Available CRAN Packages By Date of Publication

Date	Package	Title
2018-12-11	animation	A Gallery of Animations in Statistics and Utilities to Create Animations
2018-12-11	ANN2	Artificial Neural Networks for Anomaly Detection
2018-12-11	BIFIEsurvey	Tools for Survey Statistics in Educational Assessment
2018-12-11	CrossVA	Verbal Autopsy Data Transform for Use with Various Coding Algorithms
2018-12-11	cubature	Adaptive Multivariate Integration over Hypercubes
2018-12-11	extremefit	Estimation of Extreme Conditional Quantiles and Probabilities
2018-12-11	geogrid	Turn Geospatial Polygons into Regular or Hexagonal Grids
2018-12-11	httr	Tools for Working with URLs and HTTP
2018-12-11	jmv	The 'jamovi' Analyses
2018-12-11	lpirfs	Local Projections Impulse Response Functions
2018-12-11	mdsstat	Statistical Trending for Medical Devices Surveillance
2018-12-11	miceadds	Some Additional Multiple Imputation Functions, Especially for 'mice'
2018-12-11	MKmisc	Miscellaneous Functions from M. Kohl
2018-12-11	MoEClust	Gaussian Parsimonious Clustering Models with Covariates
2018-12-11	pbdDMAT	'pbdR' Distributed Matrix Methods
2018-12-11	photobiology	Photobiological Calculations
2018-12-11	readr	Read Rectangular Text Data
2018-12-11	RNAsmc	RNA Secondary Structure Module Mining, Comparison and Plotting
2018-12-11	rSPARCS	Statistical Package for Analysis Related Cleaning Support
2018-12-11	RTest	A XML-Based Testing Framework for Automated Component Tests of R Packages
2018-12-11	smoothr	Smooth and Tidy Spatial Features
2018-12-11	wrapr	Wrap R Tools for Debugging and Parametric Programming
2018-12-10	antaresProcessing	'Antares' Results Processing
2018-12-10	balance	Visualize Balances of Compositional Data
2018-12-10	bivariate	Bivariate Probability Distributions
2018-12-10	bnviewer	Interactive Visualization of Bayesian Networks
2018-12-10	callr	Call R from R
2018-12-10	ClimProjDiags	Set of Tools to Compute Various Climate Indices
2018-12-10	ClusterR	Gaussian Mixture Models, K-Means, Mini-Batch-Kmeans, K-Medoids and Affinity Propagation Clustering
2018-12-10	ddalpha	Depth-Based Classification and Calculation of Data Depth
2018-12-10	drake	A Pipeline Toolkit for Reproducible Computation at Scale
2018-12-10	erhcv	Equi-Rank Hierarchical Clustering Validation
2018-12-10	FNN	Fast Nearest Neighbor Search Algorithms and Applications
2018-12-10	frailtypack	General Frailty Models: Shared, Joint and Nested Frailty Models with Prediction; Evaluation of Failure-Time Surrogate Endpoints
2018-12-10	ggimage	Use Image in 'ggplot2'
2018-12-10	GPareto	Gaussian Processes for Pareto Front Estimation and Optimization
2018-12-10	immer	Item Response Models for Multiple Ratings
2018-12-10	jmvcore	Dependencies for the 'jamovi' Framework
2018-12-10	knitr	A General-Purpose Package for Dynamic Report Generation in R
2018-12-10	lessR	Less Code, More Results
2018-12-10	loon	Interactive Statistical Data Visualization
2018-12-10	mds	Medical Devices Surveillance
2018-12-10	metansue	Meta-Analysis of Studies with Non-Statistically Significant Unreported Effects
2018-12-10	mistr	Mixture and Composite Distributions
2018-12-10	mudfold	Multiple UniDimensional unFOLDing
2018-12-10	Partiallyoverlapping	Partially Overlapping Samples t-Tests
2018-12-10	prism	Access Data from the Oregon State Prism Climate Project
2018-12-10	RANN.L1	Fast Nearest Neighbour Search (Wraps ANN Library) Using L1 Metric
2018-12-10	Rcan	Cancer Registry Data Analysis and Visualisation
2018-12-10	rEDM	Applications of Empirical Dynamic Modeling from Time Series
2018-12-10	RQuantLib	R Interface to the 'QuantLib' Library
2018-12-10	RxODE	Facilities for Simulating from ODE-Based Models
2018-12-10	sommer	Solving Mixed Model Equations in R
2018-12-10	TAM	Test Analysis Modules
2018-12-10	visdat	Preliminary Visualisation of Data
2018-12-09	ChemoSpec2D	Exploratory Chemometrics for 2D Spectroscopy
2018-12-09	COMPoissonReg	Conway-Maxwell Poisson (COM-Poisson) Regression
2018-12-09	dials	Tools for Creating Tuning Parameter Values
2018-12-09	DiPs	Directional Penalties for Optimal Matching in Observational Studies
2018-12-09	DJL	Distance Measure Based Judgment and Learning
2018-12-09	iptools	Manipulate, Validate and Resolve 'IP' Addresses
2018-12-09	LinkedGASP	Linked Emulator of a Coupled System of Simulators
2018-12-09	LSDsensitivity	Sensitivity Analysis Tools for LSD
2018-12-09	measurements	Tools for Units of Measurement
2018-12-09	multiRDPG	Multiple Random Dot Product Graphs
2018-12-09	NTS	Nonlinear Time Series Analysis
2018-12-09	openCR	Open Population Capture-Recapture
2018-12-09	OpenImageR	An Image Processing Toolkit
2018-12-09	optionstrat	Utilizes the Black-Scholes Option Pricing Model to Perform Strategic Option Analysis and Plot Option Strategies
2018-12-09	parglm	Parallel GLM
2018-12-09	pedigreeTools	Versatile Functions for Working with Pedigrees
2018-12-09	ProjectManagement	Management of Deterministic and Stochastic Projects
2018-12-09	PSTR	Panel Smooth Transition Regression Modelling
2018-12-09	radix	'R Markdown' Format for Scientific and Technical Writing
2018-12-09	RCarb	Dose Rate Modelling of Carbonate-Rich Samples
2018-12-09	smurf	Sparse Multi-Type Regularized Feature Modeling
2018-12-09	ssmrob	Robust Estimation and Inference in Sample Selection Models
2018-12-09	streamR	Access to Twitter Streaming API via R
2018-12-09	transformr	Polygon and Path Transformations
2018-12-09	uavRst	Unmanned Aerial Vehicle Remote Sensing Tools
2018-12-09	UCSCXenaTools	Download and Explore Datasets from UCSC Xena Data Hubs
2018-12-09	udpipe	Tokenization, Parts of Speech Tagging, Lemmatization and Dependency Parsing with the 'UDPipe' 'NLP' Toolkit
2018-12-09	viewshed3d	Compute Viewshed in 3D Terrestrial Laser Scanner Scenes of Ecosystems
2018-12-08	automl	Deep Learning with Metaheuristic
2018-12-08	CholWishart	Cholesky Decomposition of the Wishart Distribution
2018-12-08	cNORM	Continuous Norming
2018-12-08	depmix	Dependent Mixture Models
2018-12-08	dynamac	Dynamic Simulation and Testing for Single-Equation ARDL Models
2018-12-08	exams	Automatic Generation of Exams in R
2018-12-08	gamlss.dist	Distributions for Generalized Additive Models for Location Scale and Shape
2018-12-08	ggstatsplot	'ggplot2' Based Plots with Statistical Details
2018-12-08	IsoplotR	Statistical Toolbox for Radiometric Geochronology
2018-12-08	landscapemetrics	Landscape Metrics for Categorical Map Patterns
2018-12-08	mdsOpt	Searching for Optimal MDS Procedure for Metric and Interval-Valued Data
2018-12-08	mudata2	Interchange Tools for Multi-Parameter Spatiotemporal Data
2018-12-08	OSDR	Finds an Optimal System of Distinct Representatives
2018-12-08	palm	Fitting Point Process Models via the Palm Likelihood
2018-12-08	pbdBASE	Programming with Big Data – Base Wrappers for Distributed Matrices
2018-12-08	R2STATS	A GTK GUI for Fitting and Comparing GLM and GLMM
2018-12-08	Rdrools	A Rules Engine Based on 'Drools'
2018-12-08	rmarkdown	Dynamic Documents for R
2018-12-08	rPraat	Interface to Praat
2018-12-08	rscala	Bridge Between 'R' and 'Scala' with Callbacks
2018-12-08	rtk	Rarefaction Tool Kit
2018-12-08	totalcensus	Extract Decennial Census and American Community Survey Data
2018-12-07	ammistability	Additive Main Effects and Multiplicative Interaction Model Stability Parameters
2018-12-07	auk	eBird Data Extraction and Processing in R
2018-12-07	beadplexr	Analysis of Multiplex Cytometric Bead Assays
2018-12-07	eiPack	Ecological Inference and Higher-Dimension Data Management
2018-12-07	FENmlm	Fixed Effects Nonlinear Maximum Likelihood Models
2018-12-07	float	32-Bit Floats
2018-12-07	gimms	Download and Process GIMMS NDVI3g Data
2018-12-07	httptest	A Test Environment for HTTP Requests
2018-12-07	icesAdvice	Functions Related to ICES Advice
2018-12-07	icesTAF	Functions to Support the ICES Transparent Assessment Framework
2018-12-07	jsonify	Converts 'R' Objects to Javascript Object Notation (JSON)
2018-12-07	jsonlite	A Robust, High Performance JSON Parser and Generator for R
2018-12-07	laGP	Local Approximate Gaussian Process Regression
2018-12-07	lomb	Lomb-Scargle Periodogram
2018-12-07	lwgeom	Bindings to Selected 'liblwgeom' Functions for Simple Features
2018-12-07	markdown	'Markdown' Rendering for R
2018-12-07	MCI2	Market Area Models for Retail and Service Locations
2018-12-07	parmsurvfit	Parametric Models for Survival Data
2018-12-07	pkgdown	Make Static HTML Documentation for a Package
2018-12-07	secrdesign	Sampling Design for Spatially Explicit Capture-Recapture
2018-12-07	serial	The Serial Interface Package
2018-12-07	shadowtext	Shadow Text Grob and Layer
2018-12-07	ShinyItemAnalysis	Test and Item Analysis via Shiny
2018-12-07	tcgsaseq	Time-Course Gene Set Analysis for RNA-Seq Data
2018-12-07	TreeSearch	Phylogenetic Tree Search Using Custom Optimality Criteria
2018-12-07	VARSEDIG	An Algorithm for Morphometric Characters Selection and Statistical Validation in Morphological Taxonomy
2018-12-07	WDI	World Development Indicators (World Bank)
2018-12-06	CARBayes	Spatial Generalised Linear Mixed Models for Areal Unit Data
2018-12-06	ChainLadder	Statistical Methods and Models for Claims Reserving in General Insurance
2018-12-06	classyfireR	R Interface to the ClassyFire RESTful API
2018-12-06	clordr	Composite Likelihood Inference and Diagnostics for Replicated Spatial Ordinal Data
2018-12-06	CMplot	Circle Manhattan Plot
2018-12-06	ConvergenceClubs	Finding Convergence Clubs
2018-12-06	EcoIndR	Ecological Indicators
2018-12-06	emstreeR	Fast Computing Euclidean Minimum Spanning Trees
2018-12-06	FactorsR	Identification of the Factors Affecting Species Richness
2018-12-06	fastqcr	Quality Control of Sequencing Data
2018-12-06	FunChisq	Chi-Square and Exact Tests for Model-Free Functional Dependency
2018-12-06	GenEst	Generalized Mortality Estimator
2018-12-06	hsdar	Manage, Analyse and Simulate Hyperspectral Data
2018-12-06	idealstan	Generalized IRT Ideal Point Models with 'Stan'
2018-12-06	mdendro	Variable-Group Methods for Agglomerative Hierarchical Clustering
2018-12-06	metatest	Fit and Test Metaregression Models
2018-12-06	multinet	Analysis and Mining of Multilayer Social Networks
2018-12-06	nngeo	k-Nearest Neighbor Join for Spatial Data
2018-12-06	overlapping	Estimation of Overlapping in Empirical Distributions
2018-12-06	pleio	Pleiotropy Test for Multiple Traits on a Genetic Marker
2018-12-06	rvcheck	R/Package Version Check
2018-12-06	SAMM	Some Algorithms for Mixed Models
2018-12-06	seqminer	Efficiently Read Sequence Data (VCF Format, BCF Format, METAL Format and BGEN Format) into R
2018-12-06	spacesXYZ	CIE XYZ and some of Its Derived Color Spaces
2018-12-06	SPEDInstabR	Estimation of the Relative Importance of Factors Affecting Species Distribution Based on Stability Concept
2018-12-06	surveydata	Tools to Work with Survey Data
2018-12-06	trajectories	Classes and Methods for Trajectory Data
2018-12-06	vlad	Variable Life Adjusted Display and Other Risk-Adjusted Quality Control Charts
2018-12-05	acopula	Modelling Dependence with Multivariate Archimax (or any User-Defined Continuous) Copulas
2018-12-05	AHR	Estimation and Testing of Average Hazard Ratios
2018-12-05	arulesViz	Visualizing Association Rules and Frequent Itemsets
2018-12-05	broom	Convert Statistical Analysis Objects into Tidy Tibbles
2018-12-05	brranching	Fetch 'Phylogenies' from Many Sources
2018-12-05	csvread	Fast Specialized CSV File Loader
2018-12-05	ddsPLS	Multi-Data-Driven Sparse PLS Robust to Missing Samples
2018-12-05	dst	Using the Theory of Belief Functions
2018-12-05	echo.find	Finding Rhythms Using Extended Circadian Harmonic Oscillators (ECHO)
2018-12-05	EMD	Empirical Mode Decomposition and Hilbert Spectral Analysis
2018-12-05	eplusr	A Toolkit for Using Whole Building Simulation Program 'EnergyPlus'
2018-12-05	errors	Uncertainty Propagation for R Vectors
2018-12-05	fsdaR	Robust Data Analysis Through Monitoring and Dynamic Visualization
2018-12-05	fun	Use R for Fun
2018-12-05	fuzzyreg	Fuzzy Linear Regression
2018-12-05	glmmboot	Bootstrap Resampling for Mixed Effects and Plain Models
2018-12-05	humanleague	Synthetic Population Generator
2018-12-05	IRISMustangMetrics	Statistics and Metrics for Seismic Data
2018-12-05	KnowBR	Discriminating Well Surveyed Spatial Units from Exhaustive Biodiversity Databases
2018-12-05	LLSR	Data Analysis of Liquid-Liquid Systems
2018-12-05	pkgsearch	Search CRAN R Packages
2018-12-05	processx	Execute and Control System Processes
2018-12-05	profr	An Alternative Display for Profiling Information
2018-12-05	quantities	Quantity Calculus for R Vectors
2018-12-05	rpql	Regularized PQL for Joint Selection in GLMMs
2018-12-05	rsconnect	Deployment Interface for R Markdown Documents and Shiny Applications
2018-12-05	ruler	Tidy Data Validation Reports
2018-12-05	spCP	Spatially Varying Change Points
2018-12-05	testit	A Simple Package for Testing R Packages
2018-12-05	tsibble	Tidy Temporal Data Frames and Tools
2018-12-05	units	Measurement Units for R Vectors
2018-12-05	visNetwork	Network Visualization using 'vis.js' Library
2018-12-04	biospear	Biomarker Selection in Penalized Regression Models
2018-12-04	codebook	Automatic Codebooks from Survey Metadata Encoded in Attributes
2018-12-04	HiCfeat	Multiple Logistic Regression for 3D Chromatin Domain Border Analysis
2018-12-04	JointAI	Joint Analysis and Imputation of Incomplete Data
2018-12-04	matchingMarkets	Analysis of Stable Matchings
2018-12-04	pdfCluster	Cluster Analysis via Nonparametric Density Estimation
2018-12-04	prediction	Tidy, Type-Safe 'prediction()' Methods
2018-12-04	rerf	Randomer Forest
2018-12-04	rTensor	Tools for Tensor Analysis and Decomposition
2018-12-04	seismicRoll	Fast Rolling Functions for Seismology using 'Rcpp'
2018-12-04	shadow	Geometric Shadow Calculations
2018-12-04	womblR	Spatiotemporal Boundary Detection Model for Areal Unit Data
2018-12-03	aGE	Adaptive Set-Based Gene-Environment Interaction Test for Rare Variants
2018-12-03	argonDash	Argon Shiny Dashboard Template
2018-12-03	arules	Mining Association Rules and Frequent Itemsets
2018-12-03	Ball	Statistical Inference and Sure Independence Screening via Ball Statistics
2018-12-03	BeyondBenford	Compare the Goodness of Fit of Benford's and Blondeau Da Silva's Digit Distributions to a Given Dataset
2018-12-03	bookdown	Authoring Books and Technical Documents with R Markdown
2018-12-03	cglm	Fits Conditional Generalized Linear Models
2018-12-03	clr	Curve Linear Regression via Dimension Reduction
2018-12-03	copBasic	General Bivariate Copula Theory and Many Utility Functions
2018-12-03	CopCTS	Copula-Based Semiparametric Analysis for Time Series Data with Detection Limits
2018-12-03	Copula.surv	Association Analysis of Bivariate Survival Data Based on Copulas
2018-12-03	CpDyna	Change Point Detection in Dynamic Graphs
2018-12-03	customsteps	Customizable Higher-Order Recipe Step Functions
2018-12-03	cvmgof	Cramer-von Mises Goodness-of-Fit Tests
2018-12-03	DIMORA	Diffusion Models R Analysis
2018-12-03	dr4pl	Dose Response Data Analysis using the 4 Parameter Logistic (4pl) Model
2018-12-03	episensr	Basic Sensitivity Analysis of Epidemiological Results
2018-12-03	ev.trawl	Extreme Value Trawls
2018-12-03	eyetrackingR	Eye-Tracking Data Analysis
2018-12-03	FAMoS	A Flexible Algorithm for Model Selection (FAMoS)
2018-12-03	fbar	An Extensible Approach to Flux Balance Analysis
2018-12-03	featurefinder	Feature Finder
2018-12-03	GENMETA	Implements Generalized Meta-Analysis Using Iterated Reweighted Least Squares Algorithm
2018-12-03	gmat	Simulation of Graphically Constrained Matrices
2018-12-03	ical	'iCalendar' Parsing
2018-12-03	icsurvROC	Interval Censored Survival ROC
2018-12-03	jackstraw	Statistical Inference for Unsupervised Learning
2018-12-03	lspartition	Nonparametric Estimation and Inference Procedures using Partitioning-Based Least Squares Regression
2018-12-03	MazamaCoreUtils	Utility Functions for Production R Code
2018-12-03	meanShiftR	A Computationally Efficient Mean Shift Implementation
2018-12-03	misaem	Stochastic Approximation EM for Logistic Regression with Missing Values
2018-12-03	mixRaschTools	Plotting and Average Theta Functions for Multiple Class Mixed Rasch Models
2018-12-03	mlergm	Multilevel Exponential-Family Random Graph Models
2018-12-03	mlt	Most Likely Transformations
2018-12-03	MODIStsp	A Tool for Automating Download and Preprocessing of MODIS Land Products Data
2018-12-03	moveVis	Movement Data Visualization
2018-12-03	npExact	Exact Nonparametric Hypothesis Tests for the Mean, Variance and Stochastic Inequality
2018-12-03	ParBayesianOptimization	Parallel Bayesian Optimization of Hyperparameters
2018-12-03	PeakSegDisk	Disk-Based Implementation of PeakSegFPOP
2018-12-03	PKconverter	The Parameter Converter of the Pharmacokinetic Models
2018-12-03	pkgcond	Classed Error and Warning Conditions
2018-12-03	ppcc	Probability Plot Correlation Coefficient Test
2018-12-03	qccrs	Quality Control Charts under Repetitive Sampling
2018-12-03	refuge	Locate Trans and Intersex-Friendly Toilets
2018-12-03	remedy	'RStudio' Addins to Simplify 'Markdown' Writing
2018-12-03	rnoaa	'NOAA' Weather Data from R
2018-12-03	RProbSup	Calculates Probability of Superiority
2018-12-03	semds	Structural Equation Multidimensional Scaling
2018-12-03	SMFilter	Filtering Algorithms for the State Space Models on the Stiefel Manifold
2018-12-03	SoilHyP	Soil Hydraulic Properties
2018-12-03	solartime	Utilities Dealing with Solar Time Such as Sun Position and Time of Sunrise
2018-12-03	spData	Datasets for Spatial Analysis
2018-12-03	tabula	Analysis, Seriation and Visualization of Archaeological Count Data
2018-12-03	twosamples	Fast Permutation Based Two Sample Tests
2018-12-03	vmsbase	GUI Tools to Process, Analyze and Plot Fisheries Data
2018-12-02	ar.matrix	Simulate Auto Regressive Data from Precision Matricies
2018-12-02	AzureRMR	Interface to 'Azure Resource Manager'
2018-12-02	BayesianNetwork	Bayesian Network Modeling and Analysis
2018-12-02	compas	Conformational Manipulations of Protein Atomic Structures
2018-12-02	covatest	Tests on Properties of Space-Time Covariance Functions
2018-12-02	DBKGrad	Discrete Beta Kernel Graduation of Mortality Data
2018-12-02	eAnalytics	Dynamic Web-Based Analytics for the Energy Industry
2018-12-02	empirical	Probability Distributions as Models of Data
2018-12-02	energyr	Data Published by the United States Federal Energy Regulatory Commission
2018-12-02	ezpickr	Import Various Data File Types as a Rectangular Form Using a File Picker Dialogue Box
2018-12-02	hoardr	Manage Cached Files
2018-12-02	pmd	Paired Mass Distance Analysis for GC/LC-MS Based Non-Targeted Analysis
2018-12-02	pracma	Practical Numerical Math Functions
2018-12-02	rsoi	Import Various Northern and Southern Hemisphere Climate Indices
2018-12-02	smooth	Forecasting Using State Space Models
2018-12-02	TPMplt	Tool-Kit for Dynamic Materials Model and Thermal Processing Maps
2018-12-02	TreeDep	Air Pollution Removal by Dry Deposition on Trees
2018-12-02	writexl	Export Data Frames to Excel 'xlsx' Format
2018-12-01	cartogram	Create Cartograms with R
2018-12-01	causalweight	Estimation Methods for Causal Inference Based on Inverse Probability Weighting
2018-12-01	cleandata	To Inspect and Manipulate Data; and to Keep Track of This Process
2018-12-01	commonmark	High Performance CommonMark and Github Markdown Rendering in R
2018-12-01	container	Deque, Set, and Dict - R6 Based Container Classes with Iterators
2018-12-01	ggQC	Quality Control Charts for 'ggplot'
2018-12-01	graphql	A GraphQL Query Parser
2018-12-01	groupedstats	Grouped Statistical Analyses in a Tidy Way
2018-12-01	HMMcopula	Markov Regime Switching Copula Models Estimation and Goodness of Fit
2018-12-01	keyholder	Store Data About Rows
2018-12-01	lbfgsb3c	Limited Memory BFGS Minimizer with Bounds on Parameters with optim() 'C' Interface
2018-12-01	scrime	Analysis of High-Dimensional Categorical Data Such as SNP Data
2018-12-01	SeedCalc	Seed Germination and Seedling Growth Indexes
2018-12-01	snfa	Smooth Non-Parametric Frontier Analysis
2018-12-01	telegram.bot	Develop a 'Telegram Bot' with R
2018-12-01	TR8	A Tool for Downloading Functional Traits Data for Plant Species
2018-11-30	AMR	Antimicrobial Resistance Analysis
2018-11-30	argparse	Command Line Optional and Positional Argument Parser
2018-11-30	ARTP2	Pathway and Gene-Level Association Test
2018-11-30	bamp	Bayesian Age-Period-Cohort Modeling and Prediction
2018-11-30	BART	Bayesian Additive Regression Trees
2018-11-30	BayesMallows	Bayesian Preference Learning with the Mallows Rank Model
2018-11-30	effects	Effect Displays for Linear, Generalized Linear, and Other Models
2018-11-30	fishtree	Interface to the Fish Tree of Life API
2018-11-30	ggnormalviolin	A 'ggplot2' Extension to Make Normal Violin Plots
2018-11-30	greybox	Toolbox for Model Building and Forecasting
2018-11-30	HMB	Hierarchical Model-Based Estimation Approach
2018-11-30	ImputeRobust	Robust Multiple Imputation with Generalized Additive Models for Location Scale and Shape
2018-11-30	incidence	Compute, Handle, Plot and Model Incidence of Dated Events
2018-11-30	interactionTest	Calculates Critical Test Statistics to Control False Discovery Rates in Marginal Effects Plots
2018-11-30	JGL	Performs the Joint Graphical Lasso for Sparse Inverse Covariance Estimation on Multiple Classes
2018-11-30	jmvconnect	Connect to the 'jamovi' Statistical Spreadsheet
2018-11-30	lg	Locally Gaussian Distributions: Estimation and Methods
2018-11-30	logging	R Logging Package
2018-11-30	merDeriv	Case-Wise and Cluster-Wise Derivatives for Mixed Effects Models
2018-11-30	MetaboLouise	METABOlomics LOngitudinal SimUlation Engine
2018-11-30	nCopula	Hierarchical Archimedean Copulas Constructed with Multivariate Compound Distributions
2018-11-30	PCMBase	Simulation and Likelihood Calculation of Phylogenetic Comparative Models
2018-11-30	RATest	Randomization Tests
2018-11-30	RcppEnsmallen	Header-Only C++ Mathematical Optimization Library for 'Armadillo'
2018-11-30	rCRM	Regularized Continual Reassessment Method
2018-11-30	rdbnomics	Download DBnomics Data
2018-11-30	rdtLite	Provenance Collector
2018-11-30	relsurv	Relative Survival
2018-11-30	Rpolyhedra	Polyhedra Database
2018-11-30	rSEA	Simultaneous Enrichment Analysis
2018-11-30	SeqFeatR	A Tool to Associate FASTA Sequences and Features
2018-11-30	smartR	Spatial Management and Assessment of Demersal Resources for Trawl Fisheries
2018-11-30	strex	Extra String Manipulation Functions
2018-11-30	vistributions	Visualize Probability Distributions
2018-11-29	albopictus	Age-Structured Population Dynamics Model
2018-11-29	baRcodeR	Labelling, Tracking, and Collecting Data from Biological Samples
2018-11-29	basicMCMCplots	Trace Plots, Density Plots and Chain Comparisons for MCMC Samples
2018-11-29	causaleffect	Deriving Expressions of Joint Interventional Distributions and Transport Formulas in Causal Models
2018-11-29	celestial	Collection of Common Astronomical Conversion Routines and Functions
2018-11-29	changepoint.mv	Changepoint Analysis for Multivariate Time Series
2018-11-29	circumplex	Analysis and Visualization of Circular Data
2018-11-29	ectotemp	Quantitative Estimates of Small Ectotherm Temperature Regulation Effectiveness
2018-11-29	epoc	Endogenous Perturbation Analysis of Cancer
2018-11-29	findpython	Functions to Find an Acceptable Python Binary
2018-11-29	fitplc	Fit Hydraulic Vulnerability Curves
2018-11-29	generics	Common S3 Generics not Provided by Base R Methods Related to Model Fitting
2018-11-29	intccr	Semiparametric Competing Risks Regression under Interval Censoring
2018-11-29	iotables	Importing and Manipulating Symmetric Input-Output Tables
2018-11-29	IRdisplay	'Jupyter' Display Machinery
2018-11-29	kst	Knowledge Space Theory
2018-11-29	leaflet.opacity	Opacity Controls for Leaflet Maps
2018-11-29	magicaxis	Pretty Scientific Plotting with Minor-Tick and Log Minor-Tick Support
2018-11-29	meta	General Package for Meta-Analysis
2018-11-29	phylocomr	Interface to 'Phylocom'
2018-11-29	preference	2-Stage Preference Trial Design and Analysis
2018-11-29	psica	Decision Tree Analysis for Probabilistic Subgroup Identification with Multiple Treatments
2018-11-29	REAT	Regional Economic Analysis Toolbox
2018-11-29	revtools	Tools to Support Evidence Synthesis
2018-11-29	RiemBase	Functions and C++ Header Files for Computation on Manifolds
2018-11-29	Rsomoclu	Somoclu
2018-11-29	RStorm	Simulate and Develop Streaming Processing
2018-11-29	rWind	Download, Edit and Include Wind Data in Ecological and Evolutionary Analysis
2018-11-29	selectapref	Analysis of Field and Laboratory Foraging
2018-11-29	SkewHyperbolic	The Skew Hyperbolic Student t-Distribution
2018-11-29	sparklyr	R Interface to Apache Spark
2018-11-29	textfeatures	Extracts Features from Text
2018-11-29	tidytree	A Tidy Tool for Phylogenetic Tree Data Manipulation
2018-11-29	tmod	Feature Set Enrichment Analysis for Metabolomics and Transcriptomics
2018-11-29	vctrs	Vector Helpers
2018-11-29	WebPower	Basic and Advanced Statistical Power Analysis
2018-11-29	wiseR	A Shiny Application for End-to-End Bayesian Decision Network Analysis and Web-Deployment
2018-11-28	chandwich	Chandler-Bate Sandwich Loglikelihood Adjustment
2018-11-28	ChemoSpec	Exploratory Chemometrics for Spectroscopy
2018-11-28	ChemoSpecUtils	Functions Supporting Packages ChemoSpec and ChemoSpec2D
2018-11-28	clusterSim	Searching for Optimal Clustering Procedure for a Data Set
2018-11-28	ed50	Estimate ED50 and Its Confidence Interval
2018-11-28	elevatr	Access Elevation Data from Various APIs
2018-11-28	ETAS	Modeling Earthquake Data Using 'ETAS' Model
2018-11-28	fabMix	Overfitting Bayesian Mixtures of Factor Analyzers with Parsimonious Covariance and Unknown Number of Components
2018-11-28	GCD	Global Charcoal Database
2018-11-28	hgutils	Collection of Utility Functions
2018-11-28	imagerExtra	Extra Image Processing Library Based on 'imager'
2018-11-28	LSAfun	Applied Latent Semantic Analysis (LSA) Functions
2018-11-28	netSEM	Network Structural Equation Modeling
2018-11-28	physiology	Calculate physiologic characteristics of awake and anesthetized adults, children and infants
2018-11-28	ProFit	Fit Projected 2D Profiles to Galaxy Images
2018-11-28	ProFound	Photometry Tools
2018-11-28	rchie	A Parser for 'ArchieML'
2018-11-28	RcppArmadillo	'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra Library
2018-11-28	riskPredictClustData	Assessing Risk Predictions for Clustered Data
2018-11-28	Sim.DiffProc	Simulation of Diffusion Processes
2018-11-28	sugrrants	Supporting Graphs for Analysing Time Series
2018-11-28	tfse	Tools for Script Editing
2018-11-27	AnaCoDa	Analysis of Codon Data under Stationarity using a Bayesian Framework
2018-11-27	CARRoT	Predicting Categorical and Continuous Outcomes Using One in Ten Rule
2018-11-27	CUB	A Class of Mixture Models for Ordinal Data
2018-11-27	DistributionUtils	Distribution Utilities
2018-11-27	easyanova	Analysis of Variance and Other Important Complementary Analyses
2018-11-27	FRESA.CAD	Feature Selection Algorithms for Computer Aided Diagnosis
2018-11-27	gllm	Generalised log-Linear Model
2018-11-27	HCmodelSets	Regression with a Large Number of Potential Explanatory Variables
2018-11-27	landsepi	Landscape Epidemiology and Evolution
2018-11-27	lasso2	L1 Constrained Estimation aka ‘lasso’
2018-11-27	nowcasting	Predicting Economic Variables using Dynamic Factor Models
2018-11-27	plot.matrix	Visualizes a Matrix as Heatmap
2018-11-27	processanimateR	Process Map Token Replay Animation
2018-11-27	pseudorank	Pseudo-Ranks
2018-11-27	RDFTensor	Different Tensor Factorization (Decomposition) Techniques for RDF Tensors (Three-Mode-Tensors)
2018-11-27	repr	Serializable Representations
2018-11-27	sfsmisc	Utilities from 'Seminar fuer Statistik' ETH Zurich
2018-11-27	SpatialGraph	SpatialGraph Class
2018-11-27	StatDA	Statistical Analysis for Environmental Data
2018-11-27	TAShiny	'Text Analyzer Shiny'
2018-11-27	TeachNet	Fits Neural Networks to Learn About Backpropagation
2018-11-27	tidymodels	Easily Install and Load the 'Tidymodels' Packages
2018-11-27	trafo	Estimation, Comparison and Selection of Transformations
2018-11-26	adamethods	Archetypoid Algorithms and Anomaly Detection
2018-11-26	AdhereR	Adherence to Medications
2018-11-26	bioacoustics	Analyse Audio Recordings and Automatically Extract Animal Vocalizations
2018-11-26	bipartiteD3	Interactive Bipartite Graphs
2018-11-26	capm	Companion Animal Population Management
2018-11-26	coveffectsplot	Produce Forest Plots to Visualize Covariate Effects
2018-11-26	cranlike	Tools for 'CRAN'-Like Repositories
2018-11-26	crosswalkr	Rename and Encode Data Frames Using External Crosswalk Files
2018-11-26	dartR	Importing and Analysing SNP and Silicodart Data Generated by Genome-Wide Restriction Fragment Analysis
2018-11-26	fChange	Change Point Analysis in Functional Data
2018-11-26	FlexParamCurve	Tools to Fit Flexible Parametric Curves
2018-11-26	FSMUMI	Imputation of Time Series Based on Fuzzy Logic
2018-11-26	GENEAsphere	Visualisation of Raw or Segmented Accelerometer Data
2018-11-26	GSED	Group Sequential Enrichment Design
2018-11-26	hmm.discnp	Hidden Markov Models with Discrete Non-Parametric Observation Distributions
2018-11-26	hR	An HR Analytics Toolkit
2018-11-26	hsphase	Phasing, Pedigree Reconstruction, Sire Imputation and Recombination Events Identification of Half-sib Families Using SNP Data
2018-11-26	ipdw	Spatial Interpolation by Inverse Path Distance Weighting
2018-11-26	kappaSize	Sample Size Estimation Functions for Studies of Interobserver Agreement
2018-11-26	mixKernel	Omics Data Integration Using Kernel Methods
2018-11-26	MRFcov	Markov Random Fields with Additional Covariates
2018-11-26	NormalLaplace	The Normal Laplace Distribution
2018-11-26	npordtests	Nonparametric Tests for Equality of Location Against Ordered Alternatives
2018-11-26	PDShiny	'Probability Distribution Shiny'
2018-11-26	postlogic	Infix and Postfix Logic Operators
2018-11-26	questionr	Functions to Make Surveys Processing Easier
2018-11-26	raptr	Representative and Adequate Prioritization Toolkit in R
2018-11-26	rdwd	Select and Download Climate Data from 'DWD' (German Weather Service)
2018-11-26	read.gb	Open GenBank Files
2018-11-26	readODS	Read and Write ODS Files
2018-11-26	restez	Create and Query a Local Copy of 'GenBank' in R
2018-11-26	rio	A Swiss-Army Knife for Data I/O
2018-11-26	SetMethods	Functions for Set-Theoretic Multi-Method Research and Advanced QCA
2018-11-26	suropt	Surrogate-Based Optimization
2018-11-26	survival	Survival Analysis
2018-11-26	TRES	Tensor Regression with Envelope Structure and Three Generic Envelope Estimation Approaches
2018-11-26	VarianceGamma	The Variance Gamma Distribution
2018-11-26	YPInterimTesting	Interim Monitoring Using Adaptively Weighted Log-Rank Test in Clinical Trials
2018-11-26	ypr	Yield Per Recruit
2018-11-26	Z10	Simple Ecological Statistics from the NEON Network
2018-11-26	zscorer	Child Anthropometry z-Score Calculator
2018-11-25	BatchGetSymbols	Downloads and Organizes Financial Data for Multiple Tickers
2018-11-25	cobalt	Covariate Balance Tables and Plots
2018-11-25	DatabaseConnector	Connecting to Various Database Platforms
2018-11-25	document	Run 'roxygen2' on (Chunks of) Single Code Files
2018-11-25	GGIR	Raw Accelerometer Data Analysis
2018-11-25	insect	Informatic Sequence Classification Trees
2018-11-25	jstor	Read Data from JSTOR/DfR
2018-11-25	labelled	Manipulating Labelled Data
2018-11-25	lava	Latent Variable Models
2018-11-25	MplusAutomation	An R Package for Facilitating Large-Scale Latent Variable Analyses in Mplus
2018-11-25	rdflib	Tools to Manipulate and Query Semantic Data
2018-11-25	RonFHIR	Read and Search Interface to the 'HL7 FHIR' REST API
2018-11-25	SPREDA	Statistical Package for Reliability Data Analysis
2018-11-25	ssdtools	Species Sensitivity Distributions
2018-11-25	stackoverflow	Stack Overflow's Greatest Hits
2018-11-25	toxboot	Bootstrap Methods for 'ToxCast' High Throughput Screening Data
2018-11-25	TSstudio	Functions for Time Series Analysis and Forecasting
2018-11-25	wfe	Weighted Linear Fixed Effects Regression Models for Causal Inference
2018-11-25	yuimaGUI	A Graphical User Interface for the 'yuima' Package
2018-11-24	EmpiricalCalibration	Routines for Performing Empirical Calibration of Observational Study Estimates
2018-11-24	eurostat	Tools for Eurostat Open Data
2018-11-24	grf	Generalized Random Forests (Beta)
2018-11-24	isoph	Isotonic Proportional Hazards Model
2018-11-24	mcmcr	Manipulate MCMC Samples
2018-11-24	Numero	Statistical Framework to Define Subgroups in Complex Datasets
2018-11-24	photobiologyInOut	Read Spectral and Logged Data from Foreign Files
2018-11-24	plotmo	Plot a Model's Residuals, Response, and Partial Dependence Plots
2018-11-24	ppitables	Lookup Tables to Generate Poverty Likelihoods and Rates using the Poverty Probability Index (PPI)
2018-11-24	RcppEigen	'Rcpp' Integration for the 'Eigen' Templated Linear Algebra Library
2018-11-24	Rmagic	MAGIC - Markov Affinity-Based Graph Imputation of Cells
2018-11-24	rpart.plot	Plot 'rpart' Models: An Enhanced Version of 'plot.rpart'
2018-11-24	stminsights	A 'Shiny' Application for Inspecting Structural Topic Models
2018-11-24	STPGA	Selection of Training Populations by Genetic Algorithm
2018-11-23	CytobankAPI	Cytobank API Wrapper for R
2018-11-23	dirichletprocess	Build Dirichlet Process Objects for Bayesian Modelling
2018-11-23	esDesign	Adaptive Enrichment Designs with Sample Size Re-Estimation
2018-11-23	googlePolylines	Encoding Coordinates into 'Google' Polylines
2018-11-23	impimp	Imprecise Imputation for Statistical Matching
2018-11-23	lognorm	Functions for the Lognormal Distribution
2018-11-23	MachineShop	Machine Learning Models and Tools
2018-11-23	MESS	Miscellaneous Esoteric Statistical Scripts
2018-11-23	metamedian	Meta-Analysis of Medians
2018-11-23	multiApply	Apply Functions to Multiple Multidimensional Arrays or Vectors
2018-11-23	MXM	Feature Selection (Including Multiple Solutions) and Bayesian Networks
2018-11-23	patternize	Quantification of Color Pattern Variation
2018-11-23	pid	Process Improvement using Data
2018-11-23	RcppThread	R-Friendly Threading in C++
2018-11-23	SqlRender	Rendering Parameterized SQL and Translation to Dialects
2018-11-23	tadaatoolbox	Helpers for Data Analysis and Presentation Focused on Undergrad Psychology
2018-11-22	abn	Modelling Multivariate Data with Additive Bayesian Networks
2018-11-22	asnipe	Animal Social Network Inference and Permutations for Ecologists
2018-11-22	beyondWhittle	Bayesian Spectral Inference for Stationary Time Series
2018-11-22	bssm	Bayesian Inference of Non-Linear and Non-Gaussian State Space Models
2018-11-22	Delaporte	Statistical Functions for the Delaporte Distribution
2018-11-22	FLSSS	Mining Rigs for Specialized Subset Sum, Multi-Subset Sum, Multidimensional Subset Sum, Multidimensional Knapsack, Generalized Assignment Problems
2018-11-22	FSA	Simple Fisheries Stock Assessment Methods
2018-11-22	geojsonsf	GeoJSON to Simple Feature Converter
2018-11-22	goeveg	Functions for Community Data and Ordinations
2018-11-22	gravity	Estimation Methods for Gravity Models
2018-11-22	haven	Import and Export 'SPSS', 'Stata' and 'SAS' Files
2018-11-22	hydrostats	Hydrologic Indices for Daily Time Series Data
2018-11-22	IBCF.MTME	Item Based Collaborative Filtering for Multi-Trait and Multi-Environment Data
2018-11-22	iClick	A Button-Based GUI for Financial and Economic Data Analysis
2018-11-22	keras	R Interface to 'Keras'
2018-11-22	metaboGSE	Gene Set Enrichment Analysis via Integration of Metabolic Networks and RNA-Seq Data
2018-11-22	momentuHMM	Maximum Likelihood Analysis of Animal Movement Behavior Using Multivariate Hidden Markov Models
2018-11-22	ngstk	Next-Generation Sequencing (NGS) Data Analysis Toolkit
2018-11-22	olsrr	Tools for Building OLS Regression Models
2018-11-22	protr	Generating Various Numerical Representation Schemes for Protein Sequences
2018-11-22	SemiMarkov	Multi-States Semi-Markov Models
2018-11-22	SIfEK	Statistical Inference for Enzyme Kinetics
2018-11-22	sirt	Supplementary Item Response Theory Models
2018-11-22	sjlabelled	Labelled Data Utility Functions
2018-11-22	tidystringdist	String Distance Calculation with Tidy Data Principles
2018-11-22	TSrepr	Time Series Representations
2018-11-22	vagalumeR	Access to the 'Vagalume' API
2018-11-22	WeightIt	Weighting for Covariate Balance in Observational Studies
2018-11-21	acebayes	Optimal Bayesian Experimental Design using the ACE Algorithm
2018-11-21	alterryx	An 'API' Client for the 'Alteryx' Gallery
2018-11-21	assertive.data	Assertions to Check Properties of Data
2018-11-21	BIGL	Biochemically Intuitive Generalized Loewe Model
2018-11-21	circlize	Circular Visualization
2018-11-21	cladoRcpp	C++ Implementations of Phylogenetic Cladogenesis Calculations
2018-11-21	dendroTools	Linear and Nonlinear Methods for Analyzing Dendroclimatological Data
2018-11-21	double.truncation	Analysis of Doubly-Truncated Data
2018-11-21	EpiModel	Mathematical Modeling of Infectious Disease Dynamics
2018-11-21	glassdoor	Interface to 'Glassdoor' API
2018-11-21	lime	Local Interpretable Model-Agnostic Explanations
2018-11-21	metacart	Meta-CART: A Flexible Approach to Identify Moderators in Meta-Analysis
2018-11-21	mgcv	Mixed GAM Computation Vehicle with Automatic Smoothness Estimation
2018-11-21	micemd	Multiple Imputation by Chained Equations with Multilevel Data
2018-11-21	ordinalCont	Ordinal Regression Analysis for Continuous Scales
2018-11-21	PMmisc	P&M Miscellaneous R Functions
2018-11-21	rmytarget	Load Data from 'MyTarget API'
2018-11-21	spdep	Spatial Dependence: Weighting Schemes, Statistics and Models
2018-11-20	assertive.matrices	Assertions to Check Properties of Matrices
2018-11-20	BioInstaller	Integrator of Bioinformatics Resources
2018-11-20	cancensus	Canadian Census Data and Geography from the 'CensusMapper' API
2018-11-20	caret	Classification and Regression Training
2018-11-20	CARS	Covariate Assisted Ranking and Screening for Large-Scale Two-Sample Inference
2018-11-20	ctsem	Continuous Time Structural Equation Modelling
2018-11-20	dobson	Data from the GLM Book by Dobson and Barnett
2018-11-20	farver	Vectorised Colour Conversion and Comparison
2018-11-20	fishmethods	Fishery Science Methods and Models
2018-11-20	GADMTools	Easy Use of 'GADM' Shapefiles
2018-11-20	gcite	Google Citation Parser
2018-11-20	lavaSearch2	Tools for Model Specification in the Latent Variable Framework
2018-11-20	meteoForecast	Numerical Weather Predictions
2018-11-20	mets	Analysis of Multivariate Event Times
2018-11-20	mma	Multiple Mediation Analysis
2018-11-20	modi	Multivariate Outlier Detection and Imputation for Incomplete Survey Data
2018-11-20	naniar	Data Structures, Summaries, and Visualisations for Missing Data
2018-11-20	neurobase	'Neuroconductor' Base Package with Helper Functions for 'nifti' Objects
2018-11-20	OjaNP	Multivariate Methods Based on the Oja Median and Related Concepts
2018-11-20	openair	Tools for the Analysis of Air Pollution Data
2018-11-20	opencpu	Producing and Reproducing Results
2018-11-20	optional	Optional Types and Pattern Matching
2018-11-20	pathfindR	Pathway Enrichment Analysis Utilizing Active Subnetworks
2018-11-20	qkerntool	Q-Kernel-Based and Conditionally Negative Definite Kernel-Based Machine Learning Tools
2018-11-20	rhandsontable	Interface to the 'Handsontable.js' Library
2018-11-20	rnrfa	UK National River Flow Archive Data from R
2018-11-20	rsample	General Resampling Infrastructure
2018-11-20	RSE	Number of Newly Discovered Rare Species Estimation
