuning Parameters
EstimationToolsMaximum Likelihood Estimation for Probability Functions from Data Sets
estimatrFast Estimators for Design-Based Inference
EstimDiagnosticsDiagnostic Tools and Unit Tests for Statistical Estimators
estimrawEstimation of Four-Fold Table Cell Frequencies (Raw Data) from Effect Size Measures
estmeansdEstimating the Sample Mean and Standard Deviation from Commonly Reported Quantiles in Meta-Analysis
EstMixTumor Clones Percentage Estimations
estoutEstimates Output
estprodEstimation of Production Functions
EstSimPDMPEstimation and Simulation for PDMPs
estudy2An Implementation of Parametric and Nonparametric Event Study
esvisVisualization and Estimation of Effect Sizes
etableEasy Table
ETASModeling Earthquake Data Using 'ETAS' Model
etasFLPMixed FLP and ML Estimation of ETAS Space-Time Point Processes for Earthquake Description
ETCEquivalence to control
etherInteraction with the 'Ethereum' Blockchain
ethnobotanyRCalculate Quantitative Ethnobotany Indices
EthSEQEthnicity Annotation from Whole Exome Sequencing Data
etlExtract-Transform-Load Framework for Medium Data
ETLUtilsUtility Functions to Execute Standard Extract/Transform/Load Operations (using Package 'ff') on Large Data
etmEmpirical Transition Matrix
etmaEpistasis Test in Meta-Analysis
etrader'ETRADE' API Interface for R
etrmEnergy Trading and Risk Management
etrunctComputes Moments of Univariate Truncated t Distribution
EuclideanSDAn Euclidean View of Center and Spread
eudractCreates Safety Results Summary in XML to Upload to EudraCT
eulerianeulerian: A package to find eulerian paths from graphs
eulerrArea-Proportional Euler and Venn Diagrams with Ellipses
eurlexRetrieve Data on European Union Law
eurocordexrMakes it Easier to Work with Daily 'netCDF' from EURO-CORDEX RCMs
europepmcR Interface to the Europe PubMed Central RESTful Web Service
europopHistorical Populations of European Cities, 1500-1800
EurosarcBayesBayesian Single Arm Sample Size Calculation Software
eurostatTools for Eurostat Open Data
evaExtreme Value Analysis with Goodness-of-Fit Testing
evabicEvaluation of Binary Classifiers
EvalEstDynamic Systems Estimation - Extensions
evalITREvaluating Individualized Treatment Rules
evaluateParsing and Evaluation Tools that Provide More Details than the Default
EvaluateCoreQuality Evaluation of Core Collections
EvaluationMeasuresCollection of Model Evaluation Measure Functions
EValueSensitivity Analyses for Unmeasured Confounding and Other Biases in Observational Studies and Meta-Analyses
EvapotranspirationModelling Actual, Potential and Reference Crop Evapotranspiration
evclassEvidential Distance-Based Classification
evclustEvidential Clustering
EvCombREvidence Combination in R
evdFunctions for Extreme Value Distributions
evdbayesBayesian Analysis in Extreme Value Theory
eventEvent History Procedures and Models
eventdataREvent Data Repository
EventDetectGUIGraphical User Interface for the 'EventDetectR' Package
EventDetectREvent Detection Framework
eventglmRegression Models for Event History Outcomes
eventIntervalSequential Event Interval Analysis
eventrCreate Event Based Data Architectures
eventstreamStreaming Events and their Early Classification
eventstudiesEvent Study Analysis
EventStudyEvent Study Analysis
eventTrackEvent Prediction for Time-to-Event Endpoints
EventWinRatiosEvent-Specific Win Ratios for Terminal and Non-Terminal Events
evgamGeneralised Additive Extreme Value Models
evianEvidential Analysis of Genetic Association Data
evidenceAnalysis of Scientific Evidence Using Bayesian and Likelihood Methods
evidenceFactorsReporting Tools for Sensitivity Analysis of Evidence Factors in Observational Studies
EvidenceSynthesisSynthesizing Causal Evidence in a Distributed Research Network
evidentEvidence Factors in Observational Studies
EviewsR'Eviews' Knit-Engine
evirExtreme Values in R
evmixExtreme Value Mixture Modelling, Threshold Estimation and Boundary Corrected Kernel Density Estimation
evobiRComparative and Population Genetic Analyses
evolqgTools for Evolutionary Quantitative Genetics
EvolutionaryGamesImportant Concepts of Evolutionary Game Theory
evolvabilityCalculation of Evolvability Parameters
EvomorphEvolutionary Morphometric Simulation
evoperEvolutionary Parameter Estimation for 'Repast Simphony' Models
EvoRAGEvolutionary Rates Across Gradients
evt0Mean of order p, peaks over random threshold Hill and high quantile estimates
evtclassExtreme Value Theory for Open Set Classification - GPD and GEV Classifiers
evtreeEvolutionary Learning of Globally Optimal Trees
EWEdgeworth Expansion
EWGoFGoodness-of-Fit Tests for the Exponential and Two-Parameter Weibull Distributions
ewocEscalation with Overdose Control
EwREconometrics with R
EWSEarly Warning System
ExactUnconditional Exact Test
exact2x2Exact Tests and Confidence Intervals for 2x2 Tables
exactciExact P-Values and Matching Confidence Intervals for Simple Discrete Parametric Cases
ExactCIdiffInductive Confidence Intervals for the difference between two proportions
exactextractrFast Extraction from Raster Datasets using Polygons
exactLoglinTestMonte Carlo Exact Tests for Log-linear models
exactmetaExact fixed effect meta analysis
ExactMultinomMultinomial Goodness-of-Fit Tests
exactRankTestsExact Distributions for Rank and Permutation Tests
ExamPADataData Sets for Predictive Analytics Exam
exampletestrHelp for Writing Unit Tests Based on Function Examples
examsAutomatic Generation of Exams in R
exams.mylearnQuestion Generation in the 'MyLearn' XML Format
exams2sakaiAutomatic Generation of Exams in R for 'Sakai'
ExceedanceToolsConfidence regions for exceedance sets and contour lines
exceedProbConfidence Intervals for Exceedance Probability
excel.linkConvenient Data Exchange with Microsoft Excel
ExcelFunctionsRImports Excel Functions to R
excelRA Wrapper of the 'JavaScript' Library 'jExcel'
excelstripprExtracts Tabular Data from Excel Reports
excerptrExcerpt Structuring Comments from Your Code File and Set a Table of Contents
ExcessMassExcess Mass Calculation and Plots
excessmortExcess Mortality
excluderChecks for Exclusion Criteria in Online Data
exConInteractive Exploration of Contour Data
excursionsExcursion Sets and Contour Credibility Regions for Random Fields
exdexEstimation of the Extremal Index
exdqlmExtended Dynamic Quantile Linear Models
ExhaustiveSearchA Fast and Scalable Exhaustive Feature Selection Framework
exifRead EXIF Metadata from JPEGs
exifrEXIF Image Data in R
exiftoolrExifTool Functionality from R
ExomeDepthCalls Copy Number Variants from Targeted Sequence Data
exoplanetsAccess NASA's Exoplanet Archive Data
exp2fluxConvert Gene EXPression Data to FBA FLUXes
ExpAnalysis3dPacote Para Analise De Experimentos Com Graficos De Superficie Resposta
ExPanDaRExplore Your Data Interactively
expandFunctionsFeature Matrix Builder
expDBDatabase for Experiment Dataset
ExpDEModular Differential Evolution for Experimenting with Operators
ExpDesExperimental Designs Package
ExpDes.ptPacote Experimental Designs (Portugues)
expectregExpectile and Quantile Regression
experDesignDesign Experiments for Batches
experimentR Package for Designing and Analyzing Randomized Experiments
expertModeling without data using expert opinion
ExpertChoiceDesign of Discrete Choice and Conjoint Analysis
ExpImageTool For Analysis of Images in Experiments
expintExponential Integral and Incomplete Gamma Function
ExplainPredictionExplanation of Predictions for Classification and Regression Models
explorInteractive Interfaces for Results Exploration
exploratoryA Tool for Large-Scale Exploratory Analyses
exploreSimplifies Exploratory Data Analysis
exploreRTools for Quickly Exploring Data
expmMatrix Exponential, Log, 'etc'
exposeMultiple Effect Estimation of Chemicals in Environmental Epidemiology
ExPositionExploratory Analysis with the Singular Value Decomposition
exppSpatial Analysis of Extra-Pair Paternity
exppermComputing Expectations and Marginal Likelihoods for Permutations
ExpRepExperiment Repetitions
expSBMAn Exponential Stochastic Block Model for Interaction Lengths
expsmoothData Sets from "Forecasting with Exponential Smoothing"
expssTables, Labels and Some Useful Functions from Spreadsheets and 'SPSS' Statistics
exptestTests for Exponentiality
exreportFast, Reliable and Elegant Reproducible Research
EXRQExtreme Regression of Quantiles
exsicConvenience Functions for Botanists to Create Specimens Indices
ExtDistExtending the Range of Functions for Probability Distributions
extdplyrData Manipulation Extensions of 'Dplyr' and 'Tidyr'
extendedFamilyAdditional Families for Generalized Linear Models
exteriorMatchConstructs the Exterior Match from Two Matched Control Groups
extfunnelAdditional Funnel Plot Augmentations
extlassoMaximum penalized likelihood estimation with extended lasso penalty
ExtMallowsAn Extended Mallows Model and Its Hierarchical Version for Ranked Data Aggregation
extraBinomialExtra-binomial approach for pooled sequencing data
ExtractTrainDataExtract Values from Raster
extraDistrAdditional Univariate and Multivariate Distributions
extrafontTools for using fonts
extrafontdbPackage for holding the database for the extrafont package
extraoperatorsExtra Binary Relational and Logical Operators
extrasHelper Functions for Bayesian Analyses
extraterrestrialAstrobiology Equations Estimating Extraterrestrial Life
extraTreesExtremely Randomized Trees (ExtraTrees) Method for Classification and Regression
extRatumSummary Statistics for Geospatial Features
extRCExtended RC Models for Contingency Tables
ExtremalDepExtremal Dependence Models
ExtremeBoundsExtreme Bounds Analysis (EBA)
extremefitEstimation of Extreme Conditional Quantiles and Probabilities
extremeIndexForecast Verification for Extreme Events
ExtremeRisksExtreme Risk Measures
extRemesExtreme Value Analysis
extremeStatExtreme Value Statistics and Quantile Estimation
extremevaluesUnivariate Outlier Detection
extremisStatistics of Extremes
extremogramEstimation of Extreme Value Dependence for Time Series Data
extWeibQuantEstimate Lower Extreme Quantile with the Censored Weibull MLE and Censored Weibull Mixture
exuberEconometric Analysis of Explosive Time Series
eyeAnalysis of Eye Data
eyedataOpen Source Ophthalmic Data Sets Curated for R
eyelinkerImport ASC Files from EyeLink Eye Trackers
eyeReadPrepare/Analyse Eye Tracking Data for Reading
eyetrackingEyetracking Helper Functions
eyetrackingREye-Tracking Data Analysis
eyeTrackROrganising and Analysing Eye-Tracking Data
ezEasy Analysis and Visualization of Factorial Experiments
ez.combatEasy ComBat Harmonization
ezcoxEasily Process a Batch of Cox Models
ezCutoffsFit Measure Cutoffs in SEM
ezecEasy Interface to Effective Concentration Calculations
ezEDATask Oriented Interface for Exploratory Data Analysis
ezglmselects significant non-additive interaction between two variables using fast GLM implementation
ezknitrAvoid the Typical Working Directory Pain When Using 'knitr'
ezmmekEasy Michaelis-Menten Enzyme Kinetics
ezpickrEasy Data Import Using GUI File Picker
ezplotFunctions for Common Chart Types
ezrEasy Use of R via Shiny App for Basic Analyses of Experimental Data
ezsimprovide an easy to use framework to conduct simulation
EZtuneTunes AdaBoost, Elastic Net, Support Vector Machines, and Gradient Boosting Machines
fabCIFAB Confidence Intervals
FABInferenceFAB p-Values and Confidence Intervals
fabisearchChange Point Detection in High-Dimensional Time Series Networks
fableForecasting Models for Tidy Time Series
fable.ata'ATAforecasting' Modelling Interface for 'fable' Framework
fable.prophetProphet Modelling Interface for 'fable'
fabletoolsCore Tools for Packages in the 'fable' Framework
fabMixOverfitting Bayesian Mixtures of Factor Analyzers with Parsimonious Covariance and Unknown Number of Components
fabricatrImagine Your Data Before You Collect It
fabricerinCreate Easily Canvas in 'shiny' and 'RMarkdown' Documents
faceFast Covariance Estimation for Sparse Functional Data
facerecAn Interface for Face Recognition
facilitationA C++ Framework for Plant-Plant Interaction IBMs
FacPadBayesian Sparse Factor Analysis model for the inference of pathways responsive to drug treatment
factivInstrumental Variables Estimation for 2^k Factorial Experiments
FactMixtAnalysisFactor Mixture Analysis with covariates
FACTMLEMaximum Likelihood Factor Analysis
FactoClassCombination of Factorial Methods and Cluster Analysis
factoextraExtract and Visualize the Results of Multivariate Data Analyses
FactoInvestigateAutomatic Description of Factorial Analysis
FactoMineRMultivariate Exploratory Data Analysis and Data Mining
factoptdFactorial Optimal Designs for Two-Colour cDNA Microarray Experiments
factor.switchingPost-Processing MCMC Outputs of Bayesian Factor Analytic Models
FactorAssumptionsSet of Assumptions for Factor and Principal Component Analysis
FactorCopulaFactor Copula Models for Mixed Continuous and Discrete Data
factorExDesign and Analysis for Factorial Experiments
factorial2x2Design and Analysis of a 2x2 Factorial Trial
factorMergerThe Merging Path Plot
factormodelFactor Model Estimation Using Proxy Variables
factorplotGraphical Presentation of Simple Contrasts
factorQRBayesian quantile regression factor models
FactorsRIdentification of the Factors Affecting Species Richness
factorstochvolBayesian Estimation of (Sparse) Latent Factor Stochastic Volatility Models
factoryBuild Function Factories
FactoshinyPerform Factorial Analysis from 'FactoMineR' with a Shiny Application
factset.analyticsapi.engines'FactSet' Engines API Client
factualRthin wrapper for the Factual.com server API
fadFactor Analysis for Data
FADAVariable Selection for Supervised Classification in High Dimension
FAdistDistributions that are Sometimes Used in Hydrology
FADPclustFunctional Data Clustering Using Adaptive Density Peak Detection
FahrmeirData from the Book "Multivariate Statistical Modelling Based on Generalized Linear Models", First Edition, by Ludwig Fahrmeir and Gerhard Tutz
failFile Abstraction Interface Layer (FAIL)
fairadaptFair Data Adaptation with Quantile Preservation
FAIRmaterialsMake Materials Data FAIR
FairMclusClustering for Data with Sensitive Attribute
fairmlFair Models in Machine Learning
fairmodelsFlexible Tool for Bias Detection, Visualization, and Mitigation
fairnessAlgorithmic Fairness Metrics
fairsubsetChoose Representative Subsets
faisalconjointFaisal Conjoint Model: A New Approach to Conjoint Analysis
fakemakeMock the Unix Make Utility
fakeRSimulates Data from a Data Frame of Different Variable Types
falconFinding Allele-Specific Copy Number in Next-Generation Sequencing Data
falconxFinding Allele-Specific Copy Number in Whole-Exome Sequencing Data
fam.recriskFamilial Recurrence Risk
fam2rFrom 'Familias' to R
fameInterface for FAME Time Series Database
FAMetAFatty Acid Metabolic Analysis
FamEventFamily Age-at-Onset Data Simulation and Penetrance Estimation
FamiliasProbabilities for Pedigrees Given DNA Data
FAMILYA Convex Formulation for Modeling Interactions with Strong Heredity
FamilyRankAlgorithm for Ranking Predictors Using Graphical Domain Knowledge
FAmleMaximum Likelihood and Bayesian Estimation of Univariate Probability Distributions
FAMoSA Flexible Algorithm for Model Selection
famSKATRCFamily Sequence Kernel Association Test for Rare and Common Variants
FAMTFactor Analysis for Multiple Testing (FAMT) : simultaneous tests under dependence in high-dimensional data
fancPenalized Likelihood Factor Analysis via Nonconvex Penalty
fANCOVANonparametric Analysis of Covariance
fancycutA Fancy Version of 'base::cut'
fanovaGraphBuilding Kriging Models from FANOVA Graphs
fanplotVisualisation of Sequential Probability Distributions Using Fan Charts
fansiANSI Control Sequence Aware String Functions
FAO56Evapotranspiration Based on FAO Penman-Monteith Equation
FAOSTATDownload Data from the FAOSTAT Database
faoutlierInfluential Case Detection Methods for Factor Analysis and Structural Equation Models
faqCreate FAQ Page
farModelization for Functional AutoRegressive Processes
farawayFunctions and Datasets for Books by Julian Faraway
FARDEEPFast and Robust Deconvolution of Tumor Infiltrating Lymphocyte from Expression Profiles using Least Trimmed Squares
farffA Faster 'ARFF' File Reader and Writer
FarmSelectFactor Adjusted Robust Model Selection
FarmTestFactor-Adjusted Robust Multiple Testing
farrellInteractive Interface to Data Envelopment Analysis Modeling
farverHigh Performance Colour Space Manipulation
fasano.franceschini.testFasano-Franceschini Test: A 2-D Kolmogorov-Smirnov Two-Sample Test
FASegJoint Segmentation of Correlated Time Series
fasiFair Adjusted Selective Inference
fAsianOptionsRmetrics - EBM and Asian Option Valuation
fasjemA Fast and Scalable Joint Estimator for Learning Multiple Related Sparse Gaussian Graphical Models
fAssetsRmetrics - Analysing and Modelling Financial Assets
fasstrAnalyze, Summarize, and Visualize Daily Streamflow Data
fastaFast Adaptive Shrinkage/Thresholding Algorithm
fastAdaboosta Fast Implementation of Adaboost
fastaiInterface to 'fastai'
FastBandCholFast Estimation of a Covariance Matrix by Banding the Cholesky Factor
fastclimeA Fast Solver for Parameterized LP Problems, Constrained L1 Minimization Approach to Sparse Precision Matrix Estimation and Dantzig Selector
fastclusterFast Hierarchical Clustering Routines for R and 'Python'
fastcmhSignificant Interval Discovery with Categorical Covariates
fastcmprskFine-Gray Regression via Forward-Backward Scan
fastCorrDiffFast Differential Correlation Matrix Screening
fastcoxLasso and Elastic-Net Penalized Cox's Regression in High Dimensions Models using the Cocktail Algorithm
FastCUBFast EM and Best-Subset Selection for CUB Models for Rating Data
fastdigestFast, Low Memory-Footprint Digests of R Objects
fastDummiesFast Creation of Dummy (Binary) Columns and Rows from Categorical Variables
fasterasterRaster Image Processing and Vector Recognition
fasterElasticNetAn Amazing Fast Way to Fit Elastic Net
fasterizeFast Polygon to Raster Conversion
FastGaSPFast and Exact Computation of Gaussian Stochastic Process
fastGHQuadFast 'Rcpp' Implementation of Gauss-Hermite Quadrature
fastglmFast and Stable Fitting of Generalized Linear Models using 'RcppEigen'
FastGPEfficiently Using Gaussian Processes with Rcpp and RcppEigen
fastGraphFast Drawing and Shading of Graphs of Statistical Distributions
FastHCSRobust Algorithm for Principal Component Analysis
fastHICAHierarchical Independent Component Analysis: a Multi-Scale Sparse Non-Orthogonal Data-Driven Basis
fastICAFastICA Algorithms to Perform ICA and Projection Pursuit
fastJTEfficient Jonckheere-Terpstra Test Statistics
FastKMA Fast Multiple-Kernel Method Based on a Low-Rank Approximation
fastkmedoidsFaster K-Medoids Clustering Algorithms: FastPAM, FastCLARA, FastCLARANS
FastKNNFast k-Nearest Neighbors
fastLaplaceA Fast Laplace Method for Spatial Generalized Linear Mixed Model
fastLinkFast Probabilistic Record Linkage with Missing Data
fastlogitMEBasic Marginal Effects for Logit Models
fastlogranktestA Fast Way to Calculate the p-Value of One or Multiple Log-Rank-Tests
FastLZeroSpikeInferenceFast Nonconvex Deconvolution of Calcium Imaging Data
fastMFast Computation of Multivariate M-Estimators
fastmapFast Data Structures
fastmaRchingFast Marching Method for Modelling Evolving Boundaries
fastmatchFast 'match()' Function
fastmatrixFast Computation of some Matrices Useful in Statistics
fastmitFast Mutual Information Based Independence Test
fastNaiveBayesExtremely Fast Implementation of a Naive Bayes Classifier
fastnetLarge-Scale Social Network Analysis
fastOnlineCptOnline Multivariate Changepoint Detection
FastPCSFastPCS Robust Fit of Multivariate Location and Scatter
fastposFinds the Critical Sequential Point of Stability for a Pearson Correlation
fastpseudoFast Pseudo Observations
fastqcrQuality Control of Sequencing Data
fastqqFaster Generation of Quantile Quantile Plots with Large Samples
fastR2Foundations and Applications of Statistics Using R (2nd Edition)
FastRCSFits the FastRCS Robust Multivariable Linear Regression Model
fastRGSample Generalized Random Dot Product Graphs in Linear Time
fastrmodelsModels for the 'nflfastR' Package
FastRWebFast Interactive Framework for Web Scripting Using R
FastSFFast Structural Filtering
fastSOMFast Calculation of Spillover Measures
fastTextEfficient Learning of Word Representations and Sentence Classification
fastTextRAn Interface to the 'fastText' Library
fasttimeFast Utility Function for Time Parsing and Conversion
fastverseA Suite of High-Performance Packages for Statistics and Data Manipulation
fat2LpolyTwo-Locus Family-Based Association Test with Polytomous Outcome
FateIDQuantification of Fate Bias in Multipotent Progenitors
FatTailsRKiener Distributions and Fat Tails in Finance