2018-11-20	rsppfp	R's Shortest Path Problem with Forbidden Subpaths
2018-11-20	scico	Colour Palettes Based on the Scientific Colour-Maps
2018-11-20	SimInf	A Framework for Data-Driven Stochastic Disease Spread Simulations
2018-11-20	speaq	Tools for Nuclear Magnetic Resonance (NMR) Spectra Alignment, Peak Based Processing, Quantitative Analysis and Visualizations
2018-11-20	styler	Non-Invasive Pretty Printing of R Code
2018-11-20	tidygraph	A Tidy API for Graph Manipulation
2018-11-20	tidyLPA	Easily Carry Out Latent Profile Analysis (LPA) Using Open-Source or Commercial Software
2018-11-20	whiboclustering	White Box Clustering Algorithm Design
2018-11-20	wikisourcer	Download Public Domain Works from Wikisource
2018-11-19	BHSBVAR	Structural Bayesian Vector Autoregression Models
2018-11-19	CAST	'caret' Applications for Spatial-Temporal Models
2018-11-19	clustvarsel	Variable Selection for Gaussian Model-Based Clustering
2018-11-19	collateral	Quickly Evaluate Captured Side Effects
2018-11-19	colorSpec	Color Calculations with Emphasis on Spectral Data
2018-11-19	dabestr	Data Analysis using Bootstrap-Coupled Estimation
2018-11-19	datarobot	'DataRobot' Predictive Modeling API
2018-11-19	deckgl	An R Interface to 'deck.gl'
2018-11-19	dqshiny	Enhance Shiny Apps with Customizable Modules
2018-11-19	EdSurvey	Analysis of NCES Education Survey and Assessment Data
2018-11-19	embed	Extra Recipes for Encoding Categorical Predictors
2018-11-19	epibasix	Elementary Epidemiological Functions for Epidemiology and Biostatistics
2018-11-19	fdq	Forest Data Quality
2018-11-19	ffmetadata	Access to Fragile Families Metadata
2018-11-19	FlexScan	Flexible Scan Statistics
2018-11-19	fslr	Wrapper Functions for 'FSL' ('FMRIB' Software Library) from Functional MRI of the Brain ('FMRIB')
2018-11-19	gginference	Visualise the Results of Inferential Statistics using 'ggplot2'
2018-11-19	ggsolvencyii	A 'ggplot2'-Plot of Composition of Solvency II SCR: SF and IM
2018-11-19	GLSE	Graphical Least Square Estimation
2018-11-19	GSODR	Global Surface Summary of the Day ('GSOD') Weather Data Client
2018-11-19	hillR	Diversity Through Hill Numbers
2018-11-19	irteQ	Linking and Equating Methods in Unidimensional Item Response Theory
2018-11-19	ITGM	Individual Tree Growth Modeling
2018-11-19	LindleyPowerSeries	Lindley Power Series Distribution
2018-11-19	metacoder	Tools for Parsing, Manipulating, and Graphing Taxonomic Abundance Data
2018-11-19	metR	Tools for Easier Analysis of Meteorological Fields
2018-11-19	MPTmultiverse	Multiverse Analysis of Multinomial Processing Tree Models
2018-11-19	mscstts	R Client for the Microsoft Cognitive Services 'Text-to-Speech' REST API
2018-11-19	NBDesign	Design and Monitoring of Clinical Trials with Negative Binomial Endpoint
2018-11-19	ODS	Statistical Methods for Outcome-Dependent Sampling Designs
2018-11-19	ordering	Test, Check, Verify, Investigate the Monotonic Properties of Vectors
2018-11-19	pivmet	Pivotal Methods for Bayesian Relabelling and k-Means Clustering
2018-11-19	pollimetry	Estimate Pollinator Body Size and Co-Varying Ecological Traits
2018-11-19	polyRAD	Genotype Calling with Uncertainty from Sequencing Data in Polyploids and Diploids
2018-11-19	propr	Calculating Proportionality Between Vectors of Compositional Data
2018-11-19	quanteda	Quantitative Analysis of Textual Data
2018-11-19	QuantumOps	Performs Common Linear Algebra Operations Used in Quantum Computing
2018-11-19	R.temis	Integrated Text Mining Solution
2018-11-19	RBesT	R Bayesian Evidence Synthesis Tools
2018-11-19	rcosmo	Cosmic Microwave Background Data Analysis
2018-11-19	recipes	Preprocessing Tools to Create Design Matrices
2018-11-19	ref.ICAR	Objective Bayes Intrinsic Conditional Autoregressive Model for Areal Data
2018-11-19	rphylopic	Get 'Silhouettes' of 'Organisms' from 'Phylopic'
2018-11-19	rscopus	Scopus Database 'API' Interface
2018-11-19	RZooRoH	Partitioning of Individual Autozygosity into Multiple Homozygous-by-Descent Classes
2018-11-19	scrm	Simulating the Evolution of Biological Sequences
2018-11-19	secr	Spatially Explicit Capture-Recapture
2018-11-19	shades	Simple Colour Manipulation
2018-11-19	similr	Text Similarity
2018-11-19	soilDB	Soil Database Interface
2018-11-19	spaMM	Mixed-Effect Models, Particularly Spatial Models
2018-11-19	spartan	Simulation Parameter Analysis R Toolkit ApplicatioN: 'spartan'
2018-11-19	spreadr	Simulating Spreading Activation in a Network
2018-11-19	stevedore	Docker Client
2018-11-19	StMoSim	Quantile-Quantile Plot with Several Gaussian Simulations
2018-11-19	tensorflow	R Interface to 'TensorFlow'
2018-11-19	tseries	Time Series Analysis and Computational Finance
2018-11-18	argonR	R Interface to Argon HTML Design
2018-11-18	bpbounds	Nonparametric Bounds for the Average Causal Effect Due to Balke and Pearl and Extensions
2018-11-18	cleanNLP	A Tidy Data Model for Natural Language Processing
2018-11-18	cusum	CUSUM Charts for Monitoring of Hospital Performance
2018-11-18	Fgmutils	Forest Growth Model Utilities
2018-11-18	fungible	Psychometric Functions from the Waller Lab
2018-11-18	icd	Comorbidity Calculations and Tools for ICD-9 and ICD-10 Codes
2018-11-18	IsoSpecR	The IsoSpec Algorithm
2018-11-18	lmviz	A Package to Visualize Linear Models Features and Play with Them
2018-11-18	lvnet	Latent Variable Network Modeling
2018-11-18	NPBayesImputeCat	Non-Parametric Bayesian Multiple Imputation for Categorical Data
2018-11-18	pdR	Threshold Model and Unit Root Tests in Cross-section and Time Series Data
2018-11-18	pems.utils	Portable Emissions (and Other Mobile) Measurement System Utilities
2018-11-18	pinbasic	Fast and Stable Estimation of the Probability of Informed Trading (PIN)
2018-11-18	RainfallErosivityFactor	The Rainfall-Runoff Erosivity Factor
2018-11-18	rcites	R Interface to the Species+ Database
2018-11-18	rcompanion	Functions to Support Extension Education Program Evaluation
2018-11-18	RcppMsgPack	'MsgPack' C++ Header Files and Interface Functions for R
2018-11-18	RFishBC	Back-Calculation of Fish Length
2018-11-18	rfviz	Interactive Visualization Tool for Random Forests
2018-11-18	scPDSI	Calculation of the Conventional and Self-Calibrating Palmer Drought Severity Index
2018-11-18	sctransform	Variance Stabilizing Transformations for Single Cell UMI Data
2018-11-18	shinyEffects	Customize Your Web Apps with Fancy Effects
2018-11-18	sigmajs	Interface to 'Sigma.js' Graph Visualization Library
2018-11-18	SII	Calculate ANSI S3.5-1997 Speech Intelligibility Index
2018-11-18	SpaDES.core	Core Utilities for Developing and Running Spatially Explicit Discrete Event Simulation Models
2018-11-18	tiler	Create Geographic and Non-Geographic Map Tiles
2018-11-18	TraMineR	Trajectory Miner: a Toolbox for Exploring and Rendering Sequences
2018-11-18	TSMCP	Fast Two Stage Multiple Change Point Detection
2018-11-18	valr	Genome Interval Arithmetic in R
2018-11-17	dslice	Dynamic Slicing
2018-11-17	ggeffects	Create Tidy Data Frames of Marginal Effects for 'ggplot' from Model Outputs
2018-11-17	mclust	Gaussian Mixture Modelling for Model-Based Clustering, Classification, and Density Estimation
2018-11-17	ncpen	Unified Algorithm for Non-convex Penalized Estimation for Generalized Linear Models
2018-11-17	rpdo	Pacific Decadal Oscillation Index Data
2018-11-17	svars	Data-Driven Identification of SVAR Models
2018-11-17	wTO	Computing Weighted Topological Overlaps (wTO) & Consensus wTO Network
2018-11-16	bibliometrix	An R-Tool for Comprehensive Science Mapping Analysis
2018-11-16	BivRec	Bivariate Alternating Recurrent Event Data Analysis
2018-11-16	easyCODA	Compositional Data Analysis in Practice
2018-11-16	ems	Epimed Solutions Collection for Data Editing, Analysis, and Benchmark of Health Units
2018-11-16	evtclass	Extreme Value Theory for Open Set Classification - GPD and GEV Classifiers
2018-11-16	FossilSim	Simulation of Fossil and Taxonomy Data
2018-11-16	GENEAclassify	Segmentation and Classification of Accelerometer Data
2018-11-16	GENEAread	Package for Reading Binary Files
2018-11-16	googleAuthR	Authenticate and Create Google APIs
2018-11-16	instruments	Estimate Regression Models with Instrumental Variables
2018-11-16	ipcwswitch	Inverse Probability of Censoring Weights to Deal with Treatment Switch in Randomized Clinical Trials
2018-11-16	IRkernel	Native R Kernel for the 'Jupyter Notebook'
2018-11-16	jetpack	A Friendly Package Manager
2018-11-16	lcc	Longitudinal Concordance Correlation
2018-11-16	lori	Low-Rank Interaction Contingency Tables
2018-11-16	MIXFIM	Evaluation of the FIM in NLMEMs using MCMC
2018-11-16	mltest	Classification Evaluation Metrics
2018-11-16	NLMR	Simulating Neutral Landscape Models
2018-11-16	nproc	Neyman-Pearson (NP) Classification Algorithms and NP Receiver Operating Characteristic (NP-ROC) Curves
2018-11-16	pammtools	Piece-Wise Exponential Additive Mixed Modeling Tools
2018-11-16	psymonitor	Real Time Monitoring of Asset Markets: Bubbles and Crisis
2018-11-16	pterrace	Persistence Terrace for Topological Data Analysis
2018-11-16	randcorr	Generate a Random p x p Correlation Matrix
2018-11-16	RcppGetconf	'Rcpp' Interface for Querying System Configuration Variables
2018-11-16	reproducible	A Set of Tools that Enhance Reproducibility Beyond Package Management
2018-11-16	survELtest	Comparing Multiple Survival Functions via Empirical Likelihood (EL) Based Tests
2018-11-16	tcpl	ToxCast Data Analysis Pipeline
2018-11-16	TGS	Rapid Reconstruction of Time-Varying Gene Regulatory Networks
2018-11-15	canvasXpress	Visualization Package for CanvasXpress in R
2018-11-15	cliqueMS	Annotation of Isotopes, Adducts and Fragmentation Adducts for in-Source LC/MS Metabolomics Data
2018-11-15	crseEventStudy	A Robust and Powerful Test of Abnormal Stock Returns in Long-Horizon Event Studies
2018-11-15	divest	Get Images Out of DICOM Format Quickly
2018-11-15	EpiSignalDetection	Signal Detection Analysis
2018-11-15	FRegSigCom	Functional Regression using Signal Compression Approach
2018-11-15	getTBinR	Get WHO Tuberculosis Data
2018-11-15	ggdistribute	A 'ggplot2' Extension for Plotting Unimodal Distributions
2018-11-15	ggpubr	'ggplot2' Based Publication Ready Plots
2018-11-15	ggvoronoi	Voronoi Diagrams and Heatmaps with 'ggplot2'
2018-11-15	HMMpa	Analysing Accelerometer Data Using Hidden Markov Models
2018-11-15	hommel	Methods for Closed Testing with Simes Inequality, in Particular Hommel's Method
2018-11-15	infer	Tidy Statistical Inference
2018-11-15	ITRLearn	Statistical Learning for Individualized Treatment Regime
2018-11-15	MetaStan	Bayesian Meta-Analysis via 'Stan'
2018-11-15	MultiJoin	Enables Efficient Joining of Data File on Common Fields using the Unix Utility Join
2018-11-15	openssl	Toolkit for Encryption, Signatures and Certificates Based on OpenSSL
2018-11-15	OsteoBioR	Temporal Estimation of Isotopic Values
2018-11-15	pkggraph	A Consistent and Intuitive Platform to Explore the Dependencies of Packages on the Comprehensive R Archive Network Like Repositories
2018-11-15	POUMM	The Phylogenetic Ornstein-Uhlenbeck Mixed Model
2018-11-15	powdR	Full Pattern Summation of X-Ray Powder Diffraction Data
2018-11-15	pvar	Calculation and Application of p-Variation
2018-11-15	Rdimtools	Dimension Reduction and Estimation Methods
2018-11-15	rrcov	Scalable Robust Estimators with High Breakdown Point
2018-11-15	rtika	R Interface to 'Apache Tika'
2018-11-15	sentometrics	An Integrated Framework for Textual Sentiment Time Series Aggregation and Prediction
2018-11-15	signalHsmm	Predict Presence of Signal Peptides
2018-11-15	sjstats	Collection of Convenient Functions for Common Statistical Computations
2018-11-15	spocc	Interface to Species Occurrence Data Sources
2018-11-15	sumFREGAT	Fast Region-Based Association Tests on Summary Statistics
2018-11-15	switchr	Installing, Managing, and Switching Between Distinct Sets of Installed Packages
2018-11-15	tidyposterior	Bayesian Analysis to Compare Models using Resampling Statistics
2018-11-15	UncDecomp	Uncertainty Decomposition
2018-11-14	anytime	Anything to 'POSIXct' or 'Date' Converter
2018-11-14	AutoStepwiseGLM	Builds Stepwise GLMs via Train and Test Approach
2018-11-14	BaMORC	Bayesian Model Optimized Reference Correction Method for Assigned and Unassigned Protein NMR Spectra
2018-11-14	BDgraph	Bayesian Structure Learning in Graphical Models using Birth-Death MCMC
2018-11-14	BondValuation	Fixed Coupon Bond Valuation Allowing for Odd Coupon Periods and Various Day Count Conventions
2018-11-14	bReeze	Functions for Wind Resource Assessment
2018-11-14	DescToolsAddIns	Some Functions to be Used as Shortcuts in 'RStudio'
2018-11-14	dlbayes	Use Dirichlet Laplace Prior to Solve Linear Regression Problem and Do Variable Selection
2018-11-14	echarts4r	Create Interactive Graphs with 'Echarts JavaScript' Version 4
2018-11-14	EpiReport	Epidemiological Report
2018-11-14	esquisse	Explore and Visualize Your Data Interactively
2018-11-14	flobr	Convert Files to and from Binary Objects (BLOBs)
2018-11-14	forestHES	Forest Health Evaluation System at the Forest Stand Level in China
2018-11-14	gamlss.countKinf	Generating and Fitting K-Inflated 'discrete gamlss.family' Distributions
2018-11-14	GB2group	Estimation of the Generalised Beta Distribution of the Second Kind from Grouped Data
2018-11-14	giphyr	R Interface to the Giphy API
2018-11-14	GJRM	Generalised Joint Regression Modelling
2018-11-14	gllvm	Generalized Linear Latent Variable Models
2018-11-14	GPM	Gaussian Process Modeling of Multi-Response Datasets
2018-11-14	histry	Enhanced Command History Tracking for R Sessions and Dynamic Documents
2018-11-14	JFE	A Menu-Driven GUI for Data Analysis of Just Finance and Econometrics
2018-11-14	LNIRT	LogNormal Response Time Item Response Theory Models
2018-11-14	LVGP	Latent Variable Gaussian Process Modeling with Qualitative and Quantitative Input Variables
2018-11-14	majesticR	R Interface to Access the 'Majestic' API
2018-11-14	MarketMatching	Market Matching and Causal Impact Inference
2018-11-14	metsyn	Interface with the Meteo France Synop Data API
2018-11-14	mixggm	Mixtures of Gaussian Graphical Models
2018-11-14	mixsqp	Sequential Quadratic Programming for Fast Maximum-Likelihood Estimation of Mixture Proportions
2018-11-14	mnreadR	MNREAD Parameters Estimation and Curve Plotting
2018-11-14	Modalclust	Hierarchical Modal Clustering
2018-11-14	packrat	A Dependency Management System for Projects and their R Package Dependencies
2018-11-14	personalized	Estimation and Validation Methods for Subgroup Identification and Personalized Medicine
2018-11-14	pkgverse	Build a Meta-Package Universe
2018-11-14	pluscode	Encoder for Google 'Pluscodes'
2018-11-14	portalr	Create Useful Summaries of the Portal Data
2018-11-14	RCSF	Airborne LiDAR Filtering Method Based on Cloth Simulation
2018-11-14	RGenData	Generates Multivariate Nonnormal Data and Determines How Many Factors to Retain
2018-11-14	RJafroc	Modeling, Analysis, Validation and Visualization of Observer Performance Studies in Diagnostic Radiology
2018-11-14	RJSONIO	Serialize R Objects to JSON, JavaScript Object Notation
2018-11-14	rJST	Joint Sentiment Topic Modelling
2018-11-14	RPyGeo	ArcGIS Geoprocessing via Python
2018-11-14	sdcTable	Methods for Statistical Disclosure Control in Tabular Data
2018-11-14	semdrw	'SEM Shiny'
2018-11-14	sensmediation	Parametric Estimation and Sensitivity Analysis of Direct and Indirect Effects
2018-11-14	smoothROCtime	Smooth Time-Dependent ROC Curve Estimation
2018-11-14	solitude	An Implementation of Isolation Forest
2018-11-14	SolveRationalMatrixEquation	Solve Rational Matrix Equation
2018-11-14	sparklyr.nested	A 'sparklyr' Extension for Nested Data
2018-11-14	tableschema.r	Frictionless Data Table Schema
2018-11-14	vegperiod	Determine Thermal Vegetation Periods
2018-11-14	zipR	Pythonic Zip() for R
2018-11-13	BiocManager	Access the Bioconductor Project Package Repository
2018-11-13	bioset	Convert a Matrix of Raw Values into Nice and Tidy Data
2018-11-13	configr	An Implementation of Parsing and Writing Configuration File (JSON/INI/YAML/TOML)
2018-11-13	dbscan	Density Based Clustering of Applications with Noise (DBSCAN) and Related Algorithms
2018-11-13	deming	Deming, Theil-Sen, Passing-Bablock and Total Least Squares Regression
2018-11-13	DescTools	Tools for Descriptive Statistics
2018-11-13	dimRed	A Framework for Dimensionality Reduction
2018-11-13	drugCombo	Drug Interaction Modeling Based on Loewe Additivity Following Harbron's Approach
2018-11-13	enveomics.R	Various Utilities for Microbial Genomics and Metagenomics
2018-11-13	FateID	Quantification of Fate Bias in Multipotent Progenitors
2018-11-13	helixvis	Visualize Alpha-Helical Peptide Sequences
2018-11-13	MIAmaxent	A Modular, Integrated Approach to Maximum Entropy Distribution Modeling
2018-11-13	multimode	Mode Testing and Exploring
2018-11-13	neonUtilities	Utilities for Working with NEON Data
2018-11-13	pgbart	Bayesian Additive Regression Trees Using Particle Gibbs Sampler and Gibbs/Metropolis-Hastings Sampler
2018-11-13	quadmesh	Quadrangle Mesh
2018-11-13	RaceID	Identification of Cell Types and Inference of Lineage Trees from Single-Cell RNA-Seq Data
2018-11-13	Rmpi	Interface (Wrapper) to MPI (Message-Passing Interface)
2018-11-13	skpr	Design of Experiments Suite: Generate and Evaluate Optimal Designs
2018-11-13	sys	Powerful and Reliable Tools for Running System Commands in R
2018-11-12	bhrcr	Bayesian Hierarchical Regression on Clearance Rates in the Presence of Lag and Tail Phases
2018-11-12	DesignLibrary	Library of Research Designs
2018-11-12	Directional	Directional Statistics
2018-11-12	emuR	Main Package of the EMU Speech Database Management System
2018-11-12	fastLink	Fast Probabilistic Record Linkage with Missing Data
2018-11-12	febr	Free Brazilian Repository for Open Soil Data
2018-11-12	ffmanova	Fifty-Fifty MANOVA
2018-11-12	fingertipsR	Fingertips Data for Public Health
2018-11-12	FSelectorRcpp	'Rcpp' Implementation of 'FSelector' Entropy-Based Feature Selection Algorithms with a Sparse Matrix Support
2018-11-12	googleVis	R Interface to Google Charts
2018-11-12	live	Local Interpretable (Model-Agnostic) Visual Explanations
2018-11-12	MBTAr	Access Data from the Massachusetts Bay Transit Authority (MBTA) Web API
2018-11-12	MetabolomicsBasics	Basic Functions to Investigate Metabolomics Data Matrices
2018-11-12	mlflow	Interface to 'MLflow'
2018-11-12	MLML2R	Maximum Likelihood Estimation of DNA Methylation and Hydroxymethylation Proportions
2018-11-12	model4you	Stratified and Personalised Models Based on Model-Based Trees and Forests
2018-11-12	morse	Modelling Tools for Reproduction and Survival Data in Ecotoxicology
2018-11-12	NCmisc	Miscellaneous Functions for Creating Adaptive Functions and Scripts
2018-11-12	parsnip	A Common API to Modeling and Analysis Functions
2018-11-12	PMCMRplus	Calculate Pairwise Multiple Comparisons of Mean Rank Sums Extended
2018-11-12	PResiduals	Probability-Scale Residuals and Residual Correlations
2018-11-12	QGglmm	Estimate Quantitative Genetics Parameters from Generalised Linear Mixed Models
2018-11-12	qrmtools	Tools for Quantitative Risk Management
2018-11-12	reqres	Powerful Classes for HTTP Requests and Responses
2018-11-12	rmweather	Tools to Conduct Meteorological Normalisation on Air Quality Data
2018-11-12	roptim	General Purpose Optimization in R using C++
2018-11-12	rpostgis	R Interface to a 'PostGIS' Database
2018-11-12	RSAGA	SAGA Geoprocessing and Terrain Analysis
2018-11-12	shinyFiles	A Server-Side File System Viewer for Shiny
2018-11-12	STARTS	Functions for the STARTS Model
2018-11-12	trekfont	Star Trek Fonts Collection
2018-11-12	trialr	Clinical Trial Designs in 'RStan'
2018-11-12	visualFields	Statistical Methods for Visual Fields
2018-11-12	xROI	Delineate Region of Interests (ROI's) and Extract Time-Series Data from Digital Repeat Photography Images
2018-11-11	AMCTestmakeR	Generate LaTeX Code for Auto-Multiple-Choice (AMC)
2018-11-11	BGLR	Bayesian Generalized Linear Regression
2018-11-11	cAIC4	Conditional Akaike Information Criterion for 'lme4'
2018-11-11	expss	Tables with Labels and Some Useful Functions from Spreadsheets and 'SPSS' Statistics
2018-11-11	nandb	Number and Brightness Image Analysis
2018-11-11	phenocamapi	Interacting with the PhenoCam Data and API
2018-11-11	Rcrawler	Web Crawler and Scraper
2018-11-11	reportReg	An Easy Way to Report Regression Analysis
2018-11-11	SpATS	Spatial Analysis of Field Trials with Splines
2018-11-11	tables	Formula-Driven Table Generation
2018-11-11	textcat	N-Gram Based Text Categorization
2018-11-10	aphid	Analysis with Profile Hidden Markov Models
2018-11-10	dplyr	A Grammar of Data Manipulation
2018-11-10	furniture	Furniture for Quantitative Scientists
2018-11-10	gastempt	Analyzing Gastric Emptying from MRI or Scintigraphy
2018-11-10	interep	Interaction Analysis of Repeatedly Measured Data
2018-11-10	jmcm	Joint Mean-Covariance Models using 'Armadillo' and S4
2018-11-10	lme4	Linear Mixed-Effects Models using 'Eigen' and S4
2018-11-10	lslx	Semi-Confirmatory Structural Equation Modeling via Penalized Likelihood
2018-11-10	rcmdcheck	Run 'R CMD check' from 'R' and Capture Results
2018-11-10	REndo	Fitting Linear Models with Endogenous Regressors using Latent Instrumental Variables
2018-11-10	rstanarm	Bayesian Applied Regression Modeling via Stan
2018-11-10	Rtsne	T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation
2018-11-10	Ruchardet	R Package to Detect Character Encoding
2018-11-10	sparkavro	Load Avro file into 'Apache Spark'
2018-11-10	SpatialVS	Spatial Variable Selection
2018-11-10	spTimer	Spatio-Temporal Bayesian Modelling
2018-11-10	VICmodel	The Variable Infiltration Capacity (VIC) Model
2018-11-09	antiword	Extract Text from Microsoft Word Documents
2018-11-09	arsenal	An Arsenal of 'R' Functions for Large-Scale Statistical Summaries
2018-11-09	bayesdfa	Bayesian Dynamic Factor Analysis (DFA) with 'Stan'
2018-11-09	bmlm	Bayesian Multilevel Mediation
2018-11-09	DeclareDesign	Declare and Diagnose Research Designs
2018-11-09	detrendr	Detrend Images
2018-11-09	dfpk	Bayesian Dose-Finding Designs using Pharmacokinetics (PK) for Phase I Clinical Trials
2018-11-09	dtangle	Cell Type Deconvolution from Gene Expressions
2018-11-09	eggCounts	Hierarchical Modelling of Faecal Egg Counts
2018-11-09	finalfit	Quickly Create Elegant Regression Results Tables and Plots when Modelling
2018-11-09	glmmfields	Generalized Linear Mixed Models with Robust Random Fields for Spatiotemporal Modeling
2018-11-09	Gmisc	Descriptive Statistics, Transition Plots, and More
2018-11-09	ibs	Integral of B-Spline Functions
2018-11-09	idefix	Efficient Designs for Discrete Choice Experiments
2018-11-09	idem	Inference in Randomized Controlled Trials with Death and Missingness
2018-11-09	jomo	Multilevel Joint Modelling Multiple Imputation
2018-11-09	linguisticsdown	Easy Linguistics Document Writing with R Markdown
2018-11-09	MALDIrppa	MALDI Mass Spectrometry Data Robust Pre-Processing and Analysis
2018-11-09	modesto	Modeling and Analysis of Stochastic Systems
2018-11-09	Phase123	Simulating and Conducting Phase 123 Trials
2018-11-09	plinkQC	Genotype Quality Control with 'PLINK'
2018-11-09	quickPlot	A System of Plotting Optimized for Speed and Modularity
2018-11-09	Rfast	A Collection of Efficient and Extremely Fast R Functions
2018-11-09	rfishbase	R Interface to 'FishBase'
2018-11-09	rockchalk	Regression Estimation and Presentation
2018-11-09	seqmon	Group Sequential Design Class for Clinical Trials
2018-11-09	simmer	Discrete-Event Simulation for R
2018-11-09	STMotif	Discovery of Motifs in Spatial-Time Series
2018-11-09	survHE	Survival Analysis in Health Economic Evaluation
2018-11-09	TMB	Template Model Builder: A General Random Effect Tool Inspired by 'ADMB'
2018-11-09	tmbstan	MCMC Sampling from 'TMB' Model Object using 'Stan'
2018-11-09	unrtf	Extract Text from Rich Text Format (RTF) Documents
2018-11-09	walker	Bayesian Regression with Time-Varying Coefficients
2018-11-09	ZeBook	Working with Dynamic Models for Agriculture and Environment
2018-11-08	arrangements	Fast Generators and Iterators for Permutations, Combinations and Partitions
2018-11-08	available	Check if the Title of a Package is Available, Appropriate and Interesting
2018-11-08	cgam	Constrained Generalized Additive Model
2018-11-08	collections	High Performance Container Data Types
2018-11-08	conStruct	Models Spatially Continuous and Discrete Population Genetic Structure
2018-11-08	econet	Estimation of Parameter-Dependent Network Centrality Measures
2018-11-08	inlmisc	Miscellaneous Functions for the USGS INL Project Office
2018-11-08	lintr	A 'Linter' for R Code
2018-11-08	MADPop	MHC Allele-Based Differencing Between Populations
2018-11-08	MDFS	MultiDimensional Feature Selection
2018-11-08	mem	The Moving Epidemic Method
2018-11-08	memapp	The Moving Epidemic Method Web Application
2018-11-08	rgeos	Interface to Geometry Engine - Open Source ('GEOS')
2018-11-08	robCompositions	Robust Estimation for Compositional Data
2018-11-08	simstandard	Generate Standardized Data
2018-11-08	sn	The Skew-Normal and Related Distributions Such as the Skew-t
2018-11-08	ssgraph	Bayesian Graphical Estimation using Spike-and-Slab Priors
2018-11-08	synoptReg	Synoptic Climate Classification and Spatial Regionalization of Environmental Data
2018-11-08	variosig	Spatial Dependence Based on Empirical Variograms
2018-11-07	breathteststan	Stan-Based Fit to Gastric Emptying Curves
2018-11-07	colourvalues	Assigns Colours to Values
2018-11-07	elasticsearchr	A Lightweight Interface for Interacting with Elasticsearch from R
2018-11-07	exampletestr	Help for Writing Unit Tests Based on Function Examples
2018-11-07	Factoshiny	Perform Factorial Analysis from 'FactoMineR' with a Shiny Application
2018-11-07	gcookbook	Data for "R Graphics Cookbook"
2018-11-07	gggenes	Draw Gene Arrow Maps in 'ggplot2'
2018-11-07	huxtable	Easily Create and Style Tables for LaTeX, HTML and Other Formats
2018-11-07	Nmisc	Miscellaneous Functions Used at 'Numeract LLC'
2018-11-07	nodiv	Compares the Distribution of Sister Clades Through a Phylogeny
2018-11-07	parfm	Parametric Frailty Models
2018-11-07	promote	Client for the 'Alteryx Promote' API
2018-11-07	Rcpp	Seamless R and C++ Integration
2018-11-07	RgoogleMaps	Overlays on Static Maps
2018-11-07	roxygen2	In-Line Documentation for R
2018-11-07	rquery	Relational Query Generator for Data Manipulation at Scale
2018-11-07	rstan	R Interface to Stan
2018-11-07	RXshrink	Maximum Likelihood Shrinkage via Generalized Ridge or Least Angle Regression
2018-11-07	SARP.compo	Network-Based Interpretation of Changes in Compositional Data
2018-11-07	switchrGist	Publish Package Manifests to GitHub Gists
2018-11-07	tfestimators	Interface to 'TensorFlow' Estimators
2018-11-07	trackr	Semantic Annotation and Discoverability System for R-Based Artifacts
2018-11-07	worrms	World Register of Marine Species (WoRMS) Client
2018-11-06	bigmatch	Making Optimal Matching Size-Scalable Using Optimal Calipers
2018-11-06	blmeco	Data Files and Functions Accompanying the Book "Bayesian Data Analysis in Ecology using R, BUGS and Stan"
2018-11-06	BoSSA	A Bunch of Structure and Sequence Analysis
2018-11-06	CDM	Cognitive Diagnosis Modeling
2018-11-06	CENFA	Climate and Ecological Niche Factor Analysis
2018-11-06	Conigrave	Flexible Tools for Multiple Imputation
2018-11-06	CVXR	Disciplined Convex Optimization
2018-11-06	eegkit	Toolkit for Electroencephalography Data
2018-11-06	endorse	Bayesian Measurement Models for Analyzing Endorsement Experiments
2018-11-06	epiR	Tools for the Analysis of Epidemiological Data
2018-11-06	estimatr	Fast Estimators for Design-Based Inference
2018-11-06	ffbase	Basic Statistical Functions for Package 'ff'
2018-11-06	gestalt	Tools for Making and Combining Functions
2018-11-06	ggtern	An Extension to 'ggplot2', for the Creation of Ternary Diagrams
2018-11-06	gmnl	Multinomial Logit Models with Random Parameters
2018-11-06	GRANCore	Classes and Methods for 'GRANBase'
2018-11-06	hisse	Hidden State Speciation and Extinction
2018-11-06	list	Statistical Methods for the Item Count Technique and List Experiment
2018-11-06	mdmb	Model Based Treatment of Missing Data
2018-11-06	modifiedmk	Modified Versions of Mann Kendall and Spearman's Rho Trend Tests
2018-11-06	MortalityLaws	Parametric Mortality Models, Life Tables and HMD
2018-11-06	oak	Trees Creation and Manipulation
2018-11-06	pander	An R 'Pandoc' Writer
2018-11-06	pbv	Probabilities for Bivariate Normal Distribution
2018-11-06	ps	List, Query, Manipulate System Processes
2018-11-06	Rchoice	Discrete Choice (Binary, Poisson and Ordered) Models with Random Parameters
2018-11-06	roprov	Low-Level Support for Provenance Capture Between in-Memory R Objects
2018-11-06	rsvd	Randomized Singular Value Decomposition
2018-11-06	RVAideMemoire	Testing and Plotting Procedures for Biostatistics
2018-11-06	seqHMM	Hidden Markov Models for Life Sequences and Other Multivariate, Multichannel Categorical Time Series
2018-11-06	shinythemes	Themes for Shiny
2018-11-06	sjmisc	Data and Variable Transformation Functions
2018-11-06	webmockr	Stubbing and Setting Expectations on 'HTTP' Requests
2018-11-06	WVPlots	Common Plots for Analysis
2018-11-06	zCompositions	Treatment of Zeros, Left-Censored and Missing Values in Compositional Data Sets
2018-11-05	anyLib	Install and Load Any Package from CRAN, Bioconductor or Github
2018-11-05	augSIMEX	Analysis of Data with Mixed Measurement Error and Misclassification in Covariates
2018-11-05	autothresholdr	An R Port of the 'ImageJ' Plugin 'Auto Threshold'
2018-11-05	beanz	Bayesian Analysis of Heterogeneous Treatment Effect
2018-11-05	binequality	Methods for Analyzing Binned Income Data
2018-11-05	cgraph	Computational Graphs
2018-11-05	dextergui	A Graphical User Interface for Dexter
2018-11-05	dplR	Dendrochronology Program Library in R
2018-11-05	DT	A Wrapper of the JavaScript Library 'DataTables'
2018-11-05	eulerr	Area-Proportional Euler and Venn Diagrams with Ellipses
2018-11-05	garray	Generalized Array Arithmetic for Ragged Arrays with Named Margins
2018-11-05	GLMMadaptive	Generalized Linear Mixed Models using Adaptive Gaussian Quadrature
2018-11-05	ipc	Tools for Message Passing Between Processes
2018-11-05	ipred	Improved Predictors
2018-11-05	ivtools	Instrumental Variables
2018-11-05	metadynminer	Tools to Read, Analyze and Visualize Metadynamics HILLS Files from 'Plumed'
2018-11-05	pbmcapply	Tracking the Progress of Mc*pply with Progress Bar
2018-11-05	PerseusR	Perseus R Interop
2018-11-05	rAmCharts	JavaScript Charts Tool
2018-11-05	RcmdrPlugin.orloca	A GUI for Planar Location Problems
2018-11-05	rcss	Convex Switching Systems
2018-11-05	reproducer	Reproduce Statistical Analyses and Meta-Analyses
2018-11-05	Rlabkey	Data Exchange Between R and 'LabKey' Server
2018-11-05	robmed	(Robust) Mediation Analysis
2018-11-05	rscorecard	A Method to Download Department of Education College Scorecard Data
2018-11-05	semtree	Recursive Partitioning for Structural Equation Models
2018-11-05	sessioninfo	R Session Information
2018-11-05	shinyWidgets	Custom Inputs Widgets for Shiny
2018-11-05	solrad	Calculating Solar Radiation and Related Variables Based on Location, Time and Topographical Conditions
2018-11-05	spant	MR Spectroscopy Analysis Tools
2018-11-05	TDAstats	Pipeline for Topological Data Analysis
2018-11-05	Thermimage	Thermal Image Analysis
2018-11-05	visvow	Visible Vowels: Visualization of Vowel Variation
2018-11-05	vtreat	A Statistically Sound 'data.frame' Processor/Conditioner
2018-11-05	WRSS	Water Resources System Simulator
2018-11-05	xts	eXtensible Time Series
2018-11-05	yardstick	Tidy Characterizations of Model Performance
2018-11-04	bfw	Bayesian Framework for Computational Modeling
2018-11-04	bigchess	Read, Manipulate and Explore Chess PGN Files
2018-11-04	convevol	Analysis of Convergent Evolution
2018-11-04	KarsTS	An Interface for Microclimate Time Series Analysis
2018-11-04	lattice	Trellis Graphics for R
2018-11-04	lobstr	Visualize R Data Structures with Trees
2018-11-04	MetaLandSim	Landscape and Range Expansion Simulation
2018-11-04	modelgrid	A Framework for Creating, Managing and Training Multiple Caret Models
2018-11-04	rr2	R2s for Regression Models
2018-11-04	sigr	Succinct and Correct Statistical Summaries for Reports
2018-11-04	spatstat	Spatial Point Pattern Analysis, Model-Fitting, Simulation, Tests
2018-11-04	Tejapi	API Wrapper for Taiwan Economic Journal Data Service
2018-11-04	TwoSampleTest.HD	A Two-Sample Test for the Equality of Distributions for High-Dimensional Data
2018-11-04	visTree	Visualization of Subgroups for Decision Trees
2018-11-04	vtree	Display Information About Nested Subsets of a Data Frame
2018-11-03	BPM	Bayesian Purity Model to Estimate Tumor Purity
2018-11-03	EBPRS	Derive Polygenic Risk Score Based on Emprical Bayes Theory
2018-11-03	egg	Extensions for 'ggplot2': Custom Geom, Plot Alignment, Symmetrised Scale, and Fixed Panel Size
2018-11-03	kmeRs	K-Mers Similarity Score Matrix
2018-11-03	memnet	Network Tools for Memory Research
2018-11-03	ModelMetrics	Rapid Calculation of Model Metrics
2018-11-03	numform	Tools to Format Numbers for Publication
2018-11-03	OWEA	Optimal Weight Exchange Algorithm for Optimal Designs for Three Models
2018-11-03	owmr	OpenWeatherMap API Wrapper
2018-11-03	PROMETHEE	Preference Ranking Organization METHod for Enrichment of Evaluations
2018-11-03	raster	Geographic Data Analysis and Modeling
2018-11-03	RProtoBuf	R Interface to the 'Protocol Buffers' 'API' (Version 2 or 3)
2018-11-03	SEMrushR	R Interface to Access the 'SEMrush' API
2018-11-03	tidyRSS	Tidy RSS for R
2018-11-03	urbin	Unifying Estimation Results with Binary Dependent Variables
2018-11-02	auth0	Secure Authentication in Shiny with Auth0
2018-11-02	biostat3	Utility Functions, Datasets and Extended Examples for Survival Analysis
2018-11-02	compareGroups	Descriptive Analysis by Groups
2018-11-02	conf	Visualization and Analysis of Statistical Measures of Confidence
2018-11-02	countcolors	Locates and Counts Pixels Within Color Range(s) in Images
2018-11-02	crov	Constrained Regression Model for an Ordinal Response and Ordinal Predictors
2018-11-02	dexter	Data Management and Analysis of Tests
2018-11-02	dmai	Divisia Monetary Aggregates Index
2018-11-02	fakemake	Mock the Unix Make Utility
2018-11-02	GNAR	Methods for Fitting Network Time Series Models
2018-11-02	halfcircle	Plot Halfcircle Diagram
2018-11-02	HellCor	The Hellinger Correlation
2018-11-02	kofnGA	A Genetic Algorithm for Fixed-Size Subset Selection
2018-11-02	lsmeans	Least-Squares Means
2018-11-02	MARSS	Multivariate Autoregressive State-Space Modeling
2018-11-02	NPHazardRate	Nonparametric Hazard Rate Estimation
2018-11-02	obliqueRSF	Oblique Random Forests for Right-Censored Time-to-Event Data
2018-11-02	parsec	Partial Orders in Socio-Economics
2018-11-02	polylabelr	Find the Pole of Inaccessibility (Visual Center) of a Polygon
2018-11-02	pubh	A Toolbox for Public Health and Epidemiology
2018-11-02	redlistr	Tools for the IUCN Red List of Ecosystems and Species
2018-11-02	SAutomata	Inference and Learning in Stochastic Automata
2018-11-02	shiny	Web Application Framework for R
2018-11-02	tesseract	Open Source OCR Engine
2018-11-02	Tushare	Interface to 'Tushare Pro' API
2018-11-02	VARtests	Tests for Error Autocorrelation, ARCH Errors, and Cointegration in Vector Autoregressive Models
2018-11-02	wosr	Clients to the 'Web of Science' and 'InCites' APIs
2018-11-02	yll	Compute Expected Years of Life Lost (YLL) and Average YLL
2018-11-01	arfima	Fractional ARIMA (and Other Long Memory) Time Series Modeling
2018-11-01	ballr	Access to Current and Historical Basketball Data
2018-11-01	carfima	Continuous-Time Fractionally Integrated ARMA Process for Irregularly Spaced Long-Memory Time Series Data
2018-11-01	checkr	Check the Properties of Common R Objects
2018-11-01	ftsa	Functional Time Series Analysis
2018-11-01	ggiraph	Make 'ggplot2' Graphics Interactive
2018-11-01	hazer	Identifying Foggy and Cloudy Images by Quantifying Haziness
2018-11-01	hutils	Miscellaneous R Functions and Aliases
2018-11-01	kohonen	Supervised and Unsupervised Self-Organising Maps
2018-11-01	MASS	Support Functions and Datasets for Venables and Ripley's MASS
2018-11-01	Matrix	Sparse and Dense Matrix Classes and Methods
2018-11-01	mleap	Interface to 'MLeap'
2018-11-01	NetworkToolbox	Methods and Measures for Brain, Cognitive, and Psychometric Network Analysis
2018-11-01	pkgnet	Get Network Representation of an R Package
2018-11-01	polyglot	Learn Foreign Language Vocabulary
2018-11-01	polymapR	Linkage Analysis in Outcrossing Polyploids
2018-11-01	RcppAnnoy	'Rcpp' Bindings for 'Annoy', a Library for Approximate Nearest Neighbors
2018-11-01	RNeXML	Semantically Rich I/O for the 'NeXML' Format
2018-11-01	RNiftyReg	Image Registration Using the 'NiftyReg' Library
2018-11-01	rstpm2	Generalized Survival Models
2018-11-01	shotGroups	Analyze Shot Group Data
2018-10-31	arkdb	Archive and Unarchive Databases Using Flat Files
2018-10-31	automultinomial	Models for Spatially Correlated Data
2018-10-31	blavaan	Bayesian Latent Variable Analysis
2018-10-31	customLayout	Arrange Elements on the R's Drawing Area or Inside the PowerPoint's Slide
2018-10-31	fds	Functional Data Sets
2018-10-31	flextable	Functions for Tabular Reporting
2018-10-31	germinationmetrics	Seed Germination Indices and Curve Fitting
2018-10-31	gibble	Geometry Decomposition
2018-10-31	HMP	Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP
2018-10-31	ijtiff	Comprehensive TIFF I/O with Full Support for 'ImageJ' TIFF Files
2018-10-31	logisticRR	Adjusted Relative Risk from Logistic Regression
2018-10-31	mvord	Multivariate Ordinal Regression Models
2018-10-31	psych	Procedures for Psychological, Psychometric, and Personality Research
2018-10-31	RcppTOML	'Rcpp' Bindings to Parser for Tom's Obvious Markup Language
2018-10-31	reinforcedPred	Reinforced Risk Prediction with Budget Constraint
2018-10-31	restriktor	Restricted Statistical Estimation and Inference for Linear Models
2018-10-31	RImpact	Calculates Measures of Scholarly Impact
2018-10-31	shallot	Random Partition Distribution Indexed by Pairwise Information
2018-10-31	spatstat.utils	Utility Functions for 'spatstat'
2018-10-31	textmineR	Functions for Text Mining and Topic Modeling
2018-10-31	ViSiElse	A Visual Tool for Behavior Analysis
2018-10-30	aire.zmvm	Download Mexico City Pollution, Wind, and Temperature Data
2018-10-30	AMModels	Adaptive Management Model Manager
2018-10-30	BAS	Bayesian Variable Selection and Model Averaging using Bayesian Adaptive Sampling
2018-10-30	BCRA	Breast Cancer Risk Assessment
2018-10-30	biva	Business Intelligence
2018-10-30	chngpt	Estimation and Hypothesis Testing for Threshold Regression
2018-10-30	contextual	Simulation and Analysis of Contextual Multi-Armed Bandit Policies
2018-10-30	cpt	Classification Permutation Test
2018-10-30	dbx	A Fast, Easy-to-Use Database Interface
2018-10-30	distreg.vis	Framework for the Visualization of Distributional Regression Models
2018-10-30	export	Streamlined Export of Graphs and Data Tables
2018-10-30	filesstrings	Handy File and String Manipulation
2018-10-30	freetypeharfbuzz	Deterministic Computation of Text Box Metrics
2018-10-30	GDINA	The Generalized DINA Model Framework
2018-10-30	GHS	Graphical Horseshoe MCMC Sampler Using Data Augmented Block Gibbs Sampler
2018-10-30	graphframes	Interface for 'GraphFrames'
2018-10-30	gremlin	Mixed-Effects REML Incorporating Generalized Inverses
2018-10-30	greta	Simple and Scalable Statistical Modelling in R
2018-10-30	hero	Sandwich Smoother
2018-10-30	ibmsunburst	Generate Personality Insights Sunburst Diagrams