FaultTreeFault Trees for Risk and Reliability Analysis
fauxSimulation for Factorial Designs
fauxnaifConvert Values to NA
fauxpasHTTP Error Helpers
faviconPleaseFind the URL to the 'Favicon' for a Website
favnumsA Dataset of Favourite Numbers
FAwRFunctions and Datasets for "Forest Analytics with R"
fbarAn Extensible Approach to Flux Balance Analysis
fBasicsRmetrics - Markets and Basic Statistics
fbatiGene by Environment Interaction and Conditional Gene Tests for Nuclear Families
FBFsearchAlgorithm for Searching the Space of Gaussian Directed Acyclic Graph Models Through Moment Fractional Bayes Factors
FBNFISH Based Normalization and Copy Number inference of SNP microarray data
fBondsRmetrics - Pricing and Evaluating Bonds
fbRadsAnalyzing and Managing Facebook Ads from R
fbRanksAssociation Football (Soccer) Ranking via Poisson Regression
fbrocFast Algorithms to Bootstrap Receiver Operating Characteristics Curves
fbstThe Full Bayesian Evidence Test, Full Bayesian Significance Test and the e-Value
fcStandard Evaluation-Based Multivariate Function Composition
fcaRFormal Concept Analysis
fcciFeldman-Cousins Confidence Intervals
fcdFused Community Detection
fCertificatesBasics of Certificates and Structured Products Valuation
FCGRFatigue Crack Growth in Reliability
FcircSECFull Length Circular RNA Sequence Extraction and Classification
fclustFuzzy Clustering
fcmInference of Fuzzy Cognitive Maps (FCMs)
FCMapperFuzzy Cognitive Mapping
fCopulaeRmetrics - Bivariate Dependence Structures with Copulae
FCPSFundamental Clustering Problems Suite
fcrFunctional Concurrent Regression for Sparse Data
fcrosA Method to Search for Differentially Expressed Genes and to Detect Recurrent Chromosomal Copy Number Aberrations
FCSlibA Collection of Fluorescence Fluctuation Spectroscopy Analysis Methods
fctbasesFunctional Bases
fcukThe Ultimate Helper for Clumsy Fingers
FCVAREstimation and Inference for the Fractionally Cointegrated VAR
FDMeasuring functional diversity (FD) from multiple traits, and other tools for functional ecology
fdaFunctional Data Analysis
fda.uscFunctional Data Analysis and Utilities for Statistical Computing
fdaACFAutocorrelation Function for Functional Time Series
fdadensityFunctional Data Analysis for Density Functions by Transformation to a Hilbert Space
fdakmaFunctional Data Analysis: K-Mean Alignment
fdaMixedFunctional Data Analysis in a Mixed Model Framework
fdaMoccaModel-Based Clustering for Functional Data with Covariates
fdANOVAAnalysis of Variance for Univariate and Multivariate Functional Data
fdaoutlierOutlier Detection Tools for Functional Data Analysis
fdapaceFunctional Data Analysis and Empirical Dynamics
fdapaceShinyA Shiny App for the 'fdapace' Package
fdaPDEStatistical Analysis of Functional and Spatial Data, Based on Regression with PDE Regularization
fdaPOIFDPartially Observed Integrated Functional Depth
fdasrvfElastic Functional Data Analysis
fdatestInterval Testing Procedure for Functional Data
FDboostBoosting Functional Regression Models
fdcovAnalysis of Covariance Operators
fddmFast Implementation of the Diffusion Decision Model
fdistrFrequency Distribution Tables
fdm2idData Mining and R Programming for Beginners
fDMADynamic Model Averaging and Dynamic Model Selection for Continuous Outcomes
fdqForest Data Quality
fdrciPermutation-Based FDR Point and Confidence Interval Estimation
fdrDiscreteNullFalse Discovery Rate Procedures Under Discrete and Heterogeneous Null Distributions
FDRestimationEstimate, Plot, and Summarize False Discovery Rates
FDRregFalse discovery rate regression
FDRsampsizeCompute Sample Size that Meets Requirements for Average Power and FDR
FDRSegFDR-Control in Multiscale Change-Point Segmentation
fdrtoolEstimation of (Local) False Discovery Rates and Higher Criticism
fdsFunctional Data Sets
fdthFrequency Distribution Tables, Histograms and Polygons
FDXFalse Discovery Exceedance Controlling Multiple Testing Procedures
FeaLectScores Features for Feature Selection
feamiRClassification and Feature Selection for microRNA/mRNA Interactions
feastsFeature Extraction and Statistics for Time Series
featherR Bindings to the Feather 'API'
featureLocal Inferential Feature Significance for Multivariate Kernel Density Estimation
featureCorMatrixMeasurement Level Independent Feature Correlation Matrix
featurefinderFeature Finder
featureflagTurn Features On and Off using Feature Flags
FeatureHashingCreates a Model Matrix via Feature Hashing with a Formula Interface
FeatureImpClusterFeature Importance for Partitional Clustering
featuresFeature Extraction for Discretely-Sampled Functional Data
FeatureTerminatoRFeature Selection Engine to Remove Features with Minimal Predictive Power
featuretoolsRInteract with the 'Python' Module 'Featuretools'
featurizerSome Helper Functions that Help Create Features from Data
fec16Data Package for the 2016 United States Federal Elections
fechnerFechnerian Scaling of Discrete Object Sets
FedDataFunctions to Automate Downloading Geospatial Data Available from Several Federated Data Sources
federalregisterClient Package for the U.S. Federal Register API
fedmatchFast, Flexible, and User-Friendly Record Linkage Methods
fedregsText Analysis of the US Code of Federal Regulations
fedstatAPIrUnofficial API for Fedstat (EMISS) for Automatic and Efficient Data Queries
FeedbackTSAnalysis of Feedback in Time Series
feisrEstimating Fixed Effects Individual Slope Models
fellovFeasible Ellipse Overlap
felpFunctional Help for Functions, Objects, and Packages
fenceUsing Fence Methods for Model Selection
FENmlmFixed Effects Nonlinear Maximum Likelihood Models
FEprovideRFixed Effects Logistic Model with High-Dimensional Parameters
FERFinancial Engineering in R
fergmEstimation and Fit Assessment of Frailty Exponential Random Graph Models
fermicatsRFermi Large Area Telescope Catalogs
ferrnFacilitate Exploration of touRR optimisatioN
FertBootFertilizer Response Curve Analysis by Bootstrapping Residuals
FEStaFishing Effort Standardisation
fExoticOptionsRmetrics - Pricing and Evaluating Exotic Option
fExpressCertificatesStructured Products Valuation for ExpressCertificates/Autocallables
fExtremesRmetrics - Modelling Extreme Events in Finance
ffMemory-Efficient Storage of Large Data on Disk and Fast Access Functions
ffbaseBasic Statistical Functions for Package 'ff'
FFDFreedom from Disease
FFdownloadDownload Data from Kenneth French's Website
FFieldForce field simulation for a set of points
fflrRetrieve ESPN Fantasy Football Data
ffmanovaFifty-Fifty MANOVA
ffmetadataAccess to Fragile Families Metadata
ffpStress Test Historical Scenarios with Fully Flexible Probabilities
ffscraprAPI Client for Fantasy Football League Platforms
ffsimulatorSimulate Fantasy Football Seasons
ffstreamForgetting Factor Methods for Change Detection in Streaming Data
fftwFast FFT and DCT Based on the FFTW Library
fftwtoolsWrapper for 'FFTW3' Includes: One-Dimensional, Two-Dimensional, Three-Dimensional, and Multivariate Transforms
fgacGeneralized Archimedean Copula
FGalgorithmFlury and Gautschi algorithms
fGarchRmetrics - Autoregressive Conditional Heteroskedastic Modelling
fgdrUtilities for Fundamental Geo-Spatial Data
fgeoAnalyze Forest Diversity and Dynamics
fgeo.analyzeAnalyze ForestGEO Data
fgeo.plotPlot ForestGEO Data
fgeo.toolImport and Manipulate 'ForestGEO' Data
fgeo.xAccess Small ForestGEO Datasets For Examples
fglsnetA Feasible Generalized Least Squares Estimator for Regression Analysis of Outcomes with Network Dependence
fgmPartial Separability and Functional Gaussian Graphical Models
FgmutilsForest Growth Model Utilities
fgofFast Goodness-of-fit Test
fgptFloating Grid Permutation Technique
FGSGFeature Grouping and Selection Over an Undirected Graph
fguiFunction GUI
FHDIFractional Hot Deck and Fully Efficient Fractional Imputation
fhircrackrHandling HL7 FHIR Resources in R
fHMMFitting Hidden Markov Models to Financial Data
FHtestTests for Right and Interval-Censored Survival Data Based on the Fleming-Harrington Class
FIProvide functions for forest inventory calculations
fiberLDFiber Length Determination
ficFocused Information Criteria for Model Comparison
fICAClassical, Reloaded and Adaptive FastICA Algorithms
fidapAccess Clean External Data Easily
fideliusBrowser-Side Password-Protected HTML Documents
FielDHubA Shiny App for Design of Experiments in Life Sciences
fieldRSRemote Sensing Field Work Tools
fieldsTools for Spatial Data
FieldSimRandom Fields (and Bridges) Simulations
fieryA Lightweight and Flexible Web Framework
figpatchEasily Arrange External Figures with Patchwork Alongside 'ggplot2' Figures
file2mecoTransform Files to 'microtable' Object with 'microeco' Package
filearrayFile-Backed Array for Out-of-Memory Computation
filehashSimple Key-Value Database
filehashSQLiteSimple key-value database using SQLite
filelockPortable File Locking
filematrixFile-Backed Matrix Class with Convenient Read and Write Access
filenamerEasy Management of File Names
filesEffective File Navigation from the R Console
filesstringsHandy File and String Manipulation
FILESTFine-Level Structure Simulator
fillingMatrix Completion, Imputation, and Inpainting Methods
fillrFill Missing Values in Vectors
filterNHPNon-Human Primate Search Filters
fImportRmetrics - Importing Economic and Financial Data
finalfitQuickly Create Elegant Regression Results Tables and Plots when Modelling
FinAnaFinancial Analysis and Regression Diagnostic Analysis
FinancialInstrumentFinancial Instrument Model Infrastructure and Meta-Data
FinancialMathFinancial Mathematics for Actuaries
FinAsymClassifies implicit trading activity from market quotes and computes the probability of informed trading
finbifInterface for the 'Finnish Biodiversity Information Facility' API
FinCalTime Value of Money, Time Series Analysis and Computational Finance
finchParse Darwin Core Files
FinCovRegularizationCovariance Matrix Estimation and Regularization for Finance
FindAllRootsFind all root(s) of the equation and Find root(s) of the equation by dichotomy
findInFilesFind Pattern in Files
findInGitFind Pattern in Files of All Branches of a 'git' Repository
FindItFinding Heterogeneous Treatment Effects
findpythonFunctions to Find an Acceptable Python Binary
findRFind Code Snippets, R Scripts, R Markdown, PDF and Text Files with Pattern Matching
findviewsA View Generator for Multidimensional Data
FinePopFine-Scale Population Analysis
FinePop2Fine-Scale Population Analysis (Rewrite for Gene-Trait-Environment Interaction Analysis)
finetuneAdditional Functions for Model Tuning
fingerprintFunctions to Operate on Binary Fingerprint Data
fingerProSediment Source Fingerprinting
finiteruinprobComputation of the Probability of Ruin Within a Finite Time Horizon
finityTest for Finiteness of Moments in a Distribution
finreportrFinancial Data from U.S. Securities and Exchange Commission
FinTSCompanion to Tsay (2005) Analysis of Financial Time Series
fipeAccess to Average Purchase Price of Vehicles in Brazil
fipioLightweight Federal Information Processing System (FIPS) Code Information Retrieval
fippInduced Priors in Bayesian Mixture Models
FiREFinder of Rare Entities (FiRE)
firebaseIntegrates 'Google Firebase' Authentication Method with 'Shiny'
firebehavioRPrediction of Wildland Fire Behavior and Hazard
FiscoreEffective Protein Structural Data Visualisation and Exploration
FiShFisher-Shannon Method
fishbcFishes of British Columbia
fishdataA Small Collection of Fish Population Datasets
FisherEMThe FisherEM Algorithm to Simultaneously Cluster and Visualize High-Dimensional Data
fisheyeRFisheye and Hyperbolic-space-alike Interactive Visualization Tools in R
fishfluxModel Elemental Fluxes in Fishes
FisHiCalIterative FISH-based Calibration of Hi-C Data
fishkirkko2015Dataset of Measurements of Fish Species at Kirkkojarvi Lake, Finland
fishmethodsFishery Science Methods and Models
fishModFits Poisson-Sum-of-Gammas GLMs, Tweedie GLMs, and Delta Log-Normal Models
fishmovePrediction of Fish Movement Parameters
FishPhyloMakerPhylogenies for a List of Finned-Ray Fishes
FishRespAnalytical Tool for Aquatic Respirometry
fishtreeInterface to the Fish Tree of Life API
fishualizeColor Palettes Based on Fish Species
FisProFuzzy Inference System Design and Optimization
FITTranscriptomic Dynamics Models in Field Conditions
fit.modelsCompare Fitted Models
FitARSubset AR Model Fitting
FitARMAFit ARMA or ARIMA Using Fast MLE Algorithm
fitbitrInterface with the 'Fitbit' API
fitbitScraperScrapes Data from Fitbit
fitbitViz'Fitbit' Visualizations
fitConicFit Data to Any Conic Section
fitdcGarmin FIT File Decoder
fitdistrplusHelp to Fit of a Parametric Distribution to Non-Censored or Censored Data
fitDRCFitting Density Ratio Classes
fitHeavyTailMean and Covariance Matrix Estimation under Heavy Tails
fitmixFinite Mixture Model Fitting of Lifespan Datasets
fitODBODModeling Over Dispersed Binomial Outcome Data Using BMD and ABD
fitplcFit Hydraulic Vulnerability Curves
fitPolyGenotype Calling for Bi-Allelic Marker Assays
FITSioFITS (Flexible Image Transport System) Utilities
fitteRFit Hundreds of Theoretical Distributions to Empirical Data
fitTetrafitTetra is an R package for assigning tetraploid genotype scores
FitUltDFit Univariate Mixed and Usual Distributions
fiturFit Univariate Distributions
fitzRoyEasily Scrape and Process AFL Data
fivethirtyeightData and Code Behind the Stories and Interactives at 'FiveThirtyEight'
FixedPointAlgorithms for Finding Fixed Point Vectors of Functions
fixedTimeEventsThe Distribution of Distances Between Discrete Events in Fixed Time
fixerapiAn R Client for the "Fixer.io" Currency API
fixestFast Fixed-Effects Estimations
FixSeqMTPFixed Sequence Multiple Testing Procedures
fizzbuzzRFizz Buzz Implementation
FKFFast Kalman Filter
FKF.SPFast Kalman Filtering Through Sequential Processing
FKSUMFast Kernel Sums
flaccoFeature-Based Landscape Analysis of Continuous and Constrained Optimization Problems
flagrImplementation of Flag Aggregation
flairHighlight, Annotate, and Format your R Source Code
flamFits Piecewise Constant Models with Data-Adaptive Knots
FLAMEInterpretable Matching for Causal Inference
flametreeGenerate Random Tree-Like Images
flamingosFunctional Latent Data Models for Clustering Heterogeneous Curves ('FLaMingos')
flanFLuctuation ANalysis on Mutation Models
flareFamily of Lasso Regression
flarsFunctional LARS
flashCardCreate a Flash Card
flashClustImplementation of optimal hierarchical clustering
flashlightShed Light on Black Box Machine Learning Models
flatnessIndices and Tests for Assessing the Flatness of (Rank) Histograms
flatrTransforms Contingency Tables to Data Frames, and Analyses Them
flattablerObtaining a Flat Table from Pivot Tables
flatxmlTools for Working with XML Files as R Dataframes
flexclustFlexible Cluster Algorithms
flexCWMFlexible Cluster-Weighted Modeling
flexdashboardR Markdown Format for Flexible Dashboards
FlexDirTools to Work with the Flexible Dirichlet Distribution
FlexGAMGeneralized Additive Models with Flexible Response Functions
flexiblas'FlexiBLAS' API Interface
flexmetFlexible Latent Trait Metrics using the Filtered Monotonic Polynomial Item Response Model
flexmixFlexible Mixture Modeling
flexmixNLFinite Mixture Modeling of Generalized Nonlinear Models
FlexParamCurveTools to Fit Flexible Parametric Curves
flexpolylineFlexible Polyline Encoding
FlexRegRegression Models for Bounded Responses
flexrsurvFlexible Relative Survival Analysis
FlexScanFlexible Scan Statistics
flexsurvFlexible Parametric Survival and Multi-State Models
flexsurvcureFlexible Parametric Cure Models
flextableFunctions for Tabular Reporting
FlickrAPIAccess to Flickr API
flifoDon't Get Stuck with Stacks in R
flightplanningUAV Flight Planning
flightplotPlotting Flight Paths on Maps
flintyRFlexible and Interpretable Non-Parametric Tests of Exchangeability
flipMultivariate Permutation Tests
flipbookrParses Code, Creates Partial Code Builds, Delivers Code Movie
flipdownrImplement a Countdown in 'RMarkdown' Documents and 'shiny' Applications
flipdownWidgetsA Wrapper of JavaScript Library 'flipdown.js'
flippantDithionite Scramblase Assay Analysis
fliprFlexible Inference via Permutations in R
flipscoresRobust Score Testing in GLMs, by Sign-Flip Contributions
FLLatFused Lasso Latent Feature Model
float32-Bit Floats
flobrConvert Files to and from Binary Objects (BLOBs)
flockProcess Synchronization Using File Locks
floodStatistical Methods for the (Regional) Analysis of Flood Frequency
floraTools for Interacting with the Brazilian Flora 2020
flowView and Browse Code Using Flow Diagrams
flowerTools for characterizing flowering traits
flowfieldForecasts future values of a univariate time series
flowrStreamlining Design and Deployment of Complex Workflows
FlowRegEnvCostThe Environmental Costs of Flow Regulation
FlowScreenDaily Streamflow Trend and Change Point Screening
FLRFuzzy Logic Rule Classifier
flsaPath Algorithm for the General Fused Lasso Signal Approximator
FLSSSMining Rigs for Specialized Subset Sum, Multi-Subset Sum, Multidimensional Subset Sum, Multidimensional Knapsack, Generalized Assignment Problems
FluMoDLInfluenza-Attributable Mortality with Distributed-Lag Models
fluoSurvEstimate Insect Survival from Fluorescence Data
fluxFlux rate calculation from dynamic closed chamber measurements
fluxwebEstimate Energy Fluxes in Food Webs
flyingSimulation of Bird Flight Range
FlyingRSimulation of Bird Flight Range
fmaData Sets from "Forecasting: Methods and Applications" by Makridakis, Wheelwright & Hyndman (1998)
FMAdistFrequentist Model Averaging Distribution
fmbasicsFinancial Market Building Blocks
FMCFactorial Experiments with Minimum Level Changes
FMCCSDEfficient Estimation of Clustered Current Status Data
fmcmcA friendly MCMC framework
fmdatesFinancial Market Date Calculations
FMEA Flexible Modelling Environment for Inverse Modelling, Sensitivity, Identifiability and Monte Carlo Analysis
fmerPackTools of Heterogeneity Pursuit via Finite Mixture Effects Model
fmfFast Class Noise Detector with Multi-Factor-Based Learning
FMMRhythmic Patterns Modeling by FMM Models
FMPFiltered Monotonic Polynomial IRT Models
fmpcloudrR Access to the 'FMP Cloud' and 'Financial Modeling Prep' API
FMradioFactor Modeling for Radiomics Data
fmriAnalysis of fMRI Experiments
fmriqaFunctional MRI Quality Assurance Routines
fMRIscrubScrubbing and Other Data Cleaning Routines for fMRI
fmsbFunctions for Medical Statistics Book with some Demographic Data
FMsmsnRegRegression Models with Finite Mixtures of Skew Heavy-Tailed Errors
FMStableFinite Moment Stable Distributions
fmtrEasily Apply Formats to Data
fMultivarRmetrics - Analysing and Modeling Multivariate Financial Return Distributions
FNNFast Nearest Neighbor Search Algorithms and Applications
fNonlinearRmetrics - Nonlinear and Chaotic Time Series Modelling
FOCIFeature Ordering by Conditional Independence
focusedMDSFocused, Interactive Multidimensional Scaling
foghornSummarize CRAN Check Results in the Terminal
foieGrasFit Continuous-Time State-Space and Latent Variable Models for Quality Control of Argos Satellite (and Other) Telemetry Data and for Estimating Movement Behaviour
folderfunCreates and Manages Folder Functions for Portable Large-Scale R Analysis
folioDatasets for Teaching Archaeology and Paleontology
fontawesomeEasily Work with 'Font Awesome' Icons
fontBitstreamVeraFonts with 'Bitstream Vera Fonts' License
fontcmComputer Modern font for use with extrafont package
fontHindAdditional 'ggplot2' Themes Using 'Hind' Fonts
fontLiberationLiberation Fonts
fontMPlusAdditional 'ggplot2' Themes Using 'M+' Fonts
fontquiverSet of Installed Fonts
foodingraphFood Network Inference and Visualization
foodwebvisualisation and analysis of food web networks
foolboxFunction Manipulation Toolbox
footballpenaltiesBLPenalties in the German Men's Football Bundesliga
footprintCalculate Air Travel Emissions
fOptionsRmetrics - Pricing and Evaluating Basic Options
foqatField Observation Quick Analysis Toolkit
foramsForaminifera and Community Ecology Analyses
forcatsTools for Working with Categorical Variables (Factors)
foreachProvides Foreach Looping Construct
ForeCAForecastable Component Analysis
forecastForecasting Functions for Time Series and Linear Models
ForecastCombForecast Combination Methods
ForecastCombinationsForecast Combinations
forecastHybridConvenient Functions for Ensemble Time Series Forecasts
forecastMLTime Series Forecasting with Machine Learning Methods
forecastSNSTSForecasting for Stationary and Non-Stationary Time Series
ForecastTBTest Bench for the Comparison of Forecast Methods
FoRecoPoint Forecast Reconciliation
forecThetaForecasting Time Series by Theta Models
foreignRead Data Stored by 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka', 'dBase', ...
forensicStatistical Methods in Forensic Genetics
forensimStatistical tools for the interpretation of forensic DNA mixtures
foreSIGHTSystems Insights from Generation of Hydroclimatic Timeseries
forestControlApproximate False Positive Rate Control in Selection Frequency for Random Forest
ForestDiscForest Discretization
forestecologyFitting and Assessing Neighborhood Models of the Effect of Interspecific Competition on the Growth of Trees
forestErrorA Unified Framework for Random Forest Prediction Error Estimation
ForestFitStatistical Modelling for Plant Size Distributions
ForestGapRTropical Forest Canopy Gaps Analysis
forestHESForest Health Evaluation System at the Forest Stand Level in China
forestinventoryDesign-Based Global and Small-Area Estimations for Multiphase Forest Inventories
forestmangrForest Mensuration and Management
forestmodelForest Plots from Regression Models
forestplotAdvanced Forest Plot Using 'grid' Graphics
forestrEcosystem and Canopy Structural Complexity Metrics from LiDAR
forestRKImplements the Forest-R.K. Algorithm for Classification Problems
forestryReshape Data Tree
ForestToolsAnalyzing Remotely Sensed Forest Data
foretellProjecting Customer Retention Based on Fader and Hardie Probability Models
forgeCasting Values into Shape
forImageForaminiferal Image Analysis and Test Measurement
ForImpImputation of Missing Values Through a Forward Imputation Algorithm
ForITFunctions from the 2nd Italian Forest Inventory (INFC)
formatRFormat R Code Automatically
formattableCreate 'Formattable' Data Structures
FormulaExtended Model Formulas
formula.toolsProgrammatic Utilities for Manipulating Formulas, Expressions, Calls, Assignments and Other R Objects
formulaicDynamic Generation and Quality Checks of Formula Objects
formulopsMathematical Operations on R Formula
forploFlexible Forest Plots
forrelForensic Pedigree Analysis and Relatedness Inference
FORTLSAutomatic Processing of TLS Point Cloud Data for Forestry Purposes
fortunesR Fortunes
forwardRobust Analysis using Forward Search
forwardsData from Surveys Conducted by Forwards
ForwardSearchForward Search using asymptotic theory
fossilPalaeoecological and Palaeogeographical Analysis Tools
FossilSimSimulation of Fossil and Taxonomy Data
fosterForest Structure Extrapolation with R
fotoFourier Transform Textural Ordination
FourgametePFourGamete Test
fourierinComputes Numeric Fourier Integrals
fourPNOBayesian 4 Parameter Item Response Model
FourScoresA Game for Human vs. Human or Human vs. AI
fpaSpatio-Temporal Fixation Pattern Analysis
fpcFlexible Procedures for Clustering
fpcaRestricted MLE for Functional Principal Components Analysis
FPCA2DTwo Dimensional Functional Principal Component Analysis
FPCA3DThree Dimensional Functional Component Analysis
fpcbPredictive Confidence Bands for Functional Time Series Forecasting
fpCompareReliable Comparison of Floating Point Numbers
FPDclusteringPD-Clustering and Factor PD-Clustering
fpeekCheck Text Files Content at a Glance
fpestEstimating Finite Population Total
fplotAutomatic Distribution Graphs Using Formulas
fplyrApply Functions to Blocks of Files
fpopSegmentation using Optimal Partitioning and Function Pruning
fPortfolioRmetrics - Portfolio Selection and Optimization
fpowComputing the noncentrality parameter of the noncentral F distribution
fppData for "Forecasting: principles and practice"
fpp2Data for "Forecasting: Principles and Practice" (2nd Edition)
fpp3Data for "Forecasting: Principles and Practice" (3rd Edition)
fptdApproxApproximation of First-Passage-Time Densities for Diffusion Processes
FPVTesting Hypotheses via Fuzzy P-Value in Fuzzy Environment
fracdiffFractionally Differenced ARIMA aka ARFIMA(P,d,q) Models
fracdistNumerical CDFs for Fractional Unit Root and Cointegration Tests
FracKrigingRSpatial Multivariate Data Modeling
fracprolifFraction Proliferation via a Quiescent Growth Model
fractaldimEstimation of Fractal Dimensions
FractalParameterEstimationSimulation and Parameter Estimation of Randomized Sierpinski Carpets using the p-p-p-q-Model
fractDEstimation of Fractal Dimension of a Black Area in 2D and 3D (Slices) Images
FRACTIONNumeric number into fraction
fractionalVulgar Fractions in R
fractureConvert Decimals to Fractions
fragilityAssessing and Visualizing Fragility of Clinical Results with Binary Outcomes
FragmanFragment Analysis in R
frailtyEMFitting Frailty Models with the EM Algorithm
frailtyHLFrailty Models via Hierarchical Likelihood
frailtypackShared, Joint (Generalized) Frailty Models; Surrogate Endpoints
frailtySurvGeneral Semiparametric Shared Frailty Model
frairTools for Functional Response Analysis
frambgrowthSimulation of the Growth of Framboidal and Sunflower Pyrite
framecleanerClean Data Frames
Frames2Estimation in Dual Frame Surveys
francDetect the Language of Text
FRAPOFinancial Risk Modelling and Portfolio Optimisation with R
frapplotAutomatic Data Processing and Visualization for FRAP
frbsFuzzy Rule-Based Systems for Classification and Regression Tasks
FRCCFast Regularized Canonical Correlation Analysis
frechetStatistical Analysis for Random Objects and Non-Euclidean Data
fredrAn R Client for the 'FRED' API
freealgThe Free Algebra
freedomDemonstration of Disease Freedom (DDF)
freegroupThe Free Group
FreeSortRFree Sorting Data Analysis
freesurferWrapper Functions for 'Freesurfer'
freesurferformatsRead and Write 'FreeSurfer' Neuroimaging File Formats
FREEtreeTree Method for High Dimensional Longitudinal Data
fRegressionRmetrics - Regression Based Decision and Prediction
frenchCurveGenerate Open or Closed Interpolating Curves
frenchdataDownload Data Sets from Kenneth's French Finance Data Library Site
FREQFREQ: Estimate population size from capture frequencies
freqdistFrequency Distribution
freqdomFrequency Domain Based Analysis: Dynamic PCA
freqdom.fdaFunctional Time Series: Dynamic Functional Principal Components
freqparcoordNovel Methods for Parallel Coordinates
FreqProfFrequency Profiles Computing and Plotting
freqtablesMake Quick Descriptive Tables for Categorical Variables
frequencyEasy Frequency Tables
frequencyConnectednessSpectral Decomposition of Connectedness Measures
frequentdirectionsImplementation of Frequent-Directions Algorithm for Efficient Matrix Sketching
frequentistSSDScreened Selection Design with Survival Endpoints
FRESA.CADFeature Selection Algorithms for Computer Aided Diagnosis
freshCreate Custom 'Bootstrap' Themes to Use in 'Shiny'
FrF2Fractional Factorial Designs with 2-Level Factors
FrF2.catlg128Catalogues of resolution IV 128 run 2-level fractional factorials up to 33 factors that do have 5-letter words
friendsThe Entire Transcript from Friends in Tidy Format
fritoolsUtilities for the Forest Research Institute of the State Baden-Wuerttemberg
FRKFixed Rank Kriging
fRLRFit Repeated Linear Regressions
frmRegression Analysis of Fractional Responses
frmhetRegression Analysis of Fractional Responses Under Unobserved Heterogeneity
frmpdRegression Analysis of Panel Fractional Responses
frmqaThe Generalized Hyperbolic Distribution, Related Distributions and Their Applications in Finance
fromoFast Robust Moments
frontierStochastic Frontier Analysis
frontilesPartial Frontier Efficiency Analysis
frostPrediction of Minimum Temperature for Frost Forecasting in Agriculture
frostrR API to MET Norway's 'Frost' API
frscoreFunctions for Calculating Fit-Robustness of CNA-Solutions
fruclimadaptEvaluation Tools for Assessing Climate Adaptation of Fruit Tree Species
fsCross-Platform File System Operations Based on 'libuv'
FSASimple Fisheries Stock Assessment Methods
FSAdataData to Support Fish Stock Assessment ('FSA') Package
fsbrainManaging and Visualizing Brain Surface Data
fscaretAutomated Feature Selection from 'caret'
FSDAMForward Stepwise Deep Autoencoder-Based Monotone NLDR
fsdaRRobust Data Analysis Through Monitoring and Dynamic Visualization
FSelectorSelecting Attributes
FSelectorRcpp'Rcpp' Implementation of 'FSelector' Entropy-Based Feature Selection Algorithms with a Sparse Matrix Support
fsiaImport and Analysis of OMR Data from FormScanner
FSinRFeature Selection
FSInteractFast Searches for Interactions
FSK2RAn Interface Between the 'FSK-ML' Standard and 'R'
fslrWrapper Functions for 'FSL' ('FMRIB' Software Library) from Functional MRI of the Brain ('FMRIB')
FSMFinite Selection Model
fsMTSFeature Selection for Multivariate Time Series
FSMUMIImputation of Time Series Based on Fuzzy Logic
fsnRosenthal's Fail Safe Number and Related Functions
fsoFuzzy Set Ordination
fspeEstimating the Number of Factors in EFA with Out-of-Sample Prediction Errors
fsrHandling Fuzzy Spatial Data
fSRMSocial Relations Analyses with Roles ("Family SRM")
fssemRFused Sparse Structural Equation Models to Jointly Infer Gene Regulatory Network
FSSFGenerate Fully-Sequential Space-Filling Designs Inside a Unit Hypercube
fstLightning Fast Serialization of Data Frames
FstabilityCalculate Feature Stability
fstcoreR Bindings to the 'Fstlib' Library
fsthetFst-Heterozygosity Smoothed Quantiles
FSTpackageUnified Sequence-Based Association Tests Allowing for Multiple Functional Annotation Scores
ftDKA Wrapper for the API of the Danish Parliament
ftExtraExtensions for 'Flextable'
ftnonparFeatures and Strings for Nonparametric Regression
fTradingRmetrics - Trading and Rebalancing Financial Instruments
ftrCOOLFeature Extraction from Biological Sequences
ftsR Interface to 'tslib' (a Time Series Library in C++)
ftsaFunctional Time Series Analysis
ftsspecSpectral Density Estimation and Comparison for Functional Time Series
fuelFramework for Unified Estimation in Lognormal Models
fueleconomyEPA Fuel Economy Data
fugeRFUzzy GEnetic, a machine learning algorithm to construct prediction model based on fuzzy logic
fugueSensitivity Analysis Optimized for Matched Sets of Varied Sizes
fullfactFull Factorial Breeding Analysis
fullROCPlot Full ROC Curves using Eyewitness Lineup Data
funUse R for Fun
func2visClean and Visualize Over Expression Results from 'ConsensusPathDB'
FunCCFunctional Cheng and Church Bi-Clustering
funchartsFunctional Control Charts
funchirConvenience Functions by Michael Chirico
FunChisqModel-Free Functional Chi-Squared and Exact Tests
FunClusterFunctional Profiling of Microarray Expression Data
FuncMapHive Plots of R Package Function Calls
FuncNNFunctional Neural Networks
functClustFunctional Clustering of Redundant Components of a System
functionalCurry, Compose, and other higher-order functions
functiondependsFind Functions and their Dependencies
funDataAn S4 Class for Functional Data
fundiversityEasy Computation of Alpha Functional Diversity Indices
funFEMClustering in the Discriminative Functional Subspace
fungiblePsychometric Functions from the Waller Lab
funGpGaussian Process Models for Scalar and Functional Inputs
funHDDCUnivariate and Multivariate Model-Based Clustering in Group-Specific Functional Subspaces
funiqueA Faster Unique Function
fUnitRootsRmetrics - Modelling Trends and Unit Roots
funLBMModel-Based Co-Clustering of Functional Data
funModelingExploratory Data Analysis and Data Preparation Tool-Box
funneljoinTime-Based Joins to Analyze Sequences of Events
FunnelPlotRFunnel Plots for Comparing Institutional Performance
funnelRFunnel Plots for Proportion Data
funprogFunctional Programming
funrSimple Utility Providing Terminal Access to all R Functions
funrarFunctional Rarity Indices Computation
funregFunctional Regression for Irregularly Timed Data
FUNTAFunctional Tangential Angle Pseudo-Depth
funtimesFunctions for Time Series Analysis
FunWithNumbersFun with Fractions and Number Sequences
furnitureFurniture for Quantitative Scientists
furrrApply Mapping Functions in Parallel using Futures
fusenBuild a Package from Rmarkdown File
fuserFused Lasso for High-Dimensional Regression over Groups
fusionchartsREmbedding 'FusionCharts Javascript' Library in R
fusionclustClustering and Feature Screening using L1 Fusion Penalty
FusionLearnFusion Learning
futile.loggerA Logging Utility for R
futile.optionsFutile Options Management
futile.paradigmA framework for working in a functional programming paradigm in R
futilityInterim Analysis of Operational Futility in Randomized Trials with Time-to-Event Endpoints and Fixed Follow-Up
futureUnified Parallel and Distributed Processing in R for Everyone
future.applyApply Function to Elements in Parallel using Futures
future.batchtoolsA Future API for Parallel and Distributed Processing using 'batchtools'
future.callrA Future API for Parallel Processing using 'callr'
future.testsTest Suite for 'Future API' Backends
futureheatwavesFind, Characterize, and Explore Extreme Events in Climate Projections
fuzzrFuzz-Test R Functions
Fuzzy.p.valueComputing Fuzzy p-Value
FuzzyAHP(Fuzzy) AHP Calculation
fuzzyFDRExact calculation of fuzzy decision rules for multiple testing
fuzzyforestFuzzy Forests
fuzzyjoinJoin Tables Together on Inexact Matching
FuzzyLPFuzzy Linear Programming
FuzzyMCDMMulti-Criteria Decision Making Methods for Fuzzy Data
FuzzyNumbersTools to Deal with Fuzzy Numbers
FuzzyNumbers.Ext.2Apply Two Fuzzy Numbers on a Monotone Function
FuzzyQFuzzy Quantification of Common and Rare Species
FuzzyRFuzzy Logic Toolkit for R
fuzzyRankTestsFuzzy Rank Tests and Confidence Intervals
fuzzyregFuzzy Linear Regression
FuzzyResamplingResampling Methods for Triangular and Trapezoidal Fuzzy Numbers
fuzzySimFuzzy Similarity in Species Distributions
FuzzyStatProbFuzzy Stationary Probabilities from a Sequence of Observations of an Unknown Markov Chain
FuzzyStatTraStatistical Methods for Trapezoidal Fuzzy Numbers
FuzzySTsFuzzy Statistical Tools
FuzzyToolkitUoNType 1 Fuzzy Logic Toolkit
fuzzywuzzyRFuzzy String Matching
FWDselectSelecting Variables in Regression Models
fwi.fbpFire Weather Index System and Fire Behaviour Prediction System Calculations
fwildclusterbootFast Wild Cluster Bootstrap Inference for Linear Regression Models
fwsimFisher-Wright Population Simulation
fxregimeExchange Rate Regime Analysis
fxTWAPLSAn Improved Version of WA-PLS
fyUtilities for Financial Years
g.dataDelayed-Data Packages
G1DBNA package performing Dynamic Bayesian Network inference
g2fFind and Fill Gaps in Metabolic Networks
G2SdGrain-Size Statistics and Description of Sediment
g3vizInteractively Visualize Genetic Mutation Data using a Lollipop-Diagram
GAGenetic Algorithms
GAabbreviateAbbreviating Items Measures using Genetic Algorithms
GABiFramework for Generalized Subspace Pattern Mining
GACFFGenetic Similarity in User-Based Collaborative Filtering
GADGAD: Analysis of variance from general principles
GADAGA Genetic Algorithm for Learning Directed Acyclic Graphs
gadget2Gadget is the Globally-Applicable Area Disaggregated General Ecosystem Toolbox
GaDiFPTFirst Passage Time Simulation for Gaussian Diffusion Processes
GADMToolsEasy Use of 'GADM' Maps
gafitGenetic Algorithm for Curve Fitting
gaiahGenetic and Isotopic Assignment Accounting for Habitat Suitability
gainMLMachine Learning-Based Analysis of Potential Power Gain from Passive Device Installation on Wind Turbine Generators
gainsLift (Gains) Tables and Charts
GAIPEGraphical Extension with Accuracy in Parameter Estimation (GAIPE)
galahAtlas of Living Australia (ALA) Data and Resources in R
galigorCollection of Packages for Internet Marketing
GALLOGenomic Annotation in Livestock for Positional Candidate LOci
galtsGenetic Algorithms and C-Steps Based LTS (Least Trimmed Squares) Estimation
galvanizerInterface to Galvanize 'Highbond' Internal Audit Software
gamGeneralized Additive Models
gamairData for 'GAMs: An Introduction with R'
gambinFit the Gambin Model to Species Abundance Distributions
gamblers.ruin.gameplayOne-Dimensional Random Walks Through Simulation of the Gambler's Ruin Problem
gamboostLSSBoosting Methods for 'GAMLSS'
gamboostMSMEstimating multistate models using gamboost()
gamclassFunctions and Data for a Course on Modern Regression and Classification
gamCopulaGeneralized Additive Models for Bivariate Conditional Dependence Structures and Vine Copulas
GAMensApplies GAMbag, GAMrsm and GAMens Ensemble Classifiers for Binary Classification
gameofthronesPalettes Inspired in the TV Show "Game of Thrones"
gamesStatistical Estimation of Game-Theoretic Models
gamesGAGenetic Algorithm for Sequential Symmetric Games
GameTheoryCooperative Game Theory
GameTheoryAllocationTools for Calculating Allocations in Game Theory
gamlrGamma Lasso Regression
gamlssGeneralised Additive Models for Location Scale and Shape
gamlss.addExtra Additive Terms for Generalized Additive Models for Location Scale and Shape
gamlss.censFitting an Interval Response Variable Using ‘gamlss.family’ Distributions
gamlss.countKinfGenerating and Fitting K-Inflated 'discrete gamlss.family' Distributions
gamlss.dataData for Generalised Additive Models for Location Scale and Shape
gamlss.demoDemos for GAMLSS
gamlss.distDistributions for Generalized Additive Models for Location Scale and Shape
gamlss.foreachParallel Computations for Distributional Regression
gamlss.infFitting Mixed (Inflated and Adjusted) Distributions
gamlss.lassoExtra Lasso-Type Additive Terms for GAMLSS
gamlss.mxFitting Mixture Distributions with GAMLSS
gamlss.nlFitting non linear parametric GAMLSS models
gamlss.spatialSpatial Terms in Generalized Additive Models for Location Scale and Shape Models
gamlss.trGenerating and Fitting Truncated ‘gamlss.family’ Distributions
gamlssbssnBimodal Skew Symmetric Normal Distribution
gamm4Generalized Additive Mixed Models using 'mgcv' and 'lme4'
gamm4.testComparing Nonlinear Curves and Surface Estimations by Semiparametric Methods
gammaDose Rate Estimation from in-Situ Gamma-Ray Spectrometry Measurements
GammaregClassic Gamma Regression: Joint Modeling of Mean and Shape Parameters
gammSliceGeneralized Additive Mixed Model Analysis via Slice Sampling
gamregRobust and Sparse Regression via Gamma-Divergence
gamRRCalculate the RR for the GAM
gamselFit Regularization Path for Generalized Additive Models
ganalyticsInteract with 'Google Analytics'
ganGenerativeDataGenerate Generative Data for a Data Source
GANPAGene Association Network-Based Pathway Analysis (GANPA)
GANPAdataThe GANPA Datasets Package
gapGenetic Analysis Package
gap.datasetsDatasets for 'gap'
GapAnalysisConservation Indicators using Spatial Information
GAparsimonySearching Parsimony Models with Genetic Algorithms
gapclosingEstimate Gaps Under an Intervention
gapfillFill Missing Values in Satellite Data
gapmapDrawing Gapped Cluster Heatmap with 'ggplot2'
gapminderData from Gapminder
GARCHItoClass of GARCH-Ito Models
garchmodelsThe 'Tidymodels' Extension for GARCH Models
GARCHSKEstimating a GARCHSK Model and GJRSK Model
garchxFlexible and Robust GARCH-X Modelling
GARCOMGene and Region Counting of Mutations ("GARCOM")
gargleUtilities for Working with Google APIs
gargoyleAn Event-Based Mechanism for 'Shiny'
garmaFitting and Forecasting Gegenbauer ARMA Time Series Models
garrayGeneralized Array Arithmetic for Ragged Arrays with Named Margins
GASGeneralized Autoregressive Score Models
gaselectGenetic Algorithm (GA) for Variable Selection from High-Dimensional Data
gasfluxesGreenhouse Gas Flux Calculation from Chamber Measurements
GaSPTrain and Apply a Gaussian Stochastic Process Model
gasperGraph Signal Processing
gastemptAnalyzing Gastric Emptying from MRI or 'Scintigraphy'
gastonGenetic Data Handling (QC, GRM, LD, PCA) & Linear Mixed Models
gatepointsEasily Gate or Select Points on a Scatter Plot
gateRFlow/Mass Cytometry Gating via Spatial Kernel Density Estimation
GauProGaussian Process Fitting
gauseRLotka-Volterra Models for Gause's 'Struggle for Existence'
gausscovThe Gaussian Covariate Method for Variable Selection
gaussDiffDifference measures for multivariate Gaussian probability density functions
gaussfactsThe Greatest Mathematician Since Antiquity
GaussianHMM1dInference, Goodness-of-Fit and Forecast for Univariate Gaussian Hidden Markov Models
gaussplotRFit, Predict and Plot 2D Gaussians
gaussquadCollection of functions for Gaussian quadrature
GaussSuppressionTabular Data Suppression using Gaussian Elimination