2018-10-30	intoo	Object Oriented Intelligence
2018-10-30	lass0	Lasso-Zero for (High-Dimensional) Linear Regression
2018-10-30	LearningRlab	Statistical Learning Functions
2018-10-30	lemon	Freshing Up your 'ggplot2' Plots
2018-10-30	LPWC	Lag Penalized Weighted Correlation for Time Series Clustering
2018-10-30	malariaAtlas	An R Interface to Open-Access Malaria Data, Hosted by the 'Malaria Atlas Project'
2018-10-30	mapi	Mapping Averaged Pairwise Information
2018-10-30	matrixNormal	The Matrix Normal Distribution
2018-10-30	modeest	Mode Estimation
2018-10-30	mudens	Density Estimate
2018-10-30	namer	Names Your 'R Markdown' Chunks
2018-10-30	oem	Orthogonalizing EM: Penalized Regression for Big Tall Data
2018-10-30	pksensi	Global Sensitivity Analysis in Pharmacokinetic Modeling
2018-10-30	politeness	Detecting Politeness Features in Text
2018-10-30	PROSPER	Simulation of Weed Population Dynamics
2018-10-30	QDComparison	Modern Nonparametric Tools for Two-Sample Quantile and Distribution Comparisons
2018-10-30	ratematrix	Bayesian Estimation of the Evolutionary Rate Matrix
2018-10-30	RCzechia	Spatial Objects of the Czech Republic
2018-10-30	remotes	R Package Installation from Remote Repositories, Including 'GitHub'
2018-10-30	REPLesentR	Presentations in the REPL
2018-10-30	rpact	Confirmatory Adaptive Clinical Trial Design and Analysis
2018-10-30	scriptexec	Execute Native Scripts
2018-10-30	sdols	Summarizing Distributions of Latent Structures
2018-10-30	sdStaf	Species Distribution and Stability Future Models
2018-10-30	siebanxicor	Query Data Series from Bank of Mexico
2018-10-30	sleepr	Analyse Activity and Sleep Behaviour
2018-10-30	sloop	Helpers for 'OOP' in R
2018-10-30	tbltools	Tools for Working with Tibbles
2018-10-30	temperatureresponse	Temperature Response
2018-10-30	Ternary	An R Package for Creating Ternary Plots
2018-10-30	tm1r	The Integration Between 'IBM COGNOS TM1' and R
2018-10-30	TSDT	Treatment-Specific Subgroup Detection Tool
2018-10-30	ttestshiny	Ttest Shiny
2018-10-30	vennLasso	Variable Selection for Heterogeneous Populations
2018-10-30	zbank	'ZooBank' API Client
2018-10-29	AnthropMMD	An R-Shiny Application for Smith's Mean Measure of Divergence (MMD)
2018-10-29	bucky	Bucky's Archive for Data Analysis in the Social Sciences
2018-10-29	clusterSEs	Calculate Cluster-Robust p-Values and Confidence Intervals
2018-10-29	condformat	Conditional Formatting in Data Frames
2018-10-29	corr2D	Implementation of 2D Correlation Analysis in R
2018-10-29	dexterMST	CML Calibration of Multi Stage Tests
2018-10-29	DiceDesign	Designs of Computer Experiments
2018-10-29	dsa	Seasonal Adjustment of Daily Time Series
2018-10-29	ecotox	Analysis of Ecotoxicology
2018-10-29	err	Customizable Object Sensitive Messages
2018-10-29	ggspectra	Extensions to 'ggplot2' for Radiation Spectra
2018-10-29	InSilicoVA	Probabilistic Verbal Autopsy Coding with 'InSilicoVA' Algorithm
2018-10-29	L0Learn	Fast Algorithms for Best Subset Selection
2018-10-29	mmmgee	Simultaneous Inference for Multiple Linear Contrasts in GEE Models
2018-10-29	pkgload	Simulate Package Installation and Attach
2018-10-29	psychReport	Reproducible Reports in Psychology
2018-10-29	qualpalr	Automatic Generation of Qualitative Color Palettes
2018-10-29	RColetum	Access your Coletum's Data from API
2018-10-29	ROI.plugin.ecos	'ECOS' Plugin for the 'R' Optimization Infrastructure
2018-10-29	rsparkling	R Interface for H2O Sparkling Water
2018-10-29	strip	Lighten your R Model Outputs
2018-10-29	Tariff	Replicate Tariff Method for Verbal Autopsy
2018-10-28	atmopt	Analysis-of-Marginal-Tail-Means
2018-10-28	atus	American Time Use Survey Data
2018-10-28	blsAPI	Request Data from the U.S. Bureau of Labor Statistics API
2018-10-28	c14bazAAR	Download and Prepare C14 Dates from Different Source Databases
2018-10-28	compboost	C++ Implementation of Component-Wise Boosting
2018-10-28	CountsEPPM	Mean and Variance Modeling of Count Data
2018-10-28	crimedata	Access Crime Data from the Open Crime Database
2018-10-28	ebimetagenomics	EBI Metagenomics Portal
2018-10-28	extremis	Statistics of Extremes
2018-10-28	frequency	Easy Frequency Tables
2018-10-28	koRpus	An R Package for Text Analysis
2018-10-28	kza	Kolmogorov-Zurbenko Adaptive Filters
2018-10-28	NitrogenUptake2016	Data and Source Code From: Nitrogen Uptake and Allocation Estimates for Spartina Alterniflora and Distichlis Spicata
2018-10-28	nlstimedist	Non-Linear Model Fitting of Time Distribution of Biological Phenomena
2018-10-28	orloca.es	Spanish version of orloca package. Modelos de localizacion en investigacion operativa
2018-10-28	PCRedux	Quantitative Polymerase Chain Reaction (qPCR) Data Mining and Machine Learning Helper Tool
2018-10-28	pgsc	Computes Powell's Generalized Synthetic Control Estimator
2018-10-28	PkgsFromFiles	Finding and Installing Packages Used in R and RMarkdown Files
2018-10-28	plfm	Probabilistic Latent Feature Analysis
2018-10-28	PMwR	Portfolio Management with R
2018-10-28	poissonMT	Robust M-Estimators Based on Transformations for Poisson Model
2018-10-28	RcppDist	'Rcpp' Integration of Additional Probability Distributions
2018-10-28	rhmc	Hamiltonian Monte Carlo
2018-10-28	sboost	Machine Learning with AdaBoost on Decision Stumps
2018-10-28	shinyhelper	Easily Add Markdown Help Files to 'shiny' App Elements
2018-10-28	spatialrisk	Calculating Concentration Risk under Solvency II
2018-10-28	spectrolab	Class and Methods for Hyperspectral Data
2018-10-28	tidyr	Easily Tidy Data with 'spread()' and 'gather()' Functions
2018-10-28	tidytransit	Read, Validate, Analyze, and Map Files in the General Transit Feed Specification
2018-10-28	uavRmp	UAV Mission Planner
2018-10-28	vistime	Pretty Timeline Creation
2018-10-27	ASMap	Linkage Map Construction using the MSTmap Algorithm
2018-10-27	camtrapR	Camera Trap Data Management and Preparation of Occupancy and Spatial Capture-Recapture Analyses
2018-10-27	countrycode	Convert Country Names and Country Codes
2018-10-27	dub	Unpacking Assignment for Lists via Pattern Matching
2018-10-27	ggspatial	Spatial Data Framework for ggplot2
2018-10-27	orloca	Operations Research LOCational Analysis Models
2018-10-27	palasso	Paired Lasso Regression
2018-10-27	RcppRedis	'Rcpp' Bindings for 'Redis' using the 'hiredis' Library
2018-10-27	Rwhois	WHOIS Server Querying
2018-10-26	barsurf	Minimal Bar Plots and Surface Plots in 3D
2018-10-26	BayesS5	Bayesian Variable Selection Using Simplified Shotgun Stochastic Search with Screening (S5)
2018-10-26	bivgeom	Roy's Bivariate Geometric Distribution
2018-10-26	bold	Interface to Bold Systems API
2018-10-26	commonsMath	JAR Files of the Apache Commons Mathematics Library
2018-10-26	devtools	Tools to Make Developing R Packages Easier
2018-10-26	docopulae	Optimal Designs for Copula Models
2018-10-26	emmeans	Estimated Marginal Means, aka Least-Squares Means
2018-10-26	epimdr	Functions and Data for "Epidemics: Models and Data in R"
2018-10-26	EventDetectR	Event Detection Framework
2018-10-26	FinePop	Fine-Scale Population Analysis
2018-10-26	firebehavioR	Prediction of Wildland Fire Behavior and Hazard
2018-10-26	forestmangr	Functions for Forest Mensuration and Management
2018-10-26	hablar	Convert Data Types and Get Non-Astonishing Results
2018-10-26	HCR	Causal Discovery from Discrete Data using Hidden Compact Representation
2018-10-26	HierDpart	Partitioning Hierarchical Diversity and Differentiation Across Metrics and Scales, from Genes to Ecosystems
2018-10-26	latexpdf	Convert Tables to PDF or PNG
2018-10-26	link2GI	Linking Geographic Information Systems, Remote Sensing and Other Command Line Tools
2018-10-26	loa	Lattice Options and Add-Ins
2018-10-26	lsbs	Bandwidth Selection for Level Sets and HDR Estimation
2018-10-26	ncmeta	Straightforward 'NetCDF' Metadata
2018-10-26	pingers	Identify, Ping, and Log Internet Provider Connection Data
2018-10-26	qsort	Scoring Q-Sort Data
2018-10-26	reportr	A General Message and Error Reporting System
2018-10-26	rgsp	Repetitive Group Sampling Plan Based on Cpk
2018-10-26	rtsdata	R Time Series Intelligent Data Storage
2018-10-26	RWeightedKmeans	Weighted Object k-Means Algorithm
2018-10-26	SAMCpack	Stochastic Approximation Monte Carlo (SAMC) Sampler and Methods
2018-10-26	sbl	Sparse Bayesian Learning for QTL Mapping and Genome-Wide Association Studies
2018-10-26	slouch	Stochastic Linear Ornstein-Uhlenbeck Comparative Hypotheses
2018-10-26	SmallCountRounding	Small Count Rounding of Tabular Data
2018-10-26	spatsoc	Group Animal Relocation Data by Spatial and Temporal Relationship
2018-10-26	SuperExactTest	Exact Test and Visualization of Multi-Set Intersections
2018-10-26	SuperPCA	Supervised Principal Component Analysis
2018-10-25	AgreementInterval	Agreement Interval of Two Measurement Methods
2018-10-25	compareDF	Do a Git Style Diff of the Rows Between Two Dataframes with Similar Structure
2018-10-25	dae	Functions Useful in the Design and ANOVA of Experiments
2018-10-25	dhglm	Double Hierarchical Generalized Linear Models
2018-10-25	electoral	Allocating Seats Methods and Party System Scores
2018-10-25	ggplot2	Create Elegant Data Visualisations Using the Grammar of Graphics
2018-10-25	JuliaCall	Seamless Integration Between R and 'Julia'
2018-10-25	mdhglm	Multivariate Double Hierarchical Generalized Linear Models
2018-10-25	microdemic	'Microsoft Academic' API Client
2018-10-25	MODIS	Acquisition and Processing of MODIS Products
2018-10-25	np	Nonparametric Kernel Smoothing Methods for Mixed Data Types
2018-10-25	ParallelLogger	Support for Parallel Computation, Logging, and Function Automation
2018-10-25	PhenotypeSimulator	Flexible Phenotype Simulation from Different Genetic and Noise Models
2018-10-25	PPCI	Projection Pursuit for Cluster Identification
2018-10-25	rbison	Interface to the 'USGS' 'BISON' API
2018-10-25	reactR	React Helpers
2018-10-25	rem	Relational Event Models (REM)
2018-10-25	rlang	Functions for Base Types and Core R and 'Tidyverse' Features
2018-10-25	rlas	Read and Write 'las' and 'laz' Binary File Formats Used for Remote Sensing Data
2018-10-25	sitree	Single Tree Simulator
2018-10-25	solvebio	The Official SolveBio API Client
2018-10-25	SPUTNIK	SPatially aUTomatic deNoising for Ims toolKit
2018-10-25	stars	Scalable, Spatiotemporal Tidy Arrays
2018-10-25	texPreview	Compile and Preview Snippets of 'LaTeX' in 'RStudio'
2018-10-25	vegan	Community Ecology Package
2018-10-25	vegan3d	Static and Dynamic 3D Plots for the 'vegan' Package
2018-10-24	binnednp	Nonparametric Estimation for Interval-Grouped Data
2018-10-24	CoordinateCleaner	Automated Cleaning of Occurrence Records from Biological Collections
2018-10-24	d3r	'd3.js' Utilities for R
2018-10-24	DataPackageR	Construct Reproducible Analytic Data Sets as R Packages
2018-10-24	DBfit	A Double Bootstrap Method for Analyzing Linear Models with Autoregressive Errors
2018-10-24	DiPhiSeq	Robust Tests for Differential Dispersion and Differential Expression in RNA-Sequencing Data
2018-10-24	dodgr	Distances on Directed Graphs
2018-10-24	Equalden.HD	Testing the Equality of a High Dimensional Set of Densities
2018-10-24	FourScores	A Game for Human vs. Human or Human vs. AI
2018-10-24	ggwordcloud	A Word Cloud Geom for 'ggplot2'
2018-10-24	gProfileR	Interface to the 'g:Profiler' Toolkit
2018-10-24	GroupComparisons	Paired/Unpaired Parametric/Non-Parametric Group Comparisons
2018-10-24	gStream	Graph-Based Sequential Change-Point Detection for Streaming Data
2018-10-24	inpdfr	Analyse Text Documents Using Ecological Tools
2018-10-24	mathgraph	Directed and Undirected Graphs
2018-10-24	mmpf	Monte-Carlo Methods for Prediction Functions
2018-10-24	msgl	Multinomial Sparse Group Lasso
2018-10-24	mvLSW	Multivariate, Locally Stationary Wavelet Process Estimation
2018-10-24	NetworkInference	Inferring Latent Diffusion Networks
2018-10-24	nipals	Principal Components Analysis using NIPALS with Gram-Schmidt Orthogonalization
2018-10-24	rsinaica	Download Data from Mexico's Air Quality Information System
2018-10-24	rsMove	Guidelines for the use of Remote Sensing in Movement Ecology
2018-10-24	seacarb	Seawater Carbonate Chemistry
2018-10-24	sf	Simple Features for R
2018-10-24	sparcl	Perform Sparse Hierarchical Clustering and Sparse K-Means Clustering
2018-10-24	taskscheduleR	Schedule R Scripts and Processes with the Windows Task Scheduler
2018-10-24	trackdem	Particle Tracking and Demography
2018-10-24	txtq	A Small Message Queue for Parallel Processes
2018-10-24	vegdata	Access Vegetation Databases and Treat Taxonomy
2018-10-24	WGCNA	Weighted Correlation Network Analysis
2018-10-23	analogue	Analogue and Weighted Averaging Methods for Palaeoecology
2018-10-23	blogdown	Create Blogs and Websites with R Markdown
2018-10-23	brms	Bayesian Regression Models using 'Stan'
2018-10-23	DEploid	Deconvolute Mixed Genomes with Unknown Proportions
2018-10-23	extraDistr	Additional Univariate and Multivariate Distributions
2018-10-23	geodetector	Stratified Heterogeneity Measure, Dominant Driving Force Detection, Interaction Relationship Investigation
2018-10-23	isdparser	Parse 'NOAA' Integrated Surface Data Files
2018-10-23	kyotil	Utility Functions for Statistical Analysis Report Generation and Monte Carlo Studies
2018-10-23	prettyR	Pretty Descriptive Stats
2018-10-23	projpred	Projection Predictive Feature Selection
2018-10-23	PSPManalysis	Analysis of Physiologically Structured Population Models
2018-10-23	reshape	Flexibly Reshape Data
2018-10-23	RMixpanel	API for Mixpanel
2018-10-23	RPresto	DBI Connector to Presto
2018-10-23	servr	A Simple HTTP Server to Serve Static Files or Dynamic Documents
2018-10-23	SuperRanker	Sequential Rank Agreement
2018-10-23	tinytex	Helper Functions to Install and Maintain 'TeX Live', and Compile 'LaTeX' Documents
2018-10-23	tsmp	Time Series with Matrix Profile
2018-10-23	websearchr	Access Domains and Search Popular Websites
2018-10-23	xaringan	Presentation Ninja
2018-10-23	xfun	Miscellaneous Functions by 'Yihui Xie'
2018-10-22	BALD	Robust Loss Development Using MCMC
2018-10-22	bikedata	Download and Aggregate Data from Public Hire Bicycle Systems
2018-10-22	BreedingSchemeLanguage	Describe and Simulate Breeding Schemes
2018-10-22	DataVisualizations	Visualizations of High-Dimensional Data
2018-10-22	dLagM	Time Series Regression Models with Distributed Lag Models
2018-10-22	dynamichazard	Dynamic Hazard Models using State Space Models
2018-10-22	episheet	Rothman's Episheet
2018-10-22	epubr	Read EPUB File Metadata and Text
2018-10-22	fclust	Fuzzy Clustering
2018-10-22	fiery	A Lightweight and Flexible Web Framework
2018-10-22	FishResp	Analytical Tool for Aquatic Respirometry
2018-10-22	gamlss.tr	Generating and Fitting Truncated ‘gamlss.family’ Distributions
2018-10-22	jqr	Client for 'jq', a 'JSON' Processor
2018-10-22	lolog	Latent Order Logistic Graph Models
2018-10-22	meteoland	Landscape Meteorology Tools
2018-10-22	mirtCAT	Computerized Adaptive Testing with Multidimensional Item Response Theory
2018-10-22	Nonpareil	Metagenome Coverage Estimation and Projections for 'Nonpareil'
2018-10-22	osmdata	Import 'OpenStreetMap' Data as Simple Features or Spatial Objects
2018-10-22	pacman	Package Management Tool
2018-10-22	pkmon	Least-Squares Estimator under k-Monotony Constraint for Discrete Functions
2018-10-22	RcppCWB	'Rcpp' Bindings for the 'Corpus Workbench' ('CWB')
2018-10-22	regsem	Regularized Structural Equation Modeling
2018-10-22	reReg	Recurrent Event Regression
2018-10-22	statnet	Software Tools for the Statistical Analysis of Network Data
2018-10-22	tidybayes	Tidy Data and 'Geoms' for Bayesian Models
2018-10-22	xlm	A 'Stellar' Client
2018-10-21	assertive.code	Assertions to Check Properties of Code
2018-10-21	assertive.data.uk	Assertions to Check Properties of Strings
2018-10-21	assertive.data.us	Assertions to Check Properties of Strings
2018-10-21	assertive.models	Assertions to Check Properties of Models
2018-10-21	boral	Bayesian Ordination and Regression AnaLysis
2018-10-21	bridgesampling	Bridge Sampling for Marginal Likelihoods and Bayes Factors
2018-10-21	broom.mixed	Tidying Methods for Mixed Models
2018-10-21	cdata	Fluid Data Transformations
2018-10-21	changer	Change R Package Name
2018-10-21	crfsuite	Conditional Random Fields for Labelling Sequential Data in Natural Language Processing
2018-10-21	eeptools	Convenience Functions for Education Data
2018-10-21	ggalluvial	Alluvial Diagrams in 'ggplot2'
2018-10-21	icr	Compute Krippendorff's Alpha
2018-10-21	PracTools	Tools for Designing and Weighting Survey Samples
2018-10-21	pricesensitivitymeter	Van Westendorp Price Sensitivity Meter Analysis
2018-10-21	RApiDatetime	R API Datetime
2018-10-21	scBio	Single Cell Genomics for Enhancing Cell Composition Inference from Bulk Genomics Data
2018-10-21	sglOptim	Generic Sparse Group Lasso Solver
2018-10-20	ClustVarLV	Clustering of Variables Around Latent Variables
2018-10-20	CNVScope	A Versatile Toolkit for Copy Number Variation Relationship Data Analysis and Visualization
2018-10-20	deal	Learning Bayesian Networks with Mixed Variables
2018-10-20	lexicon	Lexicons for Text Analysis
2018-10-20	opensensmapr	Client for the Data API of openSenseMap.org
2018-10-20	rmcfs	The MCFS-ID Algorithm for Feature Selection and Interdependency Discovery
2018-10-20	sentimentr	Calculate Text Polarity Sentiment
2018-10-20	stplanr	Sustainable Transport Planning
2018-10-19	arena2r	Plots, Summary Statistics and Tools for Arena Simulation Users
2018-10-19	bamboo	Protein Secondary Structure Prediction Using the Bamboo Method
2018-10-19	ciTools	Confidence or Prediction Intervals, Quantiles, and Probabilities for Statistical Models
2018-10-19	cjoint	AMCE Estimator for Conjoint Experiments
2018-10-19	DataExplorer	Data Explorer
2018-10-19	dendextend	Extending 'dendrogram' Functionality in R
2018-10-19	EMMIXmfa	Mixture Models with Component-Wise Factor Analyzers
2018-10-19	fulltext	Full Text of 'Scholarly' Articles Across Many Data Sources
2018-10-19	gcForest	Deep Forest Model
2018-10-19	HextractoR	Integrated Tool for Hairping Extraction of RNA Sequences
2018-10-19	HSDiC	Homogeneity and Sparsity Detection Incorporating Prior Constraint Information
2018-10-19	JMI	Jackknife Mutual Information
2018-10-19	khroma	Colour Schemes for Archaeological Data Visualization
2018-10-19	linkprediction	Link Prediction Methods
2018-10-19	logmult	Log-Multiplicative Models, Including Association Models
2018-10-19	maximin	Sequential Space-Filling Design under the Criterion of Maximin Distance
2018-10-19	MGLM	Multivariate Response Generalized Linear Models
2018-10-19	MPS	Estimating Through the Maximum Product Spacing Approach
2018-10-19	pmatch	Pattern Matching
2018-10-19	poliscidata	Datasets and Functions Featured in Pollock and Edwards, An R Companion to Essentials of Political Analysis, Second Edition
2018-10-19	radtools	Utilities for Smooth Navigation of Medical Image Data
2018-10-19	rgbif	Interface to the Global 'Biodiversity' Information Facility API
2018-10-19	rjags	Bayesian Graphical Models using MCMC
2018-10-19	RNifti	Fast R and C++ Access to NIfTI Images
2018-10-19	rTephra	Tephra Transport Modeling
2018-10-19	rts	Raster Time Series Analysis
2018-10-19	sizeMat	Estimate Size at Sexual Maturity
2018-10-19	snowboot	Bootstrap Methods for Network Inference
2018-10-19	SpecDetec	Change Points Detection with Spectral Clustering
2018-10-19	stratEst	Strategy Estimation
2018-10-19	tigger	Infers Novel Immunoglobulin Alleles from Sequencing Data
2018-10-19	vcr	Record 'HTTP' Calls to Disk
2018-10-19	webTRISr	A Wrapper Around 'WebTRIS' Traffic Flow API from Highways England
2018-10-19	wikitaxa	Taxonomic Information from 'Wikipedia'
2018-10-19	xtensor	Headers for the 'xtensor' Library
2018-10-18	ABPS	The Abnormal Blood Profile Score to Detect Blood Doping
2018-10-18	antaresRead	Import, Manipulate and Explore the Results of an 'Antares' Simulation
2018-10-18	betapart	Partitioning Beta Diversity into Turnover and Nestedness Components
2018-10-18	blocksdesign	Nested and Crossed Block Designs for Factorial, Fractional Factorial and Unstructured Treatment Sets
2018-10-18	BMSC	Bayesian Model Selection under Constraints
2018-10-18	bsplinePsd	Bayesian Nonparametric Spectral Density Estimation Using B-Spline Priors
2018-10-18	BWStest	Baumgartner Weiss Schindler Test of Equal Distributions
2018-10-18	charlatan	Make Fake Data
2018-10-18	covr	Test Coverage for Packages
2018-10-18	eva	Extreme Value Analysis with Goodness-of-Fit Testing
2018-10-18	evaluator	Quantified Risk Assessment Toolkit
2018-10-18	hNMF	Hierarchical Non-Negative Matrix Factorization
2018-10-18	KODAMA	Knowledge Discovery by Accuracy Maximization
2018-10-18	metaSEM	Meta-Analysis using Structural Equation Modeling
2018-10-18	microbenchmark	Accurate Timing Functions
2018-10-18	nasapower	'NASA' 'POWER' 'API' Client
2018-10-18	NLP	Natural Language Processing Infrastructure
2018-10-18	NLPutils	Natural Language Processing Utilities
2018-10-18	onewaytests	One-Way Tests in Independent Groups Designs
2018-10-18	pmhtutorial	Minimal Working Examples for Particle Metropolis-Hastings
2018-10-18	PowerUpR	Power Analysis Tools for Multilevel Randomized Experiments
2018-10-18	psidR	Build Panel Data Sets from PSID Raw Data
2018-10-18	PWEALL	Design and Monitoring of Survival Trials Accounting for Complex Situations
2018-10-18	rainbow	Bagplots, Boxplots and Rainbow Plots for Functional Data
2018-10-18	sdpt3r	Semi-Definite Quadratic Linear Programming Solver
2018-10-18	seminr	Domain-Specific Language for Building PLS Structural Equation Models
2018-10-18	smam	Statistical Modeling of Animal Movements
2018-10-18	smbinning	Scoring Modeling and Optimal Binning
2018-10-18	storr	Simple Key Value Stores
2018-10-18	Surrogate	Evaluation of Surrogate Endpoints in Clinical Trials
2018-10-17	BBI	Benthic Biotic Indices Calculation from Composition Data
2018-10-17	BimodalIndex	The Bimodality Index
2018-10-17	breathtestcore	Core Functions to Read and Fit 13c Time Series from Breath Tests
2018-10-17	BuyseTest	Generalized Pairwise Comparisons
2018-10-17	clickR	Fix Data and Create Report Tables from Different Objects
2018-10-17	dataPreparation	Automated Data Preparation
2018-10-17	DeLorean	Estimates Pseudotimes for Single Cell Expression Data
2018-10-17	DynamicGP	Modelling and Analysis of Dynamic Computer Experiments
2018-10-17	fergm	Estimation and Fit Assessment of Frailty Exponential Random Graph Models
2018-10-17	future	Unified Parallel and Distributed Processing in R for Everyone
2018-10-17	GenAlgo	Classes and Methods to Use Genetic Algorithms for Feature Selection
2018-10-17	gofCopula	Goodness-of-Fit Tests for Copulae
2018-10-17	HRM	High-Dimensional Repeated Measures
2018-10-17	iprior	Regression Modelling using I-Priors
2018-10-17	MAINT.Data	Model and Analyse Interval Data
2018-10-17	MSEtool	Management Strategy Evaluation Toolkit
2018-10-17	nhanesA	NHANES Data Retrieval
2018-10-17	optweight	Targeted Stable Balancing Weights Using Optimization
2018-10-17	pinyin	Convert Chinese Characters into Pinyin, Sijiao, Wubi or Other Codes
2018-10-17	pivottabler	Create Pivot Tables in R
2018-10-17	QTL.gCIMapping	QTL Genome-Wide Composite Interval Mapping
2018-10-17	redist	Markov Chain Monte Carlo Methods for Redistricting Simulation
2018-10-17	RSGHB	Functions for Hierarchical Bayesian Estimation: A Flexible Approach
2018-10-17	rzeit2	Client for the ZEIT ONLINE Content API
2018-10-17	shinydashboard	Create Dashboards with 'Shiny'
2018-10-17	ShortForm	Automatic Short Form Creation
2018-10-17	Thresher	Threshing and Reaping for Principal Components
2018-10-17	tidytext	Text Mining using 'dplyr', 'ggplot2', and Other Tidy Tools
2018-10-17	ukgasapi	API for UK Gas Market Information
2018-10-16	ActisoftR	A Toolbox for Parsing Scored Actigraphy Data
2018-10-16	apa	Format Outputs of Statistical Tests According to APA Guidelines
2018-10-16	bcROCsurface	Bias-Corrected Methods for Estimating the ROC Surface of Continuous Diagnostic Tests
2018-10-16	bnlearn	Bayesian Network Structure Learning, Parameter Learning and Inference
2018-10-16	bookdownplus	Generate Assorted Books and Documents with R 'bookdown' Package
2018-10-16	carrier	Isolate Functions for Remote Execution
2018-10-16	DEVis	A Differential Expression Analysis Toolkit for Visual Analytics and Data Aggregation
2018-10-16	did	Treatment Effects with Multiple Periods and Groups
2018-10-16	grattan	Australian Tax Policy Analysis
2018-10-16	HelpersMG	Tools for Earth Meteorological Analysis
2018-10-16	logNormReg	log Normal Linear Regression
2018-10-16	Minirand	Minimization Randomization
2018-10-16	MtreeRing	A Shiny Application for Automatic Measurements of Tree-Ring Widths on Digital Images
2018-10-16	pkgbuild	Find Tools Needed to Build R Packages
2018-10-16	queuecomputer	Computationally Efficient Queue Simulation
2018-10-16	rangeModelMetadata	Provides Templates for Metadata Files Associated with Species Range Models
2018-10-16	RcmdrPlugin.UCA	UCA Rcmdr Plug-in
2018-10-16	rgdal	Bindings for the 'Geospatial' Data Abstraction Library
2018-10-16	rIP	Detects Fraud in Online Surveys by Tracing and Scoring IP Addresses
2018-10-16	rmapshaper	Client for 'mapshaper' for 'Geospatial' Operations
2018-10-16	samr	SAM: Significance Analysis of Microarrays
2018-10-16	SitesInterest	Inferring an Animal's Sites of Interest from High Resolution Data
2018-10-16	warbleR	Streamline Bioacoustic Analysis
2018-10-16	weights	Weighting and Weighted Statistics
2018-10-15	AlphaSimR	Breeding Program Simulations
2018-10-15	asymmetry	Multidimensional Scaling of Asymmetric Data
2018-10-15	clusterRepro	Reproducibility of Gene Expression Clusters
2018-10-15	cobiclust	Biclustering via Latent Block Model Adapted to Overdispersed Count Data
2018-10-15	cosinor2	Extended Tools for Cosinor Analysis of Rhythms
2018-10-15	crminer	Fetch 'Scholary' Full Text from 'Crossref'
2018-10-15	decisionSupport	Quantitative Support of Decision Making under Uncertainty
2018-10-15	define	Create FDA-Style Data and Program Definitions
2018-10-15	dslabs	Data Science Labs
2018-10-15	hdme	High-Dimensional Regression with Measurement Error
2018-10-15	icenReg	Regression Models for Interval Censored Data
2018-10-15	LipidMS	Lipid Annotation for LC-MS/MS DIA Data
2018-10-15	marmap	Import, Plot and Analyze Bathymetric and Topographic Data
2018-10-15	optimParallel	Parallel Versions of the Gradient-Based optim() Methods
2018-10-15	ppgmmga	Projection Pursuit Based on Gaussian Mixtures and Evolutionary Algorithms
2018-10-15	readJDX	Import Data in the JCAMP-DX Format
2018-10-15	stormwindmodel	Model Tropical Cyclone Wind Speeds
2018-10-15	ungroup	Penalized Composite Link Model for Efficient Estimation of Smooth Distributions from Coarsely Binned Data
2018-10-14	analytics	Regression Outlier Detection, Stationary Bootstrap, Testing Weak Stationarity, NA Imputation, and Other Tools for Data Analysis
2018-10-14	carbonate	Interact with 'carbon.js'
2018-10-14	EZtune	Tunes AdaBoost, Support Vector Machines, and Gradient Boosting Machines
2018-10-14	galgo	Genetic Algorithms for Multivariate Statistical Models from Large-Scale Functional Genomics Data
2018-10-14	GetDFPData	Reading Annual Financial Reports from Bovespa's DFP, FRE and FCA System
2018-10-14	Immigrate	Iterative Max-Min Entropy Margin-Maximization with Interaction Terms for Feature Selection
2018-10-14	imputeR	A General Multivariate Imputation Framework
2018-10-14	jjb	Balamuta Miscellaneous
2018-10-14	MLGL	Multi-Layer Group-Lasso
2018-10-14	nprotreg	Nonparametric Rotations for Sphere-Sphere Regression
2018-10-14	nvmix	Multivariate Normal Variance Mixtures (Including Student's t Distribution for Non-Integer Degrees of Freedom)
2018-10-14	Omisc	Univariate Bootstrapping and Other Things
2018-10-14	paran	Horn's Test of Principal Components/Factors
2018-10-14	pubchunks	Fetch Sections of XML Scholarly Articles
2018-10-14	RcppCCTZ	'Rcpp' Bindings for the 'CCTZ' Library
2018-10-14	rocsvm.path	The Entire Solution Paths for ROC-SVM
2018-10-14	SAVER	Single-Cell RNA-Seq Gene Expression Recovery
2018-10-14	scoper	Spectral Clustering-Based Method for Identifying B Cell Clones
2018-10-14	sjPlot	Data Visualization for Statistics in Social Science
2018-10-14	touch	Tools of Utilization and Cost in Healthcare
2018-10-14	trelliscopejs	Create Interactive Trelliscope Displays
2018-10-14	vimp	Nonparametric Variable Importance
2018-10-13	MetFns	Analysis of Visual Meteor Data
2018-10-13	MRPC	Mendelian Randomization (MR) Based PC Algorithm
2018-10-13	psychmeta	Psychometric Meta-Analysis Toolkit
2018-10-13	Rnightlights	Satellite Nightlight Data Extraction
2018-10-13	SCINA	A Semi-Supervised Category Identification and Assignment Tool
2018-10-13	testthat	Unit Testing for R
2018-10-13	treemapify	Draw Treemaps in 'ggplot2'
2018-10-13	xSub	Cross-National Data on Sub-National Violence
2018-10-12	bamlss	Bayesian Additive Models for Location Scale and Shape (and Beyond)
2018-10-12	bayesPop	Probabilistic Population Projection
2018-10-12	bayesTFR	Bayesian Fertility Projection
2018-10-12	binb	'binb' is not 'Beamer'
2018-10-12	BOIN	Bayesian Optimal INterval (BOIN) Design for Single-Agent and Drug- Combination Phase I Clinical Trials
2018-10-12	comperes	Manage Competition Results
2018-10-12	crqa	Cross-Recurrence Quantification Analysis for Categorical and Continuous Time-Series
2018-10-12	descstatsr	Descriptive Univariate Statistics
2018-10-12	egoTERGM	Estimation of Ego-Temporal Exponential Random Graph Models via Expectation Maximization (EM)
2018-10-12	ExPanDaR	Explore Panel Data Interactively
2018-10-12	HARModel	Heterogeneous Autoregressive Models
2018-10-12	ioanalysis	Input Output Analysis
2018-10-12	komaletter	Simple yet Flexible Letters via the 'KOMA-Script LaTeX Bundle'
2018-10-12	learnPopGen	Population Genetic Simulations & Numerical Analysis
2018-10-12	mase	Model-Assisted Survey Estimators
2018-10-12	mMPA	Implementation of Marker-Assisted Mini-Pooling with Algorithm
2018-10-12	mrfDepth	Depth Measures in Multivariate, Regression and Functional Settings
2018-10-12	nlts	Nonlinear Time Series Analysis
2018-10-12	pmpp	Posterior Mean Panel Predictor
2018-10-12	PxWebApiData	PX-Web Data by API
2018-10-12	RcppNLoptExample	'Rcpp' Package Illustrating Header-Only Access to 'NLopt'
2018-10-12	rococo	Robust Rank Correlation Coefficient and Test
2018-10-12	SQRL	Database Query Interfaces
2018-10-12	survey	Analysis of Complex Survey Samples
2018-10-12	TBFmultinomial	TBF Methodology Extension for Multinomial Outcomes
2018-10-12	trackeR	Infrastructure for Running, Cycling and Swimming Data from GPS-Enabled Tracking Devices
2018-10-12	varbin	Optimal Binning of Continuous and Categorical Variables
2018-10-12	VFS	Vegetated Filter Strip and Erosion Model
2018-10-11	antaresViz	Antares Visualizations
2018-10-11	bayesmeta	Bayesian Random-Effects Meta-Analysis
2018-10-11	docopt	Command-Line Interface Specification Language
2018-10-11	drfit	Dose-Response Data Evaluation
2018-10-11	EcoVirtual	Simulation of Ecological Models
2018-10-11	FisherEM	The FisherEM Algorithm to Simultaneously Cluster and Visualize High-Dimensional Data
2018-10-11	FLightR	A Package for Reconstructing Animal Paths from Solar Geolocation Loggers
2018-10-11	GetLattesData	Reading Bibliometric Data from Lattes Platform
2018-10-11	globals	Identify Global Objects in R Expressions
2018-10-11	GROAN	Genomic Regression Workbench
2018-10-11	ITNr	Analysis of the International Trade Network
2018-10-11	itunesr	Access iTunes App Store Ratings and Reviews using R
2018-10-11	ncf	Spatial Covariance Functions
2018-10-11	partialCI	Partial Cointegration
2018-10-11	polyCub	Cubature over Polygonal Domains
2018-10-11	RMCriteria	Multicriteria Package
2018-10-11	Rodam	Wrapper Functions for 'ODAM' (Open Data for Access and Mining) Web Services
2018-10-11	stacomiR	Fish Migration Monitoring
2018-10-11	sysfonts	Loading Fonts into R
2018-10-11	tidyselect	Select from a Set of Strings
2018-10-11	ttScreening	Genome-Wide DNA Methylation Sites Screening by Use of Training and Testing Samples
2018-10-11	VBLPCM	Variational Bayes Latent Position Cluster Model for Networks
2018-10-11	wevid	Quantifying Performance of a Binary Classifier Through Weight of Evidence
2018-10-10	airGR	Suite of GR Hydrological Models for Precipitation-Runoff Modelling
2018-10-10	ca	Simple, Multiple and Joint Correspondence Analysis
2018-10-10	clhs	Conditioned Latin Hypercube Sampling
2018-10-10	CutpointsOEHR	Optimal Equal-HR Method to Find Two Cutpoints for U-Shaped Relationships in Cox Model
2018-10-10	digest	Create Compact Hash Digests of R Objects
2018-10-10	emdi	Estimating and Mapping Disaggregated Indicators
2018-10-10	GetHFData	Download and Aggregate High Frequency Trading Data from Bovespa
2018-10-10	MTS	All-Purpose Toolkit for Analyzing Multivariate Time Series (MTS) and Estimating Multivariate Volatility Models
2018-10-10	NetworkChange	Bayesian Package for Network Changepoint Analysis
2018-10-10	rcheology	Data on Base Packages for Current and Previous Versions of R
2018-10-10	revealedPrefs	Revealed Preferences and Microeconomic Rationality
2018-10-10	rhierbaps	Clustering Genetic Sequence Data Using the HierBAPS Algorithm
2018-10-10	RSDA	R to Symbolic Data Analysis
2018-10-10	saemix	Stochastic Approximation Expectation Maximization (SAEM) Algorithm
2018-10-10	smcfcs	Multiple Imputation of Covariates by Substantive Model Compatible Fully Conditional Specification
2018-10-10	spotGUI	Graphical User Interface for the Package 'SPOT'
2018-10-10	uwIntroStats	Descriptive Statistics, Inference, Regression, and Plotting in an Introductory Statistics Course
2018-10-10	wooldridge	111 Data Sets from "Introductory Econometrics: A Modern Approach, 6e" by Jeffrey M. Wooldridge
2018-10-09	BayesGOF	Bayesian Modeling via Frequentist Goodness-of-Fit
2018-10-09	bayou	Bayesian Fitting of Ornstein-Uhlenbeck Models to Phylogenies
2018-10-09	Bolstad	Functions for Elementary Bayesian Inference
2018-10-09	cffdrs	Canadian Forest Fire Danger Rating System
2018-10-09	dglars	Differential Geometric Least Angle Regression
2018-10-09	EFAutilities	Utility Functions for Exploratory Factor Analysis
2018-10-09	evaluate	Parsing and Evaluation Tools that Provide More Details than the Default
2018-10-09	funData	An S4 Class for Functional Data
2018-10-09	intsvy	International Assessment Data Manager
2018-10-09	mindr	Convert Files Between Markdown or Rmarkdown Files and Mindmaps
2018-10-09	msigdbr	MSigDB Gene Sets for Multiple Organisms in a Tidy Data Format
2018-10-09	nucim	Nucleome Imaging Toolbox
2018-10-09	PAC	Partition-Assisted Clustering and Multiple Alignments of Networks
2018-10-09	RGoogleAnalytics	R Wrapper for the Google Analytics API
2018-10-09	rmgarch	Multivariate GARCH Models
2018-10-09	RndTexExams	Build and Grade Multiple Choice Exams with Randomized Content
2018-10-09	rticles	Article Formats for R Markdown
2018-10-09	StereoMorph	Stereo Camera Calibration and Reconstruction
2018-10-09	tsBSS	Blind Source Separation and Supervised Dimension Reduction for Time Series
2018-10-08	billboarder	Create Interactive Chart with the JavaScript 'Billboard' Library
2018-10-08	c212	Methods for Detecting Safety Signals in Clinical Trials Using Body-Systems (System Organ Classes)
2018-10-08	coda	Output Analysis and Diagnostics for MCMC
2018-10-08	COMBIA	Synergy/Antagonism Analyses of Drug Combinations
2018-10-08	comorbidity	Computing Comorbidity Scores
2018-10-08	CopyDetect	Computing Response Similarity Indices for Multiple-Choice Tests
2018-10-08	crossrun	Joint Distribution of Number of Crossings and Longest Run
2018-10-08	devRate	Quantify the Relationship Between Development Rate and Temperature in Ectotherms
2018-10-08	DiceKriging	Kriging Methods for Computer Experiments
2018-10-08	divDyn	Diversity Dynamics using Fossil Sampling Data
2018-10-08	easyreg	Easy Regression
2018-10-08	EpiStats	Tools for Epidemiologists
2018-10-08	epos	Epilepsy Ontology Similarities
2018-10-08	FourgameteP	FourGamete Test
2018-10-08	funHDDC	Univariate and Multivariate Model-Based Clustering in Group-Specific Functional Subspaces
2018-10-08	IntrinioStockAPI	Wrapper for the 'Intrinio Stock API'
2018-10-08	InvariantCausalPrediction	Invariant Causal Prediction
2018-10-08	jipApprox	Approximate Inclusion Probabilities for Survey Sampling
2018-10-08	lorentz	The Lorentz Transform in Relativistic Physics
2018-10-08	MCSim	Determine the Optimal Number of Clusters
2018-10-08	ndtv	Network Dynamic Temporal Visualizations
2018-10-08	nlgeocoder	Geocoding for the Netherlands
2018-10-08	pmml	Generate PMML for Various Models
2018-10-08	prais	Prais-Winsten Estimator for AR(1) Serial Correlation
2018-10-08	princurve	Fits a Principal Curve in Arbitrary Dimension
2018-10-08	processcheckR	Rule-Based Conformance Checking of Business Process Event Data
2018-10-08	psda	Polygonal Symbolic Data Analysis
2018-10-08	qle	Simulation-Based Quasi-Likelihood Estimation
2018-10-08	SMUT	Multi-SNP Mediation Intersection-Union Test
2018-10-08	sptemExp	Constrained Spatiotemporal Mixed Models for Exposure Estimation
2018-10-08	stationery	Working Examples for Reproducible Research Documents
2018-10-08	stylo	Stylometric Analyses
2018-10-08	TSEntropies	Time Series Entropies
2018-10-08	useful	A Collection of Handy, Useful Functions
2018-10-08	vamc	A Monte Carlo Valuation Framework for Variable Annuities
2018-10-08	weathercan	Download Weather Data from the Environment and Climate Change Canada Website
2018-10-07	colorfindr	Extract Colors from Windows BMP, JPEG, PNG, TIFF, and SVG Format Images
2018-10-07	coxrt	Cox Proportional Hazards Regression for Right Truncated Data
2018-10-07	diffeR	Metrics of Difference for Comparing Pairs of Maps or Pairs of Variables
2018-10-07	directotree	Creates an Interactive Tree Structure of a Directory
2018-10-07	DRIP	Discontinuous Regression and Image Processing
2018-10-07	hdf5r	Interface to the 'HDF5' Binary Data Format
2018-10-07	listviewer	'htmlwidget' for Interactive Views of R Lists
2018-10-07	lvm4net	Latent Variable Models for Networks
2018-10-07	NetLogoR	Build and Run Spatially Explicit Agent-Based Models
2018-10-07	pollen	Analysis of Aerobiological Data
2018-10-07	radiant	Business Analytics using R and Shiny
2018-10-07	ratelimitr	Rate Limiting for R
2018-10-07	rmapzen	Client for 'Mapzen' and Related Map APIs
2018-10-07	SamplingStrata	Optimal Stratification of Sampling Frames for Multipurpose Sampling Surveys
2018-10-07	SharpeR	Statistical Significance of the Sharpe Ratio
2018-10-07	simukde	Simulation with Kernel Density Estimation
2018-10-07	ssh	Secure Shell (SSH) Client for R
2018-10-07	StanHeaders	C++ Header Files for Stan
2018-10-07	summarytools	Tools to Quickly and Neatly Summarize Data
2018-10-07	Temporal	Parametric Time to Event Analysis
2018-10-07	UPSvarApprox	Approximate the Variance of the Horvitz-Thompson Total Estimator
2018-10-07	wallace	A Modular Platform for Reproducible Modeling of Species Niches and Distributions
2018-10-06	airportr	Convenience Tools for Working with Airport Data
2018-10-06	bazar	Miscellaneous Basic Functions
2018-10-06	coalitions	Coalition Probabilities in Multi-Party Democracies
2018-10-06	CoRpower	Power Calculations for Assessing Correlates of Risk in Clinical Efficacy Trials
2018-10-06	cvar	Compute Expected Shortfall and Value at Risk for Continuous Distributions
2018-10-06	eixport	Export Emissions to Atmospheric Models
2018-10-06	gamlss	Generalised Additive Models for Location Scale and Shape
2018-10-06	gamlss.data	GAMLSS Data
2018-10-06	googledrive	An Interface to Google Drive
2018-10-06	GUIDE	GUI for DErivatives in R
2018-10-06	installr	Using R to Install Stuff (Such As: R, 'Rtools', 'RStudio', 'Git', and More!)