gawdisMulti-Trait Dissimilarity with more Uniform Contributions
gazepathParse Eye-Tracking Data into Fixations
gbGeneralize Lambda Distribution and Generalized Bootstrapping
GB2Generalized Beta Distribution of the Second Kind: Properties, Likelihood, Estimation
GB2groupEstimation of the Generalised Beta Distribution of the Second Kind from Grouped Data
gbetaGeneralized Beta and Beta Prime Distributions
gbfsInterface with Live Bikeshare Data
GBJGeneralized Berk-Jones Test for Set-Based Inference in Genetic Association Studies
gbmGeneralized Boosted Regression Models
gbm.autoAutomated Boosted Regression Tree Modelling and Mapping Suite
gbm2sasConvert GBM Object Trees to SAS Code
gbmtGroup-Based Multivariate Trajectory Modeling
gbpA Bin Packing Problem Solver
gbRdUtilities for processing Rd objects and files
gbs2ploidyInference of Ploidy from (Genotyping-by-Sequencing) GBS Data
gbtsHyperparameter Search for Gradient Boosted Trees
gbutilsSimulation of Real and Complex Numbers and Small Programming Utilities
GCAI.biasGuided Correction Approach for Inherited bias (GCAI.bias)
GCalciumA Data Manipulation and Analysis Package for Calcium Indicator Data
GCalignRSimple Peak Alignment for Gas-Chromatography Data
gCatGraph-based two-sample tests for categorical data
gcbd'GPU'/CPU Benchmarking in Debian-Based Systems
GCDGlobal Charcoal Database
gcdnetLASSO and Elastic Net (Adaptive) Penalized Least Squares, Logistic Regression, HHSVM, Squared Hinge SVM and Expectile Regression using a Fast GCD Algorithm
gceriskGeneralized Competing Event Model
gciteGoogle Citation Parser
gcKrigAnalysis of Geostatistical Count Data using Gaussian Copulas
gclmGraphical Continuous Lyapunov Models
gclusClustering Graphics
gcmrGaussian Copula Marginal Regression
gconsensusConsensus Value Constructor
gcookbookData for "R Graphics Cookbook"
GCPBayesBayesian Meta-Analysis of Pleiotropic Effects Using Group Structure
GCPMGeneralized Credit Portfolio Model
GCSMImplements Generic Composite Similarity Measure
gcTensorGeneralized Coupled Tensor Factorization
GDGeographical Detectors for Assessing Spatial Factors
GDAdataDatasets for the Book Graphical Data Analysis with R
gdalcubesEarth Observation Data Cubes from Satellite Image Collections
gdalUtilitiesWrappers for 'GDAL' Utilities Executables
gdalUtilsWrappers for the Geospatial Data Abstraction Library (GDAL) Utilities
gdataVarious R Programming Tools for Data Manipulation
GDAtoolsA Toolbox for Geometric Data Analysis and More
gdeGBIF Dataset Explorer
gDefragGraph-Based Landscape De-Fragmentation
GDELTtoolsDownload, Slice, and Normalize GDELT V1 Data
gdiffGraphical Difference Testing
GDINAThe Generalized DINA Model Framework
gdistanceDistances and Routes on Geographical Grids
gdmGeneralized Dissimilarity Modeling
gdnsTools to Work with Google's 'DNS'-over-'HTTPS' ('DoH') API
gdpcGeneralized Dynamic Principal Components
GDPucEasily Convert GDP Data
gdsDescriptive Statistics of Grouped Data
gdtoolsUtilities for Graphical Rendering
gdxdtIO for GAMS GDX Files using 'data.table'
GEGeneral Equilibrium Modeling
gearGeostatistical Analysis in R
geckorR Client for the 'CoinGecko' API
GeDSGeometrically Designed Spline Regression
geeGeneralized Estimation Equation Solver
GEEaSPUAdaptive Association Tests for Multiple Phenotypes using Generalized Estimating Equations (GEE)
geeCRTBias-Corrected GEE for Cluster Randomized Trials
geecureMarginal Proportional Hazards Mixture Cure Models with Generalized Estimating Equations
geeMSolve Generalized Estimating Equations
GEEmediateMediation Analysis for Generalized Linear Models Using the Difference Method
geepackGeneralized Estimating Equation Package
geesmvModified Variance Estimators for Generalized Estimating Equations
geexAn API for M-Estimation
geigenCalculate Generalized Eigenvalues, the Generalized Schur Decomposition and the Generalized Singular Value Decomposition of a Matrix Pair with Lapack
geigerAnalysis of Evolutionary Diversification
GEintMisspecified Models for Gene-Environment Interaction
GEInterRobust Gene-Environment Interaction Analysis
gelnetGeneralized Elastic Nets
gemlogFile Conversion for 'Gem Infrasound Logger'
gemma2GEMMA Multivariate Linear Mixed Model
gemsGeneralized Multistate Simulation Model
gemtcNetwork Meta-Analysis Using Bayesian Methods
gen2stageGeneralized Two-Stage Designs for Phase II Single-Arm Studies
gen3sisGeneral Engine for Eco-Evolutionary Simulations
gen5helperProcessing 'Gen5' 2.06 Exported Data
genalgR Based Genetic Algorithm
GenAlgoClasses and Methods to Use Genetic Algorithms for Feature Selection
genasisGlobal ENvironmental ASsessment Information System (GENASIS) computational tools
genBaRcodeAnalysis and Visualization Tools for Genetic Barcode Data
GenBinomAppsClopper-Pearson Confidence Interval and Generalized Binomial Distribution
gencorGenerate Customized Correlation Matrices
gencveGeneral Cross Validation Engine
gendataGenerate and Modify Synthetic Datasets
genderPredict Gender from Names Using Historical Data
genderBRPredict Gender from Brazilian First Names
GenderInferThis is a Collection of Functions to Analyse Gender Differences
gendistGenerated Probability Distribution Models
GENEAclassifySegmentation and Classification of Accelerometer Data
GENEAreadPackage for Reading Binary Files
GENEAsphereVisualisation of Raw or Segmented Accelerometer Data
GeneClusterNetGene Expression Clustering and Gene Network
GeneCycleIdentification of Periodically Expressed Genes
geneExpressionFromGEORetrieves Gene Expression Dataset and Gene Symbols from GEO Code
GeneFPackage for Generalized F-statistics
geneHummusA Pipeline to Define Gene Families in Legumes and Beyond
geneListPieProfiling a gene list into GOslim or KEGG function pie
genemodelGene Model Plotting in R
GeneNetModeling and Inferring Gene Networks
geneNetBPBelief Propagation in Genotype-Phenotype Networks
genepiGenetic Epidemiology Design and Inference
genepopPopulation Genetic Data Analysis Using Genepop
generalCorrGeneralized Correlations, Causal Paths and Portfolio Selection
generalhoslemGoodness of Fit Tests for Logistic Regression Models
GeneralisedCovarianceMeasureTest for Conditional Independence Based on the Generalized Covariance Measure (GCM)
GeneralizedHyperbolicThe Generalized Hyperbolic Distribution
GeneralizedUmatrixCredible Visualization for Two-Dimensional Projections of Data
GeneralOaxacaBlinder-Oaxaca Decomposition for Generalized Linear Model
generatorGenerate Data Containing Fake Personally Identifiable Information
GenericMLGeneric Machine Learning Inference
genericsCommon S3 Generics not Provided by Base R Methods Related to Model Fitting
generoEstimate Gender from Names in Spanish and Portuguese
geneSignatureFinderA Gene-signatures finder tools
GenEstGeneralized Mortality Estimator
genesysrGenesys PGR Client
geneticaeStatistical Tools for the Analysis of Multi Environment Agronomic Trials
geneticsPopulation Genetics
GeneticSubsetterIdentify Favorable Subsets of Germplasm Collections
GeNetItSpatial Graph-Theoretic Genetic Gravity Modelling
GenForImpThe Forward Imputation: A Sequential Distance-Based Approach for Imputing Missing Data
GenHMM1dGoodness-of-Fit for Univariate Hidden Markov Models
genieFast, Robust, and Outlier Resistant Hierarchical Clustering
genieclustThe Genie++ Hierarchical Clustering Algorithm with Noise Points Detection
genioGenetics Input/Output Functions
geniusEasily Access Song Lyrics from Genius.com
geniusrTools for Working with the 'Genius' API
GenKernFunctions for generating and manipulating binned kernel density estimates
genlassoPath Algorithm for Generalized Lasso Problems
GENLIBGenealogical Data Analysis
genlogisGeneralized Logistic Distribution
GenMarkovMultivariate Markov Chains
GENMETAImplements Generalized Meta-Analysis Using Iterated Reweighted Least Squares Algorithm
geno2proteoFinding the DNA and Protein Sequences of Any Genomic or Proteomic Loci
genoddsGeneralized Odds Ratios
genogeographerMethods for Analysing Forensic Ancestry Informative Markers
GenomeAdaptDetecting Signatures of Local Adaptation Based on Ancestry Trajectories
GenomeAdmixRSimulate Admixture of Genomes
genomeplot'Plot genome wide values for all chromosomes'
genomic.autocorrModels Dealing with Spatial Dependency in Genomic Data
GenomicMatingEfficient Breeding by Genomic Mating
genomicperCircular Genomic Permutation using Genome Wide Association p-Values
GenomicToolsCollection of Tools for Genomic Data Analysis
GenomicTools.fileHandlerFile Handlers for Genomic Data Analysis
genoPlotRPlot Publication-Grade Gene and Genome Maps
GenOrdSimulation of Discrete Random Variables with Given Correlation Matrix and Marginal Distributions
GenoScanA Genome-Wide Scan Statistic Framework for Whole-Genome Sequence Data Analysis
genotypeRSNP Genotype Marker Design and Analysis
genpathmoxGeneralized Pathmox Approach Segmentation Tree Analysis
genpwrPower Calculations Under Genetic Model Misspecification
genridgeGeneralized Ridge Trace Plots for Ridge Regression
GenSAGeneralized Simulated Annealing
genscoreGeneralized Score Matching Estimators
genSEIRPredict Epidemic Curves with Generalized SEIR Modeling
gensetGenerates Data Sets for Class Demonstrations
gensphereGeneralized Spherical Distributions
genstabResampling Based Yield Stability Analyses
genSurvGenerating Multi-State Survival Data
gensvmA Generalized Multiclass Support Vector Machine
GenTagGenerate Color Tag Sequences
genTSR Shiny App for Creating Simplified Trial Summary (TS) Domain
GenWinSpline Based Window Boundaries for Genomic Analyses
geoBayesAnalysis of Geostatistical Data using Bayes and Empirical Bayes Methods
GeoBoxplotGeographic Box Plot
geobrDownload Official Spatial Data Sets of Brazil
geocacheRTools for Geocaching
geocmeansImplementing Methods for Spatial Fuzzy Unsupervised Classification
geodaDataSpatial Analysis Datasets for Teaching
geodataDownload Geographic Data
GeoDEA geometrical Approach to Differential expression and gene-set enrichment
GeodesiCLGeometric Geodesy Functions
geodetectorStratified Heterogeneity Measure, Dominant Driving Force Detection, Interaction Relationship Investigation
geodimensionDefinition of Geographic Dimensions
geodistFast, Dependency-Free Geodesic Distance Calculations
geodivMethods for Calculating Gradient Surface Metrics
geodrawrMaking Geospatial Objects
GeodRegrGeodesic Regression
geoelectrics3D-Visualization of Geoelectric Resistivity Measurement Profiles
geofabrikDownloading Open Street Map Data
geofacet'ggplot2' Faceting Utilities for Geographical Data
geofdSpatial Prediction for Function Value Data
geofiAccess Finnish Geospatial Data
GeoFISSpatial Data Processing for Decision Making
geoFKFKriging Method for Spatial Functional Data
geoFourierFDAOrdinary Functional Kriging Using Fourier Smoothing and Gaussian Quadrature
geoGAMSelect Sparse Geoadditive Models for Spatial Prediction
geogridTurn Geospatial Polygons into Regular or Hexagonal Grids
geohashToolsTools for Working with Geohashes
geojsonClasses for 'GeoJSON'
geojsonioConvert Data from and to 'GeoJSON' or 'TopoJSON'
geojsonlintTools for Validating 'GeoJSON'
geojsonRA GeoJson Processing Toolkit
geojsonsfGeoJSON to Simple Feature Converter
geoknifeWeb-Processing of Large Gridded Datasets
geomanderGeographic Tools for Studying Gerrymandering
GEOmapTopographic and Geologic Mapping
geomapdataData for topographic and Geologic Mapping
GeomComb(Geometric) Forecast Combination Methods
geomedbFunctions for Fetching 'GeOMe-db' Data
geomergeGeospatial Data Integration
geometaTools for Reading and Writing ISO/OGC Geographic Metadata
geometrGenerate and Modify Interoperable Geometric Shapes
geometriesConvert Between R Objects and Geometric Structures
geometryMesh Generation and Surface Tessellation
GeoMongoGeospatial Queries Using 'PyMongo'
geomorphGeometric Morphometric Analyses of 2D/3D Landmark Data
geonamesInterface to the "Geonames" Spatial Query Web Service
geonapi'GeoNetwork' API R Interface
geonetIntensity Estimation on Geometric Networks with Penalized Splines
geonetworkGeographic Networks
geophysGeophysics, Continuum Mechanics, Gravity Modeling
geoRAnalysis of Geostatistical Data
GeoRangeCalculating Geographic Range from Occurrence Data
georobRobust Geostatistical Analysis of Spatial Data
geosOpen Source Geometry Engine ('GEOS') R API
geoSAEGeoadditive Small Area Model
geosapiGeoServer REST API R Interface
geoscaleGeological Time Scale Plotting
geosedSmallest Enclosing Disc for Latitude and Longitude Points
geosparkBring Local Sf to Spark
geosphereSpherical Trigonometry
geosptGeostatistical Analysis and Design of Optimal Spatial Sampling Networks
geosptdbSpatio-Temporal; Inverse Distance Weighting and Radial Basis Functions with Distance-Based Regression
geostatsAn Introduction to Statistics for Geoscientists
geostatspGeostatistical Modelling with Likelihood and Bayes
GeoTcgaDataProcessing various types of data on GEO and TCGA
geotechGeotechnical Engineering
geotoolsGeo tools
geotoolsRTools to Improve the Use of Geostatistic
geotopbricksAn R Plug-in for the Distributed Hydrological Model GEOtop
geoTSMethods for Handling and Analyzing Time Series of Satellite Images
geouyGeographic Information of Uruguay
geovizElevation and GPS Data Visualisation
geovolGeopolitical Volatility (GEOVOL) Modelling
geozooZoo of Geometric Objects
gepafGoogle Encoded Polyline Algorithm Format
gerbilGeneralized Efficient Regression-Based Imputation with Latent Processes
GerminaRIndices and Graphics for Assess Seed Germination Process
germinationmetricsSeed Germination Indices and Curve Fitting
gertSimple Git Client for R
gescaGeneralized Structured Component Analysis (GSCA)
GESEGene-Based Segregation Test
gesisdataReproducible Data Retrieval from the GESIS Data Archive
gessoHierarchical GxE Interactions in a Regularized Regression Model
gestaltTools for Making and Combining Functions
gestateGeneralised Survival Trial Assessment Tool Environment
GESTrGene Expression State Transformation
gesttoolsGeneral Purpose G-Estimation for End of Study or Time-Varying Outcomes
GETGlobal Envelopes
getableFetching Tabular Data "Onload" in Compiled R Markdown HTML Documents
GetBCBDataImports Datasets from BCB (Central Bank of Brazil) using Its Official API
GetDFPDataReading Annual Financial Reports from Bovespa's DFP, FRE and FCA System
GetDFPData2Reading Annual and Quarterly Financial Reports from B3
getDTevalTranslating Coding Statements using get() and eval() for Improved Run-Time Coding Efficiency
GetFREDataReading FRE Corporate Data of Public Traded Companies from B3
gethrAccess to Ethereum-Based Blockchains Through Geth Nodes
getip'IP' Address 'Lookup'
getlandsatGet Landsat 8 Data from Amazon Public Data Sets
getLattesImport and Process Data from the 'Lattes' Curriculum Platform
GetLattesDataReading Bibliometric Data from Lattes Platform
getMetGet Meteorological Data for Hydrologic Models
getmstatisticQuantifying Systematic Heterogeneity in Meta-Analysis
getoptC-Like 'getopt' Behavior
GetoptLongParsing Command-Line Arguments and Simple Variable Interpolation
getPassMasked User Input
getProxyGet Free Proxy IP and Port
GetQuandlDataFast and Cached Import of Data from 'Quandl' Using the 'json API'
GetRGetR: Calculate Guttman error trees in R
getsGeneral-to-Specific (GETS) Modelling and Indicator Saturation Methods
getspresSPRE Statistics for Exploring Heterogeneity in Meta-Analysis
GetTDDataGet Data for Brazilian Bonds (Tesouro Direto)
gettzGet the Timezone Information
GEVcdnGEV Conditional Density Estimation Network
GExMapA visual, intuitive, easy to use software giving access to a new type of information buried into your microarray data
gexpGenerator of Experiments
geysertimesGeyser Data from GeyserTimes.org
GFAGroup Factor Analysis
gfboostGradient-Free Gradient Boosting
gfcanalysisTools for Working with Hansen et al. Global Forest Change Dataset
GFDTests for General Factorial Designs
GFDsurvTests for Survival Data in General Factorial Designs
GFEGross Flows Estimation under Complex Surveys
gferGreen Finance and Environmental Risk
GFGM.copulaGeneralized Farlie-Gumbel-Morgenstern Copula
gfiExtremesGeneralized Fiducial Inference for Extremes
gfilmmGeneralized Fiducial Inference for Normal Linear Mixed Models
gfilogisregGeneralized Fiducial Inference for Binary Logistic Regression Models
GFisherGeneralized Fisher's Combination Tests Under Dependence
gfiUltraGeneralized Fiducial Inference for Ultrahigh-Dimensional Regression
gfontsOffline 'Google' Fonts for 'Markdown' and 'Shiny'
gfoRmulaParametric G-Formula
gfpopGraph-Constrained Functional Pruning Optimal Partitioning
gg.gapDefine Segments in y-Axis for 'ggplot2'
ggalignmentPlots 'D&D'-Style Alignment Charts
ggallinGrab Bag of 'ggplot2' Functions
ggalluvialAlluvial Plots in 'ggplot2'
GGallyExtension to 'ggplot2'
ggaltExtra Coordinate Systems, 'Geoms', Statistical Transformations, Scales and Fonts for 'ggplot2'
ggammaGeneralized Gamma Probability Distribution
gganimateA Grammar of Animated Graphics
ggasymAsymmetric Matrix Plotting in 'ggplot2'
ggbeeswarmCategorical Scatter (Violin Point) Plots
ggborderlineLine Plots that Pop
ggbreakSet Axis Break for 'ggplot2'
ggBubblesMini Bubble Plots for Comparison of Discrete Data with 'ggplot2'
ggbuildrSave Incremental Builds of Plots
ggbumpBump Chart and Sigmoid Curves
ggchartsShorten the Distance from Data Visualization Idea to Actual Plot
ggChernoffChernoff Faces for 'ggplot2'
GGClassificationGabriel Graph Based Large-Margin Classifiers
ggclevelandImplementation of Plots from Cleveland's Visualizing Data Book
ggconfSimpler Appearance Modification of 'ggplot2'
ggcorrplotVisualization of a Correlation Matrix using 'ggplot2'
ggdagAnalyze and Create Elegant Directed Acyclic Graphs
ggdarkDark Mode for 'ggplot2' Themes
ggDCACalculate and Plot Decision Curve
ggdemetra'ggplot2' Extension for Seasonal and Trading Day Adjustment with 'RJDemetra'
ggdendroCreate Dendrograms and Tree Diagrams Using 'ggplot2'
ggdistVisualizations of Distributions and Uncertainty
ggdmcCognitive Models
ggeGenotype Plus Genotype-by-Environment Biplots
ggeasyEasy Access to 'ggplot2' Commands
GGEBiplotGUIInteractive GGE Biplots in R
GGEBiplotsGGE Biplots with 'ggplot2'
ggeditInteractive 'ggplot2' Layer and Theme Aesthetic Editor
ggeffectsCreate Tidy Data Frames of Marginal Effects for 'ggplot' from Model Outputs
ggenealogyVisualization Tools for Genealogical Data
ggethoVisualisation of High-Throughput Behavioural (i.e. Ethomics) Data
ggExtraAdd Marginal Histograms to 'ggplot2', and More 'ggplot2' Enhancements
ggfactoGraphs for Correspondence Analysis
ggfanSummarise a Distribution Through Coloured Intervals
ggfittextFit Text Inside a Box in 'ggplot2'
ggfocusScales that Focus Specific Levels in your ggplot()
ggforceAccelerating 'ggplot2'
ggformulaFormula Interface to the Grammar of Graphics
ggfortifyData Visualization Tools for Statistical Analysis Results
ggfunMiscellaneous Functions for 'ggplot2'
ggfxPixel Filters for 'ggplot2' and 'grid'
gggapStreamlined Creation of Segments on the Y-Axis of 'ggplot2' Plots
gggenesDraw Gene Arrow Maps in 'ggplot2'
ggghostCapture the Spirit of Your 'ggplot2' Calls
gggibbousMoon Charts, a Pie Chart Alternative
gggridDraw with 'grid' in 'ggplot2'
ggh4xHacks for 'ggplot2'
gghalfnormCreate a Half Normal Plot Using 'ggplot2'
gghalvesCompose Half-Half Plots Using Your Favourite Geoms
ggheatmapPlot Heatmap
gghighlightHighlight Lines and Points in 'ggplot2'
gghilbertstringsA Fast 'ggplot2'-Based Implementation of Hilbert Curves
ggHoriPlotHorizon Plots for 'ggplot2'
ggimageUse Image in 'ggplot2'
ggimgGraphics Layers for Plotting Image Data with 'ggplot2'
gginferenceVisualise the Results of Inferential Statistics using 'ggplot2'
gginnardsExplore the Innards of 'ggplot2' Objects
ggipData Visualization for IP Addresses and Networks
GGIRRaw Accelerometer Data Analysis
ggiraphMake 'ggplot2' Graphics Interactive
ggiraphExtraMake Interactive 'ggplot2'. Extension to 'ggplot2' and 'ggiraph'
ggjoyJoyplots in 'ggplot2'
gglassoGroup Lasso Penalized Learning Using a Unified BMD Algorithm