2018-10-06	lamme	Log-Analytic Methods for Multiplicative Effects
2018-10-06	mcbiopi	Matrix Computation Based Identification of Prime Implicants
2018-10-06	Opt5PL	Optimal Designs for the 5-Parameter Logistic Model
2018-10-06	outcomerate	AAPOR Survey Outcome Rates
2018-10-06	pdSpecEst	An Analysis Toolbox for Hermitian Positive Definite Matrices
2018-10-06	piggyback	Managing Larger Data on a GitHub Repository
2018-10-06	PredictionR	Prediction for Future Data from any Continuous Distribution
2018-10-06	provenance	Statistical Toolbox for Sedimentary Provenance Analysis
2018-10-06	radiant.basics	Basics Menu for Radiant: Business Analytics using R and Shiny
2018-10-06	radiant.design	Design Menu for Radiant: Business Analytics using R and Shiny
2018-10-06	radiant.model	Model Menu for Radiant: Business Analytics using R and Shiny
2018-10-06	radiant.multivariate	Multivariate Menu for Radiant: Business Analytics using R and Shiny
2018-10-06	sdPrior	Scale-Dependent Hyperpriors in Structured Additive Distributional Regression
2018-10-06	spmoran	Moran's Eigenvector-Based Spatial Regression Models
2018-10-06	SSDforR	Functions to Analyze Single System Data
2018-10-06	stacomirtools	'ODBC' Connection Class for Package stacomiR
2018-10-06	tls	Tools of Total Least Squares in Error-in-Variables Models
2018-10-06	umx	Structural Equation and Twin Modeling in R
2018-10-05	blockcluster	Co-clustering Package for Binary, Categorical, Contingency and Continuous Data-Sets
2018-10-05	clusterlab	Flexible Gaussian Cluster Simulator
2018-10-05	CMatching	Matching Algorithms for Causal Inference with Clustered Data
2018-10-05	comtradr	Interface with the United Nations Comtrade API
2018-10-05	dma	Dynamic Model Averaging
2018-10-05	EcoNetGen	Simulate and Sample from Ecological Interaction Networks
2018-10-05	ERP	Significance Analysis of Event-Related Potentials Data
2018-10-05	fansi	ANSI Control Sequence Aware String Functions
2018-10-05	filelock	Portable File Locking
2018-10-05	fwsim	Fisher-Wright Population Simulation
2018-10-05	gbutils	Simulation of Real and Complex Numbers and Small Programming Utilities
2018-10-05	ggetho	Visualisation of High-Throughput Behavioural (i.e. Ethomics) Data
2018-10-05	Luminescence	Comprehensive Luminescence Dating Data Analysis
2018-10-05	magick	Advanced Graphics and Image-Processing in R
2018-10-05	MetaIntegrator	Meta-Analysis of Gene Expression Data
2018-10-05	mime	Map Filenames to MIME Types
2018-10-05	mixedsde	Estimation Methods for Stochastic Differential Mixed Effects Models
2018-10-05	NetworkDistance	Distance Measures for Networks
2018-10-05	OpenMx	Extended Structural Equation Modelling
2018-10-05	PWFSLSmoke	Utilities for Working with Air Quality Monitoring Data
2018-10-05	radiant.data	Data Menu for Radiant: Business Analytics using R and Shiny
2018-10-05	shinyTree	jsTree Bindings for Shiny
2018-10-05	simode	Statistical Inference for Systems of Ordinary Differential Equations using Separable Integral-Matching
2018-10-05	texmex	Statistical Modelling of Extreme Values
2018-10-05	uiucthemes	'R' 'Markdown' Themes for 'UIUC' Documents and Presentations
2018-10-04	bWGR	Bayesian Whole-Genome Regression
2018-10-04	Countr	Flexible Univariate Count Models Based on Renewal Processes
2018-10-04	Delta	Measure of Agreement Between Two Raters
2018-10-04	GGUM	Generalized Graded Unfolding Model
2018-10-04	littler	R at the Command-Line via 'r'
2018-10-04	MFPCA	Multivariate Functional Principal Component Analysis for Data Observed on Different Dimensional Domains
2018-10-04	oce	Analysis of Oceanographic Data
2018-10-04	partitionComparison	Implements Measures for the Comparison of Two Partitions
2018-10-04	PRIMsrc	PRIM Survival Regression Classification
2018-10-04	R6	Classes with Reference Semantics
2018-10-04	Rdpack	Update and Manipulate Rd Documentation Objects
2018-10-04	rise	Conduct RISE Analysis
2018-10-04	riskRegression	Risk Regression Models and Prediction Scores for Survival Analysis with Competing Risks
2018-10-04	rjmcmc	Reversible-Jump MCMC Using Post-Processing
2018-10-04	soundgen	Parametric Voice Synthesis
2018-10-04	spatstat.data	Datasets for 'spatstat'
2018-10-04	textreg	n-Gram Text Regression, aka Concise Comparative Summarization
2018-10-04	TileManager	Tile Manager
2018-10-03	ArArRedux	Rigorous Data Reduction and Error Propagation of Ar40 / Ar39 Data
2018-10-03	ClassDiscovery	Classes and Methods for "Class Discovery" with Microarrays or Proteomics
2018-10-03	dataMaid	A Suite of Checks for Identification of Potential Errors in a Data Frame as Part of the Data Screening Process
2018-10-03	eRm	Extended Rasch Modeling
2018-10-03	Gifi	Multivariate Analysis with Optimal Scaling
2018-10-03	iml	Interpretable Machine Learning
2018-10-03	jmdl	Joint Mean-Correlation Regression Approach for Discrete Longitudinal Data
2018-10-03	nloptr	R Interface to NLopt
2018-10-03	odr	Optimal Design and Statistical Power of Multilevel Randomized Trials
2018-10-03	PeakSegJoint	Joint Peak Detection in Several ChIP-Seq Samples
2018-10-03	PerFit	Person Fit
2018-10-03	picasso	Pathwise Calibrated Sparse Shooting Algorithm
2018-10-03	plotrix	Various Plotting Functions
2018-10-03	RcmdrPlugin.RiskDemo	R Commander Plug-in for Risk Demonstration
2018-10-03	readobj	Fast Reader for 'Wavefront' OBJ 3D Scene Files
2018-10-03	SpNMF	Supervised NMF
2018-10-03	vein	Vehicular Emissions Inventories
2018-10-03	VLMC	Variable Length Markov Chains ('VLMC') Models
2018-10-02	BASiNET	Classification of RNA Sequences using Complex Network Theory
2018-10-02	CalibrateSSB	Weighting and Estimation for Panel Data with Non-Response
2018-10-02	conflicted	An Alternative Conflict Resolution Strategy
2018-10-02	equateIRT	IRT Equating Methods
2018-10-02	IDPmisc	'Utilities of Institute of Data Analyses and Process Design (www.zhaw.ch/idp)'
2018-10-02	mlrCPO	Composable Preprocessing Operators and Pipelines for Machine Learning
2018-10-02	paleotree	Paleontological and Phylogenetic Analyses of Evolution
2018-10-02	rexpokit	R Wrappers for EXPOKIT; Other Matrix Functions
2018-10-02	rstudioapi	Safely Access the RStudio API
2018-10-02	samplingVarEst	Sampling Variance Estimation
2018-10-02	SensusR	Sensus Analytics
2018-10-02	shinyAce	Ace Editor Bindings for Shiny
2018-10-02	stability	Stability Analysis of Genotype by Environment Interaction (GEI)
2018-10-02	SwissAir	Air Quality Data of Switzerland for One Year in 30 Min Resolution
2018-10-02	tensorBF	Bayesian Tensor Factorization
2018-10-02	whitechapelR	Advanced Policing Techniques for the Board Game "Letters from Whitechapel"
2018-10-02	xxIRT	Item Response Theory and Computer-Based Testing in R
2018-10-01	coRanking	Co-Ranking Matrix
2018-10-01	EncDNA	Encoding of Nucleotide Sequences into Numeric Feature Vectors
2018-10-01	FactoClass	Combination of Factorial Methods and Cluster Analysis
2018-10-01	hrIPW	Hazard Ratio Estimation using Cox Model Weighted by the Estimated Propensity Score
2018-10-01	IMmailgun	Send Emails using 'Mailgun'
2018-10-01	landscapetools	Landscape Utility Toolbox
2018-10-01	LocalControlStrategy	Local Control Strategy for Robust Analysis of Cross-Sectional Data
2018-10-01	memisc	Management of Survey Data and Presentation of Analysis Results
2018-10-01	rcarbon	Calibration and Analysis of Radiocarbon Dates
2018-10-01	ROI.plugin.nloptr	'nloptr' Plug-in for the 'R' Optimization Infrastructure
2018-10-01	rtkore	'STK++' Core Library Integration to 'R' using 'Rcpp'
2018-10-01	SimRVPedigree	Simulate Pedigrees Ascertained for a Rare Disease
2018-10-01	SoyNAM	Soybean Nested Association Mapping Dataset
2018-10-01	webuse	Import Stata 'webuse' Datasets
2018-10-01	WeightedROC	Fast, Weighted ROC Curves
2018-09-30	av	Working with Audio and Video
2018-09-30	BRETIGEA	Brain Cell Type Specific Gene Expression Analysis
2018-09-30	cap	Covariate Assisted Principal (CAP) Regression for Covariance Matrix Outcomes
2018-09-30	carData	Companion to Applied Regression Data Sets
2018-09-30	codified	Produce Standard/Formalized Demographics Tables
2018-09-30	ctrlGene	Assess the Stability of Candidate Housekeeping Genes
2018-09-30	data.table	Extension of 'data.frame'
2018-09-30	DCEM	Clustering for Multivariate and Univariate Data Using Expectation Maximization Algorithm
2018-09-30	effectR	Predicts Oomycete Effectors
2018-09-30	fastGHQuad	Fast 'Rcpp' Implementation of Gauss-Hermite Quadrature
2018-09-30	ggparliament	Parliament Plots
2018-09-30	htmlwidgets	HTML Widgets for R
2018-09-30	lineqGPR	Gaussian Process Regression Models with Linear Inequality Constraints
2018-09-30	metaplot	Data-Driven Plot Design
2018-09-30	nanotime	Nanosecond-Resolution Time for R
2018-09-30	nonmemica	Create and Evaluate NONMEM Models in a Project Context
2018-09-30	optimx	Expanded Replacement and Extension of the 'optim' Function
2018-09-30	portsort	Factor-Based Portfolio Sorts
2018-09-30	RBitmoji	An R Wrapper to the Overly Complicated 'Bitmoji' API
2018-09-30	Rfolding	The Folding Test of Unimodality
2018-09-30	sazedR	Parameter-Free Domain-Agnostic Season Length Detection in Time Series
2018-09-30	sym.arma	Autoregressive and Moving Average Symmetric Models
2018-09-30	tdsc	Time Domain Signal Coding
2018-09-30	vip	Variable Importance Plots
2018-09-29	ClueR	Cluster Evaluation
2018-09-29	clustermq	Evaluate Function Calls on HPC Schedulers (LSF, SGE, SLURM, PBS/Torque)
2018-09-29	CORElearn	Classification, Regression and Feature Evaluation
2018-09-29	CSESA	CRISPR-Based Salmonella Enterica Serotype Analyzer
2018-09-29	dint	A Toolkit for Year-Quarter, Year-Month and Year-Isoweek Dates
2018-09-29	fDMA	Dynamic Model Averaging and Dynamic Model Selection for Continuous Outcomes
2018-09-29	GFD	Tests for General Factorial Designs
2018-09-29	LearnGeom	Learning Plane Geometry
2018-09-29	MazamaWebUtils	Utility Functions for Building Web Databrowsers
2018-09-29	mdir.logrank	Multiple-Direction Logrank Test
2018-09-29	multicastR	A Companion to the Multi-CAST Collection
2018-09-29	NAM	Nested Association Mapping
2018-09-29	RcppAPT	'Rcpp' Interface to the APT Package Manager
2018-09-29	rotl	Interface to the 'Open Tree of Life' API
2018-09-29	Rraven	Connecting R and 'Raven' Sound Analysis Software
2018-09-29	Ryacas	R Interface to the Yacas Computer Algebra System
2018-09-28	ADMM	Algorithms using Alternating Direction Method of Multipliers
2018-09-28	betareg	Beta Regression
2018-09-28	BETS	Brazilian Economic Time Series
2018-09-28	ddiv	Data Driven I-v Feature Extraction
2018-09-28	deflateBR	Deflate Nominal Brazilian Reais
2018-09-28	ecm	Build Error Correction Models
2018-09-28	ecoval	Procedures for Ecological Assessment of Surface Waters
2018-09-28	ggvis	Interactive Grammar of Graphics
2018-09-28	gifski	Highest Quality GIF Encoder
2018-09-28	HDcpDetect	Detect Change Points in Means of High Dimensional Data
2018-09-28	MaxPro	Maximum Projection Designs
2018-09-28	phytools	Phylogenetic Tools for Comparative Biology (and Other Things)
2018-09-28	pzfx	Read 'GraphPad Prism' Files
2018-09-28	quint	Qualitative Interaction Trees
2018-09-28	rgrass7	Interface Between GRASS 7 Geographical Information System and R
2018-09-28	roperators	Additional Operators to Help you Write Cleaner R Code
2018-09-28	rtweet	Collecting Twitter Data
2018-09-28	Rvcg	Manipulations of Triangular Meshes Based on the 'VCGLIB' API
2018-09-28	scalpel	Processes Calcium Imaging Data
2018-09-28	SCGLR	Supervised Component Generalized Linear Regression
2018-09-28	sigora	Signature Overrepresentation Analysis
2018-09-28	taxotools	Tools to Handle Taxonomic Lists
2018-09-28	textreadr	Read Text Documents into R
2018-09-28	titeIR	Isotonic Designs for Phase 1 Trials with Late-Onset Toxicities
2018-09-28	webshot	Take Screenshots of Web Pages
2018-09-27	adespatial	Multivariate Multiscale Spatial Analysis
2018-09-27	ahpsurvey	Analytic Hierarchy Process for Survey Data
2018-09-27	BNSP	Bayesian Non- And Semi-Parametric Model Fitting
2018-09-27	CARBayesST	Spatio-Temporal Generalised Linear Mixed Models for Areal Unit Data
2018-09-27	embryogrowth	Tools to Analyze the Thermal Reaction Norm of Embryo Growth
2018-09-27	EmissV	Vehicular Emissions by Top-Down Methods
2018-09-27	fluxweb	Estimate Energy Fluxes in Food Webs
2018-09-27	ggquickeda	Quickly Explore Your Data Using 'ggplot2' and Summary Tables
2018-09-27	ggridges	Ridgeline Plots in 'ggplot2'
2018-09-27	grpreg	Regularization Paths for Regression Models with Grouped Covariates
2018-09-27	hyfo	Hydrology and Climate Forecasting
2018-09-27	iptmnetr	Interface to the 'iPTMnet' API
2018-09-27	ipumsr	Read 'IPUMS' Extract Files
2018-09-27	mclogit	Mixed Conditional Logit Models
2018-09-27	meme	Create Meme
2018-09-27	Miso	Multi-Isotope Labeling for Metabolomics Analysis
2018-09-27	orcutt	Estimate Procedure in Case of First Order Autocorrelation
2018-09-27	osqp	Quadratic Programming Solver using the 'OSQP' Library
2018-09-27	phenology	Tools to Manage a Parametric Function that Describes Phenology
2018-09-27	R.matlab	Read and Write MAT Files and Call MATLAB from Within R
2018-09-27	rcube	Simulations and Visualizations of Rubik's Cube (with Mods)
2018-09-27	rebird	R Client for the eBird Database of Bird Observations
2018-09-27	rebmix	Finite Mixture Modeling, Clustering & Classification
2018-09-27	rsq	R-Squared and Related Measures
2018-09-27	simLife	Simulation of Fatigue Lifetimes
2018-09-27	sm	Smoothing Methods for Nonparametric Regression and Density Estimation
2018-09-27	taipan	Tool for Annotating Images in Preparation for Analysis
2018-09-27	tweenr	Interpolate Data for Smooth Animations
2018-09-27	utility	Construct, Evaluate and Plot Value and Utility Functions
2018-09-26	adjclust	Adjacency-Constrained Clustering of a Block-Diagonal Similarity Matrix
2018-09-26	bdvis	Biodiversity Data Visualizations
2018-09-26	CRM	Continual Reassessment Method (CRM) for Phase I Clinical Trials
2018-09-26	LncPath	Identifying the Pathways Regulated by LncRNA Sets of Interest
2018-09-26	MEPDF	Creation of Empirical Density Functions Based on Multivariate Data
2018-09-26	movMF	Mixtures of von Mises-Fisher Distributions
2018-09-26	neotoma	Access to the Neotoma Paleoecological Database Through R
2018-09-26	nonmem2R	Loading NONMEM Output Files and Simulate with Parameter Uncertainty
2018-09-26	PReMiuM	Dirichlet Process Bayesian Clustering, Profile Regression
2018-09-26	rcdk	Interface to the 'CDK' Libraries
2018-09-26	rdrobust	Robust Data-Driven Statistical Inference in Regression-Discontinuity Designs
2018-09-25	addhaz	Binomial and Multinomial Additive Hazard Models
2018-09-25	Bergm	Bayesian Exponential Random Graph Models
2018-09-25	bestNormalize	Normalizing Transformation Functions
2018-09-25	boxcoxmix	Box-Cox-Type Transformations for Linear and Logistic Models with Random Effects
2018-09-25	cli	Helpers for Developing Command Line Interfaces
2018-09-25	CPE	Concordance Probability Estimates in Survival Analysis
2018-09-25	dtwclust	Time Series Clustering Along with Optimizations for the Dynamic Time Warping Distance
2018-09-25	eba	Elimination-by-Aspects Models
2018-09-25	freegroup	The Free Group
2018-09-25	gWidgets2tcltk	Toolkit Implementation of gWidgets2 for tcltk
2018-09-25	h2o	R Interface for 'H2O'
2018-09-25	multicolor	Add Multiple Colors to your Console Output
2018-09-25	multigraph	Plot and Manipulate Multigraphs
2018-09-25	nestfs	Cross-Validated (Nested) Forward Selection
2018-09-25	nonnest2	Tests of Non-Nested Models
2018-09-25	RKEEL	Using KEEL in R Code
2018-09-25	RSuite	Supports Developing, Building and Deploying R Solution
2018-09-25	scam	Shape Constrained Additive Models
2018-09-25	seg	Measuring Spatial Segregation
2018-09-25	seplyr	Improved Standard Evaluation Interfaces for Common Data Manipulation Tasks
2018-09-24	afex	Analysis of Factorial Experiments
2018-09-24	ape	Analyses of Phylogenetics and Evolution
2018-09-24	aqp	Algorithms for Quantitative Pedology
2018-09-24	BAwiR	Analysis of Basketball Data
2018-09-24	behaviorchange	Tools for Behavior Change Researchers and Professionals
2018-09-24	bigdatadist	Distances for Machine Learning and Statistics in the Context of Big Data
2018-09-24	checkLuhn	Checks if a Number is Valid Using the Luhn Algorithm
2018-09-24	Ckmeans.1d.dp	Optimal and Fast Univariate Clustering
2018-09-24	clpAPI	R Interface to C API of COIN-OR Clp
2018-09-24	data.tree	General Purpose Hierarchical Data Structure
2018-09-24	distdichoR	Distributional Method for the Dichotomisation of Continuous Outcomes
2018-09-24	doParallel	Foreach Parallel Adaptor for the 'parallel' Package
2018-09-24	dynr	Dynamic Modeling in R
2018-09-24	EcoHydRology	A Community Modeling Foundation for Eco-Hydrology
2018-09-24	flexclust	Flexible Cluster Algorithms
2018-09-24	frequencyConnectedness	Spectral Decomposition of Connectedness Measures
2018-09-24	Infusion	Inference Using Simulation
2018-09-24	ITRSelect	Variable Selection for Optimal Individualized Dynamic Treatment Regime
2018-09-24	parallelDist	Parallel Distance Matrix Computation using Multiple Threads
2018-09-24	PBRF	The Probability of Being in Response Function and Its Variance Estimates
2018-09-24	pROC	Display and Analyze ROC Curves
2018-09-24	revengc	Reverse Engineering Summarized Data
2018-09-24	semTools	Useful Tools for Structural Equation Modeling
2018-09-24	smapr	Acquisition and Processing of NASA Soil Moisture Active-Passive (SMAP) Data
2018-09-24	splinetree	Longitudinal Regression Trees and Forests
2018-09-24	thriftr	Apache Thrift Client Server
2018-09-24	userfriendlyscience	Quantitative Analysis Made Accessible
2018-09-24	WeMix	Weighted Mixed-Effects Models, using Multilevel Pseudo Maximum Likelihood Estimation
2018-09-23	Cyclops	Cyclic Coordinate Descent for Logistic, Poisson and Survival Analysis
2018-09-23	DescribeDisplay	An Interface to the 'DescribeDisplay' 'GGobi' Plugin
2018-09-23	geex	An API for M-Estimation
2018-09-23	geojsonR	A GeoJson Processing Toolkit
2018-09-23	jtools	Analysis and Presentation of Social Scientific Data
2018-09-23	mFilter	Miscellaneous Time Series Filters
2018-09-23	NHMSAR	Non-Homogeneous Markov Switching Autoregressive Models
2018-09-23	nlmixr	Nonlinear Mixed Effects Models in Population Pharmacokinetics and Pharmacodynamics
2018-09-23	nonlinearTseries	Nonlinear Time Series Analysis
2018-09-23	nullabor	Tools for Graphical Inference
2018-09-23	RGF	Regularized Greedy Forest
2018-09-23	SI	Stochastic Integrating
2018-09-22	ether	Interaction with the 'Ethereum' Blockchain
2018-09-22	expm	Matrix Exponential, Log, 'etc'
2018-09-22	gjam	Generalized Joint Attribute Modeling
2018-09-22	gmvarkit	Estimate Gaussian Mixture Vector Autoregressive Model
2018-09-22	lavaan	Latent Variable Analysis
2018-09-22	MortCast	Estimation and Projection of Age-Specific Mortality Rates
2018-09-22	pavo	Perceptual Analysis, Visualization and Organization of Spectral Color Data in R
2018-09-22	rapidjsonr	'Rapidjson' C++ Header Files
2018-09-22	RMOA	Connect R with MOA for Massive Online Analysis
2018-09-22	RMOAjars	External jars Required for Package RMOA
2018-09-22	sparsepp	'Rcpp' Interface to 'sparsepp'
2018-09-22	uGMAR	Estimate Univariate Gaussian or Student's t Mixture Autoregressive Model
2018-09-21	anomaly	Detecting Anomalies in Data
2018-09-21	APtools	Average Positive Predictive Values (AP) for Binary Outcomes and Censored Event Times
2018-09-21	autocogs	Automatic Cognostic Summaries
2018-09-21	blin	Bipartite Longitudinal Influence Network (BLIN) Estimation
2018-09-21	blockingChallenge	Create Blocks or Strata which are Similar Within
2018-09-21	BootstrapQTL	Bootstrap cis-QTL Method that Corrects for the Winner's Curse
2018-09-21	gbfs	Interface with General Bikeshare Feed Specification Files
2018-09-21	HEMDAG	Hierarchical Ensemble Methods for Directed Acyclic Graphs
2018-09-21	inctools	Incidence Estimation Tools
2018-09-21	multiplex	Algebraic Tools for the Analysis of Multiple Social Networks
2018-09-21	RInno	An Installation Framework for Shiny Apps
2018-09-21	robustbase	Basic Robust Statistics
2018-09-21	rsdmx	Tools for Reading SDMX Data and Metadata
2018-09-21	RTransferEntropy	Measuring Information Flow Between Time Series with Shannon and Renyi Transfer Entropy
2018-09-21	trigpoints	Data Set of Trig Points in Great Britain in British National Grid Coordinates
2018-09-21	zeroEQpart	Zero Order vs (Semi) Partial Correlation Test and CI
2018-09-20	adpss	Design and Analysis of Locally or Globally Efficient Adaptive Designs
2018-09-20	bs4Dash	A 'Bootstrap 4' Version of 'shinydashboard'
2018-09-20	crypto	Cryptocurrency Market Data
2018-09-20	datasauRus	Datasets from the Datasaurus Dozen
2018-09-20	DensParcorr	Dens-Based Method for Partial Correlation Estimation in Large Scale Brain Networks
2018-09-20	DIconvex	Finding Patterns of Monotonicity and Convexity in Data
2018-09-20	dispRity	Measuring Disparity in R
2018-09-20	generalhoslem	Goodness of Fit Tests for Logistic Regression Models
2018-09-20	ggpol	Visualizing Social Science Data with 'ggplot2'
2018-09-20	lmomco	L-Moments, Censored L-Moments, Trimmed L-Moments, L-Comoments, and Many Distributions
2018-09-20	LPKsample	LP Nonparametric High Dimensional K-Sample Comparison
2018-09-20	phuse	Web Application Framework for 'PhUSE' Scripts
2018-09-20	quantregGrowth	Growth Charts via Regression Quantiles
2018-09-20	rcoreoa	Client for the CORE API
2018-09-20	robustrank	Robust Rank-Based Tests
2018-09-20	ROptSpace	Matrix Reconstruction from a Few Entries
2018-09-20	rqdatatable	'rquery' for 'data.table'
2018-09-20	rsnps	Get 'SNP' ('Single-Nucleotide' 'Polymorphism') Data on the Web
2018-09-20	shazam	Immunoglobulin Somatic Hypermutation Analysis
2018-09-20	shinydashboardPlus	Add some 'AdminLTE2' Components to 'shinydashboard'
2018-09-20	soiltexture	Functions for Soil Texture Plot, Classification and Transformation
2018-09-20	TTR	Technical Trading Rules
2018-09-20	unfoldr	Stereological Unfolding for Spheroidal Particles
2018-09-20	vardpoor	Variance Estimation for Sample Surveys by the Ultimate Cluster Method
2018-09-19	auditor	Model Audit - Verification, Validation, and Error Analysis
2018-09-19	BayLum	Chronological Bayesian Models Integrating Optically Stimulated Luminescence and Radiocarbon Age Dating
2018-09-19	bcf	Causal Inference for a Binary Treatment and Continuous Outcome using Bayesian Causal Forests
2018-09-19	cglasso	L1-Penalized Censored Gaussian Graphical Models
2018-09-19	CIAAWconsensus	Isotope Ratio Meta-Analysis
2018-09-19	dataCompareR	Compare Two Data Frames and Summarise the Difference
2018-09-19	droptest	Simulates LOX Drop Testing
2018-09-19	EffectTreat	Prediction of Therapeutic Success
2018-09-19	iNEXT	Interpolation and Extrapolation for Species Diversity
2018-09-19	IRISSeismic	Classes and Methods for Seismic Data Analysis
2018-09-19	KFAS	Kalman Filter and Smoother for Exponential Family State Space Models
2018-09-19	maptools	Tools for Handling Spatial Objects
2018-09-19	PAFit	Generative Mechanism Estimation in Temporal Complex Networks
2018-09-19	pssmooth	Flexible and Efficient Evaluation of Principal Surrogates/Treatment Effect Modifiers
2018-09-19	replyr	Patches to Use 'dplyr' on Remote Data Sources
2018-09-19	SplitSoftening	Softening Splits in Decision Trees
2018-09-19	wilson	Web-Based Interactive Omics Visualization
2018-09-19	zoo	S3 Infrastructure for Regular and Irregular Time Series (Z's Ordered Observations)
2018-09-18	asbio	A Collection of Statistical Tools for Biologists
2018-09-18	cartography	Thematic Cartography
2018-09-18	ccfa	Continuous Counterfactual Analysis
2018-09-18	cowsay	Messages, Warnings, Strings with Ascii Animals
2018-09-18	cymruservices	Query 'Team Cymru' 'IP' Address, Autonomous System Number ('ASN'), Border Gateway Protocol ('BGP'), Bogon and 'Malware' Hash Data Services
2018-09-18	docxtractr	Extract Data Tables and Comments from 'Microsoft' 'Word' Documents
2018-09-18	eivtools	Measurement Error Modeling Tools
2018-09-18	EValue	Sensitivity Analyses for Unmeasured Confounding in Observational Studies and Meta-Analyses
2018-09-18	GAS	Generalized Autoregressive Score Models
2018-09-18	hetGP	Heteroskedastic Gaussian Process Modeling and Design under Replication
2018-09-18	later	Utilities for Delaying Function Execution
2018-09-18	lifecontingencies	Financial and Actuarial Mathematics for Life Contingencies
2018-09-18	MazamaSpatialUtils	Spatial Data Download and Utility Functions
2018-09-18	mhurdle	Multiple Hurdle Tobit Models
2018-09-18	molaR	Dental Surface Complexity Measurement Tools
2018-09-18	ndjson	Wicked-Fast Streaming 'JSON' ('ndjson') Reader
2018-09-18	netrankr	Analyzing Partial Rankings in Networks
2018-09-18	packcircles	Circle Packing
2018-09-18	polmineR	Toolkit for Corpus Analysis
2018-09-18	ReIns	Functions from "Reinsurance: Actuarial and Statistical Aspects"
2018-09-18	rmetalog	R Implementation of the Metalog Distribution
2018-09-18	RSelenium	R Bindings for 'Selenium WebDriver'
2018-09-18	rzmq	R Bindings for 'ZeroMQ'
2018-09-18	shiny.router	Basic Routing for Shiny Web Applications
2018-09-18	sunburstR	'Htmlwidget' for 'Kerry Rodden' 'd3.js' Sequence and 'd2b' Sunburst
2018-09-18	tram	Transformation Models
2018-09-18	trtf	Transformation Trees and Forests
2018-09-18	VineCopula	Statistical Inference of Vine Copulas
2018-09-17	bamdit	Bayesian Meta-Analysis of Diagnostic Test Data
2018-09-17	basefun	Infrastructure for Computing with Basis Functions
2018-09-17	CA3variants	Three-Way Correspondence Analysis Variants
2018-09-17	CorDiff	Set-Based Differential Covariance Testing for Genomics
2018-09-17	EloOptimized	Optimized Elo Rating Method for Obtaining Dominance Ranks
2018-09-17	emhawkes	Exponential Multivariate Hawkes Model
2018-09-17	gdns	Tools to Work with Google's 'DNS-over-HTTPS' ('DoH') 'API'
2018-09-17	googleway	Accesses Google Maps APIs to Retrieve Data and Plot Maps
2018-09-17	HMMextra0s	Hidden Markov Models with Extra Zeros
2018-09-17	kergp	Gaussian Process Laboratory
2018-09-17	magic	Create and Investigate Magic Squares
2018-09-17	mbir	Magnitude-Based Inferences
2018-09-17	MSPRT	Modified Sequential Probability Ratio Test (MSPRT)
2018-09-17	n1qn1	Port of the 'Scilab' 'n1qn1' and 'qnbd' Modules for (Un)constrained BFGS Optimization
2018-09-17	PythonInR	Use 'Python' from Within 'R'
2018-09-17	rlmDataDriven	Robust Regression with Data Driven Tuning Parameter
2018-09-17	sabre	Spatial Association Between Regionalizations
2018-09-17	salty	Turn Clean Data into Messy Data
2018-09-17	spikeSlabGAM	Bayesian Variable Selection and Model Choice for Generalized Additive Mixed Models
2018-09-17	stuart	Subtests Using Algorithmic Rummaging Techniques
2018-09-17	treeman	Phylogenetic Tree Manipulation Class and Methods
2018-09-17	UKgrid	The UK National Electricity Transmission System Dataset
2018-09-17	variables	Variable Descriptions
2018-09-17	xmlparsedata	Parse Data of 'R' Code as an 'XML' Tree
2018-09-17	xopen	Open System Files, 'URLs', Anything
2018-09-16	aiRthermo	Atmospheric Thermodynamics and Visualization
2018-09-16	caMST	Mixed Computerized Adaptive Multistage Testing
2018-09-16	DHS.rates	Calculate Key DHS Indicators
2018-09-16	duawranglr	Securely Wrangle Dataset According to Data Usage Agreement
2018-09-16	fieldRS	Remote Sensing Field Work Tools
2018-09-16	filling	Matrix Completion, Imputation, and Inpainting Methods
2018-09-16	gbm	Generalized Boosted Regression Models
2018-09-16	graphon	A Collection of Graphon Estimation Methods
2018-09-16	hIRT	Hierarchical Item Response Theory Models
2018-09-16	knockoff	The Knockoff Filter for Controlled Variable Selection
2018-09-16	mapview	Interactive Viewing of Spatial Data in R
2018-09-16	MPN	Most Probable Number for Serial Dilutions
2018-09-16	nnTensor	Non-Negative Tensor Decomposition
2018-09-16	NTsets	Normality Test Sets Integrated Function and Figure Methods for Continuous Variables
2018-09-16	recmap	Compute the Rectangular Statistical Cartogram
2018-09-16	reprex	Prepare Reproducible Example Code via the Clipboard
2018-09-16	rgeopat2	Additional Functions for 'GeoPAT' 2
2018-09-16	roundhouse	An R Wrapper to the 'ICNDb' API
2018-09-16	simstudy	Simulation of Study Data
2018-09-16	sparr	Spatial and Spatiotemporal Relative Risk
2018-09-16	stylest	Estimating Speaker Style Distinctiveness
2018-09-16	tvR	Total Variation Regularization
2018-09-16	usmap	US Maps Including Alaska and Hawaii
2018-09-16	VBTree	Vector Binary Tree to Make Your Data Management More Efficient
2018-09-16	voteogram	United States House and Senate Voting Cartogram Generators
2018-09-15	BLPestimatoR	Performs a BLP Demand Estimation
2018-09-15	chebpol	Multivariate Interpolation
2018-09-15	dcemriS4	A Package for Image Analysis of DCE-MRI (S4 Implementation)
2018-09-15	FFTrees	Generate, Visualise, and Evaluate Fast-and-Frugal Decision Trees
2018-09-15	fitODBOD	Modeling Over Dispersed Binomial Outcome Data Using BMD and ABD
2018-09-15	JWileymisc	Miscellaneous Utilities and Functions
2018-09-15	PropClust	Propensity Clustering and Decomposition
2018-09-15	RcmdrPlugin.BiclustGUI	'Rcmdr' Plug-in GUI for Biclustering
2018-09-15	rdnb	R Interface to the 'Deutsche Nationalbibliothek (German National Library) API'
2018-09-15	rtsplot	Time Series Plot
2018-09-14	alakazam	Immunoglobulin Clonal Lineage and Diversity Analysis
2018-09-14	asht	Applied Statistical Hypothesis Tests
2018-09-14	BMA	Bayesian Model Averaging
2018-09-14	CovTools	Statistical Tools for Covariance Analysis
2018-09-14	crawl	Fit Continuous-Time Correlated Random Walk Models to Animal Movement Data
2018-09-14	cruts	Interface to Climatic Research Unit Time-Series Version 3.21 Data
2018-09-14	demogR	Analysis of Age-Structured Demographic Models
2018-09-14	episcan	Scan Pairwise Epistasis
2018-09-14	fingertipscharts	Produce Charts that you See on the Fingertips Website
2018-09-14	fts	R Interface to 'tslib' (a Time Series Library in C++)
2018-09-14	glpkAPI	R Interface to C API of GLPK
2018-09-14	kitagawa	Spectral Response of Water Wells to Harmonic Strain and Pressure Signals
2018-09-14	LabourMarketAreas	Identification, Tuning, Visualisation and Analysis of Labour Market Areas
2018-09-14	longmemo	Statistics for Long-Memory Processes (Book Jan Beran), and Related Functionality
2018-09-14	mcca	Multi-Category Classification Accuracy
2018-09-14	MCMCpack	Markov Chain Monte Carlo (MCMC) Package
2018-09-14	mize	Unconstrained Numerical Optimization Algorithms
2018-09-14	mkin	Kinetic Evaluation of Chemical Degradation Data
2018-09-14	MmgraphR	Graphing for Markov, Hidden Markov, and Mixture Transition Distribution Models
2018-09-14	monomvn	Estimation for Multivariate Normal and Student-t Data with Monotone Missingness
2018-09-14	mstrio	Interface for 'MicroStrategy' REST API
2018-09-14	pimeta	Prediction Intervals for Random-Effects Meta-Analysis
2018-09-14	poolfstat	Computing F-Statistics from Pool-Seq Data
2018-09-14	RcppAlgos	High Performance Tools for Combinatorics and Computational Mathematics
2018-09-14	reglogit	Simulation-Based Regularized Logistic Regression
2018-09-14	RNOmni	Omnibus Test for Genetic Association Analysis using the Rank Normal Transformation
2018-09-14	RtutoR	Shiny Apps for Plotting and Exploratory Analysis
2018-09-14	rym	R Interface to Yandex Metrika API
2018-09-14	sgmcmc	Stochastic Gradient Markov Chain Monte Carlo
2018-09-14	snow	Simple Network of Workstations
2018-09-13	AdvDif4	Solving 1D Advection Bi-Flux Diffusion Equation
2018-09-13	atable	Create Tables for Reporting Clinical Trials
2018-09-13	Blaunet	Calculate and Analyze Blau Status for (Covert) Organizations
2018-09-13	CKLRT	Composite Kernel Machine Regression Based on Likelihood Ratio Test
2018-09-13	condvis	Conditional Visualization for Statistical Models
2018-09-13	covafillr	Local Polynomial Regression of State Dependent Covariates in State-Space Models
2018-09-13	cRegulome	Obtain and Visualize Regulome-Gene Expression Correlations in Cancer
2018-09-13	EnvCpt	Detection of Structural Changes in Climate and Environment Time Series
2018-09-13	EstMix	Tumor Clones Percentage Estimations
2018-09-13	explor	Interactive Interfaces for Results Exploration
2018-09-13	HDtest	High Dimensional Hypothesis Testing for Mean Vectors, Covariance Matrices, and White Noise of Vector Time Series
2018-09-13	knor	Non-Uniform Memory Access ('NUMA') Optimized, Parallel K-Means
2018-09-13	MicSim	Performing Continuous-Time Microsimulation
2018-09-13	multivariance	Measuring Multivariate Dependence Using Distance Multivariance
2018-09-13	ncvreg	Regularization Paths for SCAD and MCP Penalized Regression Models
2018-09-13	nse	Numerical Standard Errors Computation in R
2018-09-13	openVA	Automated Method for Verbal Autopsy
2018-09-13	PHeval	Evaluation of the Proportional Hazards Assumption with a Standardized Score Process
2018-09-13	psycho	Efficient and Publishing-Oriented Workflow for Psychological Science
2018-09-13	qrjoint	Joint Estimation in Linear Quantile Regression
2018-09-13	shiny.i18n	Shiny Applications Internationalization
2018-09-13	SimPhe	Tools to Simulate Phenotype(s) with Epistatic Interaction
2018-09-13	tosca	Tools for Statistical Content Analysis
2018-09-13	tricolore	A Flexible Color Scale for Ternary Compositions
2018-09-13	VarfromPDB	Disease-Gene-Variant Relations Mining from the Public Databases and Literature
2018-09-12	amt	Animal Movement Tools
2018-09-12	bigstep	Stepwise Selection for Large Data Sets
2018-09-12	bomrang	Australian Government Bureau of Meteorology (BOM) Data from R
2018-09-12	CAvariants	Correspondence Analysis Variants
2018-09-12	crunch	Crunch.io Data Tools
2018-09-12	CTT	Classical Test Theory Functions
2018-09-12	DiscreteFDR	Multiple Testing Procedures with Adaptation for Discrete Tests
2018-09-12	dlnm	Distributed Lag Non-Linear Models
2018-09-12	exiftoolr	ExifTool Functionality from R
2018-09-12	flipscores	Robust Testing in GLMs
2018-09-12	geosapi	GeoServer REST API R Interface
2018-09-12	getCRUCLdata	Use and Explore CRU CL v. 2.0 Climatology Elements in R
2018-09-12	ggmosaic	Mosaic Plots in the 'ggplot2' Framework
2018-09-12	grec	GRadient-Based RECognition of Spatial Patterns in Environmental Data
2018-09-12	jagsUI	A Wrapper Around 'rjags' to Streamline 'JAGS' Analyses
2018-09-12	kstMatrix	Basic Functions in Knowledge Space Theory Using Matrix Representation
2018-09-12	lmQCM	An Algorithm for Gene Co-Expression Analysis
2018-09-12	mccmeiv	Estimating Parameters for a Matched Case Control Design with a Mismeasured Exposure using Instrumental Variables
2018-09-12	odpc	One-Sided Dynamic Principal Components
2018-09-12	qualmap	Opinionated Approach for Digitizing Semi-Structured Qualitative GIS Data
2018-09-12	rbtc	Bitcoin API
2018-09-12	rollRegres	Fast Rolling and Expanding Window Linear Regression
2018-09-12	rwavelet	Wavelet Analysis
2018-09-12	SAFD	Statistical Analysis of Fuzzy Data
2018-09-12	TempleMetrics	Estimating Conditional Distributions
2018-09-11	DLMtool	Data-Limited Methods Toolkit
2018-09-11	echor	Access EPA 'ECHO' Data
2018-09-11	fastnet	Large-Scale Social Network Analysis
2018-09-11	ggcorrplot	Visualization of a Correlation Matrix using 'ggplot2'
2018-09-11	hBayesDM	Hierarchical Bayesian Modeling of Decision-Making Tasks
2018-09-11	HMMEsolver	A Fast Solver for Henderson Mixed Model Equation via Row Operations
2018-09-11	Hotelling	Hotelling's T^2 Test and Variants
2018-09-11	IncDTW	Incremental Calculation of Dynamic Time Warping
2018-09-11	jubilee	Forecasting Long-Term Growth of the U.S. Stock Market
2018-09-11	kofdata	Get Data from the 'KOF Datenservice' API
2018-09-11	KrigInv	Kriging-Based Inversion for Deterministic and Noisy Computer Experiments
2018-09-11	kstIO	Knowledge Space Theory Input/Output
2018-09-11	LMest	Latent Markov Models with and without Covariates
2018-09-11	longpower	Sample Size Calculations for Longitudinal Data
2018-09-11	ModelMap	Modeling and Map Production using Random Forest and Related Stochastic Models
2018-09-11	move	Visualizing and Analyzing Animal Track Data
2018-09-11	papeR	A Toolbox for Writing Pretty Papers and Reports
2018-09-11	phateR	PHATE - Potential of Heat-Diffusion for Affinity-Based Transition Embedding
2018-09-11	PhylogeneticEM	Automatic Shift Detection using a Phylogenetic EM
2018-09-11	plsRcox	Partial Least Squares Regression for Cox Models and Related Techniques
2018-09-11	prettycode	Pretty Print R Code in the Terminal
2018-09-11	rayshader	Create and Visualize Hillshaded Maps from Elevation Matrices
2018-09-11	Rcmdr	R Commander
2018-09-11	Rnets	Resistance Relationship Networks using Graphical LASSO
2018-09-11	Rnmr1D	Perform the Complete Processing of a Set of Proton Nuclear Magnetic Resonance Spectra
2018-09-11	RobustGaSP	Robust Gaussian Stochastic Process Emulation
2018-09-11	scorecard	Credit Risk Scorecard
2018-09-11	sensiPhy	Sensitivity Analysis for Comparative Methods
2018-09-11	sport	Sequential Pairwise Online Rating Techniques
2018-09-11	steemr	A Tool for Processing Steem Data
2018-09-11	tstools	A Time Series Toolbox for Official Statistics
2018-09-11	whoami	Username, Full Name, Email Address, 'GitHub' Username of the Current User
2018-09-11	yacca	Yet Another Canonical Correlation Analysis Package
2018-09-11	zoocat	'zoo' Objects with Column Attributes
2018-09-10	AsioHeaders	'Asio' C++ Header Files
2018-09-10	BalancedSampling	Balanced and Spatially Balanced Sampling
2018-09-10	BHTSpack	Bayesian Multi-Plate High-Throughput Screening of Compounds
2018-09-10	CDECRetrieve	Retrieve Historical and Near Realtime Data from CDEC
2018-09-10	checkpoint	Install Packages from Snapshots on the Checkpoint Server for Reproducibility
2018-09-10	clue	Cluster Ensembles
2018-09-10	clustMixType	k-Prototypes Clustering for Mixed Variable-Type Data
2018-09-10	ctmm	Continuous-Time Movement Modeling
2018-09-10	datasets.load	Interface for Loading Datasets
2018-09-10	DtD	Distance to Default
2018-09-10	fitdistrplus	Help to Fit of a Parametric Distribution to Non-Censored or Censored Data
2018-09-10	ghibli	Studio Ghibli Palette Generator
2018-09-10	itsmr	Time Series Analysis Using the Innovations Algorithm
2018-09-10	kidney.epi	Kidney Functions: Clinical and Epidemiological
2018-09-10	languageserver	Language Server Protocol
2018-09-10	LexisNexisTools	Working with Files from 'LexisNexis'
2018-09-10	MEGENA	Multiscale Clustering of Geometrical Network
2018-09-10	metRology	Support for Metrological Applications
2018-09-10	MVR	Mean-Variance Regularization
2018-09-10	ndl	Naive Discriminative Learning
2018-09-10	nesRdata	National Eutrophication Survey Data
2018-09-10	NlinTS	Non Linear Time Series Analysis
2018-09-10	optimStrat	Choosing the Sample Strategy
2018-09-10	ordinalNet	Penalized Ordinal Regression
2018-09-10	penaltyLearning	Penalty Learning
2018-09-10	PopED	Population (and Individual) Optimal Experimental Design
2018-09-10	RcmdrMisc	R Commander Miscellaneous Functions
2018-09-10	rly	'Lex' and 'Yacc'
2018-09-10	RWeka	R/Weka Interface
2018-09-10	RWekajars	R/Weka Interface Jars
2018-09-10	SamplerCompare	A Framework for Comparing the Performance of MCMC Samplers
2018-09-10	season	Seasonal Analysis of Health Data
2018-09-10	sindyr	Sparse Identification of Nonlinear Dynamics
2018-09-10	sklarsomega	Measuring Agreement Using Sklar's Omega Coefficient
2018-09-10	smicd	Statistical Methods for Interval Censored Data
2018-09-10	spagmix	Artificial Spatial and Spatiotemporal Densities on Bounded Windows
2018-09-10	virtualspecies	Generation of Virtual Species Distributions
2018-09-09	chron	Chronological Objects which can Handle Dates and Times
2018-09-09	downscale	Downscaling Species Occupancy
2018-09-09	gstat	Spatial and Spatio-Temporal Geostatistical Modelling, Prediction and Simulation
2018-09-09	MetSizeR	GUI Tool for Estimating Sample Sizes for Metabolomic Experiments
2018-09-09	rWishart	Random Wishart Matrix Generation
2018-09-05	vanquish	Variant Quality Investigation Helper
2018-09-03	cmrutils	Misc Functions of the Center for Mathematical Research
2018-09-03	CTTinShiny	Shiny Interface for the CTT Package
2018-09-03	datadigest	Create an Interactive Data Summary
2018-09-03	ELMSO	Implementation of the Efficient Large-Scale Online Display Advertising Algorithm
2018-09-03	ggTimeSeries	Time Series Visualisations Using the Grammar of Graphics
2018-09-03	harrypotter	Palettes Generated from All "Harry Potter" Movies
2018-09-03	itemanalysis	Classical Test Theory Item Analysis
2018-09-03	medflex	Flexible Mediation Analysis Using Natural Effect Models
2018-09-03	newsmap	Semi-Supervised Model for Geographical Document Classification
2018-09-03	pysd2r	API to 'Python' Library 'pysd'
2018-09-03	redR	REgularization by Denoising (RED)
2018-09-03	rgoogleslides	R Interface to Google Slides
2018-09-03	ROP	Regression Optimized: Numerical Approach for Multivariate Classification and Regression Trees
2018-09-03	SamplingBigData	Sampling Methods for Big Data
2018-09-03	spm12r	Wrapper Functions for 'SPM' (Statistical Parametric Mapping) Version 12 from the 'Wellcome' Trust Centre for 'Neuroimaging'
2018-09-03	survivalAnalysis	High-Level Interface for Survival Analysis and Associated Plots
2018-09-03	tbrf	Time-Based Rolling Functions
2018-09-03	tiobeindexr	Extract 'TIOBE' Programming Index Tables for the Latest Month
2018-09-03	trinROC	Statistical Tests for Assessing Trinormal ROC Data
2018-09-02	data360r	Wrapper for TC/Govdata360 API
2018-09-02	DepthProc	Statistical Depth Functions for Multivariate Analysis
2018-09-02	pulsar	Parallel Utilities for Lambda Selection along a Regularization Path
2018-09-02	reportROC	An Easy Way to Report ROC Analysis
2018-09-02	rsm	Response-Surface Analysis
2018-09-02	sensitivity	Global Sensitivity Analysis of Model Outputs
2018-09-01	fitur	Fit Univariate Distributions
2018-09-01	ggdmc	Cognitive Models
2018-09-01	healthcareai	Tools for Healthcare Machine Learning
2018-08-31	ade4	Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences
2018-08-31	adegraphics	An S4 Lattice-Based Package for the Representation of Multivariate Data
2018-08-31	bcaboot	Bias Corrected Bootstrap Confidence Intervals
2018-08-31	bdDwC	Darwinizer: Darwin Core (DwC) Field Names Standardization
2018-08-31	bdribs	Bayesian Detection of Potential Risk Using Inference on Blinded Safety Data
2018-08-31	bnstruct	Bayesian Network Structure Learning from Data with Missing Values
2018-08-31	CARBayesdata	Data Used in the Vignettes Accompanying the CARBayes and CARBayesST Packages
2018-08-31	corpora	Statistics and Data Sets for Corpus Frequency Data
2018-08-31	cutpointr	Determine and Evaluate Optimal Cutpoints in Binary Classification Tasks
2018-08-31	DOS	Design of Observational Studies
2018-08-31	ECLRMC	Ensemble Correlation-Based Low-Rank Matrix Completion
2018-08-31	elasticnet	Elastic-Net for Sparse Estimation and Sparse PCA
2018-08-31	ellipsis	Tools for Working with ...