gglmGrammar of Graphics for Linear Model Diagnostic Plots
gglogoGeom for Logo Sequence Plots
ggloopCreate 'ggplot2' Plots in a Loop
gglorenzPlotting Lorenz Curve with the Blessing of 'ggplot2'
ggmGraphical Markov Models with Mixed Graphs
ggmapSpatial Visualization with ggplot2
ggmcmcTools for Analyzing MCMC Simulations from Bayesian Inference
ggmixVariable Selection in Linear Mixed Models for SNP Data
GGMncvGaussian Graphical Models with Nonconvex Regularization
GGMnonregNon-Regularized Gaussian Graphical Models
ggmosaicMosaic Plots in the 'ggplot2' Framework
ggmotifExtract and Visualize Motif Information from MEME Software
ggmrGeneralized Gauss Markov Regression
GGMridgeGaussian Graphical Models Using Ridge Penalty Followed by Thresholding and Reestimation
GGMselectGaussian Graphs Models Selection
ggmullerCreate Muller Plots of Evolutionary Dynamics
ggmultiHigh Dimensional Data Visualization
ggnetworkGeometries to Plot Networks with 'ggplot2'
ggnewscaleMultiple Fill and Colour Scales in 'ggplot2'
ggnormalviolinA 'ggplot2' Extension to Make Normal Violin Plots
ggnuplotMake 'ggplot2' Look Like 'gnuplot'
ggokabeito'Okabe-Ito' Scales for 'ggplot2' and 'ggraph'
ggpacmanA 'ggplot2' and 'gganimate' Version of Pac-Man
ggpageCreates Page Layout Visualizations
ggparallelVariations of Parallel Coordinate Plots for Categorical Data
ggparliamentParliament Plots
ggparty'ggplot' Visualizations for the 'partykit' Package
ggperiodicEasy Plotting of Periodic Data with 'ggplot2'
ggplot.multistatsMultiple Summary Statistics for Binned Stats/Geometries
ggplot2Create Elegant Data Visualisations Using the Grammar of Graphics
ggplot2moviesMovies Data
ggplotAssist'RStudio' Addin for Teaching and Learning 'ggplot2'
ggplotguiCreate Ggplots via a Graphical User Interface
ggplotifyConvert Plot to 'grob' or 'ggplot' Object
ggplotlyExtraExtra Convenience Functions for 'Plotly'
ggpmiscMiscellaneous Extensions to 'ggplot2'
ggPMX'ggplot2' Based Tool to Facilitate Diagnostic Plots for NLME Models
ggpointdensityA Cross Between a 2D Density Plot and a Scatter Plot
ggpolVisualizing Social Science Data with 'ggplot2'
ggpolarDots and Their Connections in Polar Coordinate System
ggpolypathPolygons with Holes for the Grammar of Graphics
ggppGrammar Extensions to 'ggplot2'
ggprismA 'ggplot2' Extension Inspired by 'GraphPad Prism'
ggpubr'ggplot2' Based Publication Ready Plots
ggpvalAnnotate Statistical Tests for 'ggplot2'
ggQCQuality Control Charts for 'ggplot'
ggQQunifCompare Big Datasets to the Uniform Distribution
ggquickedaQuickly Explore Your Data Using 'ggplot2' and 'table1' Summary Tables
ggquiverQuiver Plots for 'ggplot2'
ggRandomForestsVisually Exploring Random Forests
ggraphAn Implementation of Grammar of Graphics for Graphs and Networks
ggraptRAllows Interactive Visualization of Data Through a Web Browser GUI
ggraspGaussian-Based Genome Representative Selector with Prioritization
ggrastrRasterize Layers for 'ggplot2'
ggrepelAutomatically Position Non-Overlapping Text Labels with 'ggplot2'
ggResidpanelPanels and Interactive Versions of Diagnostic Plots using 'ggplot2'
GGRidgeGraphical Group Ridge
ggridgesRidgeline Plots in 'ggplot2'
ggriskRisk Score Plot for Cox Regression
ggROCpackage for roc curve plot with ggplot2
ggroupsPedigree and Genetic Groups
ggsciScientific Journal and Sci-Fi Themed Color Palettes for 'ggplot2'
ggseas'stats' for Seasonal Adjustment on the Fly with 'ggplot2'
ggsegPlotting Tool for Brain Atlases
ggseg3dTri-Surface Mesh Plots for Brain Atlases
ggseqlogoA 'ggplot2' Extension for Drawing Publication-Ready Sequence Logos
ggshadowShadow and Glow Geoms for 'ggplot2'
ggsideSide Grammar Graphics
ggsignifSignificance Brackets for 'ggplot2'
ggsnNorth Symbols and Scale Bars for Maps Created with 'ggplot2' or 'ggmap'
ggsoccerPlot Soccer Event Data
ggsolvencyiiA 'ggplot2'-Plot of Composition of Solvency II SCR: SF and IM
ggsomNew Data Visualisations for SOMs Networks
ggspatialSpatial Data Framework for ggplot2
ggspectraExtensions to 'ggplot2' for Radiation Spectra
ggstanceHorizontal 'ggplot2' Components
ggstarMultiple Geometric Shape Point Layer for 'ggplot2'
ggstatsplot'ggplot2' Based Plots with Statistical Details
ggstreamCreate Streamplots in 'ggplot2'
ggstudentContinuous Confidence Interval Plots using t-Distribution
ggswissmapsOffers Various Swiss Maps as Data Frames and 'ggplot2' Objects
ggteaPalettes and Themes for 'ggplot2'
ggternAn Extension to 'ggplot2', for the Creation of Ternary Diagrams
ggtextImproved Text Rendering Support for 'ggplot2'
ggThemeAssistAdd-in to Customize 'ggplot2' Themes
ggthemesExtra Themes, Scales and Geoms for 'ggplot2'
ggtikzPost-Process 'ggplot2' Plots with 'TikZ' Code Using Plot Coordinates
GGUMGeneralized Graded Unfolding Model
ggupsetCombination Matrix Axis for 'ggplot2' to Create 'UpSet' Plots
ggvennDraw Venn Diagram by 'ggplot2'
ggVennDiagramA 'ggplot2' Implement of Venn Diagram
ggversaGraficas Versatiles Con 'ggplot2'
ggvisInteractive Grammar of Graphics
ggvoronoiVoronoi Diagrams and Heatmaps with 'ggplot2'
ggwordcloudA Word Cloud Geom for 'ggplot2'
ggxA Natural Language Interface to 'ggplot2'
gh'GitHub' 'API'
GHapGenome-Wide Haplotyping
GhatQuantifying Evolution and Selection on Complex Traits
ghcmFunctional Conditional Independence Testing with the GHCM
gheeProvides a Lightweight Interface for 'GitHub' through R
ghibliStudio Ghibli Colour Palettes
GhostMissing Data Segments Imputation in Multivariate Streams
GhostKnockoffThe Knockoff Inference Using Summary Statistics
ghqlGeneral Purpose 'GraphQL' Client
GHSGraphical Horseshoe MCMC Sampler Using Data Augmented Block Gibbs Sampler
ghypGeneralized Hyperbolic Distribution and Its Special Cases
ghypernetFit and Simulate Generalised Hypergeometric Ensembles of Graphs
gibbleGeometry Decomposition
gibbs.metNaive Gibbs Sampling with Metropolis Steps
GibbsACOVGibbs Sampler for One-Way Mixed-Effects ANOVA and ANCOVA Models
gifGraphical Independence Filtering
GifiMultivariate Analysis with Optimal Scaling
gifskiHighest Quality GIF Encoder
giftiReads in 'Neuroimaging' 'GIFTI' Files with Geometry Information
GIFTrGIFT Questions Format Generator from Dataframes
giftwrapTake Shell Commands and Turn Them into R Functions
giggGroup Inverse-Gamma Gamma Shrinkage for Sparse Regression with Grouping Structure
GIGrvgRandom Variate Generator for the GIG Distribution
GillespieSSAGillespie's Stochastic Simulation Algorithm (SSA)
GillespieSSA2Gillespie's Stochastic Simulation Algorithm for Impatient People
gimGeneralized Integration Model
gimmeGroup Iterative Multiple Model Estimation
gimmeToolsSupplemental Tools for the 'gimme' R Package
gimmsDownload and Process GIMMS NDVI3g Data
GiNAHigh Throughput Phenotyping
GiniGini Coefficient
GiniDistanceA New Gini Correlation Between Quantitative and Qualitative Variables
GiniWegNegComputing the Gini-Based Coefficients for Weighted and Negative Attributes
GInSARCorWGACOS InSAR Correction Workflow
gIPFrmGeneralized Iterative Proportional Fitting for Relational Models
giphyrR Interface to the Giphy API
GIplotGaussian Interval Plot (GIplot)
GiRaFGibbs Random Fields Analysis
giscoRDownload Map Data from GISCO API - Eurostat
GISToolsSome further GIS capabilities for R
gistrWork with 'GitHub' 'Gists'
git2rProvides Access to Git Repositories
git2rdataStore and Retrieve Data.frames in a Git Repository
gitcredsQuery 'git' Credentials from 'R'
gitdownTurn Your Git Commit Messages into a HTML Book
gitearClient to the 'gitea' API
gitgadget'Rstudio' Addin for Version Control and Assignment Management using Git
githubinstallA Helpful Way to Install R Packages Hosted on GitHub
gitignoreCreate Useful .gitignore Files for your Project
gitlabrAccess to the 'Gitlab' API
gitlinkAdd 'Git' Links to Your Web Based Assets
givitiRThe GiViTI Calibration Test and Belt
gjamGeneralized Joint Attribute Modeling
gJLS2A Generalized Joint Location and Scale Framework for Association Testing
GJRMGeneralised Joint Regression Modelling
gkg-and-k and g-and-h Distribution Functions
GK2011Gaines and Kuklinski (2011) Estimators for Hybrid Experiments
gkgraphRAccessing the Official 'Google Knowledge Graph' API
gkmSVMGapped-Kmer Support Vector Machine
glacierSMBMGlacier Surface Mass Balance Model
glamlassoPenalization in Large Scale Generalized Linear Array Models
glancedataGenerate tables and plots to get summaries of data
glarmaGeneralized Linear Autoregressive Moving Average Models
GlarmaVarSelVariable Selection in Sparse GLARMA Models
glassdoorInterface to 'Glassdoor' API
glassoGraphical Lasso: Estimation of Gaussian Graphical Models
glassoFastFast Graphical LASSO
glbaGeneral Linear Ballistic Accumulator Models
glcaAn R Package for Multiple-Group Latent Class Analysis
glcmCalculate Textures from Grey-Level Co-Occurrence Matrices (GLCMs)
gldEstimation and Use of the Generalised (Tukey) Lambda Distribution
GLDEXFitting Single and Mixture of Generalised Lambda Distributions (RS and FMKL) using Various Methods
GLDregFit GLD Regression Model and GLD Quantile Regression Model to Empirical Data
gldrmGeneralized Linear Density Ratio Models
GLIDEGlobal and Individual Tests for Direct Effects
glinternetLearning Interactions via Hierarchical Group-Lasso Regularization
gllmGeneralised log-Linear Model
gllvmGeneralized Linear Latent Variable Models
glm.deploy'C' and 'Java' Source Code Generator for Fitted Glm Objects
glm.predictPredicted Values and Discrete Changes for GLM
glm2Fitting Generalized Linear Models
GLMaSPUAn Adaptive Test on High Dimensional Parameters in Generalized Linear Models
glmbbAll Hierarchical or Graphical Models for Generalized Linear Model
glmcFitting Generalized Linear Models Subject to Constraints
GLMcatGeneralized Linear Models for Categorical Responses
glmdiscDiscretization and Grouping for Logistic Regression
glmdmR Code for Simulation of GLMDM
glmeGeneralized Linear Mixed Effects Models
glmertreeGeneralized Linear Mixed Model Trees
glmglrtGLRT P-Values in Generalized Linear Models
glmlepFit GLM with LEP-Based Penalized Maximum Likelihood
glmmGeneralized Linear Mixed Models via Monte Carlo Likelihood Approximation
GLMMadaptiveGeneralized Linear Mixed Models using Adaptive Gaussian Quadrature
glmmEPGeneralized Linear Mixed Model Analysis via Expectation Propagation
glmmfieldsGeneralized Linear Mixed Models with Robust Random Fields for Spatiotemporal Modeling
glmmLassoVariable Selection for Generalized Linear Mixed Models by L1-Penalized Estimation
glmmMLGeneralized Linear Models with Clustering
GLMMRRGeneralized Linear Mixed Model (GLMM) for Binary Randomized Response Data
glmmSeqGeneral Linear Mixed Models for Gene-Level Differential Expression
glmmsrFit a Generalized Linear Mixed Model
glmmTMBGeneralized Linear Mixed Models using Template Model Builder
glmnetLasso and Elastic-Net Regularized Generalized Linear Models
glmnetcrFit a Penalized Constrained Continuation Ratio Model for Predicting an Ordinal Response
glmnetSEAdd Nonparametric Bootstrap SE to 'glmnet' for Selected Coefficients (No Shrinkage)
glmnetUtilsUtilities for 'Glmnet'
GLMpackData and Code to Accompany Generalized Linear Models, 2nd Edition
glmpathL1 Regularization Path for Generalized Linear Models and Cox Proportional Hazards Model
glmpathcrFit a Penalized Continuation Ratio Model for Predicting an Ordinal Response
glmpcaDimension Reduction of Non-Normally Distributed Data
GLMsDataGeneralized Linear Model Data Sets
GlmSimulatoRCreates Ideal Data for Generalized Linear Models
glmtlpGeneralized Linear Models with Truncated Lasso Penalty
glmtoolboxSet of Tools to Data Analysis using Generalized Linear Models
glmtransTransfer Learning with Regularized Generalized Linear Models
glmtreeLogistic Regression Trees
glmultiModel Selection and Multimodel Inference Made Easy
glmvsdVariable Selection Deviation Measures and Instability Tests for High-Dimensional Generalized Linear Models
glmxGeneralized Linear Models Extended
GlobalDevianceGlobal Deviance Permutation Tests
GlobalFitBi-Level Optimization of Metabolic Network Models
globalGSAGlobal Gene-Set Analysis for Association Studies
globalKinhomInhomogeneous K- And Pair Correlation Functions Using Global Estimators
GlobalOptionsGenerate Functions to Get or Set Global Options
globalOptTestsObjective functions for benchmarking the performance of global optimization algorithms
globalsIdentify Global Objects in R Expressions
globePlot 2D and 3D Views of the Earth, Including Major Coastline
glogisFitting and Testing Generalized Logistic Distributions
glowMake Plots that Glow
glpkAPIR Interface to C API of GLPK
glrtGeneralized Logrank Tests for Interval-censored Failure Time Data
gLRTHGenome-Wide Association and Linkage Analysis under Heterogeneity
GLSMEGeneralized Least Squares with Measurement Error
glueInterpreted String Literals
gluedownWrap Vectors in Markdown Formatting
gluvarproGlucose Variability Measures from Continuous Glucose Monitoring Data
glvmfitMethods to Assess Generalized Latent Variable Model Fit
glycanrTools for Analysing N-Glycan Data
gmGenerate Music Easily and Show Them Anywhere
gmaGranger Mediation Analysis
GMACGenomic Mediation Analysis with Adaptive Confounding Adjustment
gmailrAccess the 'Gmail' 'RESTful' API
GmAMisc'Gianmarco Alberti' Miscellaneous
gmapsdistanceDistance and Travel Time Between Two Points from Google Maps
gmatSimulation of Graphical Correlation Matrices
GMCMFast Estimation of Gaussian Mixture Copula Models
gMCPGraph Based Multiple Comparison Procedures
gmDatabaseAccessing a Geometallurgical Database with R
GMDHShort Term Forecasting via GMDH-Type Neural Network Algorithms
GMDH2Binary Classification via GMDH-Type Neural Network Algorithms
GMDHregRegression using GMDH Algorithms
GmedianGeometric Median, k-Medians Clustering and Robust Median PCA
gmetaMeta-Analysis via a Unified Framework of Confidence Distribution
gmfdInference and Clustering of Functional Data
gmGeostatsGeostatistics for Compositional Analysis
gmgmGaussian Mixture Graphical Model Learning and Inference
GmiscDescriptive Statistics, Transition Plots, and More
GMKMcharlieUnsupervised Gaussian Mixture and Minkowski and Spherical K-Means with Constraints
gmmGeneralized Method of Moments and Generalized Empirical Likelihood
GMMATGeneralized Linear Mixed Model Association Tests
GMMBoostLikelihood-Based Boosting for Generalized Mixed Models
gmnlMultinomial Logit Models with Random Parameters
gmodelsVarious R Programming Tools for Model Fitting
gMOIPTools for 2D and 3D Plots of Single and Multi-Objective Linear/Integer Programming Models
gmpMultiple Precision Arithmetic
GMProGraph Matching with Degree Profiles
gms'GAMS' Modularization Support Package
GMSEGeneralised Management Strategy Evaluation Simulator
GMSimputeGeneralized Mass Spectrum Missing Peaks Abundance Imputation
gmtInterface Between GMT Map-Making Software and R
gmvarkitEstimate Gaussian or Student's t Mixture Vector Autoregressive Model
gMWTGeneralized Mann-Whitney Type Tests
GMZTestsStatistical Tests
GNARMethods for Fitting Network Time Series Models
GNEComputation of Generalized Nash Equilibria
gnFitGoodness of Fit Test for Continuous Distribution Functions
gnlmGeneralized Nonlinear Regression Models
gnmGeneralized Nonlinear Models
gnnGenerative Neural Networks
gnomonicMEstimate Natural Mortality for Different Life Stages
gnormGeneralized Normal/Exponential Power Distribution
GNRSAccess the 'Geographic Name Resolution Service'
GNSSsegHomogenization of GNSS Series
gnumericRead Data from Files Readable by 'gnumeric'
goevegFunctions for Community Data and Ordinations
gofastrFast DocumentTermMatrix and TermDocumentMatrix Creation
GofCensGoodness-of-Fit Methods for Right-Censored Data
gofCopulaGoodness-of-Fit Tests for Copulae
goffdaGoodness-of-Fit Tests for Functional Data
gofgammaGoodness-of-Fit Tests for the Gamma Distribution
GoFKernelTesting Goodness-of-Fit with the Kernel Density Estimator
GofKmtKhmaladze Martingale Transformation Goodness-of-Fit Test
GOFShinyInteractive Document for Working with Goodness of Fit Analysis
goftTests of Fit for some Probability Distributions
goftestClassical Goodness-of-Fit Tests for Univariate Distributions
GOGANPAGO-Functional-Network-based Gene-Set-Analysis
gogarchGeneralized Orthogonal GARCH (GO-GARCH) models
goldiGene Ontology Label Discernment and Identification
goldilocksGoldilocks Adaptive Trial Designs for Time-to-Event Endpoints
golemA Framework for Robust Shiny Applications
gommsGLM-Based Ordination Method
GomoGomonoMiAnimate Text using the 'Animate.css' Library
gontrDataset for 'GOxploreR'
goodGood Regression
GoodmanKruskalAssociation Analysis for Categorical Variables
goodpracticeAdvice on R Package Building
googleAnalyticsRGoogle Analytics API into R
googleAuthRAuthenticate and Create Google APIs
googleCloudRunnerR Scripts in the Google Cloud via Cloud Run, Cloud Build and Cloud Scheduler
googleCloudStorageRInterface with Google Cloud Storage API
googleCloudVisionRAccess to the 'Google Cloud Vision' API for Image Recognition, OCR and Labeling
googleComputeEngineRR Interface with Google Compute Engine
googledriveAn Interface to Google Drive
googleformrCollect Data Programmatically by POST Methods to Google Forms
GoogleImage2ArrayCreate Array Data from 2D Image Thumbnails via Google Image Search
GoogleKnowledgeGraphRRetrieve Information from 'Google Knowledge Graph' API
googleLanguageRCall Google's 'Natural Language' API, 'Cloud Translation' API, 'Cloud Speech' API and 'Cloud Text-to-Speech' API
googlenlpAn Interface to Google's Cloud Natural Language API
googlePolylinesEncoding Coordinates into 'Google' Polylines
googlePrintrConnect to 'Google Cloud Print' API
googlePublicDataWorking with Google's 'Public Data Explorer' DSPL Metadata Files
googlePubsubRR Interface for Google 'Cloud Pub/Sub' REST API
googlerGoogle from the R Console
googlesheetsManage Google Spreadsheets from R
googlesheets4Access Google Sheets using the Sheets API V4
googleTagManageRAccess the 'Google Tag Manager' API using R
googleVisR Interface to Google Charts
googlewayAccesses Google Maps APIs to Retrieve Data and Plot Maps
GOplotVisualization of Functional Analysis Data
GORCureFit Generalized Odds Rate Mixture Cure Model with Interval Censored Data
goricGeneralized Order-Restricted Information Criterion
gotopScroll Back to Top Icon in 'rmarkdown' and 'shiny'
govdownGOV.UK Style Templates for R Markdown
govStatJPNfunctions to get public survey data in Japan
gowerGower's Distance
GOxploreRStructural Exploration of the Gene Ontology (GO) Knowledge Base
goxygenIn-Code Documentation for 'GAMS'
gpairsThe Generalized Pairs Plot
GParetoGaussian Processes for Pareto Front Estimation and Optimization
GPArotationGPA Factor Rotation
GPBayesTools for Gaussian Process Modeling in Uncertainty Quantification
gpboostCombining Tree-Boosting with Gaussian Process and Mixed Effects Models
gpbStatComprehensive Statistical Analysis of Plant Breeding Experiments
gpclibGeneral Polygon Clipping Library for R
GPCMlassoDifferential Item Functioning in Generalized Partial Credit Models
gPdtestBootstrap goodness-of-fit test for the generalized Pareto distribution
GPFDAGaussian Process for Functional Data Analysis
GPfitGaussian Processes Modeling
gpgGNU Privacy Guard for R
GpGpFast Gaussian Process Computation Using Vecchia's Approximation
GPICQuantifying Group Performance in Individual Competitions
gpindexGeneralized Price and Quantity Indexes
gpk100 Data Sets for Statistics Education
GPL2025Convert Chip ID of the GPL2015 into GeneBank Accession and ENTREZID
gpliteImplementation for the Most Common Gaussian Process Models
gplmGeneralized Partial Linear Models (GPLM)
gplotsVarious R Programming Tools for Plotting Data
GPLTRGeneralized Partially Linear Tree-Based Regression Model
GPMGaussian Process Modeling of Multi-Response and Possibly Noisy Datasets
gpmapAnalysing and Plotting Genotype-Phenotype Maps
GPoMGeneralized Polynomial Modelling
GPoM.FDLyapuLyapunov Exponents and Kaplan-Yorke Dimension
GPPGaussian Process Projection
gppmGaussian Process Panel Modeling
GPrankGaussian Process Ranking of Multiple Time Series