2018-08-31	excursions	Excursion Sets and Contour Credibility Regions for Random Fields
2018-08-31	fastR2	Foundations and Applications of Statistics Using R (2nd Edition)
2018-08-31	forge	Casting Values into Shape
2018-08-31	gamesGA	Genetic Algorithm for Sequential Symmetric Games
2018-08-31	ggperiodic	Easy Plotting of Periodic Data with 'ggplot2'
2018-08-31	gustave	A User-Oriented Statistical Toolkit for Analytical Variance Estimation
2018-08-31	hglm	Hierarchical Generalized Linear Models
2018-08-31	HGSL	Heterogeneous Group Square-Root Lasso
2018-08-31	hypergate	Machine Learning of Hyperrectangular Gating Strategies for High-Dimensional Cytometry
2018-08-31	iMediate	Likelihood Methods for Mediation Analysis
2018-08-31	ldbounds	Lan-DeMets Method for Group Sequential Boundaries
2018-08-31	logbin	Relative Risk Regression Using the Log-Binomial Model
2018-08-31	loose.rock	Set of Functions to Use in Survival Analysis and in Data Science
2018-08-31	MAc	Meta-Analysis with Correlations
2018-08-31	MAd	Meta-Analysis with Mean Differences
2018-08-31	nearfar	Near-Far Matching
2018-08-31	normalp	Routines for Exponential Power Distribution
2018-08-31	npmlreg	Nonparametric Maximum Likelihood Estimation for Random Effect Models
2018-08-31	ows4R	Interface to OGC Web-Services (OWS)
2018-08-31	pencopula	Flexible Copula Density Estimation with Penalized Hierarchical B-Splines
2018-08-31	plotscale	Scale Graphics Devices Using Plot Dimensions
2018-08-31	radjust	Replicability Adjusted p-Values for Two Independent Studies with Multiple Endpoints
2018-08-31	Rambo	The Random Subgraph Model
2018-08-31	repec	Access RePEc Data Through API
2018-08-31	rifle	Sparse Generalized Eigenvalue Problem
2018-08-31	rindex	Indexing for R
2018-08-31	runner	Running Operations for Vectors
2018-08-31	sinew	Create 'roxygen2' Skeleton with Information from Function Script
2018-08-31	smartdata	Data Preprocessing
2018-08-31	SparseLPM	The Sparse Latent Position Model for Nonnegative Interaction Data
2018-08-31	stocks	Stock Market Analysis
2018-08-31	takos	Analysis of Differential Calorimetry Scans
2018-08-31	TauP.R	Earthquake Traveltime Calculations for 1-D Earth Models
2018-08-31	taxonomizr	Functions to Work with NCBI Accessions and Taxonomy
2018-08-31	testDriveR	Teaching Data for Statistics and Data Science
2018-08-31	wrassp	Interface to the 'ASSP' Library
2018-08-30	ambient	A Generator of Multidimensional Noise
2018-08-30	aods3	Analysis of Overdispersed Data using S3 Methods
2018-08-30	AssetCorr	Estimating Asset Correlations from Default Data
2018-08-30	bayesImageS	Bayesian Methods for Image Segmentation using a Potts Model
2018-08-30	chicane	Capture Hi-C Analysis Engine
2018-08-30	detect	Analyzing Wildlife Data with Detection Error
2018-08-30	doBy	Groupwise Statistics, LSmeans, Linear Contrasts, Utilities
2018-08-30	doremi	Dynamics of Return to Equilibrium During Multiple Inputs
2018-08-30	earlygating	Properties of Bayesian Early Gating Designs
2018-08-30	evoper	Evolutionary Parameter Estimation for 'Repast Simphony' Models
2018-08-30	flexCWM	Flexible Cluster-Weighted Modeling
2018-08-30	g3viz	Visualize Genomic Mutation Data Using an Interactive Lollipop Diagram
2018-08-30	idm	Incremental Decomposition Methods
2018-08-30	ledger	Utilities for Importing Data from Plaintext Accounting Files
2018-08-30	lero.lero	Generate 'Lero Lero' Quotes
2018-08-30	lsm	Estimation of the log Likelihood of the Saturated Model
2018-08-30	ohtadstats	Tomoka Ohta D Statistics
2018-08-30	OOBCurve	Out of Bag Learning Curve
2018-08-30	ore	An R Interface to the Onigmo Regular Expression Library
2018-08-30	PeerPerformance	Luck-Corrected Peer Performance Analysis in R
2018-08-30	profExtrema	Compute and Visualize Profile Extrema Functions
2018-08-30	qoma.smuggler	Transport Data and Commands Across the 'FAME' / 'R' Border
2018-08-30	RiskPortfolios	Computation of Risk-Based Portfolios
2018-08-30	rmake	Makefile Generator for R Analytical Projects
2018-08-30	smfsb	Stochastic Modelling for Systems Biology
2018-08-30	surrosurvROC	Surrogate Survival ROC
2018-08-30	tuneRanger	Tune Random Forest of the 'ranger' Package
2018-08-29	apaTables	Create American Psychological Association (APA) Style Tables
2018-08-29	approximator	Bayesian Prediction of Complex Computer Codes
2018-08-29	BPEC	Bayesian Phylogeographic and Ecological Clustering
2018-08-29	fdANOVA	Analysis of Variance for Univariate and Multivariate Functional Data
2018-08-29	IPSUR	Introduction to Probability and Statistics Using R
2018-08-29	IsoriX	Isoscape Computation and Inference of Spatial Origins using Mixed Models
2018-08-29	madness	Automatic Differentiation of Multivariate Operations
2018-08-29	mipfp	Multidimensional Iterative Proportional Fitting and Alternative Models
2018-08-29	ncodeR	Techniques for Automated Classifiers
2018-08-29	rtdists	Response Time Distributions
2018-08-29	SpNetPrep	Linear Network Preprocessing for Spatial Statistics
2018-08-29	srp	Smooth-Rough Partitioning of the Regression Coefficients
2018-08-29	stima	Simultaneous Threshold Interaction Modeling Algorithm
2018-08-29	vaersvax	US Vaccine Adverse Event Reporting System (VAERS) Vaccine Data for Present
2018-08-29	VarSelLCM	Variable Selection for Model-Based Clustering of Mixed-Type Data Set with Missing Values
2018-08-29	xtable	Export Tables to LaTeX or HTML
2018-08-28	cwhmisc	Miscellaneous Functions for Math, Plotting, Printing, Statistics, Strings, and Tools
2018-08-28	cytometree	Automated Cytometry Gating and Annotation
2018-08-28	epitrix	Small Helpers and Tricks for Epidemics Analysis
2018-08-28	fingerPro	Sediment Source Fingerprinting
2018-08-28	frailtySurv	General Semiparametric Shared Frailty Model
2018-08-28	geoelectrics	3D-Visualization of Geoelectric Resistivity Measurement Profiles
2018-08-28	gets	General-to-Specific (GETS) Modelling and Indicator Saturation Methods
2018-08-28	gmapsdistance	Distance and Travel Time Between Two Points from Google Maps
2018-08-28	mBvs	Bayesian Variable Selection Methods for Multivariate Data
2018-08-28	mlr	Machine Learning in R
2018-08-28	plsdof	Degrees of Freedom and Statistical Inference for Partial Least Squares Regression
2018-08-28	plsRbeta	Partial Least Squares Regression for Beta Regression Models
2018-08-28	PoweR	Computation of Power and Level Tables for Hypothesis Tests
2018-08-28	rtypeform	Interface to 'typeform' Results
2018-08-28	SSLASSO	The Spike-and-Slab LASSO
2018-08-28	ZIM	Zero-Inflated Models (ZIM) for Count Time Series with Excess Zeros
2018-08-27	CalibratR	Mapping ML Scores to Calibrated Predictions
2018-08-27	calpassapi	R Interface to Access CalPASS API
2018-08-27	cloudml	Interface to the Google Cloud Machine Learning Platform
2018-08-27	eDMA	Dynamic Model Averaging with Grid Search
2018-08-27	georob	Robust Geostatistical Analysis of Spatial Data
2018-08-27	leaflet	Create Interactive Web Maps with the JavaScript 'Leaflet' Library
2018-08-27	MCMCvis	Tools to Visualize, Manipulate, and Summarize MCMC Output
2018-08-27	miceMNAR	Missing not at Random Imputation Models for Multiple Imputation by Chained Equation
2018-08-27	pdp	Partial Dependence Plots
2018-08-27	prob	Elementary Probability on Finite Sample Spaces
2018-08-27	projections	Project Future Case Incidence
2018-08-27	R.utils	Various Programming Utilities
2018-08-27	RRreg	Correlation and Regression Analyses for Randomized Response Data
2018-08-27	tidycensus	Load US Census Boundary and Attribute Data as 'tidyverse' and 'sf'-Ready Data Frames
2018-08-27	vpc	Create Visual Predictive Checks
2018-08-26	bgsmtr	Bayesian Group Sparse Multi-Task Regression
2018-08-26	funique	A Faster Unique Function
2018-08-26	future.apply	Apply Function to Elements in Parallel using Futures
2018-08-26	gimme	Group Iterative Multiple Model Estimation
2018-08-26	GPRMortality	Gaussian Process Regression for Mortality Rates
2018-08-26	mclustcomp	Measures for Comparing Clusters
2018-08-26	mlVAR	Multi-Level Vector Autoregression
2018-08-26	R.rsp	Dynamic Generation of Scientific Reports
2018-08-26	sspse	Estimating Hidden Population Size using Respondent Driven Sampling Data
2018-08-26	supc	The Self-Updating Process Clustering Algorithms
2018-08-25	coopProductGame	Cooperative Aspects of Linear Production Programming Problems
2018-08-25	ergm.count	Fit, Simulate and Diagnose Exponential-Family Models for Networks with Count Edges
2018-08-25	ergm.rank	Fit, Simulate and Diagnose Exponential-Family Models for Rank-Order Relational Data
2018-08-25	ergm.userterms	User-specified Terms for the statnet Suite of Packages
2018-08-25	flip	Multivariate Permutation Tests
2018-08-25	graphTweets	Visualise Twitter Interactions
2018-08-25	hydroscoper	Interface to the Greek National Data Bank for Hydrometeorological Information
2018-08-25	latentnet	Latent Position and Cluster Models for Statistical Networks
2018-08-25	mrMLM	Multi-Locus Random-SNP-Effect Mixed Linear Model Tools for Genome-Wide Association Study
2018-08-25	mrMLM.GUI	Multi-Locus Random-SNP-Effect Mixed Linear Model Tools for Genome-Wide Association Study
2018-08-25	ordinal	Regression Models for Ordinal Data
2018-08-25	startup	Friendly R Startup Configuration
2018-08-25	strvalidator	Process Control and Internal Validation of Forensic STR Kits
2018-08-25	symDMatrix	Partitioned Symmetric Matrices
2018-08-25	TeXCheckR	Parses LaTeX Documents for Errors
2018-08-25	tfdatasets	Interface to 'TensorFlow' Datasets
2018-08-25	tfruns	Training Run Tools for 'TensorFlow'
2018-08-24	accelerometry	Functions for Processing Accelerometer Data
2018-08-24	adiv	Analysis of Diversity
2018-08-24	bacistool	Bayesian Classification and Information Sharing (BaCIS) Tool for the Design of Multi-Group Phase II Clinical Trials
2018-08-24	BGData	A Suite of Packages for Analysis of Big Genomic Data
2018-08-24	binGroup	Evaluation and Experimental Design for Binomial Group Testing
2018-08-24	BMRBr	'BMRB' File Downloader
2018-08-24	btergm	Temporal Exponential Random Graph Models by Bootstrapped Pseudolikelihood
2018-08-24	depmixS4	Dependent Mixture Models - Hidden Markov Models of GLMs and Other Distributions in S4
2018-08-24	ggthemes	Extra Themes, Scales and Geoms for 'ggplot2'
2018-08-24	gsynth	Generalized Synthetic Control Method
2018-08-24	iC10TrainingData	Training Datasets for iC10 Package
2018-08-24	krige	Geospatial Kriging with Metropolis Sampling
2018-08-24	lucid	Printing Floating Point Numbers in a Human-Friendly Format
2018-08-24	mvglmmRank	Multivariate Generalized Linear Mixed Models for Ranking Sports Teams
2018-08-24	ncappc	NCA Calculations and Population Model Diagnosis
2018-08-24	optiSel	Optimum Contribution Selection and Population Genetics
2018-08-24	perccalc	Estimate Percentiles from an Ordered Categorical Variable
2018-08-24	plsgenomics	PLS Analyses for Genomics
2018-08-24	portfolio.optimization	Contemporary Portfolio Optimization
2018-08-24	quickmatch	Quick Generalized Full Matching
2018-08-24	RcmdrPlugin.NMBU	R Commander Plug-in for University Level Applied Statistics
2018-08-24	robeth	R Functions for Robust Statistics
2018-08-24	rtrim	Trends and Indices for Monitoring Data
2018-08-24	scclust	Size-Constrained Clustering
2018-08-24	stepPenal	Stepwise Forward Variable Selection in Penalized Regression
2018-08-24	survxai	Visualization of the Local and Global Survival Model Explanations
2018-08-24	tidytidbits	A Collection of Tools and Helpers Extending the Tidyverse
2018-08-24	twl	Two-Way Latent Structure Clustering Model
2018-08-24	twoway	Analysis of Two-Way Tables
2018-08-24	wordcloud	Word Clouds
2018-08-24	xergm	Extensions of Exponential Random Graph Models
2018-08-24	xRing	Visualization and Correction of X-Ray Micro-Density Profiles
2018-08-23	ars	Adaptive Rejection Sampling
2018-08-23	BLR	Bayesian Linear Regression
2018-08-23	brnn	Bayesian Regularization for Feed-Forward Neural Networks
2018-08-23	car	Companion to Applied Regression
2018-08-23	cgmanalysis	Clean and Analyze Continuous Glucose Monitor Data
2018-08-23	CINNA	Deciphering Central Informative Nodes in Network Analysis
2018-08-23	coxed	Duration-Based Quantities of Interest for the Cox Proportional Hazards Model
2018-08-23	Epi	A Package for Statistical Analysis in Epidemiology
2018-08-23	essurvey	Download Data from the European Social Survey on the Fly
2018-08-23	fabricatr	Imagine Your Data Before You Collect It
2018-08-23	fixerapi	An R Client for the "Fixer.io" Currency API
2018-08-23	fs	Cross-Platform File System Operations Based on 'libuv'
2018-08-23	IndepTest	Nonparametric Independence Tests Based on Entropy Estimation
2018-08-23	kerasformula	A High-Level R Interface for Neural Nets
2018-08-23	manet	Multiple Allocation Model for Actor-Event Networks
2018-08-23	markovchain	Easy Handling Discrete Time Markov Chains
2018-08-23	PNADcIBGE	Downloading, Reading and Analysing PNADc Microdata
2018-08-23	predictmeans	Calculate Predicted Means for Linear Models
2018-08-23	Rdistance	Analyses for Distance-Sampling and Abundance Estimation
2018-08-23	roahd	Robust Analysis of High Dimensional Data
2018-08-23	rtide	Tide Heights
2018-08-23	sarima	Simulation and Prediction with Seasonal ARIMA Models
2018-08-23	sparseinv	Computation of the Sparse Inverse Subset
2018-08-23	xmlrpc2	Implementation of the Remote Procedure Call Protocol ('XML-RPC')
2018-08-22	BayesNetBP	Bayesian Network Belief Propagation
2018-08-22	collapsibleTree	Interactive Collapsible Tree Diagrams using 'D3.js'
2018-08-22	DoE.base	Full Factorials, Orthogonal Arrays and Base Utilities for DoE Packages
2018-08-22	Eagle	Multiple Locus Association Mapping on a Genome-Wide Scale
2018-08-22	eikosograms	The Picture of Probability
2018-08-22	geoknife	Web-Processing of Large Gridded Datasets
2018-08-22	geometa	Tools for Reading and Writing ISO/OGC Geographic Metadata
2018-08-22	GMSE	Generalised Management Strategy Evaluation Simulator
2018-08-22	hedgehog	Property-Based Testing
2018-08-22	highSCREEN	High-Throughput Screening for Plate Based Assays
2018-08-22	lfe	Linear Group Fixed Effects
2018-08-22	lidR	Airborne LiDAR Data Manipulation and Visualization for Forestry Applications
2018-08-22	lmridge	Linear Ridge Regression with Ridge Penalty and Ridge Statistics
2018-08-22	mboost	Model-Based Boosting
2018-08-22	microsamplingDesign	Finding Optimal Microsampling Designs for Non-Compartmental Pharmacokinetic Analysis
2018-08-22	phenocamr	Facilitates 'PhenoCam' Data Access and Time Series Post-Processing
2018-08-22	poppr	Genetic Analysis of Populations with Mixed Reproduction
2018-08-22	pwrFDR	FDR Power
2018-08-22	RJSDMX	R Interface to SDMX Web Services
2018-08-22	RSEIS	Seismic Time Series Analysis Tools
2018-08-22	rstantools	Tools for Developing R Packages Interfacing with 'Stan'
2018-08-22	rvinecopulib	High Performance Algorithms for Vine Copula Modeling
2018-08-22	SSBtools	Statistics Norway's Miscellaneous Tools
2018-08-22	TE	Insertion/Deletion Dynamics for Transposable Elements
2018-08-22	tidyhydat	Extract and Tidy Canadian 'Hydrometric' Data
2018-08-22	TLMoments	Calculate TL-Moments and Convert Them to Distribution Parameters
2018-08-22	TraMineRextras	TraMineR Extension
2018-08-21	decido	Bindings for 'Mapbox' Ear Cutting Triangulation Library
2018-08-21	iC10	A Copy Number and Expression-Based Classifier for Breast Tumours
2018-08-21	NCA	Necessary Condition Analysis
2018-08-21	planor	Generation of Regular Factorial Designs
2018-08-21	pls	Partial Least Squares and Principal Component Regression
2018-08-21	quickblock	Quick Threshold Blocking
2018-08-21	rdpower	Power Calculations for RD Designs
2018-08-21	rsolr	R to Solr Interface
2018-08-21	SIDES	Subgroup Identification Based on Differential Effect Search
2018-08-21	synchronicity	Boost Mutex Functionality in R
2018-08-21	ubci	Get Cryptocurrency Related Data by Upbit
2018-08-20	AdaptiveSparsity	Adaptive Sparsity Models
2018-08-20	agriTutorial	Tutorial Analysis of Some Agricultural Experiments
2018-08-20	cartools	Tools for Understanding Highway Performance
2018-08-20	ChannelAttribution	Markov Model for the Online Multi-Channel Attribution Problem
2018-08-20	con2aqi	Calculate the AQI from Pollutant Concentration
2018-08-20	egor	Import and Analyse Ego-Centered Network Data
2018-08-20	getProxy	Get Free Proxy IP and Port
2018-08-20	GWmodel	Geographically-Weighted Models
2018-08-20	ISAT	Extract Cell Density and Nearest Distance Based on 'PerkinElmer InForm' Software Output
2018-08-20	KeyboardSimulator	Simulate Keyboard Press and Mouse Click
2018-08-20	lagged	Classes and Methods for Lagged Objects
2018-08-20	ltmle	Longitudinal Targeted Maximum Likelihood Estimation
2018-08-20	MRHawkes	Multivariate Renewal Hawkes Process
2018-08-20	nCal	Nonlinear Calibration
2018-08-20	NRejections	Metrics for Multiple Testing with Correlated Outcomes
2018-08-20	panelView	Visualizing Panel Data with Dichotomous Treatments
2018-08-20	pGPx	Pseudo-Realizations for Gaussian Process Excursions
2018-08-20	phaseR	Phase Plane Analysis of One and Two Dimensional Autonomous ODE Systems
2018-08-20	rfoaas	R Interface to 'FOAAS'
2018-08-20	RLT	Reinforcement Learning Trees
2018-08-20	shinyFeedback	Displays User Feedback Next to Shiny Inputs
2018-08-20	shp2graph	Convert a SpatialLinesDataFrame Object to an 'igraph'-Class Object
2018-08-19	censusapi	Retrieve Data from the Census APIs
2018-08-19	cocktailApp	'shiny' App to Discover Cocktails
2018-08-19	datadr	Divide and Recombine for Large, Complex Data
2018-08-19	dwapi	A Client for 'data.world' REST API
2018-08-19	ELYP	Empirical Likelihood Analysis for the Cox Model and Yang-Prentice (2005) Model
2018-08-19	exifr	EXIF Image Data in R
2018-08-19	hrbrthemes	Additional Themes, Theme Components and Utilities for 'ggplot2'
2018-08-19	IPEC	Root Mean Square Curvature Calculation
2018-08-19	latticeDensity	Density Estimation and Nonparametric Regression on Irregular Regions
2018-08-19	lazyrmd	Render R Markdown Outputs Lazily
2018-08-19	microplot	Microplots (Sparklines) in 'LaTeX', 'Word', 'HTML', 'Excel'
2018-08-19	mockery	Mocking Library for R
2018-08-19	netjack	Tools for Working with Samples of Networks
2018-08-19	rangemodelR	Mid-Domain Effect and Species Richness
2018-08-19	SteinerNet	Steiner Tree Approach for Graph Analysis
2018-08-19	sweep	Tidy Tools for Forecasting
2018-08-19	timetk	A Tool Kit for Working with Time Series in R
2018-08-19	XML	Tools for Parsing and Generating XML Within R and S-Plus
2018-08-18	emplik2	Empirical Likelihood Ratio Test for Two Samples with Censored Data
2018-08-18	krm	Kernel Based Regression Models
2018-08-18	mar1s	Multiplicative AR(1) with Seasonal Processes
2018-08-18	modopt.matlab	'MatLab'-Style Modeling of Optimization Problems
2018-08-18	narray	Subset- And Name-Aware Array Utility Functions
2018-08-18	shapes	Statistical Shape Analysis
2018-08-18	tergm	Fit, Simulate and Diagnose Models for Network Evolution Based on Exponential-Family Random Graph Models
2018-08-18	truncreg	Truncated Gaussian Regression Models
2018-08-18	udapi	Urban Dictionary API Client
2018-08-18	VGAM	Vector Generalized Linear and Additive Models
2018-08-17	AbSim	Time Resolved Simulations of Antibody Repertoires
2018-08-17	airr	AIRR Data Representation Reference Library
2018-08-17	BAT	Biodiversity Assessment Tools
2018-08-17	bigstatsr	Statistical Tools for Filebacked Big Matrices
2018-08-17	covTestR	Covariance Matrix Tests
2018-08-17	DMMF	Daily Based Morgan-Morgan-Finney (DMMF) Soil Erosion Model
2018-08-17	emplik	Empirical Likelihood Ratio for Censored/Truncated Data
2018-08-17	ergm.ego	Fit, Simulate and Diagnose Exponential-Family Random Graph Models to Egocentrically Sampled Network Data
2018-08-17	GPrank	Gaussian Process Ranking of Multiple Time Series
2018-08-17	haploR	Query 'HaploReg', 'RegulomeDB', 'LDlink'
2018-08-17	hhi	Calculate and Visualize the Herfindahl-Hirschman Index
2018-08-17	imptree	Classification Trees with Imprecise Probabilities
2018-08-17	jsonstat	Interface to 'JSON-stat'
2018-08-17	LatticeDesign	Lattice-Based Space-Filling Designs
2018-08-17	matrixProfile	Matrix Profile
2018-08-17	metacom	Analysis of the 'Elements of Metacommunity Structure'
2018-08-17	muHVT	Constructing Hierarchical Voronoi Tessellations and Overlay Heatmap for Data Analysis
2018-08-17	optrdd	Optimized Regression Discontinuity Designs
2018-08-17	permubiome	A Permutation Based Test for Biomarker Discovery in Microbiome Data
2018-08-17	prc	Paired Response Curve
2018-08-17	pubmed.mineR	Text Mining of PubMed Abstracts
2018-08-17	randomForestSRC	Random Forests for Survival, Regression, and Classification (RF-SRC)
2018-08-17	rattle	Graphical User Interface for Data Science in R
2018-08-17	rcrtan	Criterion-Referenced Test Analysis
2018-08-17	rhli	An R Implementation of the FIS MarketMap C-Toolkit
2018-08-17	sandwich	Robust Covariance Matrix Estimators
2018-08-17	textutils	Utilities for Handling Strings and Text
2018-08-17	VarBundle	Read-Only Variable Bundles
2018-08-16	AST	Age-Spatial-Temporal Model
2018-08-16	batchtools	Tools for Computation on Batch Systems
2018-08-16	castor	Efficient Phylogenetics on Large Trees
2018-08-16	cmvnorm	The Complex Multivariate Gaussian Distribution
2018-08-16	datastructures	Implementation of Core Data Structures
2018-08-16	dyncomp	Complexity of Short and Coarse-Grained Time Series
2018-08-16	EGRET	Exploration and Graphics for RivEr Trends (EGRET)
2018-08-16	EGRETci	Exploration and Graphics for RivEr Trends (EGRET) Confidence Intervals
2018-08-16	EM.Fuzzy	EM Algorithm for Maximum Likelihood Estimation by Non-Precise Information
2018-08-16	ergm	Fit, Simulate and Diagnose Exponential-Family Models for Networks
2018-08-16	GenomicTools.fileHandler	File Handlers for Genomic Data Analysis
2018-08-16	LDheatmap	Graphical Display of Pairwise Linkage Disequilibria Between SNPs
2018-08-16	leanpubr	'Leanpub' API Interface
2018-08-16	lest	Vectorised Nested if-else Statements Similar to CASE WHEN in 'SQL'
2018-08-16	mapdeck	Interactive Maps Using 'Mapbox GL JS' and 'Deck.gl'
2018-08-16	mapedit	Interactive Editing of Spatial Data in R
2018-08-16	merlin	Mixed Effects Regression for Linear, Non-Linear and User-Defined Models
2018-08-16	mixchar	Mixture Model for the Deconvolution of Thermal Decay Curves
2018-08-16	mlt.docreg	Most Likely Transformations: Documentation and Regression Tests
2018-08-16	MVNBayesian	Bayesian Analysis Framework for MVN (Mixture) Distribution
2018-08-16	openEBGM	EBGM Scores for Mining Large Contingency Tables
2018-08-16	phonics	Phonetic Spelling Algorithms
2018-08-16	pkgconfig	Private Configuration for 'R' Packages
2018-08-16	RWDataPlyr	Read and Manipulate Data from 'RiverWare'
2018-08-16	SHELF	Tools to Support the Sheffield Elicitation Framework
2018-08-16	stpm	Stochastic Process Model for Analysis of Longitudinal and Time-to-Event Outcomes
2018-08-16	synthpop	Generating Synthetic Versions of Sensitive Microdata for Statistical Disclosure Control
2018-08-16	tm.plugin.mail	Text Mining E-Mail Plug-in
2018-08-16	trawl	Estimation and Simulation of Trawl Processes
2018-08-15	BMisc	Miscellaneous Functions for Panel Data, Quantiles, and Printing Results
2018-08-15	cholera	Amend, Augment and Aid Analysis of John Snow's Cholera Map
2018-08-15	choroplethr	Simplify the Creation of Choropleth Maps in R
2018-08-15	civis	R Client for the 'Civis data science API'
2018-08-15	distances	Tools for Distance Metrics
2018-08-15	ENMeval	Automated Runs and Evaluations of Ecological Niche Models
2018-08-15	helminthR	Access London Natural History Museum Host-Helminth Record Database
2018-08-15	mumm	Multiplicative Mixed Models using the Template Model Builder
2018-08-15	NormalBetaPrime	Normal Beta Prime Prior
2018-08-15	phreeqc	R Interface to Geochemical Modeling Software
2018-08-15	stilt	Separable Gaussian Process Interpolation (Emulation)
2018-08-15	sybil	Efficient Constrained Based Modelling
2018-08-15	tensr	Covariance Inference and Decompositions for Tensor Datasets
2018-08-15	vetr	Trust, but Verify
2018-08-14	BayesCTDesign	Two Arm Bayesian Clinical Trial Design with and Without Historical Control Data
2018-08-14	BootValidation	Adjusting for Optimism in 'glmnet' Regression using Bootstrapping
2018-08-14	DemoDecomp	Decompose Demographic Functions
2018-08-14	epiflows	Predicting Disease Spread from Flow Data
2018-08-14	fc	Standard Evaluation-Based Multivariate Function Composition
2018-08-14	geonapi	'GeoNetwork' API R Interface
2018-08-14	GmAMisc	Gianmarco Alberti Miscellaneous
2018-08-14	KScorrect	Lilliefors-Corrected Kolmogorov-Smirnov Goodness-of-Fit Tests
2018-08-14	LMfilteR	Filter Methods for Parameter Estimation in Linear Regression Models
2018-08-14	MALDIquantForeign	Import/Export Routines for 'MALDIquant'
2018-08-14	MANOVA.RM	Analysis of Multivariate Data and Repeated Measures Designs
2018-08-14	pmmlTransformations	Transforms Input Data from a PMML Perspective
2018-08-14	powerlmm	Power Analysis for Longitudinal Multilevel Models
2018-08-14	ProliferativeIndex	Calculates and Analyzes the Proliferative Index
2018-08-14	Quandl	API Wrapper for Quandl.com
2018-08-14	rfacebookstat	Load Data from Facebook API Marketing
2018-08-14	rplos	Interface to the Search API for 'PLoS' Journals
2018-08-14	rpsftm	Rank Preserving Structural Failure Time Models
2018-08-14	SDALGCP	Spatially Discrete Approximation to Log-Gaussian Cox Processes for Aggregated Disease Count Data
2018-08-14	snakecase	Convert Strings into any Case
2018-08-14	touchard	Touchard Model and Regression
2018-08-14	usethis	Automate Package and Project Setup
2018-08-14	vapour	Lightweight Access to the 'Geospatial Data Abstraction Library' ('GDAL')
2018-08-14	XGR	Exploring Genomic Relations for Enhanced Interpretation Through Enrichment, Similarity, Network and Annotation Analysis
2018-08-14	ZipRadius	Creates a Data Frame of US Zip Codes in a Given Radius from a Given US Zip Code
2018-08-13	bcp	Bayesian Analysis of Change Point Problems
2018-08-13	bigreadr	Read Large Text Files
2018-08-13	BLOQ	Impute and Analyze Data with Observations Below the Limit of Quantification
2018-08-13	boostmtree	Boosted Multivariate Trees for Longitudinal Data
2018-08-13	brandwatchR	'Brandwatch' API to R
2018-08-13	Brobdingnag	Very Large Numbers in R
2018-08-13	CSFA	Connectivity Scores with Factor Analysis
2018-08-13	DSAIRM	Dynamical Systems Approach to Immune Response Modeling
2018-08-13	EL2Surv	Empirical Likelihood (EL) for Comparing Two Survival Functions
2018-08-13	frailtyHL	Frailty Models via Hierarchical Likelihood
2018-08-13	grplasso	Fitting User-Specified Models with Group Lasso Penalty
2018-08-13	junctions	The Breakdown of Genomic Ancestry Blocks in Hybrid Lineages
2018-08-13	kirby21.base	Example Data from the Multi-Modal MRI 'Reproducibility' Resource
2018-08-13	kirby21.fmri	Example Functional Imaging Data from the Multi-Modal MRI 'Reproducibility' Resource
2018-08-13	kirby21.t1	Example T1 Structural Data from the Multi-Modal MRI 'Reproducibility' Resource
2018-08-13	ltable	Easy to Make (Lazy) Tables
2018-08-13	matlabr	An Interface for MATLAB using System Calls
2018-08-13	mccf1	Creates the MCC-F1 Curve and Calculates the MCC-F1 Metric and the Best Threshold
2018-08-13	netgwas	Network-Based Genome Wide Association Studies
2018-08-13	painter	Creation and Manipulation of Color Palettes
2018-08-13	patrick	Parameterized Unit Testing
2018-08-13	quadmatrix	Solving Quadratic Matrix Equations
2018-08-13	respirometry	Tools for Conducting and Analyzing Respirometry Experiments
2018-08-13	RQGIS	Integrating R with QGIS
2018-08-13	Rspotify	Access to Spotify API
2018-08-13	sars	Fit and Compare Species-Area Relationship Models Using Multimodel Inference
2018-08-13	SCPME	Shrinking Characteristics of Precision Matrix Estimators
2018-08-13	sequoia	Pedigree Inference from SNPs
2018-08-13	subprocess	Manage Sub-Processes in R
2018-08-13	togglr	'Toggl.com' Api for 'Rstudio'
2018-08-12	maditr	Pipe-Style Interface for 'data.table'
2018-08-12	mirt	Multidimensional Item Response Theory
2018-08-12	PSCBS	Analysis of Parent-Specific DNA Copy Numbers
2018-08-12	RagGrid	A Wrapper of the 'JavaScript' Library 'agGrid'
2018-08-11	ceterisParibus	Ceteris Paribus Profiles
2018-08-11	chorrrds	Music Chords Extraction
2018-08-11	clusrank	Wilcoxon Rank Sum Test for Clustered Data
2018-08-11	energy	E-Statistics: Multivariate Inference via the Energy of Data
2018-08-11	fasterElasticNet	An Amazing Fast Way to Fit Elastic Net
2018-08-11	glm2	Fitting Generalized Linear Models
2018-08-11	mosaic	Project MOSAIC Statistics and Mathematics Teaching Utilities
2018-08-11	nsapi	Connect to the NS (Dutch Railways) API
2018-08-11	roll	Rolling Statistics
2018-08-11	SuperLearner	Super Learner Prediction
2018-08-11	testthis	Utils and 'RStudio' Addins to Make Testing Even More Fun
2018-08-10	atlas	Stanford 'ATLAS' Search Engine API
2018-08-10	BGGE	Bayesian Genomic Linear Models Applied to GE Genome Selection
2018-08-10	BrailleR	Improved Access for Blind Users
2018-08-10	dnet	Integrative Analysis of Omics Data in Terms of Network, Evolution and Ontology
2018-08-10	genBaRcode	Analysis and Visualization Tools for Genetic Barcode Data
2018-08-10	imp4p	Imputation for Proteomics
2018-08-10	kernlab	Kernel-Based Machine Learning Lab
2018-08-10	libstableR	Fast and Accurate Evaluation, Random Number Generation and Parameter Estimation of Skew Stable Distributions
2018-08-10	MCMCprecision	Precision of Discrete Parameters in Transdimensional MCMC
2018-08-10	RcmdrPlugin.SCDA	Rcmdr Plugin for Designing and Analyzing Single-Case Experiments
2018-08-10	RSNNS	Neural Networks using the Stuttgart Neural Network Simulator (SNNS)
2018-08-10	smoothSurv	Survival Regression with Smoothed Error Distribution
2018-08-10	SnakeCharmR	R and Python Integration
2018-08-10	spGARCH	Spatial ARCH and GARCH Models (spGARCH)
2018-08-10	telefit	Estimation and Prediction for Remote Effects Spatial Process Models
2018-08-09	dMod	Dynamic Modeling and Parameter Estimation in ODE Models
2018-08-09	FedData	Functions to Automate Downloading Geospatial Data Available from Several Federated Data Sources
2018-08-09	GNE	Computation of Generalized Nash Equilibria
2018-08-09	hddtools	Hydrological Data Discovery Tools
2018-08-09	HMDHFDplus	Read Human Mortality Database and Human Fertility Database Data from the Web
2018-08-09	jcolors	Colors Palettes for R and 'ggplot2', Additional Themes for 'ggplot2'
2018-08-09	logKDE	Computing Log-Transformed Kernel Density Estimates for Positive Data
2018-08-09	MDSMap	High Density Genetic Linkage Mapping using Multidimensional Scaling
2018-08-09	mongolite	Fast and Simple 'MongoDB' Client for R
2018-08-09	PairViz	Visualization using Graph Traversal
2018-08-09	reclin	Record Linkage Toolkit
2018-08-09	scales	Scale Functions for Visualization
2018-08-09	socialmixr	Social Mixing Matrices for Infectious Disease Modelling
2018-08-09	stUPscales	Spatio-Temporal Uncertainty Propagation Across Multiple Scales
2018-08-09	tmap	Thematic Maps
2018-08-09	VariableScreening	High-Dimensional Screening for Semiparametric Longitudinal Regression
2018-08-09	vinereg	D-Vine Quantile Regression
2018-08-08	airGRteaching	Teaching Hydrological Modelling with the GR Rainfall-Runoff Models ('Shiny' Interface Included)
2018-08-08	CarletonStats	Functions for Statistics Classes at Carleton College
2018-08-08	cOde	Automated C Code Generation for 'deSolve', 'bvpSolve' and 'Sundials'
2018-08-08	datafsm	Estimating Finite State Machine Models from Data
2018-08-08	dlsem	Distributed-Lag Linear Structural Equation Models
2018-08-08	hpiR	House Price Indexes
2018-08-08	IDmining	Intrinsic Dimension for Data Mining
2018-08-08	iterpc	Efficient Iterator for Permutations and Combinations
2018-08-08	party	A Laboratory for Recursive Partytioning
2018-08-08	populationPDXdesign	Designing Population PDX Studies
2018-08-08	PRISMAstatement	Plot Flow Charts According to the "PRISMA" Statement
2018-08-08	taxa	Taxonomic Classes
2018-08-08	WCE	Weighted Cumulative Exposure Models
2018-08-07	archivist.github	Tools for Archiving, Managing and Sharing R Objects via GitHub
2018-08-07	english	Translate Integers into English
2018-08-07	ForecastComb	Forecast Combination Methods
2018-08-07	gRbase	A Package for Graphical Modelling in R
2018-08-07	gridsample	Tools for Grid-Based Survey Sampling Design
2018-08-07	gumbel	The Gumbel-Hougaard Copula
2018-08-07	HiResTEC	Non-Targeted Fluxomics on High-Resolution Mass-Spectrometry Data
2018-08-07	IDE	Integro-Difference Equation Spatio-Temporal Models
2018-08-07	kmed	Distance-Based k-Medoids
2018-08-07	Mqrcm	M-Quantile Regression Coefficients Modeling
2018-08-07	MSMwRA	Multivariate Statistical Methods with R Applications
2018-08-07	nilde	Nonnegative Integer Solutions of Linear Diophantine Equations with Applications
2018-08-07	nsROC	Non-Standard ROC Curve Analysis
2018-08-07	pbdMPI	Programming with Big Data – Interface to MPI
2018-08-07	rhosp	Side Effect Risks in Hospital : Simulation and Estimation
2018-08-07	roadoi	Find Free Versions of Scholarly Publications via Unpaywall
2018-08-07	rplotengine	R as a Plotting Engine
2018-08-07	tmaptools	Thematic Map Tools
2018-08-07	tsallisqexp	Tsallis q-Exp Distribution
2018-08-06	BEDMatrix	Extract Genotypes from a PLINK .bed File
2018-08-06	cmsaf	Tools for CM SAF NetCDF Data
2018-08-06	coda.base	A Basic Set of Functions for Compositional Data Analysis
2018-08-06	crochet	Implementation Helper for [ and [<- Of Custom Matrix-Like Types
2018-08-06	daarem	Damped Anderson Acceleration with Epsilon Monotonicity for Accelerating EM-Like Monotone Algorithms
2018-08-06	DALEX	Descriptive mAchine Learning EXplanations
2018-08-06	DSAIDE	Dynamical Systems Approach to Infectious Disease Epidemiology
2018-08-06	gasfluxes	Greenhouse Gas Flux Calculation from Chamber Measurements
2018-08-06	IMak	Item Maker
2018-08-06	LadR	Routines for Fit, Inference and Diagnostics in LAD Models
2018-08-06	LinkedMatrix	Column-Linked and Row-Linked Matrices
2018-08-06	MatrixLDA	Penalized Matrix-Normal Linear Discriminant Analysis
2018-08-06	mfGARCH	Mixed-Frequency GARCH Models
2018-08-06	nseval	A Clean API for Lazy and Non-Standard Evaluation
2018-08-06	ordinalClust	Ordinal Data Clustering, Co-Clustering and Classification
2018-08-06	PhySortR	A Fast, Flexible Tool for Sorting Phylogenetic Trees
2018-08-06	PQLseq	Efficient Mixed Model Analysis of Count Data in Large-Scale Genomic Sequencing Studies
2018-08-06	rcrossref	Client for Various 'CrossRef' 'APIs'
2018-08-06	TDA	Statistical Tools for Topological Data Analysis
2018-08-06	timeseriesdb	Manage Time Series for Official Statistics with R and PostgreSQL
2018-08-06	varImp	RF Variable Importance for Arbitrary Measures
2018-08-06	vars	VAR Modelling
2018-08-05	ICAOD	Optimal Designs for Nonlinear Models
2018-08-05	localIV	Estimation of Marginal Treatment Effects using Local Instrumental Variables
2018-08-05	MultiFit	Multivariate Multiscale Framework for Independence Tests
2018-08-05	nbc4va	Bayes Classifier for Verbal Autopsy Data
2018-08-05	PELVIS	Probabilistic Sex Estimate using Logistic Regression, Based on VISual Traits of the Human Os Coxae
2018-08-05	reticulate	Interface to 'Python'
2018-08-05	RobRex	Optimally Robust Influence Curves for Regression and Scale
2018-08-05	simmer.bricks	Helper Methods for 'simmer' Trajectories
2018-08-05	survsup	Plotting Survival Curves with Numbers at Risk Table
2018-08-04	FDboost	Boosting Functional Regression Models
2018-08-04	gtrendsR	Perform and Display Google Trends Queries
2018-08-04	kendallRandomWalks	Simulate and Visualize Kendall Random Walks and Related Distributions
2018-08-04	mvMORPH	Multivariate Comparative Tools for Fitting Evolutionary Models to Morphometric Data
2018-08-04	resampledata	Data Sets for Mathematical Statistics with Resampling in R
2018-08-04	ROptRegTS	Optimally Robust Estimation for Regression-Type Models
2018-08-04	RPANDA	Phylogenetic ANalyses of DiversificAtion
2018-08-04	simmer.plot	Plotting Methods for 'simmer'
2018-08-04	survminer	Drawing Survival Curves using 'ggplot2'
2018-08-03	ctl	Correlated Trait Locus (CTL) Mapping in R
2018-08-03	elliptic	Weierstrass and Jacobi Elliptic Functions
2018-08-03	ggformula	Formula Interface to the Grammar of Graphics
2018-08-03	ggplotify	Convert Plot to 'grob' or 'ggplot' Object
2018-08-03	hwwntest	Tests of White Noise using Wavelets
2018-08-03	nomisr	Access 'Nomis' UK Labour Market Data
2018-08-03	NPMLEcmprsk	Type-Specific Failure Rate and Hazard Rate on Competing Risks Data
2018-08-03	pre	Prediction Rule Ensembles
2018-08-03	rare	Linear Model with Tree-Based Lasso Regularization for Rare Features
2018-08-03	RobAStBase	Robust Asymptotic Statistics
2018-08-03	RobExtremes	Optimally Robust Estimation for Extreme Value Distributions
2018-08-03	RobLox	Optimally Robust Influence Curves and Estimators for Location and Scale
2018-08-03	RobLoxBioC	Infinitesimally Robust Estimators for Preprocessing -Omics Data
2018-08-03	ROptEst	Optimally Robust Estimation
2018-08-03	ROptEstOld	Optimally Robust Estimation - Old Version
2018-08-03	Tides	Quasi-Periodic Time Series Characteristics
2018-08-03	TOSTER	Two One-Sided Tests (TOST) Equivalence Testing
2018-08-03	urltools	Vectorised Tools for URL Handling and Parsing
2018-08-02	ADMMsigma	Penalized Precision Matrix Estimation via ADMM
2018-08-02	bayesplot	Plotting for Bayesian Models
2018-08-02	BivGeo	Basu-Dhar Bivariate Geometric Distribution
2018-08-02	cromwellDashboard	A Dashboard to Visualize Scientific Workflows in 'Cromwell'
2018-08-02	cxhull	Convex Hull
2018-08-02	disto	Unified Interface to Distance, Dissimilarity, Similarity Matrices
2018-08-02	GFE	Gross Flows Estimation under Complex Surveys
2018-08-02	GPCMlasso	Differential Item Functioning in Generalized Partial Credit Models
2018-08-02	HCT	Calculates Significance Criteria and Power for a Single Arm Trial
2018-08-02	heatwaveR	Detect Heatwaves and Cold-Spells
2018-08-02	hipread	Read Hierarchical Fixed Width Files
2018-08-02	LncFinder	LncRNA Identification and Analysis Using Heterologous Features
2018-08-02	omu	A Metabolomics Analysis Tool for Intuitive Figures and Convenient Metadata Collection
2018-08-02	pcgen	Reconstruction of Causal Networks for Data with Random Genetic Effects
2018-08-02	Rd2roxygen	Convert Rd to 'Roxygen' Documentation
2018-08-02	readmnist	Read MNIST Dataset
2018-08-02	rmi	Mutual Information Estimators
2018-08-02	rolocISCCNBS	A Colour List and Colour Metric Based on the ISCC-NBS System of Color Designation
2018-08-02	sparkbq	Google 'BigQuery' Support for 'sparklyr'
2018-08-02	SparseMDC	Implementation of SparseMDC Algorithm
2018-08-02	tribe	Play with the Tribe of Attributes
2018-08-02	ufs	Quantitative Analysis Made Accessible
2018-08-01	ARIbrain	All-Resolution Inference
2018-08-01	aws.kms	'AWS Key Management Service' Client Package
2018-08-01	CANSIM2R	Directly Extracts Complete CANSIM Data Tables
2018-08-01	climdex.pcic	PCIC Implementation of Climdex Routines
2018-08-01	colourvision	Colour Vision Models
2018-08-01	ContaminatedMixt	Model-Based Clustering and Classification with the Multivariate Contaminated Normal Distribution
2018-08-01	csvy	Import and Export CSV Data with a YAML Metadata Header
2018-08-01	discSurv	Discrete Time Survival Analysis
2018-08-01	distrMod	Object Oriented Implementation of Probability Models
2018-08-01	ggsom	New Data Visualisations for SOMs Cluster
2018-08-01	hyper2	The Hyperdirichlet Distribution, Mark 2
2018-08-01	ICcalib	Cox Model with Interval-Censored Starting Time of a Covariate
2018-08-01	lfl	Linguistic Fuzzy Logic
2018-08-01	mbbefd	Maxwell Boltzmann Bose Einstein Fermi Dirac Distribution and Destruction Rate Modelling
2018-08-01	mvctm	Multivariate Variance Components Tests for Multilevel Data
2018-08-01	netregR	Regression of Network Responses
2018-08-01	nodbi	'NoSQL' Database Connector
2018-08-01	RandVar	Implementation of Random Variables
2018-08-01	redcapAPI	Interface to 'REDCap'
2018-08-01	spef	Semiparametric Estimating Functions
2018-08-01	tcR	Advanced Data Analysis of Immune Receptor Repertoires
2018-08-01	validate	Data Validation Infrastructure
2018-07-31	adaptMT	Adaptive P-Value Thresholding for Multiple Hypothesis Testing with Side Information
2018-07-31	alpaca	Fit GLM's with High-Dimensional k-Way Fixed Effects
2018-07-31	anyflights	Download Air Travel Data for Specified Years and Airports
2018-07-31	BDP2	Bayesian Adaptive Designs for Phase II Trials with Binary Endpoint
2018-07-31	beezdemand	Behavioral Economic Easy Demand
2018-07-31	biglmm	Bounded Memory Linear and Generalized Linear Models
2018-07-31	corrr	Correlations in R
2018-07-31	dhh	A Heavy-Headed Distribution
2018-07-31	EMSHS	EM Algorithm for Bayesian Shrinkage Approach with Structural Information Incorporated
2018-07-31	flifo	Don't Get Stuck with Stacks in R
2018-07-31	funModeling	Exploratory Data Analysis and Data Preparation Tool-Box Book
2018-07-31	gcKrig	Analysis of Geostatistical Count Data using Gaussian Copulas
2018-07-31	geomerge	Geospatial Data Integration
2018-07-31	janitor	Simple Tools for Examining and Cleaning Dirty Data
2018-07-31	jarbes	Just a Rather Bayesian Evidence Synthesis
2018-07-31	Kernelheaping	Kernel Density Estimation for Heaped and Rounded Data
2018-07-31	makeParallel	Transform Serial R Code into Parallel R Code
2018-07-31	phylotaR	Automated Phylogenetic Sequence Cluster Identification from 'GenBank'
2018-07-31	RobAStRDA	Interpolation Grids for Packages of the 'RobASt' - Family of Packages
2018-07-31	robmixglm	Robust Generalized Linear Models (GLM) using Mixtures
2018-07-31	RQEntangle	Quantum Entanglement of Bipartite System
2018-07-31	SingleCaseES	A Calculator for Single-Case Effect Sizes
2018-07-31	statip	Statistical Functions for Probability Distributions and Regression
2018-07-31	uniformly	Uniform Sampling
2018-07-31	venn	Draw Venn Diagrams
2018-07-31	VFP	Variance Function Program
2018-07-30	aws	Adaptive Weights Smoothing
2018-07-30	cregg	Simple Conjoint Tidying, Analysis, and Visualization
2018-07-30	CrossClustering	A Partial Clustering Algorithm
2018-07-30	cytofan	Plot Fan Plots for Cytometry Data using 'ggplot2'
2018-07-30	dcmodify	Modify Data Using Externally Defined Modification Rules
2018-07-30	debugr	Debug Tool to Watch Objects/Expressions While Running an R Script
2018-07-30	DecisionAnalysis	Implementation of Multi Objective Decision Analysis
2018-07-30	dotCall64	Enhanced Foreign Function Interface Supporting Long Vectors
2018-07-30	draw	Wrapper Functions for Producing Graphics
2018-07-30	emil	Evaluation of Modeling without Information Leakage
2018-07-30	glassoFast	Fast Graphical LASSO
2018-07-30	glycanr	Tools for Analysing N-Glycan Data
2018-07-30	gren	Adaptive Group-Regularized Logistic Elastic Net Regression
2018-07-30	growthcurver	Simple Metrics to Summarize Growth Curves
2018-07-30	IntClust	Integration of Multiple Data Sets with Clustering Techniques
2018-07-30	lilikoi	Metabolomics Personalized Pathway Analysis Tool
2018-07-30	lintools	Manipulation of Linear Systems of (in)Equalities
2018-07-30	logitnorm	Functions for the Logitnormal Distribution
2018-07-30	MultipleBubbles	Test and Detection of Explosive Behaviors for Time Series
2018-07-30	PHEindicatormethods	Common Public Health Statistics and their Confidence Intervals
2018-07-30	poolVIM	Gene-Based Association Tests using the Actual Impurity Reduction (AIR) Variable Importance
2018-07-30	qsub	Running Commands Remotely on 'Gridengine' Clusters
2018-07-30	QuClu	Quantile-Based Clustering Algorithms
2018-07-30	REIDS	Random Effects for the Identification of Differential Splicing
2018-07-30	rLandsat	Landsat Data Complete Download Process
2018-07-30	Rmpfr	R MPFR - Multiple Precision Floating-Point Reliable
2018-07-30	roloc	Convert Colour Specification to Colour Name
2018-07-30	rspa	Adapt Numerical Records to Fit (in)Equality Restrictions
2018-07-30	Rspc	Nelson Rules for Control Charts
2018-07-30	ruin	Simulation of Various Risk Processes
2018-07-30	scoringRules	Scoring Rules for Parametric and Simulated Distribution Forecasts
2018-07-30	SIRE	Finding Feedback Effects in SEM and Testing for Their Significance
2018-07-30	stinepack	Stineman, a Consistently Well Behaved Method of Interpolation
2018-07-30	swdft	Sliding Window Discrete Fourier Transform (SWDFT)
2018-07-30	syt	Standard Young Tableaux
2018-07-30	trend	Non-Parametric Trend Tests and Change-Point Detection
2018-07-29	arulesSequences	Mining Frequent Sequences
2018-07-29	copulaedas	Estimation of Distribution Algorithms Based on Copulas
2018-07-29	diffobj	Diffs for R Objects
2018-07-29	geoR	Analysis of Geostatistical Data
2018-07-29	HDclust	Clustering High Dimensional Data with Hidden Markov Model on Variable Blocks
2018-07-29	metaDigitise	Extract and Summarise Data from Published Figures
2018-07-29	RcppCNPy	Read-Write Support for 'NumPy' Files via 'Rcpp'
2018-07-29	reghelper	Helper Functions for Regression Analysis
2018-07-29	siplab	Spatial Individual-Plant Modelling
2018-07-29	sylly	Hyphenation and Syllable Counting for Text Analysis
2018-07-29	taRifx	Collection of Utility and Convenience Functions
2018-07-29	tensorA	Advanced Tensor Arithmetic with Named Indices
2018-07-29	tm	Text Mining Package
2018-07-28	catR	Generation of IRT Response Patterns under Computerized Adaptive Testing
2018-07-28	demu	Optimal Design Emulators via Point Processes
2018-07-28	e1071	Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien
2018-07-28	fedregs	Text Analysis of the US Code of Federal Regulations
2018-07-28	fredr	An R Client for the 'FRED' API
2018-07-28	Hapi	Inference of Chromosome-Length Haplotypes Using Genomic Data of Single Gamete Cells
2018-07-28	InterVA5	Replicate and Analyse 'InterVA5'
2018-07-28	labelVector	Label Attributes for Atomic Vectors
2018-07-28	makedummies	Create Dummy Variables from Categorical Data
2018-07-28	RanglaPunjab	Displays Palette of 5 Colors
2018-07-28	shinyanimate	Animation for 'shiny' Elements
2018-07-28	SurvTrunc	Analysis of Doubly Truncated Data
2018-07-28	trread	Transit File Reader
2018-07-28	woeBinning	Supervised Weight of Evidence Binning of Numeric Variables and Factors
2018-07-28	xpose	Diagnostics for Pharmacometric Models
2018-07-27	aws.signature	Amazon Web Services Request Signatures
2018-07-27	BinQuasi	Analyzing Replicated ChIP Sequencing Data Using Quasi-Likelihood
2018-07-27	bootnet	Bootstrap Methods for Various Network Estimation Routines
2018-07-27	CBCgrps	Compare Baseline Characteristics Between Groups
2018-07-27	CSeqpat	Frequent Contiguous Sequential Pattern Mining of Text
2018-07-27	epanet2toolkit	Call 'EPANET' Functions to Simulate Pipe Networks
2018-07-27	exact2x2	Exact Tests and Confidence Intervals for 2x2 Tables
2018-07-27	funLBM	Model-Based Co-Clustering of Functional Data
2018-07-27	geomorph	Geometric Morphometric Analyses of 2D/3D Landmark Data
2018-07-27	ggpage	Creates Page Layout Visualizations
2018-07-27	igraph	Network Analysis and Visualization
2018-07-27	mable	Maximum Approximate Bernstein Likelihood Estimation
2018-07-27	mice	Multivariate Imputation by Chained Equations
2018-07-27	MMDvariance	Detecting Differentially Variable Genes Using the Mixture of Marginal Distributions
2018-07-27	MonetDBLite	In-Process Version of 'MonetDB'
2018-07-27	munsellinterpol	Interpolate Munsell Renotation Data from Hue/Chroma to CIE/RGB
2018-07-27	nimble	MCMC, Particle Filtering, and Programmable Hierarchical Modeling
2018-07-27	perturbR	Random Perturbation of Count Matrices
2018-07-27	polyclip	Polygon Clipping
2018-07-27	postal	United States Postal Service API Interface
2018-07-27	rncl	An Interface to the Nexus Class Library
2018-07-27	RPS	Resistant Procrustes Superimposition
2018-07-27	rrtable	Reproducible Research with a Table of R Codes
2018-07-27	RSentiment	Analyse Sentiment of English Sentences
2018-07-27	rviewgraph	Animated Graph Layout Viewer
2018-07-27	SemNetCleaner	An Automated Cleaning Tool for Semantic and Linguistic Data
2018-07-27	UnitCircle	Check if Roots of a Polynomial Lie Outside the Unit Circle
2018-07-27	updog	Flexible Genotyping for Polyploids
2018-07-27	WeibullR	Weibull Analysis for Reliability Engineering
2018-07-26	aws.ec2metadata	Get EC2 Instance Metadata
2018-07-26	basicTrendline	Add Trendline and Confidence Interval of Basic Regression Models to Plot
2018-07-26	CEC	Cross-Entropy Clustering
2018-07-26	clusterCrit	Clustering Indices
2018-07-26	conjoint	An Implementation of Conjoint Analysis Method
2018-07-26	dnr	Simulate Dynamic Networks using Exponential Random Graph Models (ERGM) Family
2018-07-26	GPoM	Generalized Polynomial Modelling
2018-07-26	INLABMA	Bayesian Model Averaging with INLA
2018-07-26	lspls	LS-PLS Models
2018-07-26	NeuralNetTools	Visualization and Analysis Tools for Neural Networks
2018-07-26	numOSL	Numeric Routines for Optically Stimulated Luminescence Dating
2018-07-26	pec	Prediction Error Curves for Risk Prediction Models in Survival Analysis
2018-07-26	penalizedSVM	Feature Selection SVM using Penalty Functions
2018-07-26	projmanr	Project Management Tools
2018-07-26	prozor	Minimal Protein Set Explaining Peptide Spectrum Matches
2018-07-26	reconstructr	Session Reconstruction and Analysis
2018-07-26	regplot	Enhanced Regression Nomogram Plot
2018-07-26	ridge	Ridge Regression with Automatic Selection of the Penalty Parameter
2018-07-26	SPCAvRP	Sparse Principal Component Analysis via Random Projections (SPCAvRP)
2018-07-26	stepp	Subpopulation Treatment Effect Pattern Plot (STEPP)
2018-07-26	swgee	Simulation Extrapolation Inverse Probability Weighted Generalized Estimating Equations
2018-07-25	bnclassify	Learning Discrete Bayesian Network Classifiers from Data
2018-07-25	broman	Karl Broman's R Code
2018-07-25	clifro	Easily Download and Visualise Climate Data from CliFlo
2018-07-25	colorscience	Color Science Methods and Data
2018-07-25	dbplyr	A 'dplyr' Back End for Databases
2018-07-25	exprso	Rapid Deployment of Machine Learning Algorithms
2018-07-25	forward	Robust Analysis using Forward Search
2018-07-25	GREP2	GEO RNA-Seq Experiments Processing Pipeline
2018-07-25	ks	Kernel Smoothing
2018-07-25	MapGAM	Mapping Smoothed Effect Estimates from Individual-Level Data
2018-07-25	measures	Performance Measures for Statistical Learning
2018-07-25	metap	Meta-Analysis of Significance Values
2018-07-25	netCoin	Interactive Analytic Networks
2018-07-25	oddsratio	Odds Ratio Calculation for GAM(M)s & GLM(M)s
2018-07-25	shinyjqui	'jQuery UI' Interactions and Effects for Shiny
2018-07-25	simglm	Simulate Models Based on the Generalized Linear Model
2018-07-25	SmartEDA	Summarize and Explore the Data
2018-07-25	textTinyR	Text Processing for Small or Big Data Files
2018-07-25	umap	Uniform Manifold Approximation and Projection
2018-07-25	weibulltools	Statistical Methods for Life Data Analysis
2018-07-25	yaml	Methods to Convert R Data to YAML and Back
2018-07-24	aftgee	Accelerated Failure Time Model with Generalized Estimating Equations
2018-07-24	anMC	Compute High Dimensional Orthant Probabilities
2018-07-24	CAISEr	Comparison of Algorithms with Iterative Sample Size Estimation
2018-07-24	CaliCo	Code Calibration in a Bayesian Framework
2018-07-24	ERSA	Exploratory Regression 'Shiny' App
2018-07-24	inlabru	Spatial Inference using Integrated Nested Laplace Approximation
2018-07-24	mvst	Bayesian Inference for the Multivariate Skew-t Model
2018-07-24	pcr	Analyzing Real-Time Quantitative PCR Data
2018-07-24	piecewiseSEM	Piecewise Structural Equation Modeling
2018-07-24	Rhpc	Permits *apply() Style Dispatch for 'HPC'
2018-07-24	RhpcBLASctl	Control the Number of Threads on 'BLAS'
2018-07-24	safer	Encrypt and Decrypt Strings, R Objects and Files
2018-07-24	sigQC	Quality Control Metrics for Gene Signatures
2018-07-24	surveillance	Temporal and Spatio-Temporal Modeling and Monitoring of Epidemic Phenomena
2018-07-24	taxize	Taxonomic Information from Around the Web
2018-07-24	yaImpute	Nearest Neighbor Observation Imputation and Evaluation Tools
2018-07-23	bst	Gradient Boosting
2018-07-23	Copula.Markov	Copula-Based Estimation and Statistical Process Control for Serially Correlated Time Series
2018-07-23	ctmcd	Estimating the Parameters of a Continuous-Time Markov Chain from Discrete-Time Data
2018-07-23	diffdf	Dataframe Difference Tool
2018-07-23	distrDoc	Documentation for 'distr' Family of R Packages
2018-07-23	distrEllipse	S4 Classes for Elliptically Contoured Distributions
2018-07-23	distrRmetrics	Distribution Classes for Distributions from Rmetrics
2018-07-23	distrSim	Simulation Classes Based on Package 'distr'
2018-07-23	distrTEst	Estimation and Testing Classes Based on Package 'distr'
2018-07-23	ibd	Incomplete Block Designs
2018-07-23	mapsapi	'sf'-Compatible Interface to 'Google Maps' APIs
2018-07-23	matrixStats	Functions that Apply to Rows and Columns of Matrices (and to Vectors)
2018-07-23	meta4diag	Meta-Analysis for Diagnostic Test Studies
2018-07-23	moonBook	Functions and Datasets for the Book by Keon-Woong Moon
2018-07-23	MuMIn	Multi-Model Inference
2018-07-23	nmaINLA	Network Meta-Analysis using Integrated Nested Laplace Approximations
2018-07-23	officer	Manipulation of Microsoft Word and PowerPoint Documents
2018-07-23	RRPP	Linear Model Evaluation with Randomized Residuals in a Permutation Procedure
2018-07-23	samplesize4surveys	Sample Size Calculations for Complex Surveys
2018-07-23	splitstackshape	Stack and Reshape Datasets After Splitting Concatenated Values
2018-07-23	TeachingSampling	Selection of Samples and Parameter Estimation in Finite Population
2018-07-23	textclean	Text Cleaning Tools
2018-07-23	WordR	Rendering Word Documents with R Inline Code
2018-07-23	xmrr	Generate XMR Control Chart Data from Time-Series Data
2018-07-22	BigVAR	Dimension Reduction Methods for Multivariate Time Series
2018-07-22	BRISC	Fast Inference for Large Spatial Datasets using BRISC
2018-07-22	CAinterprTools	Graphical Aid in Correspondence Analysis Interpretation and Significance Testings
2018-07-22	distrEx	Extensions of Package 'distr'
2018-07-22	dsr	Compute Directly Standardized Rates, Ratios and Differences
2018-07-22	envnames	Track User-Defined Environment Names
2018-07-22	forecastHybrid	Convenient Functions for Ensemble Time Series Forecasts
2018-07-22	fpeek	Check Text Files Content at a Glance
2018-07-22	ggiraphExtra	Make Interactive 'ggplot2'. Extension to 'ggplot2' and 'ggiraph'
2018-07-22	linkspotter	Bivariate Correlations Calculation and Visualization
2018-07-22	movecost	Calculation of Accumulated Cost Surface and Least-Cost Paths Related to Human Movement Across the Landscape
2018-07-22	MSbox	Mass Spectrometry Tools
2018-07-22	rbit	Binary Indexed Tree
2018-07-22	sundialr	An Interface to 'SUNDIALS' Ordinary Differential Equation (ODE) Solvers
2018-07-22	support	Support Points
2018-07-22	survutils	Utility Functions for Survival Analysis
2018-07-22	ztable	Zebra-Striped Tables in LaTeX and HTML Formats
2018-07-21	BAMBI	Bivariate Angular Mixture Models
2018-07-21	compound.Cox	Univariate Feature Selection and Compound Covariate for Predicting Survival
2018-07-21	diffusionMap	Diffusion Map
2018-07-21	dlookr	Tools for Data Diagnosis, Exploration, Transformation
2018-07-21	elmNNRcpp	The Extreme Learning Machine Algorithm
2018-07-21	ggpval	Annotate Statistical Tests for 'ggplot2'
2018-07-21	mpath	Regularized Linear Models
2018-07-21	multistateutils	Utility Functions for Parametric Multi-State Models
2018-07-21	nmslibR	Non Metric Space (Approximate) Library
2018-07-21	R.devices	Unified Handling of Graphics Devices
2018-07-21	rda	Shrunken Centroids Regularized Discriminant Analysis
2018-07-21	statnetWeb	A Graphical User Interface for Network Modeling with 'Statnet'
2018-07-21	wdman	'Webdriver'/'Selenium' Binary Manager
2018-07-20	BALCONY	Better ALignment CONsensus analYsis
2018-07-20	calibrateBinary	Calibration for Computer Experiments with Binary Responses
2018-07-20	caTools	Tools: moving window statistics, GIF, Base64, ROC AUC, etc
2018-07-20	FKF	Fast Kalman Filter
2018-07-20	foreign	Read Data Stored by 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka', 'dBase', ...