GPRMortalityGaussian Process Regression for Mortality Rates
gProfileRInterface to the 'g:Profiler' Toolkit
gprofiler2Interface to the 'g:Profiler' Toolset
GPSCDFGeneralized Propensity Score Cumulative Distribution Function
GPSeqClusSequential Clustering Algorithm for Location Data
gptkGaussian Processes Tool-Kit
GPvamMaximum Likelihood Estimation of Multiple Membership Mixed Models Used in Value-Added Modeling
GPvecchiaScalable Gaussian-Process Approximations
gpxProcess GPX Files into R Data Structures
gqlr'GraphQL' Server in R
gquadPrediction of G Quadruplexes and Other Non-B DNA Motifs
grabsamplingProbability of Detection for Grab Sample Selection
GraceGraph-Constrained Estimation and Hypothesis Tests
gradDescentGradient Descent for Regression Tasks
gradeBinary Grading functions for R
gradeRHelps Grade Assignment Submissions that are R Scripts
gradientPickerD3Interactive Color Gradient Picker Using 'htmlwidgets' and the Modified JS Script 'jquery-gradient-picker'
gRainGraphical Independence Networks
grainchangerMoving-Window and Direct Data Aggregation
grainscapeLandscape Connectivity, Habitat, and Protected Area Networks
gramEvolGrammatical Evolution for R
GramQuadGram Quadrature
GRANBaseCreating Continuously Integrated Package Repositories from Manifests
GRANCoreClasses and Methods for 'GRANBase'
grangersInference on Granger-Causality in the Frequency Domain
granovaGraphical Analysis of Variance
granovaGGGraphical Analysis of Variance Using ggplot2
GRAPEGene-Ranking Analysis of Pathway Expression
grapesMake Binary Operators
grapesAgri1Collection of Shiny Apps for Agricultural Research Data Analysis
gRapfaAcyclic Probabilistic Finite Automata
graph3dA Wrapper of the JavaScript Library 'vis-graph3d'
graph4lgBuild Graphs for Landscape Genetics Analysis
GrapheRA Multi-Platform GUI for Drawing Customizable Graphs in R
grapheratorA Modular Multi-Step Graph Generator
graphframesInterface for 'GraphFrames'
graphhopperAn R Interface to the 'GraphHopper' Directions API
graphicalExtremesStatistical Methodology for Graphical Extreme Value Models
graphicalVARGraphical VAR for Experience Sampling Data
graphkernelsGraph Kernels
graphlayoutsAdditional Layout Algorithms for Network Visualizations
graphonA Collection of Graphon Estimation Methods
GraphPCAGraphical Tools of Histogram PCA
graphqlA GraphQL Query Parser
graphsimSimulate Expression Data from 'igraph' Networks
graphTweetsVisualise Twitter Interactions
GrassmannOptimGrassmann Manifold Optimization
gratesGrouped Date Classes
gratiaGraceful 'ggplot'-Based Graphics and Other Functions for GAMs Fitted Using 'mgcv'
graticuleMeridional and Parallel Lines for Maps
gratisGenerating Time Series with Diverse and Controllable Characteristics
grattanAustralian Tax Policy Analysis
gravitasExplore Probability Distributions for Bivariate Temporal Granularities
gravityEstimation Methods for Gravity Models
gRbaseA Package for Graphical Modelling in R
gRcInference in Graphical Gaussian Models with Edge and Vertex Symmetries
GRCdataParameter Inference and Optimal Designs for Grouped and/or Right-Censored Count Data
grecGradient-Based Recognition of Spatial Patterns in Environmental Data
greedClustering and Model Selection with the Integrated Classification Likelihood
GreedyEPLGreedy Expected Posterior Loss
GreedyExperimentalDesignGreedy Experimental Design Construction
GreedyExperimentalDesignJARsGreedyExperimentalDesign JARs
greekLettersRoutines for Writing Greek Letters and Mathematical Symbols on the 'RStudio' and 'RGui'
greeksSensitivities of Prices of Financial Options
greenclustCombine Categories Using Greenacre's Method
GregRegression Helper Functions
gregRyGREGORY Estimation
gremlinMixed-Effects REML Incorporating Generalized Inverses
GREMLINSGeneralized Multipartite Networks
grenAdaptive Group-Regularized Logistic Elastic Net Regression
greportGraphical Reporting for Clinical Trials
gretaSimple and Scalable Statistical Modelling in R
gretelGeneralized Path Analysis for Social Networks
gretlRKnit-Engine for 'Gretl'
grexGene ID Mapping for Genotype-Tissue Expression (GTEx) Data
greyboxToolbox for Model Building and Forecasting
GreyModelFitting and Forecasting of Grey Model
greyzoneSurvFit a Grey-Zone Model with Survival Data
grfGeneralized Random Forests
gridBaseIntegration of base and grid graphics
gridBezierBezier Curves in 'grid'
gridDebugDebugging 'grid' Graphics
gridExtraMiscellaneous Functions for "Grid" Graphics
gridGeometryPolygon Geometry in 'grid'
gridGraphicsRedraw Base Graphics Using 'grid' Graphics
gridGraphvizDrawing Graphs with 'grid'
GridOnClustersCluster-Preserving Multivariate Joint Grid Discretization
gridpattern'grid' Pattern Grobs
gridsamplerA Simulation Tool to Determine the Required Sample Size for Repertory Grid Studies
gridSVGExport 'grid' Graphics as SVG
gridtextImproved Text Rendering Support for 'Grid' Graphics
gRimGraphical Interaction Models
grImportImporting Vector Graphics
grImport2Importing 'SVG' Graphics
GrimRCalculate Optical Parameters from Spindle Stage Measurements
grippGeneral Inverse Problem Platform
grizbayrBayesian Inference for A|B and Bandit Marketing Tests
grmsemGenetic-Relationship-Matrix Structural Equation Modelling (GRMSEM)
grnnGeneral regression neural network
GRNNsGeneral Regression Neural Networks Package
GROANGenomic Regression Workbench
grobblRCreating Flexible, Reproducible 'PDF' Reports
grocGeneralized Regression on Orthogonal Components
gromovlabGromov-Hausdorff Type Distances for Labeled Metric Spaces
groundhogThe Simplest Solution to Version-Control for CRAN Packages
GroupBNInferring Group Bayesian Networks using Hierarchical Feature Clustering
GroupComparisonsPaired/Unpaired Parametric/Non-Parametric Group Comparisons
groupdata2Creating Groups from Data
groupedRegression Analysis of Grouped and Coarse Data
groupedSurvEfficient Estimation of Grouped Survival Models
groupICAIndependent Component Analysis for Grouped Data
grouprGroups with Inapplicable Values
groupRemMapRegularized Multivariate Regression for Identifying Master Predictors Using the GroupRemMap Penalty
GroupSeqA GUI-Based Program to Compute Probabilities Regarding Group Sequential Designs
groupsubsetselectionGroup Subset Selection
GroupTestMultiple Testing Procedure for Grouped Hypotheses
groupTestingSimulating and Modeling Group (Pooled) Testing Data
groupWQSGrouped Weighted Quantile Sum Regression
groveWavelet Functional ANOVA Through Markov Groves
growfunctionsBayesian Non-Parametric Dependent Models for Time-Indexed Functional Data
growthMultivariate Normal and Elliptically-Contoured Repeated Measurements Models
growthcurverSimple Metrics to Summarize Growth Curves
growthmodelsNonlinear Growth Models
growthPhenoPlotting, Smoothing and Growth Trait Extraction for Longitudinal Data
growthrateBayesian reconstruction of growth velocity
growthratesEstimate Growth Rates from Experimental Data
grpCoxPenalized Cox Model for High-Dimensional Data with Grouped Predictors
grplassoFitting User-Specified Models with Group Lasso Penalty
grplassocatStandardization for Group Lasso Models with Categorical Predictors
grpregRegularization Paths for Regression Models with Grouped Covariates
grpselGroup Subset Selection
grpSLOPEGroup Sorted L1 Penalized Estimation
GrpStringPatterns and Statistical Differences Between Two Groups of Strings
GRPtestsGoodness-of-Fit Tests in High-Dimensional GLMs
grrAlternative Implementations of Base R Functions
GRS.testGRS Test for Portfolio Efficiency, Its Statistical Power Analysis, and Optimal Significance Level Calculation
grtGeneral Recognition Theory
GRToTools for the Analysis of Gutenberg-Richter Distributions of Earthquake Magnitudes
GSAGene Set Analysis
GSA.UNGlobal Sensitivity Analysis Tool
GSAfisherCombinedGene Set Analysis with Fisher Combined Method
GSAgmGene Set Analysis using the Gamma Method
gsalibUtility Functions For GATK
GSAQGene Set Analysis with QTL
gsarimaTwo Functions for Generalized SARIMA Time Series Simulation
gsbDesignGroup Sequential Bayes Design
gsbmEstimate Parameters in the Generalized SBM
gscaLCAGeneralized Structure Component Analysis- Latent Class Analysis & Latent Class Regression
gscountsGroup Sequential Designs with Negative Binomial Outcomes
GSDAGene Set Distance Analysis (GSDA)
gsDesignGroup Sequential Design
GSERobust Estimation in the Presence of Cellwise and Casewise Contamination and Missing Data
gsEasyGene Set Enrichment Analysis in R
GSEDGroup Sequential Enrichment Design
gSegGraph-Based Change-Point Detection (g-Segmentation)
GSelectionGenomic Selection
gSEMSemi-Supervised Generalized Structural Equation Modeling
gsetGroup Sequential Design in Equivalence Studies
gsheetDownload Google Sheets Using Just the URL
gsignalSignal Processing
gsisdecoderHigh Efficient Functions to Decode NFL Player IDs
gslWrapper for the Gnu Scientific Library
gslnlsGSL Nonlinear Least-Squares Fitting
gsloidGlobal Sea Level and Oxygen Isotope Data
GSMGamma Shape Mixture
gsmoothrSmoothing tools
GSMXMultivariate Genomic Selection
GSODRGlobal Surface Summary of the Day ('GSOD') Weather Data Client
GSparOGroup Sparse Optimization
gsrsA Group-Specific Recommendation System
gsrsbGroup Sequential Refined Secondary Boundary
gssGeneral Smoothing Splines
GSSEGenotype-Specific Survival Estimation
gstarGeneralized Space-Time Autoregressive Model
gstatSpatial and Spatio-Temporal Geostatistical Modelling, Prediction and Simulation
gStreamGraph-Based Sequential Change-Point Detection for Streaming Data
gstsmGeneralized Spatial-Time Sequence Miner
gsubfnUtilities for Strings and Function Arguments
gswGibbs Sea Water Functions
GsymPointEstimation of the Generalized Symmetry Point, an Optimal Cutpoint in Continuous Diagnostic Tests
gsynthGeneralized Synthetic Control Method
gtEasily Create Presentation-Ready Display Tables
gt4irevalGeneralizability Theory for Information Retrieval Evaluation
gtableArrange 'Grobs' in Tables
gtcorrCalculate efficiencies of group testing algorithms with correlated responses
gteGeneralized Turnbull's Estimator
gTestsGraph-Based Two-Sample Tests
gtfs2gpsConverting Transport Data from GTFS Format to GPS-Like Records
gtfsioRead and Write General Transit Feed Specification (GTFS) Files
gtfsrouterRouting with GTFS (General Transit Feed Specification) Data
gtfstoolsGeneral Transit Feed Specification (GTFS) Editing and Analysing Tools
gtheoryApply Generalizability Theory with R
gtoolsVarious R Programming Tools
gtopGame-Theoretically OPtimal (GTOP) Reconciliation Method
gtrendsRPerform and Display Google Trends Queries
gtsummaryPresentation-Ready Data Summary and Analytic Result Tables
gtWASGenome and Transcriptome Wide Association Study
guaguasNombres Inscritos en Chile (1920 - 2020)
guardianapiAccess 'The Guardian' Newspaper Open Data API
GuerryMaps, Data and Methods Related to Guerry (1833) "Moral Statistics of France"
guessAdjust Estimates of Learning for Guessing
GuessCompxEmpirically Estimates Algorithm Complexity
gufGenerally Useful Functions
GUIDEGUI for DErivatives in R
GUILDSImplementation of Sampling Formulas for the Unified Neutral Model of Biodiversity and Biogeography, with or without Guild Structure
guiplotUser-Friendly GUI Plotting Tools
GUIProfilerGraphical User Interface for Rprof()
gumbelThe Gumbel-Hougaard Copula
gumbootBootstrap Analyses of Sampling Uncertainty in Goodness-of-Fit Statistics
GUniFracGeneralized UniFrac Distances, Distance-Based Multivariate Methods and Feature-Based Univariate Methods for Microbiome Data Analysis
gunitConverts Conductance Units
gunsalesStatistical Analysis of Monthly Background Checks of Gun Purchases
gustaveA User-Oriented Statistical Toolkit for Analytical Variance Estimation
gutenbergrDownload and Process Public Domain Works from Project Gutenberg
GUTSFast Calculation of the Likelihood of a Stochastic Survival Model
GVARXPerform Global Vector Autoregression Estimation and Inference
gvcGlobal Value Chains Tools
gvcm.catRegularized Categorical Effects/Categorical Effect Modifiers/Continuous/Smooth Effects in GLMs
gvcRGenotypic Variance Components
gvlmaGlobal Validation of Linear Models Assumptions
gwaRsManhattan, Q-Q, and PCA Plots using 'ggplot2'
GWASbyClusterIdentifying Significant SNPs in Genome Wide Association Studies (GWAS) via Clustering
GWASExactHWExact Hardy-Weinburg testing for Genome Wide Association Studies
gwasforestMake Forest Plot with GWAS Data
GWASinlpsNonlocal Prior Based Iterative SNP Selection Tool for Genome-Wide Association Studies
GWASinspectorComprehensive and Easy to Use Quality Control of GWAS Results
gwasrapidd'REST' 'API' Client for the 'NHGRI'-'EBI' 'GWAS' Catalog
gwdegreeA Shiny App to Aid Interpretation of Geometrically-Weighted Degree Estimates in Exponential Random Graph Models
gwerGeographically Weighted Elliptical Regression
gwerAMControlling the genome-wide type I error rate in association mapping experiments
GWEXMulti-Site Stochastic Models for Daily Precipitation and Temperature
gwfaGeographically Weighted Fractal Analysis
GWGCalculation of probabilities for inadequate and excessive gestational weight gain
GWICount and Continuous Generalized Variability Indexes
gWidgets2Rewrite of gWidgets API for Simplified GUI Construction
gWidgets2tcltkToolkit Implementation of gWidgets2 for tcltk
GWLelastGeographically Weighted Logistic Elastic Net Regression
GWmodelGeographically-Weighted Models
GWnnegPCAGeographically Weighted Non-Negative Principal Components Analysis
GWpcorGeographically Weighted Partial Correlation Coefficient
gwpcormapperGeographically Weighted Partial Correlation Mapper
GWPR.lightGeographically Weighted Panel Regression
gWQSGeneralized Weighted Quantile Sum Regression
GWRMGeneralized Waring Regression Model for Count Data
gwrpvrGenome-Wide Regression P-Value (Gwrpv)
gwrrFits geographically weighted regression models with diagnostic tools
GWSDATGroundWater Spatiotemporal Data Analysis Tool (GWSDAT)
gwsemGenome-Wide Structural Equation Modeling
GWsignifEstimating Genome-Wide Significance for Whole Genome Sequencing Studies, Either Single SNP Tests or Region-Based Tests
GxEScanRRun GWAS/GWEIS Scans Using Binary Dosage Files
GxMMaximum Likelihood Estimation for Gene-by-Measured Environment Interaction Models
gymProvides Access to the OpenAI Gym API
h2oR Interface for the 'H2O' Scalable Machine Learning Platform
h2o4gpuInterface to 'H2O4GPU'
H2x2FactorialSample Size Calculation in Hierarchical 2x2 Factorial Trials
haarfiszSoftware to perform Haar Fisz transforms
hablarNon-Astonishing Results in R
HACEstimation, Simulation and Visualization of Hierarchical Archimedean Copulae (HAC)
hackeRnewsWrapper for the 'Official Hacker News' API
hacksawAdditional Tools for Splitting and Cleaning Data
HACSimIterative Extrapolation of Species' Haplotype Accumulation Curves for Genetic Diversity Assessment
HadamardRHadamard Matrix Generation
HaDeXAnalysis and Visualisation of Hydrogen/Deuterium Exchange Mass Spectrometry Data
HadoopStreamingUtilities for using R scripts in Hadoop streaming
hadronAnalysis Framework for Monte Carlo Simulation Data in Physics
hagisAnalysis of Plant Pathogen Pathotype Complexities, Distributions and Diversity
hakaiApiAuthenticated HTTP Request Client for the 'Hakai' API
halfcirclePlot Halfcircle Diagram
hamletHierarchical Optimal Matching and Machine Learning Toolbox
handlrConvert Among Citation Formats
HandTill2001Multiple Class Area under ROC Curve
handwriterHandwriting Analysis in R
handyplotsHandy Plots
hansHaversines are not Slow
hansardProvides Easy Downloading Capabilities for the UK Parliament API
hapassocInference of Trait Associations with SNP Haplotypes and Other Attributes using the EM Algorithm
HapiInference of Chromosome-Length Haplotypes Using Genomic Data of Single Gamete Cells
HaplinAnalyzing Case-Parent Triad and/or Case-Control Data with SNP Haplotypes
haplo.statsStatistical Analysis of Haplotypes with Traits and Covariates when Linkage Phase is Ambiguous
haploRQuery 'HaploReg', 'RegulomeDB'
HaploSimFunctions to simulate haplotypes
haplotyperTool for Clustering Genotypes in Haplotypes
haplotypesManipulating DNA Sequences and Estimating Unambiguous Haplotype Network with Statistical Parsimony
happytimeTwo Games to Relieve the Boredom
hapsimHaplotype Data Simulation
hardhatConstruct Modeling Packages
HardyWeinbergStatistical Tests and Graphics for Hardy-Weinberg Equilibrium
HARModelHeterogeneous Autoregressive Models
harmonicmeanpHarmonic Mean p-Values and Model Averaging by Mean Maximum Likelihood
HarmonicRegressionHarmonic Regression to One or more Time Series
harmonyFast, Sensitive, and Accurate Integration of Single Cell Data
harrietrWrangle Phylogenetic Distance Matrices and Other Utilities
harrypotterPalettes Generated from All "Harry Potter" Movies
HARtoolsRead HTTP Archive ('HAR') Data
Harvest.TreeHarvest the Classification Tree
hashFull Feature Implementation of Hash/Associated Arrays/Dictionaries
hashidsGenerate Short Unique YouTube-Like IDs (Hashes) from Integers
hashrHash R Objects to Integers Fast
hasseDiagramDrawing Hasse Diagram
havenImport and Export 'SPSS', 'Stata' and 'SAS' Files
hawkesHawkes process simulation and calibration toolkit
hawkesbowEstimation of Hawkes Processes from Binned Observations
hazerIdentifying Foggy and Cloudy Images by Quantifying Haziness
hazusDamage functions from FEMA's HAZUS software for use in modeling financial losses from natural disasters
hBayesDMHierarchical Bayesian Modeling of Decision-Making Tasks
hbbrHierarchical Bayesian Benefit-Risk Assessment Using Discrete Choice Experiment
HBglmHierarchical Bayesian Regression for GLMs
hbimHill/Bliss Independence Model for Combination Vaccines
hbmHierarchical Block Matrix Analysis
hbmemHierarchical Bayesian Analysis of Recognition Memory
hbsaeHierarchical Bayesian Small Area Estimation
HBSTMHierarchical Bayesian Space-Time models for Gaussian space-time data
HBV.IANIGLAModular Hydrological Model
hcandersenrH.C. Andersens Fairy Tales
hccHidden correlation check
hcciInterval estimation for the parameters of linear models with heteroskedasticity (Wild Bootstrap)
HCDHierarchical Community Detection by Recursive Partitioning
hchinamapMapping China and Its Provinces
HCmodelSetsRegression with a Large Number of Potential Explanatory Variables
hcpChange Point Estimation for Regression with Heteroscedastic Data
HCRCausal Discovery from Discrete Data using Hidden Compact Representation
HCTRHigher Criticism Tuned Regression
hctrialUsing Historical Controls for Designing Phase II Clinical Trials
hdaHeteroscedastic Discriminant Analysis
hdbinsegChange-Point Analysis of High-Dimensional Time Series via Binary Segmentation
hdbmHigh Dimensional Bayesian Mediation Analysis
HDBRRHigh Dimensional Bayesian Ridge Regression without MCMC
HDCIHigh Dimensional Confidence Interval Based on Lasso and Bootstrap
HDclassifHigh Dimensional Supervised Classification and Clustering
HDclustClustering High Dimensional Data with Hidden Markov Model on Variable Blocks
HDcpDetectDetect Change Points in Means of High Dimensional Data
HDCurvesHierarchical Derivative Curve Estimation
hddEasy Manipulation of Out of Memory Data Sets
HDDesignSample Size Calculation for High Dimensional Classification Study
hddplotUse Known Groups in High-Dimensional Data to Derive Scores for Plots
hdf5rInterface to the 'HDF5' Binary Data Format
hdfqlrInterface to 'HDFql' API
HDGLMTests for High Dimensional Generalized Linear Models
hdiHigh-Dimensional Inference
HDIntervalHighest (Posterior) Density Intervals
HDiRDirectional Highest Density Regions
hdiVARStatistical Inference for Noisy Vector Autoregression
hdlmFitting High Dimensional Linear Models
HDLSSkSTDistribution-Free Exact High Dimensional Low Sample Size k-Sample Tests
hdmHigh-Dimensional Metrics
HDMDStatistical Analysis Tools for High Dimension Molecular Data (HDMD)
hdmeHigh-Dimensional Regression with Measurement Error
HDMTA Multiple Testing Procedure for High-Dimensional Mediation Hypotheses
hdnomBenchmarking and Visualization Toolkit for Penalized Cox Models