2018-07-20	forestControl	Approximate False Positive Rate Control in Selection Frequency for Random Forest
2018-07-20	fpc	Flexible Procedures for Clustering
2018-07-20	gam	Generalized Additive Models
2018-07-20	ggstance	Horizontal 'ggplot2' Components
2018-07-20	lazy	Lazy Learning for Local Regression
2018-07-20	lumberjack	Track Changes in Data
2018-07-20	MortalityGaps	The Double-Gap Life Expectancy Forecasting Model
2018-07-20	plotly	Create Interactive Web Graphics via 'plotly.js'
2018-07-20	POCRE	Penalized Orthogonal-Components Regression
2018-07-20	ppls	Penalized Partial Least Squares
2018-07-20	redland	RDF Library Bindings in R
2018-07-20	sampler	Sample Design, Drawing & Data Analysis Using Data Frames
2018-07-20	Seurat	Tools for Single Cell Genomics
2018-07-20	spind	Spatial Methods and Indices
2018-07-20	spm	Spatial Predictive Modeling
2018-07-20	spp	ChIP-Seq Processing Pipeline
2018-07-20	stringi	Character String Processing Facilities
2018-07-20	trimcluster	Cluster Analysis with Trimming
2018-07-19	ApacheLogProcessor	Process the Apache Web Server Log Files
2018-07-19	baytrends	Long Term Water Quality Trend Analysis
2018-07-19	BE	Bioequivalence Study Data Analysis
2018-07-19	blastula	Easily Send HTML Email Messages
2018-07-19	bor	Transforming Behavioral Observation Records into Data Matrices
2018-07-19	dbhydroR	'DBHYDRO' Hydrologic and Water Quality Data
2018-07-19	GWASinlps	Nonlocal Prior Based Iterative SNP Selection Tool for Genome-Wide Association Studies
2018-07-19	happytime	Two Games to Relieve the Boredom
2018-07-19	httpuv	HTTP and WebSocket Server Library
2018-07-19	HydeNet	Hybrid Bayesian Networks Using R and JAGS
2018-07-19	logistf	Firth's Bias-Reduced Logistic Regression
2018-07-19	mlmm.gwas	Pipeline for GWAS Using MLMM
2018-07-19	ncar	Noncompartmental Analysis for Pharmacokinetic Report
2018-07-19	NonCompart	Noncompartmental Analysis for Pharmacokinetic Data
2018-07-19	npsf	Nonparametric and Stochastic Efficiency and Productivity Analysis
2018-07-19	portes	Portmanteau Tests for Univariate and Multivariate Time. Series Models
2018-07-19	RcppParallel	Parallel Programming Tools for 'Rcpp'
2018-07-19	rredlist	'IUCN' Red List Client
2018-07-19	rwalkr	API to Melbourne Pedestrian Data
2018-07-19	sdmpredictors	Species Distribution Modelling Predictor Datasets
2018-07-19	serieslcb	Lower Confidence Bounds for Binomial Series System
2018-07-19	spacesRGB	Standard and User-Defined RGB Color Spaces, with Conversion Between RGB and CIE XYZ
2018-07-19	table1	Tables of Descriptive Statistics in HTML
2018-07-19	tkrplot	TK Rplot
2018-07-19	tmvmixnorm	Sampling from Truncated Multivariate Normal and t Distributions
2018-07-18	binhf	Haar-Fisz Functions for Binomial Data
2018-07-18	binman	A Binary Download Manager
2018-07-18	CASMAP	Detection of Statistically Significant Combinations of SNPs in Association Mapping
2018-07-18	CliftLRD	Complex-Valued Wavelet Lifting Estimators of the Hurst Exponent for Irregularly Sampled Time Series
2018-07-18	CNLTreg	Complex-Valued Wavelet Lifting for Signal Denoising
2018-07-18	CNLTtsa	Complex-Valued Wavelet Lifting for Univariate and Bivariate Time Series Analysis
2018-07-18	dynutils	Common Functionality for the 'dynverse' Packages
2018-07-18	evian	Evidential Analysis of Genetic Association Data
2018-07-18	future.batchtools	A Future API for Parallel and Distributed Processing using 'batchtools'
2018-07-18	future.callr	A Future API for Parallel Processing using 'callr'
2018-07-18	IntNMF	Integrative Clustering of Multiple Genomic Dataset
2018-07-18	liftLRD	Wavelet Lifting Estimators of the Hurst Exponent for Regularly and Irregularly Sampled Time Series
2018-07-18	LS2Wstat	A Multiscale Test of Spatial Stationarity for LS2W Processes
2018-07-18	qqplotr	Quantile-Quantile Plot Extensions for 'ggplot2'
2018-07-18	r4lineups	Statistical Inference on Lineup Fairness
2018-07-18	r511	Work with the Bay Area Transportation Commission Application Programming Interface
2018-07-18	rmpw	Causal Mediation Analysis Using Weighting Approach
2018-07-18	rNOMADS	An Interface to the NOAA Operational Model Archive and Distribution System
2018-07-18	robotstxt	A 'robots.txt' Parser and 'Webbot'/'Spider'/'Crawler' Permissions Checker
2018-07-18	SmoothWin	Soft Windowing on Linear Regression
2018-07-18	TangPoemR	Write Chinese Tang Poems
2018-07-18	tatest	Two-Group Ta-Test
2018-07-18	TaxicabCA	Taxicab Correspondence Analysis
2018-07-18	thor	Interface to 'LMDB'
2018-07-18	VCA	Variance Component Analysis
2018-07-17	abctools	Tools for ABC Analyses
2018-07-17	BioPET	Biomarker Prognostic Enrichment Tool
2018-07-17	Boruta	Wrapper Algorithm for All Relevant Feature Selection
2018-07-17	CATkit	Chronomics Analysis Toolkit (CAT): Periodicity Analysis
2018-07-17	catlearn	Formal Psychological Models of Categorization and Learning
2018-07-17	chemCal	Calibration Functions for Analytical Chemistry
2018-07-17	CodeDepends	Analysis of R Code for Reproducible Research and Code Comprehension
2018-07-17	dgo	Dynamic Estimation of Group-Level Opinion
2018-07-17	easyDes	An Easy Way to Descriptive Analysis
2018-07-17	extracat	Categorical Data Analysis and Visualization
2018-07-17	git2r	Provides Access to Git Repositories
2018-07-17	glue	Interpreted String Literals
2018-07-17	pinp	'pinp' is not 'PNAS'
2018-07-17	rcorpora	A Collection of Small Text Corpora of Interesting Data
2018-07-17	rmda	Risk Model Decision Analysis
2018-07-17	RRF	Regularized Random Forest
2018-07-17	RTransProb	Analyze and Forecast Credit Migrations
2018-07-17	scatterpie	Scatter Pie Plot
2018-07-17	SimDesign	Structure for Organizing Monte Carlo Simulation Designs
2018-07-17	spacetime	Classes and Methods for Spatio-Temporal Data
2018-07-16	Arothron	Geometric Morphometrics Analyses
2018-07-16	BayesianTools	General-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics
2018-07-16	DendroSync	A Set of Tools for Calculating Spatial Synchrony Between Tree-Ring Chronologies
2018-07-16	dmm	Dyadic Mixed Model for Pedigree Data
2018-07-16	GCalignR	Simple Peak Alignment for Gas-Chromatography Data
2018-07-16	ggpmisc	Miscellaneous Extensions to 'ggplot2'
2018-07-16	InterSIM	Simulation of Inter-Related Genomic Datasets
2018-07-16	keyring	Access the System Credential Store from R
2018-07-16	Mediana	Clinical Trial Simulations
2018-07-16	modeltools	Tools and Classes for Statistical Models
2018-07-16	MSwM	Fitting Markov Switching Models
2018-07-16	NHPoisson	Modelling and Validation of Non Homogeneous Poisson Processes
2018-07-16	ordinalForest	Ordinal Forests: Prediction and Variable Ranking with Ordinal Target Variables
2018-07-16	ordinalgmifs	Ordinal Regression for High-Dimensional Data
2018-07-16	PINSPlus	Clustering Algorithm for Data Integration and Disease Subtyping
2018-07-16	pixiedust	Tables so Beautifully Fine-Tuned You Will Believe It's Magic
2018-07-16	RANN	Fast Nearest Neighbour Search (Wraps ANN Library) Using L2 Metric
2018-07-16	rdmulti	Analysis of RD Designs with Multiple Cutoffs or Scores
2018-07-16	rFerns	Random Ferns Classifier
2018-07-16	Rsmlx	R Speaks 'Monolix'
2018-07-16	spacyr	Wrapper to the 'spaCy' 'NLP' Library
2018-07-16	SUMMER	Spatio-Temporal Under-Five Mortality Methods for Estimation
2018-07-16	vdmR	Visual Data Mining Tools
2018-07-16	WRTDStidal	Weighted Regression for Water Quality Evaluation in Tidal Waters
2018-07-15	benchr	High Precise Measurement of R Expressions Execution Time
2018-07-15	cowplot	Streamlined Plot Theme and Plot Annotations for 'ggplot2'
2018-07-15	EnvStats	Package for Environmental Statistics, Including US EPA Guidance
2018-07-15	gaston	Genetic Data Handling (QC, GRM, LD, PCA) & Linear Mixed Models
2018-07-15	GreedyExperimentalDesign	Greedy Experimental Design Construction
2018-07-15	GreedyExperimentalDesignJARs	GreedyExperimentalDesign JARs
2018-07-15	hypervolume	High Dimensional Geometry and Set Operations Using Kernel Density Estimation, Support Vector Machines, and Convex Hulls
2018-07-15	modules	Self Contained Units of Source Code
2018-07-15	RcppClassic	Deprecated 'classic' 'Rcpp' 'API'
2018-07-15	RCurl	General Network (HTTP/FTP/...) Client Interface for R
2018-07-15	sValues	Measures of the Sturdiness of Regression Coefficients
2018-07-15	tufte	Tufte's Styles for R Markdown Documents
2018-07-14	bayesAB	Fast Bayesian Methods for AB Testing
2018-07-14	BiodiversityR	Package for Community Ecology and Suitability Analysis
2018-07-14	gmp	Multiple Precision Arithmetic
2018-07-14	pillar	Coloured Formatting for Columns
2018-07-14	Rlinsolve	Iterative Solvers for (Sparse) Linear System of Equations
2018-07-14	SpaDES.tools	Additional Tools for Developing Spatially Explicit Discrete Event Simulation (SpaDES) Models
2018-07-14	splm	Econometric Models for Spatial Panel Data
2018-07-14	whitening	Whitening and High-Dimensional Canonical Correlation Analysis
2018-07-13	DTWUMI	Imputation of Multivariate Time Series Based on Dynamic Time Warping
2018-07-13	dynRB	Dynamic Range Boxes
2018-07-13	eha	Event History Analysis
2018-07-13	FRK	Fixed Rank Kriging
2018-07-13	geodist	Fast, Dependency-Free Geodesic Distance Calculations
2018-07-13	geostatsp	Geostatistical Modelling with Likelihood and Bayes
2018-07-13	gginnards	Explore the Innards of 'ggplot2' Objects
2018-07-13	glasso	Graphical Lasso: Estimation of Gaussian Graphical Models
2018-07-13	googlenlp	An Interface to Google's Cloud Natural Language API
2018-07-13	htree	Historical Tree Ensembles for Longitudinal Data
2018-07-13	incadata	Recognize and Handle Data in Formats Used by Swedish Cancer Centers
2018-07-13	iterators	Provides Iterator Construct for R
2018-07-13	joint.Cox	Penalized Likelihood Estimation and Dynamic Prediction under the Joint Frailty-Copula Models Between Tumour Progression and Death for Meta-Analysis
2018-07-13	nlaR	Interface to the National Lakes Assessment
2018-07-13	ofGEM	A Meta-Analysis Approach with Filtering for Identifying Gene-Level Gene-Environment Interactions with Genetic Association Data
2018-07-13	pgdraw	Generate Random Samples from the Polya-Gamma Distribution
2018-07-13	pompom	Person-Oriented Method and Perturbation on the Model
2018-07-13	Rlda	Bayesian LDA for Mixed-Membership Clustering Analysis
2018-07-13	RMark	R Code for Mark Analysis
2018-07-13	sgmodel	Solves a Generic Stochastic Growth Model with a Representative Agent
2018-07-12	CorShrink	Adaptive Shrinkage of Correlation and Covariance Matrices
2018-07-12	descomponer	Seasonal Adjustment by Frequency Analysis
2018-07-12	diseasemapping	Modelling Spatial Variation in Disease Risk for Areal Data
2018-07-12	dkanr	Client for the 'DKAN' API
2018-07-12	gambin	Fit the Gambin Model to Species Abundance Distributions
2018-07-12	gDefrag	Graph-Based Landscape De-Fragmentation
2018-07-12	gemlog	File Conversion for 'Gem Infrasound Logger'
2018-07-12	generalCorr	Generalized Correlations and Initial Causal Path
2018-07-12	irace	Iterated Racing for Automatic Algorithm Configuration
2018-07-12	JGR	Java GUI for R
2018-07-12	MAGNAMWAR	A Pipeline for Meta-Genome Wide Association
2018-07-12	multifluo	Dealing with Several Images of a Same Object Constituted of Different Zones
2018-07-12	optmatch	Functions for Optimal Matching
2018-07-12	penalized	L1 (Lasso and Fused Lasso) and L2 (Ridge) Penalized Estimation in GLMs and in the Cox Model
2018-07-12	qGaussian	The q-Gaussian Distribution
2018-07-12	RSSL	Implementations of Semi-Supervised Learning Approaches for Classification
2018-07-12	spass	Study Planning and Adaptation of Sample Size
2018-07-12	washeR	Time Series Outlier Detection
2018-07-12	xdcclarge	Estimating a (c)DCC-GARCH Model in Large Dimensions
2018-07-12	xwf	Extrema-Weighted Feature Extraction
2018-07-11	AdaptGauss	Gaussian Mixture Models (GMM)
2018-07-11	BCEA	Bayesian Cost Effectiveness Analysis
2018-07-11	bipartite	Visualising Bipartite Networks and Calculating Some (Ecological) Indices
2018-07-11	desctable	Produce Descriptive and Comparative Tables Easily
2018-07-11	DisImpact	Calculates Disproportionate Impact When Binary Success Data are Disaggregated by Subgroups
2018-07-11	distr	Object Oriented Implementation of Distributions
2018-07-11	dpmixsim	Dirichlet Process Mixture Model Simulation for Clustering and Image Segmentation
2018-07-11	DTWBI	Imputation of Time Series Based on Dynamic Time Warping
2018-07-11	dygraphs	Interface to 'Dygraphs' Interactive Time Series Charting Library
2018-07-11	erah	Automated Spectral Deconvolution, Alignment, and Metabolite Identification in GC/MS-Based Untargeted Metabolomics
2018-07-11	etm	Empirical Transition Matrix
2018-07-11	highriskzone	Determining and Evaluating High-Risk Zones
2018-07-11	llama	Leveraging Learning to Automatically Manage Algorithms
2018-07-11	nabor	Wraps 'libnabo', a Fast K Nearest Neighbour Library for Low Dimensions
2018-07-11	polyPK	The Pharmacokinetics (PK) of Multi-Component Drugs Using a Metabolomics Approach
2018-07-11	PrevMap	Geostatistical Modelling of Spatially Referenced Prevalence Data
2018-07-11	QCA	Qualitative Comparative Analysis
2018-07-11	randomizr	Easy-to-Use Tools for Common Forms of Random Assignment and Sampling
2018-07-11	spaero	Software for Project AERO
2018-07-11	startupmsg	Utilities for Start-Up Messages
2018-07-11	tauturri	Get Data Out of 'Tautulli' (Formerly 'PlexPy')
2018-07-11	tweet2r	Twitter Collector for R and Export to 'SQLite', 'postGIS' and 'GIS' Format
2018-07-11	xkcd	Plotting ggplot2 Graphics in an XKCD Style
2018-07-10	adlift	An Adaptive Lifting Scheme Algorithm
2018-07-10	augmentedRCBD	Analysis of Augmented Randomised Complete Block Designs
2018-07-10	banter	BioAcoustic EveNT ClassifiER
2018-07-10	bayesDP	Tools for the Bayesian Discount Prior Function
2018-07-10	cetcolor	CET Perceptually Uniform Colour Maps
2018-07-10	clustree	Visualise Clusterings at Different Resolutions
2018-07-10	CorrectOverloadedPeaks	Correct Overloaded Peaks from GC-APCI-MS Data
2018-07-10	countgmifs	Discrete Response Regression for High-Dimensional Data
2018-07-10	crul	HTTP Client
2018-07-10	foreSIGHT	Systems Insights from Generation of Hydroclimatic Timeseries
2018-07-10	FPCA3D	Three Dimensional Functional Component Analysis
2018-07-10	future.BatchJobs	A Future API for Parallel and Distributed Processing using BatchJobs
2018-07-10	imsig	Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours
2018-07-10	memor	A 'rmarkdown' Template that Can be Highly Customized
2018-07-10	MetaSubtract	Subtracting Summary Statistics of One or more Cohorts from Meta-GWAS Results
2018-07-10	mitml	Tools for Multiple Imputation in Multilevel Modeling
2018-07-10	netdep	Testing for Network Dependence
2018-07-10	nlt	A Nondecimated Lifting Transform for Signal Denoising
2018-07-10	paletteer	Comprehensive Collection of Color Palettes
2018-07-10	pdfsearch	Search Tools for PDF Files
2018-07-10	peakPantheR	Peak Picking and Annotation of High Resolution Experiments
2018-07-10	poisFErobust	Poisson Fixed Effects Robust
2018-07-10	qicharts2	Quality Improvement Charts
2018-07-10	RGeckoboard	R API for Geckoboard
2018-07-10	rt.test	Robustified t-Test
2018-07-10	SimCorMultRes	Simulates Correlated Multinomial Responses
2018-07-10	stablelearner	Stability Assessment of Statistical Learning Methods
2018-07-10	SubgrPlots	Graphical Displays for Subgroup Analysis in Clinical Trials
2018-07-10	syllabifyr	Syllabifier for CMU Dictionary Transcriptions
2018-07-10	TH.data	TH's Data Archive
2018-07-09	ARTool	Aligned Rank Transform
2018-07-09	CommonJavaJars	Useful Libraries for Building a Java Based GUI under R
2018-07-09	corrgram	Plot a Correlogram
2018-07-09	gMCP	Graph Based Multiple Comparison Procedures
2018-07-09	JuniperKernel	Kernel for 'Jupyter'
2018-07-09	Metrics	Evaluation Metrics for Machine Learning
2018-07-09	ML.MSBD	Maximum Likelihood Inference on Multi-State Trees
2018-07-09	multipanelfigure	Infrastructure to Assemble Multi-Panel Figures (from Grobs)
2018-07-09	pegas	Population and Evolutionary Genetics Analysis System
2018-07-09	pomp	Statistical Inference for Partially Observed Markov Processes
2018-07-09	rhoR	Rho for Inter Rater Reliability
2018-07-09	sidier	Substitution and Indel Distances to Infer Evolutionary Relationships
2018-07-09	spelling	Tools for Spell Checking in R
2018-07-09	wtss	An R Client for a Web Time-Series Service
2018-07-08	agRee	Various Methods for Measuring Agreement
2018-07-08	flatxml	Tools for Working with XML Files as R Dataframes
2018-07-08	phylopath	Perform Phylogenetic Path Analysis
2018-07-08	rdefra	Interact with the UK AIR Pollution Database from DEFRA
2018-07-08	sft	Functions for Systems Factorial Technology Analysis of Data
2018-07-08	tuneR	Analysis of Music and Speech
2018-07-08	WMWssp	Wilcoxon-Mann-Whitney Sample Size Planning
2018-07-07	betaboost	Boosting Beta Regression
2018-07-07	dbarts	Discrete Bayesian Additive Regression Trees Sampler
2018-07-07	ggforce	Accelerating 'ggplot2'
2018-07-07	ggraph	An Implementation of Grammar of Graphics for Graphs and Networks
2018-07-07	jeek	A Fast and Scalable Joint Estimator for Integrating Additional Knowledge in Learning Multiple Related Sparse Gaussian Graphical Models
2018-07-07	LCAextend	Latent Class Analysis (LCA) with Familial Dependence in Extended Pedigrees
2018-07-07	librarian	Install, Update, Load Packages from CRAN and 'GitHub' in One Step
2018-07-07	mgm	Estimating Time-Varying k-Order Mixed Graphical Models
2018-07-07	multinets	Multilevel Networks Analysis
2018-07-07	rfPermute	Estimate Permutation p-Values for Random Forest Importance Metrics
2018-07-07	rggobi	Interface Between R and 'GGobi'
2018-07-07	Rpoet	'PoetryDB' API Wrapper
2018-07-07	SQB	Sequential Bagging on Regression
2018-07-06	AcousticNDLCodeR	Coding Sound Files for Use with NDL
2018-07-06	agridat	Agricultural Datasets
2018-07-06	CoDiNA	Co-Expression Differential Network Analysis
2018-07-06	docxtools	Tools for R Markdown to Docx Documents
2018-07-06	ggfittext	Fit Text Inside a Box in 'ggplot2'
2018-07-06	heatmaply	Interactive Cluster Heat Maps Using 'plotly'
2018-07-06	HGNChelper	Identify and Correct Invalid HGNC Human Gene Symbols and MGI Mouse Gene Symbols
2018-07-06	MALDIquant	Quantitative Analysis of Mass Spectrometry Data
2018-07-06	mdatools	Multivariate Data Analysis for Chemometrics
2018-07-06	meaRtools	Micro-Electro Array (MEA) Analysis
2018-07-06	moderndive	Tidyverse-Friendly Introductory Linear Regression
2018-07-06	mousetrap	Process and Analyze Mouse-Tracking Data
2018-07-06	workflowr	A Framework for Reproducible and Collaborative Data Science
2018-07-05	alignfigR	Visualizing Multiple Sequence Alignments with 'ggplot2'
2018-07-05	aster	Aster Models
2018-07-05	bmixture	Bayesian Estimation for Finite Mixture of Distributions
2018-07-05	doex	One-Way Heteroscedastic ANOVA Tests
2018-07-05	ExtMallows	An Extended Mallows Model and Its Hierarchical Version for Ranked Data Aggregation
2018-07-05	fda	Functional Data Analysis
2018-07-05	gppm	Gaussian Process Panel Modeling
2018-07-05	IntegratedMRF	Integrated Prediction using Uni-Variate and Multivariate Random Forests
2018-07-05	mapsRinteractive	Local Adaptation and Evaluation of Digital Soil Maps
2018-07-05	mason	Build Data Structures for Common Statistical Analysis
2018-07-05	mineCitrus	Extract and Analyze Median Molecule Intensity from 'citrus' Output
2018-07-05	MMAC	Data for Mathematical Modeling and Applied Calculus
2018-07-05	nmixgof	Goodness of Fit Checks for Binomial N-Mixture Models
2018-07-05	packagefinder	Comfortable Search for R Packages on CRAN
2018-07-05	peRiodiCS	Functions for Generating Periodic Curves
2018-07-05	permDep	Permutation Tests for General Dependent Truncation
2018-07-05	puniform	Meta-Analysis Methods Correcting for Publication Bias
2018-07-05	rrd	Import Data from a RRD (Round Robin Database) File
2018-07-05	satscanMapper	'SaTScan' (TM) Results Mapper
2018-07-05	scRNAtools	Single Cell RNA Sequencing Data Analysis Tools
2018-07-05	survMisc	Miscellaneous Functions for Survival Data
2018-07-05	vosonSML	Tools for Collecting Social Media Data and Generating Networks for Analysis
2018-07-04	bigleaf	Physical and Physiological Ecosystem Properties from Eddy Covariance Data
2018-07-04	Data2LD	Functional Data Analysis with Linear Differential Equations
2018-07-04	EmiStatR	Emissions and Statistics in R for Wastewater and Pollutants in Combined Sewer Systems
2018-07-04	epitab	Flexible Contingency Tables for Epidemiology
2018-07-04	gghighlight	Highlight Lines and Points in 'ggplot2'
2018-07-04	kernelboot	Smoothed Bootstrap and Random Generation from Kernel Densities
2018-07-04	kmer	Fast K-Mer Counting and Clustering for Biological Sequence Analysis
2018-07-04	pointdensityP	Point Density for Geospatial Data
2018-07-04	RcppMeCab	'rcpp' Wrapper for 'mecab' Library
2018-07-04	Rrdrand	'DRNG' on Intel CPUs with the 'RdRand' Instruction for R
2018-07-04	SpatialVx	Spatial Forecast Verification
2018-07-04	swamp	Visualization, Analysis and Adjustment of High-Dimensional Data in Respect to Sample Annotations
2018-07-04	timeordered	Time-Ordered and Time-Aggregated Network Analyses
2018-07-04	varhandle	Functions for Robust Variable Handling
2018-07-04	wtest	The W-Test for Genetic Interactions Testing
2018-07-03	Blendstat	Joint Analysis of Experiments with Mixtures and Random Effects
2018-07-03	blockseg	Two Dimensional Change-Points Detection
2018-07-03	DatabionicSwarm	Swarm Intelligence for Self-Organized Clustering
2018-07-03	diffee	Fast and Scalable Learning of Sparse Changes in High-Dimensional Gaussian Graphical Model Structure
2018-07-03	estudy2	An Implementation of Parametric and Nonparametric Event Study
2018-07-03	GeneralizedUmatrix	Credible Visualization for Two-Dimensional Projections of Data
2018-07-03	ggedit	Interactive 'ggplot2' Layer and Theme Aesthetic Editor
2018-07-03	glmmTMB	Generalized Linear Mixed Models using Template Model Builder
2018-07-03	horizon	Horizon Search Algorithm
2018-07-03	MCMCglmm	MCMC Generalised Linear Mixed Models
2018-07-03	optiRum	Financial Functions & More
2018-07-03	pcadapt	Fast Principal Component Analysis for Outlier Detection
2018-07-03	petrinetR	Building, Visualizing, Exporting and Replaying Petri Nets
2018-07-03	processmapR	Construct Process Maps Using Event Data
2018-07-03	RSA	Response Surface Analysis
2018-07-03	rsyslog	Interface to the 'syslog' System Logger
2018-07-03	scholar	Analyse Citation Data from Google Scholar
2018-07-03	scraEP	Scrape European Parliament Careers
2018-07-03	spup	Spatial Uncertainty Propagation Analysis
2018-07-02	ACA	Abrupt Change-Point or Aberration Detection in Point Series
2018-07-02	adaptalint	Check Code Style Painlessly
2018-07-02	disco	Discordance and Concordance of Transcriptomic Responses
2018-07-02	drtmle	Doubly-Robust Nonparametric Estimation and Inference
2018-07-02	EDA	Energy Decomposition Analysis
2018-07-02	edeaR	Exploratory and Descriptive Event-Based Data Analysis
2018-07-02	expp	Spatial Analysis of Extra-Pair Paternity
2018-07-02	GD	Geographical Detectors
2018-07-02	ggraptR	Allows Interactive Visualization of Data Through a Web Browser GUI
2018-07-02	neatmaps	Heatmaps for Multiple Network Data
2018-07-02	pccc	Pediatric Complex Chronic Conditions
2018-07-02	rde	Reproducible Data Embedding
2018-07-02	robis	Ocean Biogeographic Information System (OBIS) Client
2018-07-02	simdistr	Assessment of Data Trial Distributions According to the Carlisle-Stouffer Method
2018-07-02	SimplifyStats	Simplifies Pairwise Statistical Analyses
2018-07-02	simule	A Constrained L1 Minimization Approach for Estimating Multiple Sparse Gaussian or Nonparanormal Graphical Models
2018-07-02	SpatialExtremes	Modelling Spatial Extremes
2018-07-02	STRMPS	Analysis of Short Tandem Repeat (STR) Massively Parallel Sequencing (MPS) Data
2018-07-02	tikzDevice	R Graphics Output in LaTeX Format
2018-07-02	TROM	Transcriptome Overlap Measure
2018-07-02	vqtl	Genome Scans to Accommodate and Target Genetic and Non-Genetic Effects on Trait Variance in Test Crosses
2018-07-01	BlockCov	Estimation of Large Block Covariance Matrices
2018-07-01	bupaR	Business Process Analysis in R
2018-07-01	CircStats	Circular Statistics, from "Topics in Circular Statistics" (2001)
2018-07-01	eChem	Simulations for Electrochemistry Experiments
2018-07-01	editrules	Parsing, Applying, and Manipulating Data Cleaning Rules
2018-07-01	frite	Functions Writing Functions
2018-07-01	ganalytics	Interact with 'Google Analytics'
2018-07-01	GenomicMating	Efficient Breeding by Genomic Mating
2018-07-01	ggrasp	Gaussian-Based Genome Representative Selector with Prioritization
2018-07-01	knnp	Time Series Prediction using K-Nearest Neighbors Algorithm (Parallel)
2018-07-01	mppR	Multi-Parent Population QTL Analysis
2018-07-01	NBLDA	Negative Binomial Linear Discriminant Analysis
2018-07-01	plde	Penalized Log-Density Estimation Using Legendre Polynomials
2018-07-01	PRISM.forecast	Penalized Regression with Inferred Seasonality Module - Forecasting Unemployment Initial Claims using 'Google Trends' Data
2018-07-01	randomsearch	Random Search for Expensive Functions
2018-07-01	searcher	Query Search Interfaces
2018-07-01	SimCorrMix	Simulation of Correlated Data with Multiple Variable Types Including Continuous and Count Mixture Distributions
2018-07-01	sitmo	Parallel Pseudo Random Number Generator (PPRNG) 'sitmo' Header Files
2018-07-01	spemd	A Bi-Dimensional Implementation of the Empirical Mode Decomposition for Spatial Data
2018-07-01	tippy	Add Tooltips to 'R markdown' Documents or 'Shiny' Apps
2018-07-01	tropicalSparse	Sparse Tropical Algebra
2018-06-30	BANEScarparkinglite	Working with Car Parking Data for Bath and North East Somerset
2018-06-30	biolink	Create Hyperlinks to Biological Databases and Resources
2018-06-30	expands	Expanding Ploidy and Allele-Frequency on Nested Subpopulations
2018-06-30	glmpathcr	Fit a Penalized Continuation Ratio Model for Predicting an Ordinal Response
2018-06-30	GuardianR	The Guardian API Wrapper
2018-06-30	interplot	Plot the Effects of Variables in Interaction Terms
2018-06-30	ISOcodes	Selected ISO Codes
2018-06-30	LaplacesDemon	Complete Environment for Bayesian Inference
2018-06-30	lmm	Linear Mixed Models
2018-06-30	mgcViz	Visualisations for Generalized Additive Models
2018-06-30	OECD	Search and Extract Data from the OECD
2018-06-30	rangeMapper	A Platform for the Study of Macro-Ecology of Life History Traits
2018-06-30	sealr	Sealing the R Objects Test and Assert Conditions
2018-06-30	svMisc	SciViews - Miscellaneous Functions
2018-06-30	tdthap	TDT Tests for Extended Haplotypes
2018-06-30	TSA	Time Series Analysis
2018-06-30	Unicode	Unicode Data and Utilities
2018-06-29	audio	Audio Interface for R
2018-06-29	bayesboot	An Implementation of Rubin's (1981) Bayesian Bootstrap
2018-06-29	Brq	Bayesian Analysis of Quantile Regression Models
2018-06-29	chillR	Statistical Methods for Phenology Analysis in Temperate Fruit Trees
2018-06-29	crplyr	A 'dplyr' Interface for Crunch
2018-06-29	expint	Exponential Integral and Incomplete Gamma Function
2018-06-29	flexdashboard	R Markdown Format for Flexible Dashboards
2018-06-29	googlesheets	Manage Google Spreadsheets from R
2018-06-29	groupedSurv	Efficient Estimation of Grouped Survival Models Using the Exact Likelihood Function
2018-06-29	ifaTools	Toolkit for Item Factor Analysis with 'OpenMx'
2018-06-29	learnr	Interactive Tutorials for R
2018-06-29	mfe	Meta-Feature Extractor
2018-06-29	multicmp	Flexible Modeling of Multivariate Count Data via the Multivariate Conway-Maxwell-Poisson Distribution
2018-06-29	nlcv	Nested Loop Cross Validation
2018-06-29	pan	Multiple Imputation for Multivariate Panel or Clustered Data
2018-06-29	pool	Object Pooling
2018-06-29	Rttf2pt1	'ttf2pt1' Program
2018-06-29	SCORPIUS	Inferring Developmental Chronologies from Single-Cell RNA Sequencing Data
2018-06-29	support.BWS2	Basic Functions for Supporting an Implementation of Case 2 Best-Worst Scaling
2018-06-29	svrpath	The SVR Path Algorithm
2018-06-29	taxlist	Handling Taxonomic Lists
2018-06-29	vegtable	Handling Vegetation Data Sets
2018-06-29	zooimage	Analysis of Numerical Plankton Images
2018-06-28	cld3	Google's Compact Language Detector 3
2018-06-28	dataone	R Interface to the DataONE REST API
2018-06-28	dynOmics	Fast Fourier Transform to Identify Associations Between Time Course Omics Data
2018-06-28	gistr	Work with 'GitHub' 'Gists'
2018-06-28	hyperSpec	Work with Hyperspectral Data, i.e. Spectra + Meta Information (Spatial, Time, Concentration, ...)