HDoutliersLeland Wilkinson's Algorithm for Detecting Multidimensional Outliers
hdpcaPrincipal Component Analysis in High-Dimensional Data
HDPenRegHigh-Dimensional Penalized Regression
hdrcdeHighest Density Regions and Conditional Density Estimation
hdsHazard Discrimination Summary
HDShOPHigh-Dimensional Shrinkage Optimal Portfolios
HDSpatialScanMultivariate and Functional Spatial Scan Statistics
HDtestHigh Dimensional Hypothesis Testing for Mean Vectors, Covariance Matrices, and White Noise of Vector Time Series
HDTSAHigh Dimensional Time Series Analysis Tools
HDtweedieThe Lasso for the Tweedie's Compound Poisson Model Using an IRLS-BMD Algorithm
healthcareaiTools for Healthcare Machine Learning
healthfinanceFinancial Projections and Planning for Health Care Practices
healthyRHospital Data Analysis Workflow Tools
healthyR.aiThe Machine Learning and AI Modeling Companion to 'healthyR'
healthyR.dataData Only Package to 'healthyR'
healthyR.tsThe Time Series Modeling Companion to 'healthyR'
healthyverseEasily Install and Load the 'healthyverse'
heapsofpapersEasily Download Heaps of PDF and CSV Files
heatexHeat exchange calculations during physical activity
heatmap3An Improved Heatmap Package
heatmapFitFit Statistic for Binary Dependent Variable Models
heatmapFlexTools to Generate Flexible Heatmaps
heatmaplyInteractive Cluster Heat Maps Using 'plotly' and 'ggplot2'
heatwaveRDetect Heatwaves and Cold-Spells
heavyRobust Estimation Using Heavy-Tailed Distributions
HeckmanEMFit Normal or Student-t Heckman Selection Models
HEDA'Hydropeaking Events Detection Algorithm'
heddlrDynamic R Markdown Document Generation
hedgehogProperty-Based Testing
heemodMarkov Models for Health Economic Evaluations
heimsDecode and Validate HEIMS Data from Department of Education, Australia
heldaPreprocess Data and Get Better Insights from Machine Learning Models
helixvisVisualize Alpha-Helical Peptide Sequences
HellCorThe Hellinger Correlation
hellnoProviding 'stringsAsFactors=FALSE' Variants of 'data.frame()' and 'as.data.frame()'
helloJavaWorldHello Java World
helminthRAccess London Natural History Museum Host-Helminth Record Database
HelpersMGTools for Environmental Analyses, Ecotoxicology and Various R Functions
helsinkiR Tools for Helsinki Open Data
HEMDAGHierarchical Ensemble Methods for Directed Acyclic Graphs
heplotsVisualizing Hypothesis Tests in Multivariate Linear Models
hereA Simpler Way to Find Your Files
hereR'sf'-Based Interface to the 'HERE' REST APIs
hergmHierarchical Exponential-Family Random Graph Models
heritabilityMarker-Based Estimation of Heritability Using Individual Plant or Plot Data
heritEWASIdentify Heritable Methylation Marks
HeritSeqHeritability of Gene Expression for Next-Generation Sequencing
hermiteGeneralized Hermite Distribution
hermiterEfficient Sequential and Batch Estimation of Univariate and Bivariate Probability Density Functions and Cumulative Distribution Functions along with Quantiles (Univariate) and Spearman's Correlation (Bivariate)
heroSpatio-Temporal (Hero) Sandwich Smoother
hesimHealth Economic Simulation Modeling and Decision Analysis
HeterFunctionalDataTest of No Main and/or Interaction Effects in Functional Data
HeteroGGMGaussian Graphical Model-Based Heterogeneity Analysis
hetGPHeteroskedastic Gaussian Process Modeling and Design under Replication
HETOPMLE and Bayesian Estimation of Heteroskedastic Ordered Probit (HETOP) Model
hetsurrAssessing Heterogeneity in the Utility of a Surrogate Marker
hettHeteroscedastic t-Regression
hettreatregHeterogeneous Treatment Effects in Regression Analysis
hettxFisherian and Neymanian Methods for Detecting and Measuring Treatment Effect Variation
hetuStructural Handling of Finnish Personal Identity Numbers
heuristicaHeuristics Including Take the Best and Unit-Weight Linear
heuristicsmineRDiscovery of Process Models with the Heuristics Miner
hexbinHexagonal Binning Routines
hexStickerCreate Hexagon Sticker in R
HextractoRIntegrated Tool for Hairping Extraction of RNA Sequences
hextriHexbin Plots with Triangles
hexViewViewing Binary Files
hflightsFlights that departed Houston in 2011
hglassoLearning graphical models with hubs
hglmHierarchical Generalized Linear Models
hglm.dataData for the 'hglm' Package
hgmHolonomic Gradient Method and Gradient Descent
HGMNDHeterogeneous Graphical Model for Non-Negative Data
HGNChelperIdentify and Correct Invalid HGNC Human Gene Symbols and MGI Mouse Gene Symbols
HGSLHeterogeneous Group Square-Root Lasso
hgutilsCollection of Utility Functions
HHStatistical Analysis and Data Display: Heiberger and Holland
hhcartrHHCART(G) - A Reflected Feature Space for CART
HHGHeller-Heller-Gorfine Tests of Independence and Equality of Distributions
hhh4contactsAge-Structured Spatio-Temporal Models for Infectious Disease Counts
hhiCalculate and Visualize the Herfindahl-Hirschman Index
hhsmmHidden Hybrid Markov/Semi-Markov Model Fitting
hhtThe Hilbert-Huang Transform: Tools and Methods
HISimulation from distributions supported by nested hyperplanes
HiCfeatMultiple Logistic Regression for 3D Chromatin Domain Border Analysis
HiClimRHierarchical Climate Regionalization
HiCsegDetection of domains in HiC data
hiddenfThe All-Configurations, Maximum-Interaction F-Test for Hidden Additivity
HiddenMarkovHidden Markov Models
HiDimDAHigh Dimensional Discriminant Analysis
hier.partHierarchical Partitioning
hierarchicalDSFunctions to Perform Hierarchical Analysis of Distance Sampling Data
hierarchicalSetsSet Data Visualization Using Hierarchies
hierbandConvex Banding of the Covariance Matrix
hierbaseEnabling Hierarchical Multiple Testing
hierBipartiteBipartite Graph-Based Hierarchical Clustering
HierDpartPartitioning Hierarchical Diversity and Differentiation Across Metrics and Scales, from Genes to Ecosystems
hierfstatEstimation and Tests of Hierarchical F-Statistics
hierNetA Lasso for Hierarchical Interactions
HierOA graphical user interface for calculating power and sample size for hierarchical data
HierPorfoliosHierarchical Clustering-Based Portfolio Allocation Strategies
HierPortfoliosHierarchical Clustering-Based Portfolio Allocation Strategies
hierSDRHierarchical Sufficient Dimension Reduction
hiertestConvex Hierarchical Testing of Interactions
HIestHybrid index estimation
highcharterA Wrapper for the 'Highcharts' Library
highD2popTwo-Sample Tests for Equality of Means in High Dimension
highDmeanTesting Two-Sample Mean in High Dimension
HighestMedianRulesImplementation of Voting Rules Electing the Candidate with Highest Median Grade
highfrequencyTools for Highfrequency Data Analysis
highlightSyntax Highlighter
highlightHTMLHighlight HTML Text and Tables
highmeanTwo-Sample Tests for High-Dimensional Mean Vectors
highMLRFeature Selection for High Dimensional Survival Data
highrSyntax Highlighting for R Source Code
highriskzoneDetermining and Evaluating High-Risk Zones
highSCREENHigh-Throughput Screening for Plate Based Essays
highTtestSimultaneous Critical Values for t-Tests in Very High Dimensions
higlassoHierarchical Integrative Group LASSO
higradStatistical Inference for Online Learning and Stochastic Approximation via HiGrad
hilbertSimilarityHilbert Similarity Index for High Dimensional Data
hildareadRExtract Variables from HILDA
hilldivIntegral Analysis of Diversity Based on Hill Numbers
hillmakeRPerform occupancy analysis
hillRDiversity Through Hill Numbers
hillshaderCreate Hillshade Relief Maps Using Ray-Tracing
HiLMMEstimation of Heritability in Linear Mixed Models
HIMAHigh-Dimensional Mediation Analysis
himachHigh Mach Finds Routes for Supersonic Aircraft
hindexSimulating the Development of h-Index Values
hindexcalculatorH-Index Calculator using Data from a Web of Science (WoS) Citation Report
hintTools for hypothesis testing based on Hypergeometric Intersection distributions
hiphopParentage Assignment using Bi-Allelic Genetic Markers
hiPODhierarchical Pooled Optimal Design
hipreadRead Hierarchical Fixed Width Files
HiResTECNon-Targeted Fluxomics on High-Resolution Mass-Spectrometry Data
hIRTHierarchical Item Response Theory Models
hisseHidden State Speciation and Extinction
HistDatSummary Statistics for Histogram/Count Data
HistDataData Sets from the History of Statistics and Data Visualization
HistDAWassHistogram-Valued Data Analysis
histmdlA Most Informative Histogram-Like Model
histogramConstruction of Regular and Irregular Histograms with Different Options for Automatic Choice of Bins
HistogramToolsUtility Functions for R Histograms
historydataData Sets for Historians
histryEnhanced Command History Tracking for R Sessions and Dynamic Documents
hitHierarchical Inference Testing
hitandrun"Hit and Run" and "Shake and Bake" for Sampling Uniformly from Convex Shapes
HIV.LifeTablesHIV calibrated model life tables for countries with generalized HIV epidemics
hiveHadoop InteractiVE
HiveR2D and 3D Hive Plots for R
hJAMHierarchical Joint Analysis of Marginal Summary Statistics
HK80Conversion Tools for HK80 Geographical Coordinate System
hkclusteringEnsemble Clustering using K Means and Hierarchical Clustering
hkdatasetsDatasets Related to Hong Kong
hkevpSpatial Extreme Value Analysis with the Hierarchical Model of Reich and Shaby (2012)
hkex.apiAPI to Retrieve Data from Hong Kong Stock Exchange
HKprocessHurst-Kolmogorov Process
hlaRTools for HLA Data
hlidacrAccess Data from the 'Hlídač Státu' API
HLMdiagDiagnostic Tools for Hierarchical (Multilevel) Linear Models
HLSMHierarchical Latent Space Network Model
HMBHierarchical Model-Based Estimation Approach
hmclearnFit Statistical Models Using Hamiltonian Monte Carlo
HMDHFDplusRead Human Mortality Database and Human Fertility Database Data from the Web
hmeasureThe H-Measure and Other Scalar Classification Performance Metrics
hmgmHigh-Dimensional Mixed Graphical Models Estimation
hmiHierarchical Multiple Imputation
HmiscHarrell Miscellaneous
hmlassoLasso with High Missing Rate
HMMHMM - Hidden Markov Models
hmm.discnpHidden Markov Models with Discrete Non-Parametric Observation Distributions
hmmaConstructs Asymmetric Hidden Markov Models
HMMContHidden Markov Model for Continuous Observations Processes
HMMcopulaMarkov Regime Switching Copula Models Estimation and Goodness of Fit
HMMEsolverA Fast Solver for Henderson Mixed Model Equation via Row Operations
HMMextra0sHidden Markov Models with Extra Zeros
hmmmHierarchical Multinomial Marginal Models
HMMmlselectDetermine the Number of States in Hidden Markov Models via Marginal Likelihood
HMMpaAnalysing Accelerometer Data Using Hidden Markov Models
hmmr"Mixture and Hidden Markov Models with R" Datasets and Example Code
HMPHypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP
HMPTreesStatistical Object Oriented Data Analysis of RDP-Based Taxonomic Trees from Human Microbiome Data
HMRFlux Estimation with Static Chamber Data
hmsPretty Time of Day
HmscHierarchical Model of Species Communities
hmstimer'hms' Based Timer
HMVDGroup Association Test using a Hidden Markov Model
hNMFHierarchical Non-Negative Matrix Factorization
hnpHalf-Normal Plots with Simulation Envelopes
hoaHigher Order Likelihood Inference
hoardeRCollect and Retrieve Annotation Data for Various Genomic Data Using Different Webservices
hoardrManage Cached Files
hockeystickDownload and Visualize Essential Climate Change Data
holdemTexas Holdem Simulator
HolidaysHoliday and Half-Day Data, for Use with the 'TimeWarp' Package
hollandStatistics for Holland's Theory of Vocational Choice
holodeckA Tidy Interface for Simulating Multivariate Data
homalsGifi Methods for Optimal Scaling
homeRUseful Functions for Building Physics
HomericDoughnut Plots
hommelMethods for Closed Testing with Simes Inequality, in Particular Hommel's Method
homologeneQuick Access to Homologene and Gene Annotation Updates
homomorpheRHomomorphic Computations in R
homtestHomogeneity tests for Regional Frequency Analysis
hoopRFunctions to Access Men's Basketball Play by Play Data
hopbyhopTransmissions and Receptions in a Hop by Hop Network
hopitHierarchical Ordered Probit Models with Application to Reporting Heterogeneity
HoRMSupplemental Functions and Datasets for "Handbook of Regression Methods"
hornpaHorn's (1965) Test to Determine the Number of Components/Factors
horseruleFlexible Non-Linear Regression with the HorseRule Algorithm
horseshoeImplementation of the Horseshoe Prior
horseshoenlmNonlinear Regression using Horseshoe Prior
hospitalsPortuguese 'NHS' Hospitals
HostSwitchSimulate the Extent of Host Switching by Consumers
hot.deckMultiple Hot Deck Imputation
HotellingHotelling's T^2 Test and Variants
HotellingEllipseHotelling T-Square and Confidence Ellipse
hotspotSoftware Hotspot Analysis
hotspotsHot Spots
housingDataU.S. Housing Data from 2008 to 2016
hoverCSS Animations for 'shiny' Button Elements
howmanyA lower bound for the number of correct rejections
hpaDistributions Hermite Polynomial Approximation
hpackedbubbleCreate Split Packed Bubble Charts
HPbayesHeligman Pollard mortality model parameter estimation using Bayesian Melding with Incremental Mixture Importance Sampling
hpcwldHigh Performance Cluster Models Based on Kiefer-Wolfowitz Recursion
hpiRHouse Price Indexes
HPLBHigh-Probability Lower Bounds for the Total Variance Distance
hpoPlotFunctions for Plotting HPO Terms
hqmiscMiscellaneous convenience functions and dataset
hqregRegularization Paths for Lasso or Elastic-Net Penalized Huber Loss Regression and Quantile Regression
hRToolkit for Data Analytics in Human Resources
hrbrthemesAdditional Themes, Theme Components and Utilities for 'ggplot2'
hrcompriskNonparametric Assessment Between Competing Risks Hazard Ratios
hrIPWHazard Ratio Estimation using Cox Model Weighted by the Estimated Propensity Score
HRMHigh-Dimensional Repeated Measures
HRM.curveHigh-Resolution Melting (HRM) Curve Analysis
hrqglasGroup Variable Selection for Quantile and Robust Mean Regression
hrtHeteroskedasticity Robust Testing
HRWDatasets, Functions and Scripts for Semiparametric Regression Supporting Harezlak, Ruppert & Wand (2018)
HSHomogenous Segmentation for Spatial Lines Data
HSARHierarchical Spatial Autoregressive Model
HSAURA Handbook of Statistical Analyses Using R (1st Edition)
HSAUR2A Handbook of Statistical Analyses Using R (2nd Edition)
HSAUR3A Handbook of Statistical Analyses Using R (3rd Edition)
hscovarCalculation of Covariance Between Markers for Half-Sib Families
hsdarManage, Analyse and Simulate Hyperspectral Data
HSDiCHomogeneity and Sparsity Detection Incorporating Prior Constraint Information
hSDMHierarchical Bayesian Species Distribution Models
hseThe hse Distribution
hsemHierarchical Structural Equation Model
HSEtestHomogeneity of Stratum Effects Test
hsicCCACanonical Correlation Analysis based on Kernel Independence Measures
hsmA Path-Based BCD for Proximal Function of Latent Group Lasso
hsmmHidden Semi Markov Models
hsphasePhasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data
HSPORHidden Smooth Polynomial Regression for Rupture Detection
hsrecombiEstimation of Recombination Rate and Maternal LD in Half-Sibs
hsstanHierarchical Shrinkage Stan Models for Biomarker Selection
htdpHorizontal Time Dependent Positioning
htestClustReweighted Marginal Hypothesis Tests for Clustered Data
HTLRBayesian Logistic Regression with Heavy-Tailed Priors
htm2txtConvert Html into Text
html2RConvert 'HTML' to 'R' with a 'Shiny' App
html5Generates HTML Tag Strings for HTML5 Elements Included in Mozilla's Documentation of HTML5
htmldfSimple Scraping and Tidy Webpage Summaries
htmltabAssemble Data Frames from HTML Tables
htmlTableAdvanced Tables for Markdown/HTML
htmltidyTidy Up and Test XPath Queries on HTML and XML Content
htmltoolsTools for HTML
HTMLUtilsFacilitates Automated HTML Report Creation
htmlwidgetsHTML Widgets for R
htreeHistorical Tree Ensembles for Longitudinal Data
htsHierarchical and Grouped Time Series
HTSClusterClustering High-Throughput Transcriptome Sequencing (HTS) Data
htsrHydro-Meteorology Time-Series
HTSSIPHigh Throughput Sequencing of Stable Isotope Probing Data Analysis
httkHigh-Throughput Toxicokinetics
httpcacheQuery Cache for HTTP Clients
httpcode'HTTP' Status Code Helper
httpgdA 'HTTP' Server Graphics Device
httping'Ping' 'URLs' to Time 'Requests'
httpproblemsReport Errors in Web Applications with 'Problem Details' (RFC 7807)
httpRequestBasic HTTP Request
httptestA Test Environment for HTTP Requests
httpuvHTTP and WebSocket Server Library
httrTools for Working with URLs and HTTP
httr2Perform HTTP Requests and Process the Responses
huesDistinct Colour Palettes Based on 'iwanthue'
hugeHigh-Dimensional Undirected Graph Estimation
HUMcompute HUM value and visualize ROC curves
humanFormatHuman-friendly formatting functions
humaniformatA Parser for Human Names
humanizeCreate Values for Human Consumption
humanleagueSynthetic Population Generator
humidityCalculate Water Vapor Measures from Temperature and Dew Point
hunspellHigh-Performance Stemmer, Tokenizer, and Spell Checker
HuraultMiscGuillem Hurault Functions' Library
hurdlrZero-Inflated and Hurdle Modelling Using Bayesian Inference
hurricaneexposureExplore and Map County-Level Hurricane Exposure in the United States
hutilsMiscellaneous R Functions and Aliases
hutilscppMiscellaneous Functions in C++
huxtableEasily Create and Style Tables for LaTeX, HTML and Other Formats
HW.pvalTesting Hardy-Weinberg Equilibrium for Multiallelic Genes
hwdeModels and Tests for Departure from Hardy-Weinberg Equilibrium and Independence Between Loci
HWEBayesBayesian investigation of Hardy-Weinberg Equilibrium via estimation and testing
HWEintrinsicObjective Bayesian Testing for the Hardy-Weinberg Equilibrium Problem
hwepHardy-Weinberg Equilibrium in Polyploids
hwigHalf-Weight Index Gregariousness
hwordcloudRendering Word Clouds
hwriterHTML Writer - Outputs R objects in HTML format
hwsdrInterface to the 'HWSD' Web Services
hwwntestTests of White Noise using Wavelets
hybridEnsembleBuild, Deploy and Evaluate Hybrid Ensembles
HybridMCImplementation of the Hybrid Monte Carlo and Multipoint Hybrid Monte Carlo sampling techniques
hybridModelsAn R Package for the Stochastic Simulation of Disease Spreading in Dynamic Networks
hybridogramFunction that Creates a Heat Map from Hybridization Data
HydeNetHybrid Bayesian Networks Using R and JAGS
hydraHyperbolic Embedding
hydraulicsBasic Pipe and Open Channel Hydraulics
hydroAppsTools and models for hydrological applications
HydroCodeHydrological Codes
hydroEventsExtract Event Statistics in Hydrologic Time Series
hydrogeoGroundwater Data Presentation and Interpretation
hydroGOFGoodness-of-Fit Functions for Comparison of Simulated and Observed Hydrological Time Series
HydroMeEstimating Water Retention and Infiltration Model Parameters using Experimental Data
hydropeakDetect and Characterize Sub-Daily Flow Fluctuations
hydroPSOParticle Swarm Optimisation, with Focus on Environmental Models
hydroscoperInterface to the Greek National Data Bank for Hydrometeorological Information
hydrostatsHydrologic Indices for Daily Time Series Data
hydrotoolboxHydrological Tools for Handling Hydro-Meteorological Data Records
hydroToolkitHydrological Tools for Handling Hydro-Meteorological Data from Argentina and Chile
hydroTSMTime Series Management, Analysis and Interpolation for Hydrological Modelling
hyfoHydrology and Climate Forecasting
hyper.fitGeneric N-Dimensional Hyperplane Fitting with Heteroscedastic Covariant Errors and Intrinsic Scatter
hyper2The Hyperdirichlet Distribution, Mark 2
HyperbolicDistThe hyperbolic distribution
hypercubeOrganizing Data in Hypercubes
HyperGHypergraphs in R
hypergateMachine Learning of Hyperrectangular Gating Strategies for High-Dimensional Cytometry
hypergeoThe Gauss Hypergeometric Function
HypergeoMatHypergeometric Function of a Matrix Argument
hyperoverlapOverlap Detection in n-Dimensional Space
hypersampleplanAttribute Sampling Plan with Exact Hypergeometric Probabilities using Chebyshev Polynomials
hyperSMURFHyper-Ensemble Smote Undersampled Random Forests
hyperSpecWork with Hyperspectral Data, i.e. Spectra + Meta Information (Spatial, Time, Concentration, ...)