2018-06-28	INDperform	Evaluation of Indicator Performances for Assessing Ecosystem States
2018-06-28	prioritizr	Systematic Conservation Prioritization in R
2018-06-28	ropercenter	Reproducible Data Retrieval from the Roper Center Data Archive
2018-06-28	SimMultiCorrData	Simulation of Correlated Data with Multiple Variable Types
2018-06-28	skynet	Generates Networks from BTS Data
2018-06-28	svIDE	Functions to Ease Interactions Between R and IDE or Code Editors
2018-06-28	svTools	Wrappers for Tools in Other Packages for IDE Friendliness
2018-06-28	svWidgets	Management of GUI Widgets, Windows, and Other GUI Resources
2018-06-27	abcrf	Approximate Bayesian Computation via Random Forests
2018-06-27	AdaSampling	Adaptive Sampling for Positive Unlabeled and Label Noise Learning
2018-06-27	biomartr	Genomic Data Retrieval
2018-06-27	BTdecayLasso	Bradley-Terry Model with Exponential Time Decayed Log-Likelihood and Adaptive Lasso
2018-06-27	cbinom	Continuous Analog of a Binomial Distribution
2018-06-27	clogitLasso	Sparse Conditional Logistic Regression for Matched Studies
2018-06-27	colordistance	Distance Metrics for Image Color Similarity
2018-06-27	CytobankAPIstats	Computes Signaling and Population Stats for Cytometry Data on Cytobank using 'CytobankAPI'
2018-06-27	dineq	Decomposition of (Income) Inequality
2018-06-27	dng	Distributions and Gradients
2018-06-27	dotwhisker	Dot-and-Whisker Plots of Regression Results
2018-06-27	dsm	Density Surface Modelling of Distance Sampling Data
2018-06-27	DSsim	Distance Sampling Simulations
2018-06-27	ecospat	Spatial Ecology Miscellaneous Methods
2018-06-27	GBJ	Generalized Berk-Jones Test for Set-Based Inference in Genetic Association Studies
2018-06-27	mmap	Map Pages of Memory
2018-06-27	mrds	Mark-Recapture Distance Sampling
2018-06-27	NITPicker	Finds the Best Subset of Points to Sample
2018-06-27	nsRFA	Non-Supervised Regional Frequency Analysis
2018-06-27	NutrienTrackeR	Food Composition Information and Dietary Assessment
2018-06-27	phyloseqGraphTest	Graph-Based Permutation Tests for Microbiome Data
2018-06-27	preseqR	Predicting Species Accumulation Curves
2018-06-27	readbitmap	Simple Unified Interface to Read Bitmap Images (BMP,JPEG,PNG,TIFF)
2018-06-27	RKEELjars	Java Executable .jar Files for 'RKEEL'
2018-06-27	SWMPrExtension	Additional Functions for Retrieving, Organizing, and Analyzing Estuary Monitoring Data
2018-06-27	TUWmodel	Lumped Hydrological Model for Education Purposes
2018-06-27	VGAMextra	Additions and Extensions of the 'VGAM' Package
2018-06-26	backpipe	Backward Pipe (Right-to-Left) Operator
2018-06-26	ClusterBootstrap	Analyze Clustered Data with Generalized Linear Models using the Cluster Bootstrap
2018-06-26	elastic	General Purpose Interface to 'Elasticsearch'
2018-06-26	epanetReader	Read Epanet Files into R
2018-06-26	fancycut	A Fancy Version of 'base::cut'
2018-06-26	fetchR	Calculate Wind Fetch
2018-06-26	gtools	Various R Programming Tools
2018-06-26	jpmesh	Utilities for Japanese Mesh Code
2018-06-26	multiROC	Calculating and Visualizing ROC and PR Curves Across Multi-Class Classifications
2018-06-26	NMOF	Numerical Methods and Optimization in Finance
2018-06-26	nycflights13	Flights that Departed NYC in 2013
2018-06-26	otvPlots	Over Time Variable Plots
2018-06-26	padr	Quickly Get Datetime Data Ready for Analysis
2018-06-26	protolite	Fast and Simple Object Serialization to Protocol Buffers
2018-06-26	qrnn	Quantile Regression Neural Network
2018-06-26	RcmdrPlugin.lfstat	'Rcmdr' Plug-in for Low Flow Analysis
2018-06-26	sbpiper	Data Analysis Functions for 'SBpipe' Package
2018-06-26	schoenberg	Tools for 12-Tone Musical Composition
2018-06-26	tableMatrix	Combines 'data.table' and 'matrix' Classes
2018-06-26	treeDA	Tree-Based Discriminant Analysis
2018-06-26	TropFishR	Tropical Fisheries Analysis
2018-06-26	unpivotr	Unpivot Complex and Irregular Data Layouts
2018-06-26	voxel	Mass-Univariate Voxelwise Analysis of Medical Imaging Data
2018-06-25	autoshiny	Automatic Transformation of an 'R' Function into a 'shiny' App
2018-06-25	bizdays	Business Days Calculations and Utilities
2018-06-25	catcont	Test, Identify, Select and Mutate Categorical or Continuous Values
2018-06-25	cellWise	Analyzing Data with Cellwise Outliers
2018-06-25	gmodels	Various R Programming Tools for Model Fitting
2018-06-25	missMDA	Handling Missing Values with Multivariate Data Analysis
2018-06-25	mlf	Machine Learning Foundations
2018-06-25	na.tools	Comprehensive Library for Working with Missing (NA) Values in Vectors
2018-06-25	ParamHelpers	Helpers for Parameters in Black-Box Optimization, Tuning and Machine Learning
2018-06-25	phylogram	Dendrograms for Evolutionary Analysis
2018-06-25	platetools	Tools and Plots for Multi-Well Plates
2018-06-25	readroper	Simply Read ASCII Single and Multicard Polling Datasets
2018-06-25	RobustAFT	Truncated Maximum Likelihood Fit and Robust Accelerated Failure Time Regression for Gaussian and Log-Weibull Case
2018-06-25	rrepast	Invoke 'Repast Simphony' Simulation Models
2018-06-24	cofeatureR	Generate Cofeature Matrices
2018-06-24	coreCT	Programmatic Analysis of Sediment Cores Using Computed Tomography Imaging
2018-06-24	DDPGPSurv	DDP-GP Survival Analysis
2018-06-24	EcoGenetics	Management and Exploratory Analysis of Spatial Data in Landscape Genetics
2018-06-24	GSAfisherCombined	Gene Set Analysis with Fisher Combined Method
2018-06-24	ICEinfer	Incremental Cost-Effectiveness Inference using Two Unbiased Samples
2018-06-24	lutz	Look Up Time Zones of Point Coordinates
2018-06-24	mosaicCore	Common Utilities for Other MOSAIC-Family Packages
2018-06-24	MuChPoint	Multiple Change Point
2018-06-24	nat.templatebrains	NeuroAnatomy Toolbox ('nat') Extension for Handling Template Brains
2018-06-24	patternplot	Versatile Pie Charts, Bar Charts and Box Plots using Patterns, Colors and Images
2018-06-24	RGreenplum	Interface to 'Greenplum' Database
2018-06-24	RIA	Radiomics Image Analysis Toolbox for Medial Images
2018-06-24	SpatioTemporal	Spatio-Temporal Model Estimation
2018-06-24	splot	Split Plot
2018-06-24	subrank	Computes Copula using Ranks and Subsampling
2018-06-24	vsgoftest	Goodness-of-Fit Tests Based on Kullback-Leibler Divergence
2018-06-23	clipr	Read and Write from the System Clipboard
2018-06-23	GMDH2	Binary Classification via GMDH-Type Neural Network Algorithms
2018-06-23	mosaicData	Project MOSAIC Data Sets
2018-06-23	MPTinR	Analyze Multinomial Processing Tree Models
2018-06-23	plotROC	Generate Useful ROC Curve Charts for Print and Interactive Use
2018-06-23	schumaker	Schumaker Shape-Preserving Spline
2018-06-23	zeitgebr	Analysis of Circadian Behaviours
2018-06-22	alr3	Data to Accompany Applied Linear Regression 3rd Edition
2018-06-22	bisoreg	Bayesian Isotonic Regression with Bernstein Polynomials
2018-06-22	CopulaREMADA	Copula Mixed Effect Models for Multivariate Meta-Analysis of Diagnostic Test Accuracy Studies
2018-06-22	doRNG	Generic Reproducible Parallel Backend for 'foreach' Loops
2018-06-22	hexSticker	Create Hexagon Sticker in R
2018-06-22	lcmm	Extended Mixed Models Using Latent Classes and Latent Processes
2018-06-22	mcmcplots	Create Plots from MCMC Output
2018-06-22	mombf	Moment and Inverse Moment Bayes Factors
2018-06-22	mosum	Moving Sum Based Procedures for Changes in the Mean
2018-06-22	protViz	Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics
2018-06-22	RcmdrPlugin.temis	Graphical Integrated Text Mining Solution
2018-06-22	robcbi	Conditionally Unbiased Bounded Influence Estimates
2018-06-22	RStoolbox	Tools for Remote Sensing Data Analysis
2018-06-22	s20x	Functions for University of Auckland Course STATS 201/208 Data Analysis
2018-06-22	statnet.common	Common R Scripts and Utilities Used by the Statnet Project Software
2018-06-22	subscreen	Systematic Screening of Study Data for Subgroup Effects
2018-06-21	BUCSS	Bias and Uncertainty Corrected Sample Size
2018-06-21	fastDummies	Fast Creation of Dummy (Binary) Columns and Rows from Categorical Variables
2018-06-21	forecast	Forecasting Functions for Time Series and Linear Models
2018-06-21	gnm	Generalized Nonlinear Models
2018-06-21	googleLanguageR	Call Google's 'Natural Language' API, 'Cloud Translation' API, 'Cloud Speech' API and 'Cloud Text-to-Speech' API
2018-06-21	iilasso	Independently Interpretable Lasso
2018-06-21	LEGIT	Latent Environmental & Genetic InTeraction (LEGIT) Model
2018-06-21	mlrMBO	Bayesian Optimization and Model-Based Optimization of Expensive Black-Box Functions
2018-06-21	qrng	(Randomized) Quasi-Random Number Generators
2018-06-21	Rmixmod	Classification with Mixture Modelling
2018-06-21	rnn	Recurrent Neural Network
2018-06-21	sigmoid	Sigmoid Functions for Machine Learning
2018-06-21	SimilaR	R Source Code Similarity Evaluation
2018-06-21	staRdom	PARAFAC Analysis of EEMs from DOM
2018-06-21	thinkr	Tools for Cleaning Up Messy Files
2018-06-21	tidyxl	Read Untidy Excel Files
2018-06-21	TSPred	Functions for Benchmarking Time Series Prediction
2018-06-20	anipaths	Animation of Observed Trajectories Using Spline-Based Interpolation
2018-06-20	emojifont	Emoji and Font Awesome in Graphics
2018-06-20	imputeTS	Time Series Missing Value Imputation
2018-06-20	mortAAR	Analysis of Archaeological Mortality Data
2018-06-20	randomizeBE	Create a Random List for Crossover Studies
2018-06-20	rsimsum	Analysis of Simulation Studies Including Monte Carlo Error
2018-06-20	SDLfilter	Filtering Satellite-Derived Locations
2018-06-20	vertexenum	Vertex Enumeration of Polytopes
2018-06-19	adwordsR	Access the 'Google Adwords' API
2018-06-19	careless	Procedures for Computing Indices of Careless Responding
2018-06-19	centralplot	Show the Strength of Relationships Between Centre and Peripheral Items
2018-06-19	chinese.misc	Miscellaneous Tools for Chinese Text Mining and More
2018-06-19	convey	Income Concentration Analysis with Complex Survey Samples
2018-06-19	cstab	Selection of Number of Clusters via Normalized Clustering Instability
2018-06-19	derivmkts	Functions and R Code to Accompany Derivatives Markets
2018-06-19	DPtree	Dirichlet-Based Polya Tree
2018-06-19	groupICA	Independent Component Analysis for Grouped Data
2018-06-19	GWSDAT	GroundWater Spatiotemporal Data Analysis Tool (GWSDAT)
2018-06-19	M2SMF	Multi-Modal Similarity Matrix Factorization for Integrative Multi-Omics Data Analysis
2018-06-19	Mcomp	Data from the M-Competitions
2018-06-19	otuSummary	Summarizing OTU Table Regarding the Composition, Abundance and Beta Diversity of Abundant and Rare Biospheres
2018-06-19	prodest	Production Function Estimation
2018-06-19	PRROC	Precision-Recall and ROC Curves for Weighted and Unweighted Data
2018-06-19	rdiversity	Measurement and Partitioning of Similarity-Sensitive Biodiversity
2018-06-19	recommenderlab	Lab for Developing and Testing Recommender Algorithms
2018-06-19	RepoGenerator	Generates a Project and Repo for Easy Initialization of a Workshop
2018-06-19	RItools	Randomization Inference Tools
2018-06-19	ROI.plugin.neos	'NEOS' Plug-in for the 'R' Optimization Interface
2018-06-19	sitar	Super Imposition by Translation and Rotation Growth Curve Analysis
2018-06-19	spam	SPArse Matrix
2018-06-19	spam64	64-Bit Extension of the SPArse Matrix R Package 'spam'
2018-06-19	uptasticsearch	Get Data Frame Representations of 'Elasticsearch' Results
2018-06-18	ahnr	An Implementation of the Artificial Hydrocarbon Networks
2018-06-18	asciiSetupReader	Reads 'SPSS' and 'SAS' Files from ASCII Data Files (.txt) and Setup Files (.sps or .sas)
2018-06-18	bayeslm	Efficient Sampling for Gaussian Linear Regression with Arbitrary Priors
2018-06-18	causalsens	Selection Bias Approach to Sensitivity Analysis for Causal Effects
2018-06-18	choiceDes	Design Functions for Choice Studies
2018-06-18	CircularDDM	Circular Drift-Diffusion Model
2018-06-18	designmatch	Matched Samples that are Balanced and Representative by Design
2018-06-18	dragonking	Statistical Tools to Identify Dragon Kings
2018-06-18	gamclass	Functions and Data for a Course on Modern Regression and Classification
2018-06-18	geeM	Solve Generalized Estimating Equations
2018-06-18	geoops	'GeoJSON' Topology Calculations and Operations
2018-06-18	grImport	Importing Vector Graphics
2018-06-18	growthrates	Estimate Growth Rates from Experimental Data
2018-06-18	IAPWS95	Thermophysical Properties of Water and Steam
2018-06-18	mdsr	Complement to 'Modern Data Science with R'
2018-06-18	Mega2R	Accessing and Processing a 'Mega2' Genetic Database
2018-06-18	MetaComp	EDGE Taxonomy Assignments Visualization
2018-06-18	mixdir	Cluster High Dimensional Categorical Datasets
2018-06-18	NNLM	Fast and Versatile Non-Negative Matrix Factorization
2018-06-18	rdryad	Access for Dryad Web Services
2018-06-18	rENA	Epistemic Network Analysis
2018-06-18	rlfsm	Simulations and Statistical Inference for Linear Fractional Stable Motions
2018-06-18	RLumShiny	'Shiny' Applications for the R Package 'Luminescence'
2018-06-18	tsbox	Class-Agnostic Time Series
2018-06-17	belg	Boltzmann Entropy of a Landscape Gradient
2018-06-17	CBPS	Covariate Balancing Propensity Score
2018-06-17	dplyr.teradata	A 'Teradata' Backend for 'dplyr'
2018-06-17	dragulaR	Drag and Drop Elements in 'Shiny' using 'Dragula Javascript Library'
2018-06-17	exuber	Econometric Analysis of Explosive Time Series
2018-06-17	fuser	Fused Lasso for High-Dimensional Regression over Groups
2018-06-17	iplots	iPlots - interactive graphics for R
2018-06-17	jrvFinance	Basic Finance; NPV/IRR/Annuities/Bond-Pricing; Black Scholes
2018-06-17	optparse	Command Line Option Parser
2018-06-17	refinr	Cluster and Merge Similar Values Within a Character Vector
2018-06-17	rgdax	Wrapper for 'GDAX' Cryptocurrency Exchange
2018-06-17	spatialwarnings	Spatial Early Warning Signals of Ecosystem Degradation
2018-06-17	statprograms	Graduate Statistics Program Datasets
2018-06-17	walrus	Robust Statistical Methods
2018-06-16	graphicalVAR	Graphical VAR for Experience Sampling Data
2018-06-16	isni	Index of Local Sensitivity to Nonignorability
2018-06-16	sads	Maximum Likelihood Models for Species Abundance Distributions
2018-06-16	supernova	Judd & McClelland Formatting for ANOVA Output
2018-06-15	alphastable	Inference for Stable Distribution
2018-06-15	Bchron	Radiocarbon Dating, Age-Depth Modelling, Relative Sea Level Rate Estimation, and Non-Parametric Phase Modelling
2018-06-15	bsamGP	Bayesian Spectral Analysis Models using Gaussian Process Priors
2018-06-15	distfree.cr	Distribution-Free Confidence Region
2018-06-15	gamboostLSS	Boosting Methods for 'GAMLSS'
2018-06-15	glinternet	Learning Interactions via Hierarchical Group-Lasso Regularization
2018-06-15	hddplot	Use Known Groups in High-Dimensional Data to Derive Scores for Plots
2018-06-15	hybridModels	Stochastic Hybrid Models in Dynamic Networks
2018-06-15	IntervalSurgeon	Operating on Integer-Bounded Intervals
2018-06-15	kvh	Read/Write Files in Key-Value-Hierarchy Format
2018-06-15	loder	Dependency-Free Access to PNG Image Files
2018-06-15	mcen	Multivariate Cluster Elastic Net
2018-06-15	mmtfa	Model-Based Clustering and Classification with Mixtures of Modified t Factor Analyzers
2018-06-15	MultisiteMediation	Causal Mediation Analysis in Multisite Trials
2018-06-15	MVar	Multivariate Analysis
2018-06-15	Orcs	Omnidirectional R Code Snippets
2018-06-15	PPQplan	Process Performance Qualification (PPQ) Plans in Chemistry, Manufacturing and Controls (CMC) Statistical Analysis
2018-06-15	prophet	Automatic Forecasting Procedure
2018-06-15	QTL.gCIMapping.GUI	QTL Genome-Wide Composite Interval Mapping with Graphical User Interface
2018-06-15	randomizeR	Randomization for Clinical Trials
2018-06-15	RcppEigenAD	Compiles 'C++' Code using 'Rcpp', 'Eigen' and 'CppAD' to Produce First and Second Order Partial Derivatives
2018-06-15	segregation	Entropy-Based Segregation Indices
2018-06-15	simIReff	Stochastic Simulation for Information Retrieval Evaluation: Effectiveness Scores
2018-06-15	SLIDE	Single Cell Linkage by Distance Estimation is SLIDE
2018-06-15	SpaDES	Develop and Run Spatially Explicit Discrete Event Simulation Models
2018-06-15	sssc	Same Species Sample Contamination Detection
2018-06-15	WRS2	A Collection of Robust Statistical Methods
2018-06-14	breakDown	Model Agnostic Explainers for Individual Predictions
2018-06-14	CGPfunctions	Powell Miscellaneous Functions for Teaching and Learning Statistics
2018-06-14	compositions	Compositional Data Analysis
2018-06-14	corTest	Robust Tests for Equal Correlation
2018-06-14	eseis	Environmental Seismology Toolbox
2018-06-14	genesysr	Genesys PGR Client
2018-06-14	GFORCE	Clustering and Inference Procedures for High-Dimensional Latent Variable Models
2018-06-14	ggfan	Summarise a Distribution Through Coloured Intervals
2018-06-14	IPCAPS	Iterative Pruning to Capture Population Structure
2018-06-14	jaccard	Test Similarity Between Binary Data using Jaccard/Tanimoto Coefficients
2018-06-14	jpndistrict	Create Japanese Administration Area and Office Maps
2018-06-14	liger	Lightweight Iterative Geneset Enrichment
2018-06-14	lingtypology	Linguistic Typology and Mapping
2018-06-14	LogicReg	Logic Regression
2018-06-14	logspline	Routines for Logspline Density Estimation
2018-06-14	lue	Light Use Efficiency Model to Estimate Biomass and YIELD with and Without Vapour Pressure Deficit
2018-06-14	mixor	Mixed-Effects Ordinal Regression Analysis
2018-06-14	MODISTools	Interface to the 'MODIS Land Products Subsets' Web Services
2018-06-14	morpheus	Estimate Parameters of Mixtures of Logistic Regressions
2018-06-14	MVN	Multivariate Normality Tests
2018-06-14	nparMD	Nonparametric Analysis of Multivariate Data in Factorial Designs
2018-06-14	polspline	Polynomial Spline Routines
2018-06-14	progress	Terminal Progress Bars
2018-06-14	qpcR	Modelling and Analysis of Real-Time PCR Data
2018-06-14	rgam	Robust Generalized Additive Model
2018-06-14	smacof	Multidimensional Scaling
2018-06-14	splines2	Regression Spline Functions and Classes
2018-06-14	stockR	Identifying Stocks in Genetic Data
2018-06-14	TPD	Methods for Measuring Functional Diversity Based on Trait Probability Density
2018-06-14	tree.bins	Recategorization of Factor Variables by Decision Tree Leaves
2018-06-14	TrendInTrend	Odds Ratio Estimation and Power Calculation for the Trend in Trend Model
2018-06-14	tuckerR.mmgg	Three-Mode Principal Components Analysis
2018-06-14	varjmcm	Estimations for the Covariance of Estimated Parameters in Joint Mean-Covariance Models
2018-06-14	wnl	Minimization Tool for Pharmacokinetic-Pharmacodynamic Data Analysis
2018-06-13	bshazard	Nonparametric Smoothing of the Hazard Function
2018-06-13	cna	Causal Modeling with Coincidence Analysis
2018-06-13	CsChange	Testing for Change in C-Statistic
2018-06-13	dlm	Bayesian and Likelihood Analysis of Dynamic Linear Models
2018-06-13	driftR	Drift Correcting Water Quality Data
2018-06-13	IATanalytics	Compute Effect Sizes and Reliability for Implicit Association Test (IAT) Data
2018-06-13	iTOP	Inferring the Topology of Omics Data
2018-06-13	MVar.pt	Analise multivariada (brazilian portuguese)
2018-06-13	PAS	Polygenic Analysis System (PAS)
2018-06-13	PKNCA	Perform Pharmacokinetic Non-Compartmental Analysis
2018-06-13	ROpenDota	Access OpenDota Services in R
2018-06-13	sae	Small Area Estimation
2018-06-13	sensitivitymv	Sensitivity Analysis in Observational Studies
2018-06-13	spsurvey	Spatial Survey Design and Analysis
2018-06-12	aplpack	Another Plot Package: 'Bagplots', 'Iconplots', 'Summaryplots', Slider Functions and Others
2018-06-12	beginr	Functions for R Beginners
2018-06-12	cairoDevice	Embeddable Cairo Graphics Device Driver
2018-06-12	CaseBasedReasoning	Case-Based Reasoning
2018-06-12	CGP	Composite Gaussian Process Models
2018-06-12	codyn	Community Dynamics Metrics
2018-06-12	fpCompare	Reliable Comparison of Floating Point Numbers
2018-06-12	ggseas	'stats' for Seasonal Adjustment on the Fly with 'ggplot2'
2018-06-12	hett	Heteroscedastic t-Regression
2018-06-12	hydroPSO	Particle Swarm Optimisation, with Focus on Environmental Models
2018-06-12	IDSpatialStats	Estimate Global Clustering in Infectious Disease
2018-06-12	iRepro	Reproducibility for Interval-Censored Data
2018-06-12	lestat	A Package for Learning Statistics
2018-06-12	linpk	Generate Concentration-Time Profiles from Linear PK Systems
2018-06-12	lpridge	Local Polynomial (Ridge) Regression
2018-06-12	MLZ	Mean Length-Based Estimators of Mortality using TMB
2018-06-12	munsell	Utilities for Using Munsell Colours
2018-06-12	NetRep	Permutation Testing Network Module Preservation Across Datasets
2018-06-12	norris	All of Your Chuck Norris Needs
2018-06-12	pxweb	R Interface to the PX-Web/PC-Axis API
2018-06-12	quickpsy	Fits Psychometric Functions for Multiple Groups
2018-06-12	RGtk2	R Bindings for Gtk 2.8.0 and Above
2018-06-12	rstiefel	Random Orthonormal Matrix Generation and Optimization on the Stiefel Manifold
2018-06-12	spectralAnalysis	Pre-Process, Visualize and Analyse Process Analytical Data, by Spectral Data Measurements Made During a Chemical Process
2018-06-12	tightClust	Tight Clustering
2018-06-12	tuts	Time Uncertain Time Series Analysis
2018-06-12	wdm	Weighted Dependence Measures
2018-06-11	bpca	Biplot of Multivariate Data Based on Principal Components Analysis
2018-06-11	CALIBERrfimpute	Multiple Imputation Using MICE and Random Forest
2018-06-11	Deriv	Symbolic Differentiation
2018-06-11	diceR	Diverse Cluster Ensemble in R
2018-06-11	extRemes	Extreme Value Analysis
2018-06-11	gamlss.cens	Fitting an Interval Response Variable Using ‘gamlss.family’ Distributions
2018-06-11	imageData	Aids in Processing and Plotting Data from a Lemna-Tec Scananalyzer
2018-06-11	jwutil	Tools for Data Manipulation and Testing
2018-06-11	leaflet.minicharts	Mini Charts for Interactive Maps
2018-06-11	manipulateWidget	Add Even More Interactivity to Interactive Charts
2018-06-11	ompr	Model and Solve Mixed Integer Linear Programs
2018-06-11	ompr.roi	A Solver for 'ompr' that Uses the R Optimization Infrastructure ('ROI')
2018-06-11	PlasmaMutationDetector	Tumor Mutation Detection in Plasma
2018-06-11	plsRglm	Partial Least Squares Regression for Generalized Linear Models
2018-06-11	PPforest	Projection Pursuit Classification Forest
2018-06-11	RAdwords	Loading Google Adwords Data into R
2018-06-11	rclimateca	Fetch Climate Data from Environment Canada
2018-06-11	xlsx	Read, Write, Format Excel 2007 and Excel 97/2000/XP/2003 Files
2018-06-10	antitrust	Tools for Antitrust Practitioners
2018-06-10	AROC	Covariate-Adjusted Receiver Operating Characteristic Curve Inference
2018-06-10	cheddar	Analysis and Visualisation of Ecological Communities
2018-06-10	CMLS	Constrained Multivariate Least Squares
2018-06-10	cplm	Compound Poisson Linear Models
2018-06-10	eNetXplorer	Quantitative Exploration of Elastic Net Families for Generalized Linear Models
2018-06-10	FILEST	Fine-Level Structure Simulator
2018-06-10	freeknotsplines	Algorithms for Implementing Free-Knot Splines
2018-06-10	GetoptLong	Parsing Command-Line Arguments and Variable Interpolation
2018-06-10	humidity	Calculate Water Vapor Measures from Temperature and Dew Point
2018-06-10	inplace	In-place Operators for R
2018-06-10	multiway	Component Models for Multi-Way Data
2018-06-10	mvMISE	A General Framework of Multivariate Mixed-Effects Selection Models
2018-06-10	RcppGSL	'Rcpp' Integration for 'GNU GSL' Vectors and Matrices
2018-06-10	RcppZiggurat	'Rcpp' Integration of Different "Ziggurat" Normal RNG Implementations
2018-06-10	rvg	R Graphics Devices for Vector Graphics Output
2018-06-10	StatCharrms	Statistical Analysis of Chemistry, Histopathology, and Reproduction Endpoints Including Repeated Measures and Multi-Generation Studies
2018-06-10	teachingApps	Apps for Teaching Statistics, R Programming, and Shiny App Development
2018-06-10	trade	Tools for Trade Practitioners
2018-06-09	biclust	BiCluster Algorithms
2018-06-09	GlobalOptions	Generate Functions to Get or Set Global Options
2018-06-09	HDInterval	Highest (Posterior) Density Intervals
2018-06-09	highr	Syntax Highlighting for R Source Code
2018-06-09	Libra	Linearized Bregman Algorithms for Generalized Linear Models
2018-06-09	odbc	Connect to ODBC Compatible Databases (using the DBI Interface)
2018-06-09	railtrails	Data for Trails in the United States from the Rails-to-Trails Conservancy
2018-06-09	RcppDE	Global Optimization by Differential Evolution in C++
2018-06-09	xgboost	Extreme Gradient Boosting
2018-06-08	bigQueryR	Interface with Google BigQuery with Shiny Compatibility
2018-06-08	bivrp	Bivariate Residual Plots with Simulation Polygons
2018-06-08	blackbox	Black Box Optimization and Exploration of Parameter Space
2018-06-08	boxplotdbl	Double Box Plot for Two-Axes Correlation
2018-06-08	CompRandFld	Composite-Likelihood Based Analysis of Random Fields
2018-06-08	diaplt	Beads Summary Plot of Ranges
2018-06-08	dqrng	Fast Pseudo Random Number Generators
2018-06-08	elliplot	Ellipse Summary Plot of Quantiles
2018-06-08	fitDRC	Fitting Density Ratio Classes
2018-06-08	gap	Genetic Analysis Package
2018-06-08	LSAmitR	Daten, Beispiele und Funktionen zu 'Large-Scale Assessment mit R'
2018-06-08	MOCCA	Multi-Objective Optimization for Collecting Cluster Alternatives
2018-06-08	MultNonParam	Multivariate Nonparametric Methods
2018-06-08	Peptides	Calculate Indices and Theoretical Physicochemical Properties of Protein Sequences
2018-06-08	rjson	JSON for R
2018-06-08	stringdist	Approximate String Matching and String Distance Functions
2018-06-08	TcGSA	Time-Course Gene Set Analysis
2018-06-08	TunePareto	Multi-Objective Parameter Tuning for Classifiers
2018-06-08	understandBPMN	Calculator of Understandability Metrics for BPMN
2018-06-08	wavemulcor	Wavelet Routines for Global and Local Multiple Correlation
2018-06-07	BoolNet	Construction, Simulation and Analysis of Boolean Networks
2018-06-07	briskaR	Biological Risk Assessment
2018-06-07	ConR	Computation of Parameters Used in Preliminary Assessment of Conservation Status
2018-06-07	detzrcr	Compare Detrital Zircon Suites
2018-06-07	fastcluster	Fast Hierarchical Clustering Routines for R and 'Python'
2018-06-07	fst	Lightning Fast Serialization of Data Frames for R
2018-06-07	gnFit	Goodness of Fit Test for Continuous Distribution Functions
2018-06-07	LAM	Some Latent Variable Models
2018-06-07	LPmerge	Merging Linkage Maps by Linear Programming
2018-06-07	mixR	Finite Mixture Modeling for Raw and Binned Data
2018-06-07	moveHMM	Animal Movement Modelling using Hidden Markov Models
2018-06-07	MPV	Data Sets from Montgomery, Peck and Vining
2018-06-07	netdiffuseR	Analysis of Diffusion and Contagion Processes on Networks
2018-06-07	pcse	Panel-Corrected Standard Error Estimation in R
2018-06-07	polysat	Tools for Polyploid Microsatellite Analysis
2018-06-07	RegularizedSCA	Regularized Simultaneous Component Based Data Integration
2018-06-07	rprev	Estimating Disease Prevalence from Registry Data
2018-06-07	ScottKnott	The ScottKnott Clustering Algorithm
2018-06-07	sievetest	Laboratory Sieve Test Reporting Functions
2018-06-07	skimr	Compact and Flexible Summaries of Data
2018-06-07	spex	Spatial Extent Tools
2018-06-07	tabulizer	Bindings for 'Tabula' PDF Table Extractor Library
2018-06-07	textshape	Tools for Reshaping Text
2018-06-07	tigreBrowserWriter	'tigreBrowser' Database Writer
2018-06-07	treeplyr	'dplyr' Functionality for Matched Tree and Data Objects
2018-06-07	uCAREChemSuiteCLI	Resistome Predicter
2018-06-07	wikilake	Scrape Lake Metadata Tables from Wikipedia
2018-06-06	AGHmatrix	Relationship Matrices for Diploid and Autopolyploid Species
2018-06-06	bench	High Precision Timing of R Expressions
2018-06-06	BICORN	Integrative Inference of De Novo Cis-Regulatory Modules
2018-06-06	bjscrapeR	An API Wrapper for the Bureau of Justice Statistics (BJS)
2018-06-06	CREAM	Clustering of Genomic Regions Analysis Method
2018-06-06	evmix	Extreme Value Mixture Modelling, Threshold Estimation and Boundary Corrected Kernel Density Estimation
2018-06-06	PBSmapping	Mapping Fisheries Data and Spatial Analysis Tools
2018-06-06	pds3	Manipulate PDS3 ODL Files
2018-06-06	plotlyGeoAssets	Render 'Plotly' Maps without an Internet Connection
2018-06-06	rERR	Excess Relative Risk Models
2018-06-06	rppo	Access the Global Plant Phenology Data Portal
2018-06-06	rtrek	Datasets and Functions Relating to Star Trek
2018-06-06	sambia	A Collection of Techniques Correcting for Sample Selection Bias
2018-06-06	SPAtest	Score Test and Meta-Analysis Based on Saddlepoint Approximation
2018-06-05	cdlTools	Tools to Download and Work with USDA Cropscape Data
2018-06-05	DHARMa	Residual Diagnostics for Hierarchical (Multi-Level / Mixed) Regression Models
2018-06-05	Dodge	Acceptance Sampling Ideas Originated by H.F. Dodge
2018-06-05	FIAR	Functional Integration Analysis in R
2018-06-05	FixedPoint	Algorithms for Finding Fixed Point Vectors of Functions
2018-06-05	gdm	Generalized Dissimilarity Modeling
2018-06-05	HH	Statistical Analysis and Data Display: Heiberger and Holland
2018-06-05	LendingClub	A Lending Club API Wrapper
2018-06-05	merTools	Tools for Analyzing Mixed Effect Regression Models
2018-06-05	networktools	Tools for Identifying Important Nodes in Networks
2018-06-05	nsprcomp	Non-Negative and Sparse PCA
2018-06-05	partykit	A Toolkit for Recursive Partytioning
2018-06-05	PLordprob	Multivariate Ordered Probit Model via Pairwise Likelihood
2018-06-05	plumber	An API Generator for R
2018-06-05	powerCompRisk	Power Analysis Tool for Joint Testing Hazards with Competing Risks Data
2018-06-05	RcppRoll	Efficient Rolling / Windowed Operations
2018-06-05	Rfmtool	Fuzzy Measure Tools
2018-06-05	ROI.plugin.qpoases	'qpOASES' Plugin for the 'R' Optimization Infrastructure
2018-06-05	seroincidence	Estimating Infection Rates from Serological Data
2018-06-05	serrsBayes	Bayesian Modelling of Raman Spectroscopy
2018-06-05	sp	Classes and Methods for Spatial Data
2018-06-05	SpatialNP	Multivariate Nonparametric Methods Based on Spatial Signs and Ranks
2018-06-05	Tcomp	Data from the 2010 Tourism Forecasting Competition
2018-06-05	tm.plugin.lexisnexis	Import Articles from 'LexisNexis' Using the 'tm' Text Mining Framework
2018-06-05	tvReg	Time-Varying Coefficients Linear Regression for Single and Multiple Equations
2018-06-04	autovarCore	Automated Vector Autoregression Models and Networks
2018-06-04	beepr	Easily Play Notification Sounds on any Platform
2018-06-04	blockmodeling	Generalized and Classical Blockmodeling of Valued Networks
2018-06-04	bootRes	Bootstrapped Response and Correlation Functions
2018-06-04	CePa	Centrality-Based Pathway Enrichment
2018-06-04	Compositional	Compositional Data Analysis
2018-06-04	CVglasso	Lasso Penalized Precision Matrix Estimation
2018-06-04	glmnetcr	Fit a Penalized Constrained Continuation Ratio Model for Predicting an Ordinal Response
2018-06-04	KRIS	Keen and Reliable Interface Subroutines for Bioinformatic Analysis
2018-06-04	mixdist	Finite Mixture Distribution Models
2018-06-04	pcalg	Methods for Graphical Models and Causal Inference
2018-06-04	pkr	Pharmacokinetics in R
2018-06-04	qrcmNP	Nonlinear and Penalized Quantile Regression Coefficients Modeling
2018-06-04	ranger	A Fast Implementation of Random Forests
2018-06-04	rcane	Different Numeric Optimizations to Estimate Parameter Coefficients
2018-06-04	readabs	Read 'Excel' Files from the Australian Bureau of Statistics into Tidy Data Sets
2018-06-04	RmarineHeatWaves	Detect Marine Heat Waves and Marine Cold Spells
2018-06-04	rres	Realized Relatedness Estimation and Simulation
2018-06-04	rwc	Random Walk Covariance Models
2018-06-04	tangram	The Grammar of Tables
2018-06-04	wISAM	Weighted Inbred Strain Association Mapping
2018-06-03	cardidates	Identification of Cardinal Dates in Ecological Time Series
2018-06-03	eigenmodel	Semiparametric Factor and Regression Models for Symmetric Relational Data
2018-06-03	excerptr	Excerpt Structuring Comments from Your Code File and Set a Table of Contents
2018-06-03	hergm	Hierarchical Exponential-Family Random Graph Models
2018-06-03	ibmdbR	IBM in-Database Analytics for R
2018-06-03	kSamples	K-Sample Rank Tests and their Combinations
2018-06-03	marelac	Tools for Aquatic Sciences
2018-06-03	mokken	Conducts Mokken Scale Analysis
2018-06-03	quickmapr	Quickly Map and Explore Spatial Data
2018-06-03	radir	Inverse-Regression Estimation of Radioactive Doses
2018-06-03	RedditExtractoR	Reddit Data Extraction Toolkit
2018-06-03	simecol	Simulation of Ecological (and Other) Dynamic Systems
2018-06-03	simsem	SIMulated Structural Equation Modeling
2018-06-03	tsDyn	Nonlinear Time Series Models with Regime Switching
2018-06-02	bib2df	Parse a BibTeX File to a data.frame
2018-06-02	LocalControl	Nonparametric Methods for Generating High Quality Comparative Effectiveness Evidence
2018-06-02	PairedData	Paired Data Analysis
2018-06-02	rasterVis	Visualization Methods for Raster Data
2018-06-02	seas	Seasonal Analysis and Graphics, Especially for Climatology
2018-06-02	shinymaterial	Implement Material Design in Shiny Applications
2018-06-02	sparseSVM	Solution Paths of Sparse High-Dimensional Support Vector Machine with Lasso or Elastic-Net Regularization
2018-06-02	SpatialEpi	Methods and Data for Spatial Epidemiology
2018-06-02	stream	Infrastructure for Data Stream Mining
2018-06-01	ccdrAlgorithm	CCDr Algorithm for Learning Sparse Gaussian Bayesian Networks
2018-06-01	colorednoise	Simulate Temporally Autocorrelated Populations
2018-06-01	FeaLect	Scores Features for Feature Selection
2018-06-01	fso	Fuzzy Set Ordination
2018-06-01	hmi	Hierarchical Multiple Imputation
2018-06-01	mixOmics	Omics Data Integration Project
2018-06-01	nitrcbot	Download Image Files from the 'NeuroImaging Tools and Resources Collaboratory'
2018-06-01	OBsMD	Objective Bayesian Model Discrimination in Follow-Up Designs
2018-06-01	odds.converter	Betting Odds Conversion
2018-06-01	RNentropy	Entropy Based Method for the Detection of Significant Variation in Gene Expression Data
2018-06-01	sitreeE	Sitree Extensions
2018-06-01	WaveletArima	Wavelet ARIMA Model
2018-06-01	welchADF	Welch-James Statistic for Robust Hypothesis Testing under Heterocedasticity and Non-Normality
2018-05-31	CBT	Confidence Bound Target Algorithm
2018-05-31	metaforest	Exploring Heterogeneity in Meta-Analysis using Random Forests
2018-05-31	MM4LMM	Inference of Linear Mixed Models Through MM Algorithm
2018-05-31	mvtnorm	Multivariate Normal and t Distributions
2018-05-31	OpenRepGrid	Tools to Analyze Repertory Grid Data
2018-05-31	phylolm	Phylogenetic Linear Regression
2018-05-31	redux	R Bindings to 'hiredis'
2018-05-30	abbyyR	Access to Abbyy Optical Character Recognition (OCR) API
2018-05-30	comclim	Community Climate Statistics
2018-05-30	comperank	Ranking Methods for Competition Results
2018-05-30	DDoutlier	Distance & Density-Based Outlier Detection
2018-05-30	GENLIB	Genealogical Data Analysis
2018-05-30	graphkernels	Graph Kernels
2018-05-30	hotspots	Hot Spots
2018-05-30	imager	Image Processing Library Based on 'CImg'
2018-05-30	lacm	Latent Autoregressive Count Models
2018-05-30	mixsmsn	Fitting Finite Mixture of Scale Mixture of Skew-Normal Distributions
2018-05-30	nricens	NRI for Risk Prediction Models with Time to Event and Binary Response Data
2018-05-30	occ	Estimates PET Neuroreceptor Occupancies
2018-05-30	overlapptest	Test Overlapping of Polygons Against Random Rotation
2018-05-30	plan	Tools for Project Planning
2018-05-30	PVR	Phylogenetic Eigenvectors Regression and Phylogentic Signal-Representation Curve
2018-05-30	r2d3	Interface to 'D3' Visualizations
2018-05-30	rollmatch	Rolling Entry Matching
2018-05-30	Semblance	Pair-Wise Semblance Using a Rank-Based Kernel
2018-05-30	SimEUCartelLaw	Simulation of Legal Exemption System for European Cartel Law
2018-05-30	SNPknock	Knockoffs for Hidden Markov Models and Genetic Data
2018-05-30	Spbsampling	Spatially Balanced Samples
2018-05-30	splusTimeDate	Times and Dates from S-PLUS
2018-05-30	stargazer	Well-Formatted Regression and Summary Statistics Tables
2018-05-30	swissMrP	Multilevel Regression with Post-Stratification (MrP) for Switzerland
2018-05-29	AGD	Analysis of Growth Data
2018-05-29	apcluster	Affinity Propagation Clustering
2018-05-29	bit	A Class for Vectors of 1-Bit Booleans
2018-05-29	brainGraph	Graph Theory Analysis of Brain MRI Data
2018-05-29	c3	'C3.js' Chart Library
2018-05-29	ePCR	Ensemble Penalized Cox Regression for Survival Prediction
2018-05-29	FarmTest	Factor Adjusted Robust Multiple Testing
2018-05-29	ggfocus	Focus on Specific Factor Levels in your ggplot()
2018-05-29	glmmEP	Generalized Linear Mixed Model Analysis via Expectation Propagation
2018-05-29	goric	Generalized Order-Restricted Information Criterion
2018-05-29	GrimR	Calculate Optical Parameters from Spindle Stage Measurements
2018-05-29	HardyWeinberg	Statistical Tests and Graphics for Hardy-Weinberg Equilibrium
2018-05-29	hdbinseg	Change-Point Analysis of High-Dimensional Time Series via Binary Segmentation
2018-05-29	infoDecompuTE	Information Decomposition of Two-Phase Experiments
2018-05-29	iqLearn	Interactive Q-Learning
2018-05-29	KoulMde	Koul's Minimum Distance Estimation in Linear Regression and Autoregression Model by Coordinate Descent Algorithm
2018-05-29	metaBLUE	BLUE for Combining Location and Scale Information in a Meta-Analysis
2018-05-29	metaLik	Likelihood Inference in Meta-Analysis and Meta-Regression Models
2018-05-29	NFWdist	The Standard Distribution Functions for the 3D NFW Profile
2018-05-29	ODEsensitivity	Sensitivity Analysis of Ordinary Differential Equations
2018-05-29	OpVaR	Statistical Methods for Modeling Operational Risk
2018-05-29	purrr	Functional Programming Tools
2018-05-29	purrrlyr	Tools at the Intersection of 'purrr' and 'dplyr'
2018-05-29	quantreg	Quantile Regression
2018-05-29	ramcmc	Robust Adaptive Metropolis Algorithm
2018-05-29	RatingScaleReduction	Rating Scale Reduction Procedure
2018-05-29	RchivalTag	Analyzing Archival Tagging Data
2018-05-29	rJava	Low-Level R to Java Interface
2018-05-29	sbgcop	Semiparametric Bayesian Gaussian Copula Estimation and Imputation
2018-05-29	scopr	Read Ethoscope Data
2018-05-29	simPop	Simulation of Synthetic Populations for Survey Data Considering Auxiliary Information
2018-05-29	SiZer	Significant Zero Crossings
2018-05-29	splusTimeSeries	Time Series from S-PLUS
2018-05-29	StructFDR	False Discovery Control Procedure Integrating the Prior Structure Information
2018-05-29	tempR	Temporal Sensory Data Analysis
2018-05-29	vegclust	Fuzzy Clustering of Vegetation Data
2018-05-29	waved	Wavelet Deconvolution
2018-05-29	yasp	String Functions for Compact R Code
2018-05-28	CUFF	Charles's Utility Function using Formula
2018-05-28	DClusterm	Model-Based Detection of Disease Clusters
2018-05-28	deeplr	Interface to the 'DeepL' Translation API
2018-05-28	HSAUR3	A Handbook of Statistical Analyses Using R (3rd Edition)
2018-05-28	joineRML	Joint Modelling of Multivariate Longitudinal Data and Time-to-Event Outcomes
2018-05-28	kde1d	Univariate Kernel Density Estimation
2018-05-28	manifestoR	Access and Process Data and Documents of the Manifesto Project
2018-05-28	osrmr	Wrapper for the 'OSRM' API
2018-05-28	plotMElm	Plot Marginal Effects from Linear Models
2018-05-28	PriorGen	Generates Prior Distributions for Proportions
2018-05-28	qgam	Smooth Additive Quantile Regression Models
2018-05-28	RHMS	Hydrologic Modelling System for R Users
2018-05-28	survBootOutliers	Concordance Based Bootstrap Methods for Outlier Detection in Survival Analysis
2018-05-27	bestglm	Best Subset GLM and Regression Utilities
2018-05-27	birdnik	Connector for the Wordnik API
2018-05-27	ddpcr	Analysis and Visualization of Droplet Digital PCR in R and on the Web
2018-05-27	FloodMapper	Cross-Scale Flooding Prediction under Heavy Precipitation
2018-05-27	Haplin	Analyzing Case-Parent Triad and/or Case-Control Data with SNP Haplotypes
2018-05-27	irregulAR1	Functions for Irregularly Sampled AR(1) Processes
2018-05-27	messaging	Conveniently Issue Messages, Warnings, and Errors
2018-05-27	mritc	MRI Tissue Classification
2018-05-27	pdftools	Text Extraction, Rendering and Converting of PDF Documents
2018-05-27	rdatacite	'DataCite' Client for 'OAI-PMH' Methods and their Search API
2018-05-27	rmutil	Utilities for Nonlinear Regression and Repeated Measurements Models
2018-05-27	rusk	Beautiful Graphical Representation of Multiplication Tables on a Modular Circle
2018-05-27	stemmatology	Stemmatological Analysis of Textual Traditions
2018-05-26	aspect	A General Framework for Multivariate Analysis with Optimal Scaling
2018-05-26	CVST	Fast Cross-Validation via Sequential Testing
2018-05-26	ggfortify	Data Visualization Tools for Statistical Analysis Results
2018-05-26	GoFKernel	Testing Goodness-of-Fit with the Kernel Density Estimator
2018-05-26	hamlet	Hierarchical Optimal Matching and Machine Learning Toolbox
2018-05-26	HLSM	Hierarchical Latent Space Network Model
2018-05-26	homals	Gifi Methods for Optimal Scaling
2018-05-26	htmlTable	Advanced Tables for Markdown/HTML
2018-05-26	MarkowitzR	Statistical Significance of the Markowitz Portfolio
2018-05-26	MetaLonDA	Metagenomics Longitudinal Differential Abundance Method
2018-05-26	MPsychoR	Modern Psychometrics with R
2018-05-26	oceanmap	A Plotting Toolbox for 2D Oceanographic Data
2018-05-26	openxlsx	Read, Write and Edit XLSX Files
2018-05-26	OTUtable	North Temperate Lakes - Microbial Observatory 16S Time Series Data and Functions
2018-05-26	PRISMA	Protocol Inspection and State Machine Analysis
2018-05-26	readstata13	Import 'Stata' Data Files
2018-05-26	sglasso	Lasso Method for RCON(V,E) Models
2018-05-26	stable	Probability Functions and Generalized Regression Models for Stable Distributions
2018-05-26	StratSel	Strategic Selection Estimator
2018-05-25	aws.s3	'AWS S3' Client Package
2018-05-25	bigsplines	Smoothing Splines for Large Samples
2018-05-25	clampSeg	Idealisation of Patch Clamp Recordings
2018-05-25	cricketr	Analyze Cricketers Based on ESPN Cricinfo Statsguru
2018-05-25	directlabels	Direct Labels for Multicolor Plots
2018-05-25	DisHet	Estimate the Gene Expression Levels and Component Proportions of the Normal, Stroma (Immune) and Tumor Components of Bulk Tumor Samples
2018-05-25	dtwSat	Time-Weighted Dynamic Time Warping for Satellite Image Time Series Analysis
2018-05-25	edgarWebR	SEC Filings Access