hypervolumeHigh Dimensional Geometry, Set Operations, Projection, and Inference Using Kernel Density Estimation, Support Vector Machines, and Convex Hulls
HyPhyMacroevolutionary phylogentic analysis of species trees and gene trees
hypoRFRandom Forest Two-Sample Tests
hypothesestestConfidence Intervals and Tests of Statistical Hypotheses
hypothesisrWrapper for the 'Hypothes.is' Web Annotation Service
hyprHypothesis Matrix Translation
HyRiMMulticriteria Risk Management using Zero-Sum Games with Vector-Valued Payoffs that are Probability Distributions
HYRISKHybrid Methods for Addressing Uncertainty in RISK Assessments
hySpc.testthat'testthat' Unit Test Enhancements
hysteresisTools for Modeling Rate-Dependent Hysteretic Processes and Ellipses
hystReetGet Pedestrian Frequency Data from the 'Hystreet' Project
hzarHybrid Zone Analysis using R
i2dashIterative and Interactive Dashboards
i2extrasFunctions to Work with 'incidence2' Objects
IAbinPlotting N-T Plane for Decision on Performing an Interim Analysis
IAcsSPCRData and Functions for "An Intro. to Accept. Samp. & SPC/R"
iAdaptTwo-Stage Adaptive Dose-Finding Clinical Trial Design
iadfAnalysis of Intra Annual Density Fluctuations
iaiInterface to 'Interpretable AI' Modules
ialiquorMonthly Iowa Liquor Sales Summary
iARIrregularly Observed Autoregressive Models
iarmItem Analysis in Rasch Models
IASDModel Selection for Index of Asymmetry Distribution
IATCleaning and Visualizing Implicit Association Test (IAT) Data
IATanalyticsCompute Effect Sizes and Reliability for Implicit Association Test (IAT) Data
IATScoreScoring Algorithm for the Implicit Association Test (IAT)
IATscoresImplicit Association Test Scores Using Robust Statistics
ibBias Correction via Iterative Bootstrap
iBATCGHIntegrative Bayesian Analysis of Transcriptomic and CGH Data
ibawdsFunctions and Datasets for the Data Science Course at IBAW
ibbR Wrapper for Istanbul Municipality Open Data Portal
IBCF.MTMEItem Based Collaborative Filtering for Multi-Trait and Multi-Environment Data
ibdIncomplete Block Designs
IBDhaploRtoolsFunctions for the Analysis of IBD Haplo Output
IBDLabelsConvert Between Different IBD-State Labelling Schemes
ibdregRegression Methods for IBD Linkage with Covariates
IBDsimSimulation of Chromosomal Regions Shared by Family Members
ibdsim2Simulation of Chromosomal Regions Shared by Family Members
ibeemdIrregular-lattice based ensemble empirical mode decomposition
ibeliefBelief Function Implementation
ibmIndividual Based Models in R
ibmAcousticRConnect to Your 'IBM Acoustic' Data
ibmcraftrToolkits to Develop Individual-Based Models in Infectious Disease
ibmdbRIBM in-Database Analytics for R
IBMPopSimIndividual Based Model Population Simulation
ibmsunburstGenerate Personality Insights Sunburst Diagrams
IbootIboot: iterated bootstrap tests and confidence sets
ibrIterative Bias Reduction
iBreakDownModel Agnostic Instance Level Variable Attributions
IBrokersR API to Interactive Brokers Trader Workstation
ibsIntegral of B-Spline Functions
iBSTImproper Bagging Survival Tree
ic.inferInequality Constrained Inference in Linear Normal Situations
iC10A Copy Number and Expression-Based Classifier for Breast Tumours
iC10TrainingDataTraining Datasets for iC10 Package
IC2Inequality and Concentration Indices and Curves
ic50Standardized high-throughput evaluation of cell-based compound screens
icaIndependent Component Analysis
ICAFFImperialist Competitive Algorithm
ical'iCalendar' Parsing
iCAMPInfer Community Assembly Mechanisms by Phylogenetic-Bin-Based Null Model Analysis
ICAMSIn-Depth Characterization and Analysis of Mutational Signatures ('ICAMS')
ICAODOptimal Designs for Nonlinear Statistical Models by Imperialist Competitive Algorithm (ICA)
icapcaMixed ICA/PCA
iCARHIntegrative Conditional Autoregressive Horseshoe Model
icarusCalibrates and Reweights Units in Samples
ICBayesBayesian Semiparametric Models for Interval-Censored Data
ICBioMarkData-Driven Design of Targeted Gene Panels for Estimating Immunotherapy Biomarkers
ICCFacilitating Estimation of the Intraclass Correlation Coefficient
ICC.Sample.SizeCalculation of Sample Size and Power for ICC
ICcalibCox Model with Interval-Censored Starting Time of a Covariate
iccbetaMultilevel Model Intraclass Correlation for Slope Heterogeneity
ICCbinFacilitates Clustered Binary Data Generation, and Estimation of Intracluster Correlation Coefficient (ICC) for Binary Data
iccCountsIntraclass Correlation Coefficient for Count Data
iccdeComputation of the Double-Entry Intraclass Correlation
ICcforestAn Ensemble Method for Interval-Censored Survival Data
icd.dataInternational Classifcation of Diseases (ICD) Data
ICD10gmMetadata Processing for the German Modification of the ICD-10 Coding System
icdGLMEM by the Method of Weights for Incomplete Categorical Data in Generlized Linear Models
icdpicr'ICD' Programs for Injury Categorization in R
ICDSIdentification of Cancer Dysfunctional Subpathway with Omics Data
ICEIterated Conditional Expectation
ICEboxIndividual Conditional Expectation Plot Toolbox
icecreamPrint Debugging Made Sweeter
ICEinferIncremental Cost-Effectiveness Inference using Two Unbiased Samples
iCellRAnalyzing High-Throughput Single Cell Sequencing Data
icenRegRegression Models for Interval Censored Data
icensBKLAccompanion to the Book on Interval Censoring by Bogaerts, Komarek, and Lesaffre
icensmisStudy Design and Data Analysis in the Presence of Error-Prone Diagnostic Tests and Self-Reported Outcomes
icesAdviceFunctions Related to ICES Advice
icesDatrasDATRAS Trawl Survey Database Web Services
icesTAFFunctions to Support the ICES Transparent Assessment Framework
icesVocabICES Vocabularies Database Web Services
ICGEEstimation of Number of Clusters and Identification of Atypical Units
ICglmInformation Criteria for Generalized Linear Regression
ICGORFit Generalized Odds Rate Hazards Model with Interval Censored Data
ichimokuVisualization and Tools for Ichimoku Kinko Hyo Strategies
iCiteRA Minimal Wrapper Around NIH's 'iCite' API
iClickA Button-Based GUI for Financial and Economic Data Analysis
iClusterIntegrative clustering of multiple genomic data types
icmmEmpirical Bayes Variable Selection via ICM/M Algorithm
ICODSData Analysis for ODS and Case-Cohort Designs with Interval-Censoring
iconrGraphical and Spatial Analysis for Prehistoric Iconography
icosaGlobal Triangular and Penta-Hexagonal Grids Based on Tessellated Icosahedra
icpsrdataReproducible Data Retrieval from the ICPSR Archive
icrCompute Krippendorff's Alpha
ICRanksSimultaneous Confidence Intervals for Ranks
icrfInterval Censored Recursive Forests
icRSFA Modified Random Survival Forest Algorithm
ICSTools for Exploring Multivariate Data via ICS/ICA
ICSKATInterval-Censored Sequence Kernel Association Test
ICSNPTools for Multivariate Nonparametrics
ICSOutlierOutlier Detection Using Invariant Coordinate Selection
ICSSICSS Algorithm by Inclan/Tiao (1994)
ICSShinyICS via a Shiny Application
ICsurvA package for semiparametric regression analysis of interval-censored data
icswInverse Compliance Score Weighting
ICtestEstimating and Testing the Number of Interesting Components in Linear Dimension Reduction
ICVIndirect Cross-Validation (ICV) for Kernel Density Estimation
ICvectorfieldsVector Fields from Spatial Time Series of Population Abundance
idarIndividual Diversity-Area Relationships
idbgR debugger
idbrR Interface to the US Census Bureau International Data Base API
IDCardUpdate Chinese ID Card Number to Eighteen Digits
IDEIntegro-Difference Equation Spatio-Temporal Models
ideamdbEasy Manipulation of IDEAM's Climatological Data
idefixEfficient Designs for Discrete Choice Experiments
idemInference in Randomized Controlled Trials with Death and Missingness
idendr0Interactive Dendrograms
identityJacquard Condensed Coefficients of Identity
ideqBayesian Dynamic Spatio-Temporal Models, Including the Integrodifference Equation Model
iderVarious Methods for Estimating Intrinsic Dimension
IDetectIsolate-Detect Methodology for Multiple Change-Point Detection
IDFEstimation and Plotting of IDF Curves
iDINGOIntegrative Differential Network Analysis in Genomics
idiogramFISHShiny App. Idiograms with Marks and Karyotype Indices
idmIncremental Decomposition Methods
IDmeasurerAssessment of Individual Identity in Animal Signals
IDminingIntrinsic Dimension for Data Mining
idmodelrInfectious Disease Model Library and Utilities
idmTPregRegression Model for Progressive Illness Death Data
iDOSIntegrated Discovery of Oncogenic Signatures
iDOVEDurability of Vaccine Efficacy Against SARS-CoV-2 Infection
IDPmisc'Utilities of Institute of Data Analyses and Process Design (www.zhaw.ch/idp)'
IDPSurvivalImprecise Dirichlet Process for Survival Analysis
idrIrreproducible discovery rate
idsGenerate Random Identifiers
IDSAAn Interactive Detector for Spatial Associations
IDSL.IPAIntrinsic Peak Analysis for LC-MS Data
IDSpatialStatsEstimate Global Clustering in Infectious Disease
idx2rConvert Files to and from IDX Format to Vectors, Matrices and Arrays
iDynoRR Analysis package for iDynoMiCS Simulation Results
ie2miscIrucka Embry's Miscellaneous USGS Functions
ieeeroundFunctions to set and get the IEEE rounding mode
iemiscIrucka Embry's Miscellaneous Functions
iemiscdataIrucka Embry's Miscellaneous Data Collection
iemisctextIrucka Embry's Miscellaneous Text Collection
IETDInter-Event Time Definition
ifaIndependent Factor Analysis
IFAARobust Inference for Absolute Abundance in Microbiome Analysis
iFadAn integrative factor analysis model for drug-pathway association inference
ifaToolsToolkit for Item Factor Analysis with 'OpenMx'
IFCTools for Imaging Flow Cytometry
ifctoolsItalian Fiscal Code ('Codice Fiscale') Utilities
iForecastMachine Learning Time Series Forecasting
IFPIdentifying Functional Polymorphisms
ifsIterated Function Systems
ifultoolsInsightful Research Tools
ig.vancouver.2014.topcolourInstagram 2014 Vancouver Top Colour Dataset
IgAScoresScore Taxon-Level IgA Binding in IgA-Seq Experiments
iGassoStatistical Tests and Utilities for Genetic Association
igateGuided Analytics for Testing Manufacturing Parameters
igcopComputational Tools for the IG and IGL Copula Families
IGGInverse Gamma-Gamma
igluInterpreting Glucose Data from Continuous Glucose Monitors
igoRIntergovernmental Organizations Database
IGPInterchangeable Gaussian Process Models
igraphNetwork Analysis and Visualization
igraphdataA Collection of Network Data Sets for the 'igraph' Package
igraphinshinyUse 'shiny' to Demo 'igraph'
iGraphMatchTools for Graph Matching
igraphtosoniaConvert iGraph graps to SoNIA .son files
iGSEAIntegrative Gene Set Enrichment Analysis Approaches
IGSTInformative Gene Selection Tool
iheatmaprInteractive, Complex Heatmaps
iheiddownFor Writing Graduate Institute Geneva Documents
ihpdrDownload Data from the International House Price Database
IHSEPInhomogeneous Self-Exciting Process
iilassoIndependently Interpretable Lasso
iIneqComputing Individual Components of the Gini and the Theil Indices
IIVpredictorModeling Within Individual Variability as Predictor
ijtiffComprehensive TIFF I/O with Full Support for 'ImageJ' TIFF Files
ilcLee-Carter Mortality Models using Iterative Fitting Algorithms
ILSInterlaboratory Study
imabcIncremental Mixture Approximate Bayesian Computation (IMABC)
IMAGEIntegrated Methylation QTL Mapping and Allele-Specific Analysis
image.binarizationBinarize Images for Enhancing Optical Character Recognition
image.CannyEdgesImplementation of the Canny Edge Detector for Images
image.ContourDetectorImplementation of the Unsupervised Smooth Contour Line Detection for Images
image.CornerDetectionF9Find Corners in Digital Images with FAST-9
image.CornerDetectionHarrisImplementation of the Harris Corner Detection for Images
image.dlibImage Processing Functionality using the 'dlib' Package
image.libfacedetectionConvolutional Neural Network for Face Detection
image.LineSegmentDetectorDetect Line Segments in Images
image.OtsuOtsu's Image Segmentation Method
image.textlinedetectorSegment Images in Text Lines and Words
imageDataAids in Processing and Plotting Data from a Lemna-Tec Scananalyzer
imagefluencyImage Statistics Based on Processing Fluency
imagefxExtract Features from Images
imagerImage Processing Library Based on 'CImg'
imagerExtraExtra Image Processing Library Based on 'imager'
imageviewerSimple 'htmlwidgets' Image Viewer with WebGL Brightness/Contrast
imagineIMAGing engINEs, Tools for Application of Image Filters to Data Matrices
ImaginRDelimit and Characterize Color Phenotype of the Pearl Oyster
IMakItem Maker
ImapInteractive Mapping
imbalancePreprocessing Algorithms for Imbalanced Datasets
imbibeA Pipe-Friendly Image Calculator
imcExperimentMass Cytometry S4 Class Structure Pipeline for Images
IMDIndex of Multiple Deprivation Data for the UK
imdbapiGet Movie, Television Data from the 'imdb' Database
IMECIsing Model of Explanatory Coherence
iMediateLikelihood Methods for Mediation Analysis
IMFDataR Interface for International Monetary Fund(IMF) Data API
imfrDownload Data from the International Monetary Fund's Data API
imgpalrCreate Color Palettes from Images
imgrecAn Interface for Image Recognition
imguRAn Imgur.com API Client Package
IMIFAInfinite Mixtures of Infinite Factor Analysers and Related Models
IMIXGaussian Mixture Model for Multi-Omics Data Integration
imlInterpretable Machine Learning
IMmailgunSend Emails using 'Mailgun'
immcpCandidate Prescriptions Discovery Based on Pathway Fingerprint
immerItem Response Models for Multiple Ratings
ImmigrateIterative Max-Min Entropy Margin-Maximization with Interaction Terms for Feature Selection
immunarchBioinformatics Analysis of T-Cell and B-Cell Immune Repertoires
immuneSIMTunable Simulation of B- And T-Cell Receptor Repertoires
imolaCSS Layouts (Grid and Flexbox) Implementation for R/Shiny
IMPInteractive Model Performance Evaluation
imp4pImputation for Proteomics
IMPACTThe Impact of Items
ImpactEffectsizeCalculation and Visualization of the Impact Effect Size Measure
impactfluQuantification of Population-Level Impact of Vaccination
impactrMechanical Loading Prediction Through Accelerometer Data
impimpImprecise Imputation for Statistical Matching
implicitMeasuresCompute Scores for Different Implicit Measures
impliedConvert Between Bookmaker Odds and Probabilities
implyrR Interface for Apache Impala
importAn Import Mechanism for R
importarEnables Importing/Loading of Packages or Functions While Creating an Alias for Them
ImportExportImport and Export Data
importinegiDownload and Manage Open Data from INEGI
impressionist.colorsImpressionism's Color Palettes
imptreeClassification Trees with Imprecise Probabilities
imputeFinImputation of Financial Time Series with Missing Values and/or Outliers
imputeLCMDA collection of methods for left-censored missing data imputation
imputeMDRThe Multifactor Dimensionality Reduction (MDR) Analysis for Incomplete Data
imputeMissingsImpute Missing Values in a Predictive Context
imputeMultiImputation Methods for Multivariate Multinomial Data
imputePSFImpute Missing Data in Time Series Data with PSF Based Method
imputeRA General Multivariate Imputation Framework
ImputeRobustRobust Multiple Imputation with Generalized Additive Models for Location Scale and Shape
imputeTestbenchTest Bench for the Comparison of Imputation Methods
imputeTSTime Series Missing Value Imputation
imputeYnImputing the Last Largest Censored Observation(s) Under Weighted Least Squares
iMRMCMulti-Reader, Multi-Case Analysis Methods (ROC, Agreement, and Other Metrics)
imsigImmune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours
IMTestInformation Matrix Test for Generalized Partial Credit Models
in2extRemesInto the extRemes Package
inaparcInitialization Algorithms for Partitioning Cluster Analysis
inbreedRAnalysing Inbreeding Based on Genetic Markers
incaInteger Calibration
incasePipe-Friendly Vector Replacement with Case Statements
INCATomeInternal Control Analysis of Translatome Studies by Microarrays
IncDTWIncremental Calculation of Dynamic Time Warping
incgraphIncremental Graphlet Counting for Network Optimisation
incidenceCompute, Handle, Plot and Model Incidence of Dated Events
incidence2Compute, Handle and Plot Incidence of Dated Events
incidentalImplements Empirical Bayes Incidence Curves
IncomPairComparison of Means for the Incomplete Paired Data
incRAnalysis of Incubation Data
inctoolsIncidence Estimation Tools
indelmissInsertion Deletion Analysis While Accounting for Possible Missing Data
independenceFast Rank-Based Independence Testing
IndepTestNonparametric Independence Tests Based on Entropy Estimation
IndexConstructionIndex Construction for Time Series Data
IndexNumberIndex Numbers in Social Sciences
IndexNumRIndex Number Calculation
IndianTaxCalcIndian Income Tax Calculator
indicspeciesRelationship Between Species and Groups of Sites
indiedownIndividual R Markdown Templates
indirectElicitation of Independent Conditional Means Priors for Generalised Linear Models
InDiscObtaining and Estimating Unidimensional and Multidimensional IRT Dual Models
individualFramework for Specifying and Simulating Individual Based Models
IndTestPPTests of Independence and Analysis of Dependence Between Point Processes in Time
industRialData, Functions and Support Materials from the Book "industRial Data Science"
inegiRIntegrate INEGI’s (Mexican Stats Office) API with R
ineqMeasuring Inequality, Concentration, and Poverty
ineqJDInequality Joint Decomposition
iNEXTInterpolation and Extrapolation for Species Diversity
InfDimInfine-dimensional model (IDM) to analyse phenotypic variation in growth trajectories
inferTidy Statistical Inference
inferenceFunctions to extract inferential values of a fitted model object
InferenceSMRInference about the standardized mortality ratio when evaluating the effect of a screening program on survival
inferferenceMethods for Causal Inference with Interference
inferrInferential Statistics
infinitefactorBayesian Infinite Factor Models
InfiniumPurifyEstimate and Account for Tumor Purity in Cancer Methylation Data Analysis
infixBasic Infix Binary Operators
InflationCore Inflation
InflectMelt Curve Fitting and Melt Shift Analysis
inflectionFinds the Inflection Point of a Curve
influence.METools for Detecting Influential Data in Mixed Effects Models
influence.SEMCase Influence in Structural Equation Models
influenceAUCIdentify Influential Observations in Binary Classification
influenceRSoftware Tools to Quantify Structural Importance of Nodes in a Network
influentialIdentification and Classification of the Most Influential Nodes
influxdbclientInfluxDB 2.x Client for R
influxdbrR Interface to InfluxDB
infoDecompuTEInformation Decomposition of Two-Phase Experiments
InformationData Exploration with Information Theory (Weight-of-Evidence and Information Value)
InformationValuePerformance Analysis and Companion Functions for Binary Classification Models
InformativeCensoringMultiple Imputation for Informative Censoring
informedSenSensitivity Analysis Informed by a Test for Bias
informRSequence Statistics for Relational Event Models
infotheoInformation-Theoretic Measures
InfoTradCalculates the Probability of Informed Trading (PIN)
infraAn Infrastructure Proxy Function
infraFDTD.assistIO Help for infraFDTD Model
InfusionInference Using Simulation
infutilInformation Utility
ingredientsEffects and Importances of Model Ingredients
iniRead and Write '.ini' Files
injectoRR Dependency Injection
InjurySeverityScoreTranslate ICD-9 into Injury Severity Score
INLABMABayesian Model Averaging with INLA
inlabruBayesian Latent Gaussian Modelling using INLA and Extensions
inldataCollection of Datasets for the USGS-INL Aquifer Monitoring Networks
inlineFunctions to Inline C, C++, Fortran Function Calls from R
inlinedocsConvert Inline Comments to Documentation
inlmiscMiscellaneous Functions for the USGS INL Project Office
innsightGet the Insights of your Neural Network
inopsInfix Operators for Detection, Subsetting and Replacement
inpdfrAnalyse Text Documents Using Ecological Tools
inplaceIn-place Operators for R
InPositionInference Tests for ExPosition
INQCQuality Control of Climatological Daily Time Series
insaneINsulin Secretion ANalysEr
insectInformatic Sequence Classification Trees
inseeTools to Easily Download Data from INSEE BDM Database
insiderTradesTools to Download Insider Transactions and Holdings
insightEasy Access to Model Information for Various Model Objects
InSilicoVAProbabilistic Verbal Autopsy Coding with 'InSilicoVA' Algorithm
insolSolar Radiation
InspectChangepointHigh-Dimensional Changepoint Estimation via Sparse Projection
inspectdfInspection, Comparison and Visualisation of Data Frames
inspectorValidation of Arguments and Objects in User-Defined Functions
INSPIREInferring Shared Modules from Multiple Gene Expression Datasets with Partially Overlapping Gene Sets
install.loadCheck, Install and Load CRAN & USGS GRAN Packages
installrUsing R to Install Stuff on Windows OS (Such As: R, 'Rtools', 'RStudio', 'Git', and More!)
instaRAccess to Instagram API via R
insuranceDataA Collection of Insurance Datasets Useful in Risk Classification in Non-life Insurance
insuranceratingAnalytic Insurance Rating Techniques
intamapProcedures for Automated Interpolation
IntCalRadiocarbon Calibration Curves
intccrSemiparametric Competing Risks Regression under Interval Censoring
intcensROCAUC Estimation of Interval Censored Survival Data
intdagReconstruction of a Directed Acyclic Graph with Interventions
integIRTyIntegrating Multiple Modalities of High Throughput Assays Using Item Response Theory
integrAn Implementation of Interaction Graphs of Aleks Jakulin
IntegrateBsIntegration for B-Spline
IntegratedJMJoint Modeling of the Gene-Expression and Bioassay Data, Taking Care of the Effect Due to a Fingerprint Feature
IntegratedMRFIntegrated Prediction using Uni-Variate and Multivariate Random Forests
intensegRidR Wrapper for the Carbon Intensity API
intensity.analysisIntensity of Change for Comparing Categorical Maps from Sequential Intervals
inteParetoIntegrative Analysis of RNA-Seq and ChIP-Seq Data
interacCircosThe Visualization of Interactive Circos Plot
InteractTests for marginal interactions in a 2 class response model
interactionRFull Reporting of Interaction Analyses
interactionsComprehensive, User-Friendly Toolkit for Probing Interactions
interactionTestCalculates Critical Test Statistics to Control False Discovery Rates in Marginal Effects Plots
InteractiveIGraphinteractive network analysis and visualization
InteratrixCompute Chi-Square Measures with Corrections
interepInteraction Analysis of Repeated Measure Data
InterfaceqPCRGUI to Analyse qPCR Results after PMA Treatment or not
interferenceCIExact Confidence Intervals in the Presence of Interference
interflexMultiplicative Interaction Models Diagnostics and Visualization
interfrInterference Color Charts for Polarized Light Microscopy
intergraphCoercion Routines for Network Data Objects
interimScheduling Interim Analyses in Clinical Trials
interimAppApp for Scheduling Interim Analyses in Clinical Trials
interleaveConverts Tabular Data to Interleaved Vectors
interlineaRImporting Interlinearized Corpora and Dictionaries as Produced by Descriptive Linguistics Software
interpInterpolation Methods
interplotPlot the Effects of Variables in Interaction Terms
Interpol.THourly interpolation of multiple temperature daily series
interpretFit Interpretable Machine Learning Models
InterpretMSSpectrumInterpreting High Resolution Mass Spectra
interpretRBinary Classifier and Regression Model Interpretation Functions
InterSIMSimulation of Inter-Related Genomic Datasets
InterVA4Replicate and Analyse 'InterVA4'
InterVA5Replicate and Analyse 'InterVA5'
intervalWeighted Logrank Tests and NPMLE for Interval Censored Data
intervalaverageTime-Weighted Averaging for Interval Data
intervalsTools for Working with Points and Intervals
IntervalSurgeonOperating on Integer-Bounded Intervals
intervcompHypothesis Testing Using the Overlapping Interval Estimates
interventionalDBNInterventional Inference for Dynamic Bayesian Networks
inTextSummaryTableCreation of in-Text Summary Table
intiTools and Statistical Procedures in Plant Science
intkrigeA Numerical Implementation of Interval-Valued Kriging
IntLikNumerical Integration for Integrated Likelihood
intmedMediation Analysis using Interventional Effects
IntNMFIntegrative Clustering of Multiple Genomic Dataset
inTreesInterpret Tree Ensembles
intRegGOFIntegrated Regression Goodness of Fit
INTRIGUEQuantify and Control Reproducibility in High-Throughput Experiments
intrinsicDimensionIntrinsic Dimension Estimation
introgressmethods for analyzing introgression between divergent lineages
intrvalRelational Operators for Intervals
intRvalsAnalysis of Time-Ordered Event Data with Missed Observations
intsurvIntegrative Survival Modeling
intsurvbinSurvival and Binary Data Integration