2018-05-25	FuncMap	Hive Plots of R Package Function Calls
2018-05-25	mbest	Moment-Based Estimation for Hierarchical Models
2018-05-25	PeakSegOptimal	Optimal Segmentation Subject to Up-Down Constraints
2018-05-25	phyloclim	Integrating Phylogenetics and Climatic Niche Modeling
2018-05-25	pkgmaker	Development Utilities for R Packages
2018-05-25	ptw	Parametric Time Warping
2018-05-25	rcongresso	Wraps the API for the Brazilian Chamber of Deputies
2018-05-24	ALEPlot	Accumulated Local Effects (ALE) Plots and Partial Dependence (PD) Plots
2018-05-24	BiDAG	Bayesian Inference for Directed Acyclic Graphs (BiDAG)
2018-05-24	cfma	Causal Functional Mediation Analysis
2018-05-24	cmce	Computer Model Calibration for Deterministic and Stochastic Simulators
2018-05-24	dfcomb	Phase I/II Adaptive Dose-Finding Design for Combination Studies
2018-05-24	dfmta	Phase I/II Adaptive Dose-Finding Design for MTA
2018-05-24	DPP	Inference of Parameters of Normal Distributions from a Mixture of Normals
2018-05-24	epiphy	Analysis of Plant Disease Epidemics
2018-05-24	event	Event History Procedures and Models
2018-05-24	fastM	Fast Computation of Multivariate M-Estimators
2018-05-24	gamlss.spatial	Spatial Terms in Generalized Additive Models for Location Scale and Shape Models
2018-05-24	ica	Independent Component Analysis
2018-05-24	knitrBootstrap	'knitr' Bootstrap Framework
2018-05-24	ldat	Large Data Sets
2018-05-24	locpol	Kernel Local Polynomial Regression
2018-05-24	lvec	Out of Memory Vectors
2018-05-24	MMPPsampler	Efficient Gibbs-Sampler for Markov-Modulated-Poisson-Processes
2018-05-24	neurohcp	Human 'Connectome' Project Interface
2018-05-24	PCPS	Principal Coordinates of Phylogenetic Structure
2018-05-24	riv	Robust Instrumental Variables Estimator
2018-05-24	SEA	Segregation Analysis
2018-05-24	tclust	Robust Trimmed Clustering
2018-05-24	utf8	Unicode Text Processing
2018-05-24	weibullness	Goodness-of-Fit Test for Weibull (Weibullness Test)
2018-05-23	AdaptFitOS	Adaptive Semiparametric Additive Regression with Simultaneous Confidence Bands and Specification Tests
2018-05-23	btb	Beyond the Border - Kernel Density Estimation for Urban Geography
2018-05-23	CLME	Constrained Inference for Linear Mixed Effects Models
2018-05-23	evtree	Evolutionary Learning of Globally Optimal Trees
2018-05-23	excel.link	Convenient Data Exchange with Microsoft Excel
2018-05-23	frailtyEM	Fitting Frailty Models with the EM Algorithm
2018-05-23	gsEasy	Gene Set Enrichment Analysis in R
2018-05-23	histmdl	A Most Informative Histogram-Like Model
2018-05-23	icd.data	International Classifcation of Diseases (ICD) Data
2018-05-23	latdiag	Draws Diagrams Useful for Checking Latent Scales
2018-05-23	LS2W	Locally Stationary Two-Dimensional Wavelet Process Estimation Scheme
2018-05-23	monotonicity	Test for Monotonicity in Expected Asset Returns, Sorted by Portfolios
2018-05-23	mratios	Ratios of Coefficients in the General Linear Model
2018-05-23	myTAI	Evolutionary Transcriptomics
2018-05-23	prodigenr	Research Project Directory Generator
2018-05-23	rvalues	R-Values for Ranking in High-Dimensional Settings
2018-05-23	synlik	Synthetic Likelihood Methods for Intractable Likelihoods
2018-05-23	ukbtools	Manipulate and Explore UK Biobank Data
2018-05-23	unsystation	Stationarity Test Based on Unsystematic Sub-Sampling
2018-05-22	ALA4R	Atlas of Living Australia (ALA) Data and Resources in R
2018-05-22	AppliedPredictiveModeling	Functions and Data Sets for 'Applied Predictive Modeling'
2018-05-22	aprof	Amdahl's Profiler, Directed Optimization Made Easy
2018-05-22	BIS	Programmatic Access to Bank for International Settlements Data
2018-05-22	C50	C5.0 Decision Trees and Rule-Based Models
2018-05-22	Cprob	The Conditional Probability Function of a Competing Event
2018-05-22	cranly	Package Directives and Collaboration Networks in CRAN
2018-05-22	devEMF	EMF Graphics Output Device
2018-05-22	FastHCS	FastHCS Robust Algorithm for Principal Component Analysis
2018-05-22	FastPCS	FastPCS Robust Fit of Multivariate Location and Scatter
2018-05-22	genotypeR	SNP Genotype Marker Design and Analysis
2018-05-22	ICtest	Estimating and Testing the Number of Interesting Components in Linear Dimension Reduction
2018-05-22	interlineaR	Importing Interlinearized Corpora and Dictionaries as Produced by Descriptive Linguistics Software
2018-05-22	intRegGOF	Integrated Regression Goodness of Fit
2018-05-22	kmi	Kaplan-Meier Multiple Imputation for the Analysis of Cumulative Incidence Functions in the Competing Risks Setting
2018-05-22	lgcp	Log-Gaussian Cox Process
2018-05-22	mapplots	Data Visualisation on Maps
2018-05-22	margins	Marginal Effects for Model Objects
2018-05-22	MaskJointDensity	Masking, Unmasking and Restoring Confidential Data
2018-05-22	microPop	Modelling Microbial Populations
2018-05-22	miniGUI	Tcl/Tk Quick and Simple Function GUI
2018-05-22	ODEnetwork	Network of Differential Equations
2018-05-22	PetfindeR	'Petfinder' API Wrapper
2018-05-22	philentropy	Similarity and Distance Quantification Between Probability Functions
2018-05-22	prioritizrdata	Conservation Planning Data Sets
2018-05-22	qmethod	Analysis of Subjective Perspectives Using Q Methodology
2018-05-22	quadprogXT	Quadratic Programming with Absolute Value Constraints
2018-05-22	qut	Quantile Universal Threshold
2018-05-22	regnet	Network-Based Regularization for Generalized Linear Models
2018-05-22	RSpectra	Solvers for Large-Scale Eigenvalue and SVD Problems
2018-05-22	smdata	Data to Accompany Smithson & Merkle, 2013
2018-05-22	spatsurv	Bayesian Spatial Survival Analysis with Parametric Proportional Hazards Models
2018-05-22	spMaps	Europe SpatialPolygonsDataFrame Builder
2018-05-22	srvyr	'dplyr'-Like Syntax for Summary Statistics of Survey Data
2018-05-22	templates	A System for Working with Templates
2018-05-22	ziphsmm	Zero-Inflated Poisson Hidden (Semi-)Markov Models
2018-05-21	AIG	Automatic Item Generator
2018-05-21	BINCOR	Estimate the Correlation Between Two Irregular Time Series
2018-05-21	clubSandwich	Cluster-Robust (Sandwich) Variance Estimators with Small-Sample Corrections
2018-05-21	Cubist	Rule- And Instance-Based Regression Modeling
2018-05-21	easycsv	Load Multiple 'csv' and 'txt' Tables
2018-05-21	FuzzyAHP	(Fuzzy) AHP Calculation
2018-05-21	gammSlice	Generalized Additive Mixed Model Analysis via Slice Sampling
2018-05-21	hitandrun	"Hit and Run" and "Shake and Bake" for Sampling Uniformly from Convex Shapes
2018-05-21	hnp	Half-Normal Plots with Simulation Envelopes
2018-05-21	kableExtra	Construct Complex Table with 'kable' and Pipe Syntax
2018-05-21	logiBin	Binning Variables to Use in Logistic Regression
2018-05-21	mixAK	Multivariate Normal Mixture Models and Mixtures of Generalized Linear Mixed Models Including Model Based Clustering
2018-05-21	neutralitytestr	Test for a Neutral Evolutionary Model in Cancer Sequencing Data
2018-05-21	nima	Nima Hejazi's R Toolbox
2018-05-21	SIRItoGTFS	Compare SIRI Datasets to GTFS Tables
2018-05-21	smaa	Stochastic Multi-Criteria Acceptability Analysis
2018-05-21	spuRs	Functions and Datasets for "Introduction to Scientific Programming and Simulation Using R"
2018-05-21	tabularaster	Tidy Tools for 'Raster' Data
2018-05-21	yuima	The YUIMA Project Package for SDEs
2018-05-20	ini	Read and Write '.ini' Files
2018-05-20	MAVE	Methods for Dimension Reduction
2018-05-20	NUCOMBog	NUtrient Cycling and COMpetition Model Undisturbed Open Bog Ecosystems in a Temperate to Sub-Boreal Climate
2018-05-20	PopGenome	An Efficient Swiss Army Knife for Population Genomic Analyses
2018-05-20	ritis	Integrated Taxonomic Information System Client
2018-05-20	TAQMNGR	Manage Tick-by-Tick Transaction Data
2018-05-19	BayesFactor	Computation of Bayes Factors for Common Designs
2018-05-19	biwavelet	Conduct Univariate and Bivariate Wavelet Analyses
2018-05-19	DetMCD	Implementation of the DetMCD Algorithm (Robust and Deterministic Estimation of Location and Scatter)
2018-05-19	DetR	Suite of Deterministic and Robust Algorithms for Linear Regression
2018-05-19	emdbook	Support Functions and Data for "Ecological Models and Data"
2018-05-19	HURDAT	Hurricane Re-Analysis Project
2018-05-19	kutils	Project Management Tools
2018-05-19	mvnmle	ML Estimation for Multivariate Normal Data with Missing Values
2018-05-19	pheatmap	Pretty Heatmaps
2018-05-19	PMCMR	Calculate Pairwise Multiple Comparisons of Mean Rank Sums
2018-05-19	popReconstruct	Reconstruct Human Populations of the Recent Past
2018-05-19	primefactr	Use Prime Factorization for Computations
2018-05-19	StepSignalMargiLike	Step-Wise Signal Extraction via Marginal Likelihood
2018-05-19	synchrony	Methods for Computing Spatial, Temporal, and Spatiotemporal Statistics
2018-05-19	wakefield	Generate Random Data Sets
2018-05-18	BayesX	R Utilities Accompanying the Software Package BayesX
2018-05-18	Biocomb	Feature Selection and Classification with the Embedded Validation Procedures for Biomedical Data Analysis
2018-05-18	BusinessDuration	Calculates Business Duration Between Two Dates
2018-05-18	childesr	Accessing the 'CHILDES' Database
2018-05-18	CompareCausalNetworks	Interface to Diverse Estimation Methods of Causal Networks
2018-05-18	CrossValidate	Classes and Methods for Cross Validation of "Class Prediction" Algorithms
2018-05-18	DstarM	Analyze Two Choice Reaction Time Data with the D*M Method
2018-05-18	dtw	Dynamic Time Warping Algorithms
2018-05-18	GAparsimony	Searching Parsimony Models with Genetic Algorithms
2018-05-18	ggjoy	Joyplots in 'ggplot2'
2018-05-18	inline	Functions to Inline C, C++, Fortran Function Calls from R
2018-05-18	joineR	Joint Modelling of Repeated Measurements and Time-to-Event Data
2018-05-18	Kpart	Cubic Spline Fitting with Knot Selection
2018-05-18	label.switching	Relabelling MCMC Outputs of Mixture Models
2018-05-18	miniUI	Shiny UI Widgets for Small Screens
2018-05-18	MixSAL	Mixtures of Multivariate Shifted Asymmetric Laplace (SAL) Distributions
2018-05-18	mmabig	Multiple Mediation Analysis for Big Data Sets
2018-05-18	Modeler	Classes and Methods for Training and Using Binary Prediction Models
2018-05-18	multDM	Multivariate Version of the Diebold-Mariano Test
2018-05-18	NormPsy	Normalisation of Psychometric Tests
2018-05-18	npsr	Validate Instrumental Variables using NPS
2018-05-18	PCDimension	Finding the Number of Significant Principal Components
2018-05-18	permutes	Permutation Tests for Time Series Data
2018-05-18	PhysicalActivity	Process Accelerometer Data for Physical Activity Measurement
2018-05-18	randgeo	Generate Random 'WKT' or 'GeoJSON'
2018-05-18	rbgm	Tools for 'Box Geometry Model' (BGM) Files and Topology for the Atlantis Ecosystem Model
2018-05-18	rdist	Calculate Pairwise Distances
2018-05-18	rsurface	Design of Rotatable Central Composite Experiments and Response Surface Analysis
2018-05-18	RUnit	R Unit Test Framework
2018-05-18	SIBERG	Systematic Identification of Bimodally Expressed Genes Using RNAseq Data
2018-05-18	simsurv	Simulate Survival Data
2018-05-18	smoothAPC	Smoothing of Two-Dimensional Demographic Data, Optionally Taking into Account Period and Cohort Effects
2018-05-18	spt	Sierpinski Pedal Triangle
2018-05-18	stR	STR Decomposition
2018-05-18	tryCatchLog	Advanced 'tryCatch()' and 'try()' Functions
2018-05-18	Umpire	Simulating Realistic Gene Expression Data
2018-05-17	adagio	Discrete and Global Optimization Routines
2018-05-17	adwave	Wavelet Analysis of Genomic Data from Admixed Populations
2018-05-17	ASGS.foyer	Interface to the Australian Statistical Geography Standard
2018-05-17	bootsPLS	Bootstrap Subsamplings of Sparse Partial Least Squares - Discriminant Analysis for Classification and Signature Identification
2018-05-17	BVSNLP	Bayesian Variable Selection in High Dimensional Settings using Nonlocal Priors
2018-05-17	ClassComparison	Classes and Methods for "Class Comparison" Problems on Microarrays
2018-05-17	colocalization	Normalized Spatial Intensity Correlation
2018-05-17	contfrac	Continued Fractions
2018-05-17	CrypticIBDcheck	Identifying Cryptic Relatedness in Genetic Association Studies
2018-05-17	ctv	CRAN Task Views
2018-05-17	datadogr	R Client for 'Datadog' API
2018-05-17	diffusr	Network Diffusion Algorithms
2018-05-17	emg	Exponentially Modified Gaussian (EMG) Distribution
2018-05-17	emulator	Bayesian Emulation of Computer Programs
2018-05-17	ExpDes	Experimental Designs
2018-05-17	ExpDes.pt	Pacote Experimental Designs (Portuguese)
2018-05-17	fat2Lpoly	Two-Locus Family-Based Association Test with Polytomous Outcome
2018-05-17	fracprolif	Fraction Proliferation via a Quiescent Growth Model
2018-05-17	geigen	Calculate Generalized Eigenvalues, the Generalized Schur Decomposition and the Generalized Singular Value Decomposition of a Matrix Pair with Lapack
2018-05-17	GGally	Extension to 'ggplot2'
2018-05-17	hermite	Generalized Hermite Distribution
2018-05-17	implyr	R Interface for Apache Impala
2018-05-17	lambda.r	Modeling Data with Functional Programming
2018-05-17	LeLogicielR	Functions and datasets to accompany the book "Le logiciel R: Maitriser le langage, Effectuer des analyses statistiques" (French)
2018-05-17	matchMulti	Optimal Multilevel Matching using a Network Algorithm
2018-05-17	memery	Internet Memes for Data Analysts
2018-05-17	MMS	Fixed Effects Selection in Linear Mixed Models
2018-05-17	modTurPoint	Estimate ED50 Based on Modified Turning Point Method
2018-05-17	mvinfluence	Influence Measures and Diagnostic Plots for Multivariate Linear Models
2018-05-17	nleqslv	Solve Systems of Nonlinear Equations
2018-05-17	numbers	Number-Theoretic Functions
2018-05-17	oompaBase	Class Unions, Matrix Operations, and Color Schemes for OOMPA
2018-05-17	orsk	Converting Odds Ratio to Relative Risk in Cohort Studies with Partial Data Information
2018-05-17	pmc	Phylogenetic Monte Carlo
2018-05-17	Polychrome	Qualitative Palettes with Many Colors
2018-05-17	PolynomF	Polynomials in R
2018-05-17	popprxl	Read GenAlEx Files Directly from Excel
2018-05-17	PortfolioAnalytics	Portfolio Analysis, Including Numerical Methods for Optimization of Portfolios
2018-05-17	PreProcess	Basic Functions for Pre-Processing Microarrays
2018-05-17	psychotools	Psychometric Modeling Infrastructure
2018-05-17	rcbsubset	Optimal Subset Matching with Refined Covariate Balance
2018-05-17	REddyProc	Post Processing of (Half-)Hourly Eddy-Covariance Measurements
2018-05-17	rfbCNPJ	Downloads and Parses Data from the Department of Federal Revenue in Brazil
2018-05-17	Rgbp	Hierarchical Modeling and Frequency Method Checking on Overdispersed Gaussian, Poisson, and Binomial Data
2018-05-17	robfilter	Robust Time Series Filters
2018-05-17	rtf	Rich Text Format (RTF) Output
2018-05-17	sdef	Synthesizing List of Differentially Expressed Features
2018-05-17	sFFLHD	Sequential Full Factorial-Based Latin Hypercube Design
2018-05-17	simsalapar	Tools for Simulation Studies in Parallel
2018-05-17	sparseIndexTracking	Design of Portfolio of Stocks to Track an Index
2018-05-17	survsim	Simulation of Simple and Complex Survival Data
2018-05-17	tabr	Create Guitar Tablature
2018-05-17	TailRank	The Tail-Rank Statistic
2018-05-17	tukeytrend	Tukeys Trend Test via Multiple Marginal Models
2018-05-17	VNM	Finding Multiple-Objective Optimal Designs for the 4-Parameter Logistic Model
2018-05-17	YuGene	A Simple Approach to Scale Gene Expression Data Derived from Different Platforms for Integrated Analyses
2018-05-17	zetadiv	Functions to Compute Compositional Turnover Using Zeta Diversity
2018-05-16	astrochron	A Computational Tool for Astrochronology
2018-05-16	BiDimRegression	Calculates the Bidimensional Regression Between Two 2D Configurations
2018-05-16	biogas	Process Biogas Data and Predict Biogas Production
2018-05-16	ChoR	Chordalysis R Package
2018-05-16	codep	Multiscale Codependence Analysis
2018-05-16	datasus	An Interface to DATASUS System
2018-05-16	edci	Edge Detection and Clustering in Images
2018-05-16	eive	An Algorithm for Reducing Errors-in-Variable Bias in Simple Linear Regression
2018-05-16	FSelector	Selecting Attributes
2018-05-16	furrr	Apply Mapping Functions in Parallel using Futures
2018-05-16	GLSME	Generalized Least Squares with Measurement Error
2018-05-16	icsw	Inverse Compliance Score Weighting
2018-05-16	iemisc	Irucka Embry's Miscellaneous Functions
2018-05-16	kdist	K-Distribution and Weibull Paper
2018-05-16	microsynth	Synthetic Control Methods with Micro- And Meso-Level Data
2018-05-16	MM	The Multiplicative Multinomial Distribution
2018-05-16	mmeln	Estimation of Multinormal Mixture Distribution
2018-05-16	MPSEM	Modeling Phylogenetic Signals using Eigenvector Maps
2018-05-16	MSGARCH	Markov-Switching GARCH Models
2018-05-16	mvSLOUCH	Multivariate Stochastic Linear Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses
2018-05-16	Nippon	Japanese Utility Functions and Data
2018-05-16	NipponMap	Japanese Map Data and Functions
2018-05-16	NSM3	Functions and Datasets to Accompany Hollander, Wolfe, and Chicken - Nonparametric Statistical Methods, Third Edition
2018-05-16	poibin	The Poisson Binomial Distribution
2018-05-16	popEpi	Functions for Epidemiological Analysis using Population Data
2018-05-16	rCBA	CBA Classifier for R
2018-05-16	RcmdrPlugin.MPAStats	R Commander Plug-in for MPA Statistics
2018-05-16	RECA	Relevant Component Analysis for Supervised Distance Metric Learning
2018-05-16	renpow	Renewable Power Systems and the Environment
2018-05-16	repo	A Data-Centered Data Flow Manager
2018-05-16	rust	Ratio-of-Uniforms Simulation with Transformation
2018-05-16	sdcMicro	Statistical Disclosure Control Methods for Anonymization of Microdata and Risk Estimation
2018-05-16	sharpr2	Estimating Regulatory Scores and Identifying ATAC-STARR Data
2018-05-16	SK	Segment-Based Ordinary Kriging and Segment-Based Regression Kriging for Spatial Prediction
2018-05-16	spgs	Statistical Patterns in Genomic Sequences
2018-05-16	SurvGSD	Group Sequential Design for a Clinical Trial with Censored Survival Data
2018-05-16	TFMPvalue	Efficient and Accurate P-Value Computation for Position Weight Matrices
2018-05-16	timedelay	Time Delay Estimation for Stochastic Time Series of Gravitationally Lensed Quasars
2018-05-16	tkrgl	'TK' Widget Tools for 'rgl'
2018-05-15	chromoMap	Interactive Visualization and Mapping of Human Chromosomes
2018-05-15	damr	Interface to Drosophila Activity Monitor System Result Files
2018-05-15	evidence	Analysis of Scientific Evidence Using Bayesian and Likelihood Methods
2018-05-15	ff	Memory-Efficient Storage of Large Data on Disk and Fast Access Functions
2018-05-15	GeneralizedHyperbolic	The Generalized Hyperbolic Distribution
2018-05-15	GERGM	Estimation and Fit Diagnostics for Generalized Exponential Random Graph Models
2018-05-15	gge	Genotype Plus Genotype-by-Environment Biplots
2018-05-15	HTSSIP	High Throughput Sequencing of Stable Isotope Probing Data Analysis
2018-05-15	missRanger	Fast Imputation of Missing Values
2018-05-15	NNS	Nonlinear Nonparametric Statistics
2018-05-15	PBNPA	Permutation Based Non-Parametric Analysis of CRISPR Screen Data
2018-05-15	PUlasso	High-Dimensional Variable Selection with Presence-Only Data
2018-05-15	qdap	Bridging the Gap Between Qualitative Data and Quantitative Analysis
2018-05-15	quantable	Streamline Descriptive Analysis of Quantitative Data Matrices
2018-05-15	RAM	R for Amplicon-Sequencing-Based Microbial-Ecology
2018-05-15	RankAggreg	Weighted Rank Aggregation
2018-05-15	refund	Regression with Functional Data
2018-05-15	RnavGraphImageData	Image Data Used in the Loon Package Demos
2018-05-15	rngtools	Utility Functions for Working with Random Number Generators
2018-05-15	rsunlight	Interface to 'Sunlight' Foundation 'APIs'
2018-05-15	rTableICC	Random Generation of Contingency Tables
2018-05-15	SpatialTools	Tools for Spatial Data Analysis
2018-05-15	specmine	Metabolomics and Spectral Data Analysis and Mining
2018-05-15	TreeBUGS	Hierarchical Multinomial Processing Tree Modeling
2018-05-15	vortexR	Post Vortex Simulation Analysis
2018-05-14	amap	Another Multidimensional Analysis Package
2018-05-14	AnalyzeFMRI	Functions for Analysis of fMRI Datasets Stored in the ANALYZE or NIFTI Format
2018-05-14	ASSA	Applied Singular Spectrum Analysis (ASSA)
2018-05-14	base64url	Fast and URL-Safe Base64 Encoder and Decoder
2018-05-14	bfp	Bayesian Fractional Polynomials
2018-05-14	catch	Covariate-Adjusted Tensor Classification in High-Dimensions
2018-05-14	DatabaseConnectorJars	JAR Dependencies for the 'DatabaseConnector' Package
2018-05-14	datamaps	Create Interactive Web Maps with the 'JavaScript Datamaps' Library
2018-05-14	difR	Collection of Methods to Detect Dichotomous Differential Item Functioning (DIF)
2018-05-14	dtp	Dynamic Panel Threshold Model
2018-05-14	facerec	An Interface for Face Recognition
2018-05-14	ffstream	Forgetting Factor Methods for Change Detection in Streaming Data
2018-05-14	ggsci	Scientific Journal and Sci-Fi Themed Color Palettes for 'ggplot2'
2018-05-14	hdnom	Benchmarking and Visualization Toolkit for Penalized Cox Models
2018-05-14	KSgeneral	Computing P-Values of the K-S Test for (Dis)Continuous Null Distribution
2018-05-14	liftr	Containerize R Markdown Documents for Continuous Reproducibility
2018-05-14	msaenet	Multi-Step Adaptive Estimation Methods for Sparse Regressions
2018-05-14	MTA	Multiscalar Territorial Analysis
2018-05-14	ph2hetero	Stratified Adaptive Designs for Two-Stage Phase II Studies
2018-05-14	picante	Integrating Phylogenies and Ecology
2018-05-14	rbi	R Interface to LibBi
2018-05-14	RKEELdata	Datasets from 'KEEL' for it Use in 'RKEEL'
2018-05-14	RobustCalibration	Robust Calibration of Imperfect Mathematical Models
2018-05-14	smacpod	Statistical Methods for the Analysis of Case-Control Point Data
2018-05-14	spearmanCI	Jackknife Euclidean / Empirical Likelihood Inference for Spearman's Rho
2018-05-14	SPOT	Sequential Parameter Optimization Toolbox
2018-05-14	tabulizerjars	'Java' .jar Files for 'tabulizer'
2018-05-14	treespace	Statistical Exploration of Landscapes of Phylogenetic Trees
2018-05-13	brotli	A Compression Format Optimized for the Web
2018-05-13	ComICS	Computational Methods for Immune Cell-Type Subsets
2018-05-13	coxme	Mixed Effects Cox Models
2018-05-13	enpls	Ensemble Partial Least Squares Regression
2018-05-13	FastRCS	Fits the FastRCS Robust Multivariable Linear Regression Model
2018-05-13	gamlr	Gamma Lasso Regression
2018-05-13	geoBayes	Analysis of Geostatistical Data using Bayes and Empirical Bayes Methods
2018-05-13	LPGraph	Nonparametric Smoothing of Laplacian Graph Spectra
2018-05-13	mcga	Machine Coded Genetic Algorithms for Real-Valued Optimization Problems
2018-05-13	metamisc	Diagnostic and Prognostic Meta-Analysis
2018-05-13	rJPSGCS	R-Interface to Gene Drop Simulation from JPSGCS
2018-05-13	RMySQL	Database Interface and 'MySQL' Driver for R
2018-05-13	RSiena	Siena - Simulation Investigation for Empirical Network Analysis
2018-05-13	sodavis	SODA: Main and Interaction Effects Selection for Logistic Regression, Quadratic Discriminant and General Index Models
2018-05-13	vitality	Fitting Routines for the Vitality Family of Mortality Models
2018-05-12	mltools	Machine Learning Tools
2018-05-12	PSM	Non-Linear Mixed-Effects Modelling using Stochastic Differential Equations
2018-05-12	SSN	Spatial Modeling on Stream Networks
2018-05-12	treeClust	Cluster Distances Through Trees
2018-05-11	ASIP	Automated Satellite Image Processing
2018-05-11	blorr	Tools for Developing Binary Logistic Regression Models
2018-05-11	cld2	Google's Compact Language Detector 2
2018-05-11	CleanBSequences	Clean Biological Sequences
2018-05-11	CPP	Composition of Probabilistic Preferences (CPP)
2018-05-11	GA	Genetic Algorithms
2018-05-11	HDclassif	High Dimensional Supervised Classification and Clustering
2018-05-11	Knoema	Interface to the Knoema API
2018-05-11	LPower	Calculates Power, Sample Size, or Detectable Effect for Longitudinal Analyses
2018-05-11	MEclustnet	Fitting the Mixture of Experts Latent Position Cluster Model to Network Data
2018-05-11	mgwrsar	GWR and MGWR with Spatial Autocorrelation
2018-05-11	modelr	Modelling Functions that Work with the Pipe
2018-05-11	nVennR	Create n-Dimensional, Quasi-Proportional Venn Diagrams
2018-05-11	Observation	Collect and Process Physical Activity Direct Observation Data
2018-05-11	oec	Observatory of Economic Complexity API Wrapper and Utility Program
2018-05-11	openSTARS	An Open Source Implementation of the 'ArcGIS' Toolbox 'STARS'
2018-05-11	randquotes	Get Random Quotes from Quotes on Design API
2018-05-11	RcppProgress	An Interruptible Progress Bar with OpenMP Support for C++ in R Packages
2018-05-11	REddyProcNCDF	Reading Data from NetCDF Files for 'REddyProc'
2018-05-11	SCCS	The Self-Controlled Case Series Method
2018-05-11	SEERaBomb	SEER and Atomic Bomb Survivor Data Analysis Tools
2018-05-11	Select	Determines Species Probabilities Based on Functional Traits
2018-05-11	shiny.semantic	Semantic UI Support for Shiny
2018-05-11	spFSR	Feature Selection and Ranking by Simultaneous Perturbation Stochastic Approximation
2018-05-10	asympTest	A Simple R Package for Classical Parametric Statistical Tests and Confidence Intervals in Large Samples
2018-05-10	Benchmarking	Benchmark and Frontier Analysis Using DEA and SFA
2018-05-10	blandr	Bland-Altman Method Comparison
2018-05-10	childhoodmortality	Calculating Childhood Mortality Rates
2018-05-10	elect	Estimation of Life Expectancies Using Multi-State Models
2018-05-10	epiDisplay	Epidemiological Data Display Package
2018-05-10	groc	Generalized Regression on Orthogonal Components
2018-05-10	ismev	An Introduction to Statistical Modeling of Extreme Values
2018-05-10	MVisAGe	Compute and Visualize Bivariate Associations
2018-05-10	nadiv	(Non)Additive Genetic Relatedness Matrices
2018-05-10	QuasiSeq	Analyzing RNA Sequencing Count Tables Using Quasi-Likelihood
2018-05-10	quhomology	Calculation of Homology of Quandles, Racks, Biquandles and Biracks
2018-05-10	RcmdrPlugin.HH	Rcmdr Support for the HH Package
2018-05-10	readtext	Import and Handling for Plain and Formatted Text Files
2018-05-10	ROI.plugin.alabama	'alabama' Plug-in for the 'R' Optimization Infrastructure
2018-05-10	rPowerSampleSize	Sample Size Computations Controlling the Type-II Generalized Family-Wise Error Rate
2018-05-10	rsvg	Render SVG Images into PDF, PNG, PostScript, or Bitmap Arrays
2018-05-10	SGP	Student Growth Percentiles & Percentile Growth Trajectories
2018-05-10	stringr	Simple, Consistent Wrappers for Common String Operations
2018-05-10	TrajDataMining	Trajectories Data Mining
2018-05-10	trajr	Animal Trajectory Analysis
2018-05-10	TRSbook	Functions and Datasets to Accompany the Book "The R Software: Fundamentals of Programming and Statistical Analysis"
2018-05-09	BacArena	Modeling Framework for Cellular Communities in their Environments
2018-05-09	BIEN	Tools for Accessing the Botanical Information and Ecology Network Database
2018-05-09	cati	Community Assembly by Traits: Individuals and Beyond
2018-05-09	dad	Three-Way Data Analysis Through Densities
2018-05-09	deSolve	Solvers for Initial Value Problems of Differential Equations ('ODE', 'DAE', 'DDE')
2018-05-09	EMSaov	The Analysis of Variance with EMS
2018-05-09	GGMM	Mixture Gaussian Graphical Models
2018-05-09	ggrepel	Automatically Position Non-Overlapping Text Labels with 'ggplot2'
2018-05-09	GRANBase	Creating Continuously Integrated Package Repositories from Manifests
2018-05-09	island	Stochastic Island Biogeography Theory Made Easy
2018-05-09	qtbase	Interface Between R and 'Qt'
2018-05-09	staplr	A Toolkit for PDF Files
2018-05-09	tidyquant	Tidy Quantitative Financial Analysis
2018-05-09	xyloplot	A Method for Creating Xylophone-Like Frequency Density Plots
2018-05-08	Amelia	A Program for Missing Data
2018-05-08	coga	Convolution of Gamma Distributions
2018-05-08	DescriptiveStats.OBeu	Descriptive Statistics 'OpenBudgets.eu'
2018-05-08	FIT	Transcriptomic Dynamics Models in Field Conditions
2018-05-08	fscaret	Automated Feature Selection from 'caret'
2018-05-08	fuzzr	Fuzz-Test R Functions
2018-05-08	gdpc	Generalized Dynamic Principal Components
2018-05-08	isqg	In Silico Quantitative Genetics
2018-05-08	jiebaR	Chinese Text Segmentation
2018-05-08	LeArEst	Border and Area Estimation of Data Measured with Additive Error
2018-05-08	leerSIECyL	Read Data from the SIE
2018-05-08	phiDelta	Tool for Phi Delta Analysis of Features
2018-05-08	praznik	Collection of Information-Based Feature Selection Filters
2018-05-08	red	IUCN Redlisting Tools
2018-05-08	rpf	Response Probability Functions
2018-05-08	ruta	Implementation of Unsupervised Neural Architectures
2018-05-08	ScottKnottESD	The Scott-Knott Effect Size Difference (ESD) Test
2018-05-08	statsr	Companion Package for Statistics with R
2018-05-08	survRM2adapt	Flexible and Coherent Test/Estimation Procedure Based on Restricted Mean Survival Times
2018-05-07	BlockFeST	Bayesian Calculation of Region-Specific Fixation Index to Detect Local Adaptation
2018-05-07	bsts	Bayesian Structural Time Series
2018-05-07	CondIndTests	Nonlinear Conditional Independence Tests
2018-05-07	CRF	Conditional Random Fields
2018-05-07	CTRE	Thresholding Bursty Time Series
2018-05-07	dlib	Allow Access to the 'Dlib' C++ Library
2018-05-07	earth	Multivariate Adaptive Regression Splines
2018-05-07	EMbC	Expectation-Maximization Binary Clustering
2018-05-07	FlowScreen	Daily Streamflow Trend and Change Point Screening
2018-05-07	gdistance	Distances and Routes on Geographical Grids
2018-05-07	gWQS	Generalized Weighted Quantile Sum Regression
2018-05-07	JSM	Semiparametric Joint Modeling of Survival and Longitudinal Data
2018-05-07	lmvar	Linear Regression with Non-Constant Variances
2018-05-07	modeldb	Fits Models Inside the Database
2018-05-07	MPkn	Calculations of One Discrete Model in Several Time Steps
2018-05-07	nardl	Nonlinear Cointegrating Autoregressive Distributed Lag Model
2018-05-07	OscillatorGenerator	Generation of Customizable, Discretized Time Series of Oscillating Species
2018-05-07	oXim	Oxycline Index from Matrix Echograms
2018-05-07	pairwiseCI	Confidence Intervals for Two Sample Comparisons
2018-05-07	rbamtools	Read and Write BAM (Binary Alignment) Files
2018-05-07	RcmdrPlugin.OptimClassifier	Create the Best Train for Classification Models
2018-05-07	rdi	Repertoire Dissimilarity Index
2018-05-07	rijkspalette	Create Colour Palettes Based on Famous Artworks from the Rijksmuseum
2018-05-07	rpanel	Simple Interactive Controls for R using the 'tcltk' Package
2018-05-07	SemiCompRisks	Hierarchical Models for Parametric and Semi-Parametric Analyses of Semi-Competing Risks Data
2018-05-07	sensors4plumes	Test and Optimise Sampling Designs Based on Plume Simulations
2018-05-07	shinytest	Test Shiny Apps
2018-05-07	tuber	Client for the YouTube API
2018-05-07	webr	Data and Functions for Web-Based Analysis
2018-05-06	covsep	Tests for Determining if the Covariance Structure of 2-Dimensional Data is Separable
2018-05-06	dbplot	Simplifies Plotting Data Inside Databases
2018-05-06	esc	Effect Size Computation for Meta Analysis
2018-05-06	imagine	IMAGing engINE, Tools for Application of Image Filters to Data Matrices
2018-05-06	JoSAE	Unit-Level and Area-Level Small Area Estimation
2018-05-06	lmeVarComp	Testing for a Subset of Variance Components in Linear Mixed Models
2018-05-06	miceFast	Fast Imputations Using 'Rcpp' and 'Armadillo'
2018-05-06	MOLHD	Multiple Objective Latin Hypercube Design
2018-05-06	propagate	Propagation of Uncertainty
2018-05-06	RMariaDB	Database Interface and 'MariaDB' Driver
2018-05-06	RPostgres	'Rcpp' Interface to 'PostgreSQL'
2018-05-06	RSQLite	'SQLite' Interface for R
2018-05-06	tidystats	Create a Tidy Statistics Output File
2018-05-06	uncertainty	Uncertainty Estimation and Contribution Analysis
2018-05-05	AssocAFC	Allele Frequency Comparison
2018-05-05	crsra	Tidying and Analyzing 'Coursera' Research Export Data
2018-05-05	easyPubMed	Search and Retrieve Scientific Publication Records from PubMed
2018-05-05	expoRkit	Expokit in R
2018-05-05	FactoInvestigate	Automatic Description of Factorial Analysis
2018-05-05	oglmx	Estimation of Ordered Generalized Linear Models
2018-05-05	pbdRPC	Programming with Big Data – Remote Procedure Call
2018-05-05	pbdZMQ	Programming with Big Data – Interface to 'ZeroMQ'
2018-05-05	rpms	Recursive Partitioning for Modeling Survey Data
2018-05-04	ameco	European Commission Annual Macro-Economic (AMECO) Database
2018-05-04	bartMachine	Bayesian Additive Regression Trees
2018-05-04	Barycenter	Regularized Wasserstein Distances and Barycenters
2018-05-04	catenary	Fits a Catenary to Given Points
2018-05-04	climatol	Climate Tools (Series Homogenization and Derived Products)
2018-05-04	clinDR	Simulation and Analysis Tools for Clinical Dose Response Modeling
2018-05-04	codemetar	Generate 'CodeMeta' Metadata for R Packages
2018-05-04	DAC	Calculating Data Agreement Criterion Scores to Rank Experts Based on Their Beliefs
2018-05-04	difNLR	DIF and DDF Detection by Non-Linear Regression Models
2018-05-04	enrichwith	Methods to Enrich R Objects with Extra Components
2018-05-04	FactoMineR	Multivariate Exploratory Data Analysis and Data Mining
2018-05-04	filenamer	Easy Management of File Names
2018-05-04	Matching	Multivariate and Propensity Score Matching with Balance Optimization
2018-05-04	matR	Metagenomics Analysis Tools
2018-05-04	MSCMT	Multivariate Synthetic Control Method Using Time Series
2018-05-04	msma	Multiblock Sparse Multivariable Analysis
2018-05-04	ProjectionBasedClustering	Projection Based Clustering
2018-05-04	rgenoud	R Version of GENetic Optimization Using Derivatives
2018-05-04	SanzCircos	Functions for Creating 'Circos' Files
2018-05-04	spduration	Split-Population Duration (Cure) Regression
2018-05-04	statcheck	Extract Statistics from Articles and Recompute p Values
2018-05-04	states	Create Panels of Independent States
2018-05-04	SurvDisc	Discrete Time Survival and Longitudinal Data Analysis
2018-05-04	TDMR	Tuned Data Mining in R
2018-05-04	treedater	Fast Molecular Clock Dating of Phylogenetic Trees with Rate Variation
2018-05-03	aroma.core	Core Methods and Classes Used by 'aroma.*' Packages Part of the Aroma Framework
2018-05-03	beam	Fast Bayesian Inference in Large Gaussian Graphical Models
2018-05-03	clustrd	Methods for Joint Dimension Reduction and Clustering
2018-05-03	cyclestreets	Cycle Routing and Data for Cycling Advocacy
2018-05-03	elementR	An Framework for Reducing Elemental LAICPMS Data from Solid Structures
2018-05-03	Formula	Extended Model Formulas
2018-05-03	glm.predict	Predicted Values and Discrete Changes for GLM
2018-05-03	gss	General Smoothing Splines
2018-05-03	GWLelast	Geographically Weighted Logistic Elastic Net Regression
2018-05-03	InterpretMSSpectrum	Interpreting High Resolution Mass Spectra
2018-05-03	jsonld	JSON for Linking Data
2018-05-03	overlap	Estimates of Coefficient of Overlapping for Animal Activity Patterns
2018-05-03	popbio	Construction and Analysis of Matrix Population Models
2018-05-03	psyosphere	Analyse GPS Data
2018-05-03	SBSDiff	Satorra-Bentler Scaled Chi-Squared Difference Test
2018-05-03	sstModel	Swiss Solvency Test (SST) Standard Models
2018-05-03	turboEM	A Suite of Convergence Acceleration Schemes for EM, MM and Other Fixed-Point Algorithms
2018-05-03	weco	Western Electric Company Rules (WECO) for Shewhart Control Chart
2018-05-02	AR	Another Look at the Acceptance-Rejection Method
2018-05-02	aricode	Efficient Computations of Standard Clustering Comparison Measures
2018-05-02	Calculator.LR.FNs	Calculator for LR Fuzzy Numbers
2018-05-02	cattonum	Encode Categorical Features
2018-05-02	DBI	R Database Interface
2018-05-02	goodpractice	Advice on R Package Building
2018-05-02	intamap	Procedures for Automated Interpolation
2018-05-02	intcensROC	Fast Spline Function Based Constrained Maximum Likelihood Estimator for AUC Estimation of Interval Censored Survival Data
2018-05-02	mizer	Multi-Species sIZE Spectrum Modelling in R
2018-05-02	mrbsizeR	Scale Space Multiresolution Analysis of Random Signals
2018-05-02	paleofire	Analysis of Charcoal Records from the Global Charcoal Database
2018-05-02	phenoCDM	Continuous Development Models for Incremental Time-Series Analysis
2018-05-02	PLMIX	Bayesian Analysis of Finite Mixtures of Plackett-Luce Models for Partial Rankings/Orderings
2018-05-02	PLmixed	Estimate (Generalized) Linear Mixed Models with Factor Structures
2018-05-02	pointblank	Validation of Local and Remote Data Tables
2018-05-02	RAC	R Package for Aqua Culture
2018-05-02	xplain	Providing Interactive Interpretations and Explanations of Statistical Results
2018-05-01	BinaryEPPM	Mean and Variance Modeling of Binary Data
2018-05-01	brt	Biological Relevance Testing
2018-05-01	CRPClustering	Bayesian Nonparametric Chinese Restaurant Process Clustering with Entropy
2018-05-01	crs	Categorical Regression Splines
2018-05-01	daymetr	Interface to the 'Daymet' Web Services
2018-05-01	desc	Manipulate DESCRIPTION Files
2018-05-01	ECctmc	Simulation from Endpoint-Conditioned Continuous Time Markov Chains
2018-05-01	estprod	Estimation of Production Functions
2018-05-01	glmmBUGS	Generalised Linear Mixed Models with BUGS and JAGS
2018-05-01	icesSAG	Stock Assessment Graphs Database Web Services
2018-05-01	IMIFA	Infinite Mixtures of Infinite Factor Analysers and Related Models
2018-05-01	ISOpureR	Deconvolution of Tumour Profiles
2018-05-01	Jdmbs	Monte Carlo Option Pricing Algorithms for Jump Diffusion Models with Correlational Companies
2018-05-01	lmSubsets	Exact Variable-Subset Selection in Linear Regression
2018-05-01	nprobust	Nonparametric Robust Estimation and Inference Methods using Local Polynomial Regression and Kernel Density Estimation
2018-05-01	pivot	'SQL' PIVOT and UNPIVOT
2018-05-01	Rnumerai	Interface to the Numerai Machine Learning Tournament API
2018-05-01	rwunderground	R Interface to Weather Underground API
2018-05-01	sbart	Sequential BART for Imputation of Missing Covariates
2018-05-01	scape	Statistical Catch-at-Age Plotting Environment
2018-05-01	shinystan	Interactive Visual and Numerical Diagnostics and Posterior Analysis for Bayesian Models
2018-05-01	Sstack	Bootstrap Stacking of Random Forest Models for Heterogeneous Data
2018-05-01	stosim	Stochastic Simulator for Reliability Modeling of Repairable Systems
2018-05-01	UsingR	Data Sets, Etc. for the Text "Using R for Introductory Statistics", Second Edition
2018-04-30	BBMV	Models for Continuous Traits Evolving in Macroevolutionary Landscapes of any Shape
2018-04-30	bigIntegerAlgos	R Tool for Factoring Big Integers
2018-04-30	BoomSpikeSlab	MCMC for Spike and Slab Regression
2018-04-30	cbsodataR	Statistics Netherlands (CBS) Open Data API Client
2018-04-30	experiment	R Package for Designing and Analyzing Randomized Experiments
2018-04-30	gcmr	Gaussian Copula Marginal Regression
2018-04-30	getlandsat	Get Landsat 8 Data from Amazon Public Data Sets
2018-04-30	jsr223	A 'Java' Platform Integration for 'R' with Programming Languages 'Groovy', 'JavaScript', 'JRuby' ('Ruby'), 'Jython' ('Python'), and 'Kotlin'
2018-04-30	LatticeKrig	Multiresolution Kriging Based on Markov Random Fields
2018-04-30	mlbgameday	Tools to Gather Data from Major League Baseball Advanced Media (MLBAM)
2018-04-30	originr	Fetch Species Origin Data from the Web
2018-04-30	pcIRT	IRT Models for Polytomous and Continuous Item Responses
2018-04-30	qte	Quantile Treatment Effects
2018-04-30	quadrupen	Sparsity by Worst-Case Quadratic Penalties
2018-04-30	RZigZag	Zig-Zag Sampler
2018-04-30	simr	Power Analysis for Generalised Linear Mixed Models by Simulation
2018-04-30	TSP	Traveling Salesperson Problem (TSP)
2018-04-30	vMask	Detect Small Changes in Process Mean using CUSUM Control Chart by v-Mask
2018-04-29	Boom	Bayesian Object Oriented Modeling
2018-04-29	CompGLM	Conway-Maxwell-Poisson GLM and Distribution Functions
2018-04-29	convexjlr	Disciplined Convex Programming in R using 'Convex.jl'
2018-04-29	hyperSMURF	Hyper-Ensemble Smote Undersampled Random Forests
2018-04-29	predtoolsTS	Time Series Prediction Tools
2018-04-29	Rmalschains	Continuous Optimization using Memetic Algorithms with Local Search Chains (MA-LS-Chains) in R
2018-04-29	robustlmm	Robust Linear Mixed Effects Models
2018-04-29	sqlscore	Utilities for Generating SQL Queries from Model Objects
2018-04-29	tableone	Create 'Table 1' to Describe Baseline Characteristics
2018-04-28	AFM	Atomic Force Microscope Image Analysis
2018-04-28	anesrake	ANES Raking Implementation
2018-04-28	BigQuic	Big Quadratic Inverse Covariance Estimation
2018-04-28	sensR	Thurstonian Models for Sensory Discrimination
2018-04-27	brainKCCA	Region-Level Connectivity Network Construction via Kernel Canonical Correlation Analysis
2018-04-27	diffeqr	Solving Differential Equations (ODEs, SDEs, DDEs, DAEs)
2018-04-27	envalysis	Miscellaneous Functions for Environmental Analyses
2018-04-27	foolbox	Function manipulation toolbox
2018-04-27	jmdem	Fitting Joint Mean and Dispersion Effects Models
2018-04-27	jmetrik	Tools for Interacting with 'jMetrik'
2018-04-27	mathpix	Support for the 'Mathpix' API (Image to 'LaTeX')
2018-04-27	mrgsolve	Simulate from ODE-Based Population PK/PD and Systems Pharmacology Models
2018-04-27	MultiplierDEA	Multiplier Data Envelopment Analysis and Cross Efficiency
2018-04-27	scorecardModelUtils	Credit Scorecard Modelling Utils
2018-04-27	smartsizer	Power Analysis for a SMART Design
2018-04-27	tailr	Automatic Tail Recursion Optimisation
2018-04-27	vdiffr	Visual Regression Testing and Graphical Diffing
2018-04-26	BLSM	Bayesian Latent Space Model
2018-04-26	detpack	Density Estimation and Random Number Generation with Distribution Element Trees
2018-04-26	efts	High-Level Functions to Read and Write Ensemble Forecast Time Series in netCDF
2018-04-26	FHDI	Fractional Hot Deck and Fully Efficient Fractional Imputation
2018-04-26	kdtools	Tools for Working with Multidimensional Data
2018-04-26	MixfMRI	Mixture fMRI Clustering Analysis
2018-04-26	pooling	Fit Poolwise Regression Models
2018-04-26	raw	R Actuarial Workshops
2018-04-26	rddapp	Regression Discontinuity Design Application
2018-04-26	SpatialFloor	Spatial Floor Simulation (Isotropic)
2018-04-26	svDialogs	'SciViews' - Standard Dialog Boxes for Windows, MacOS and Linuxes
2018-04-26	TableMonster	Table Monster
2018-04-26	timechange	Efficient Changing of Date-Times
2018-04-25	base2grob	Convert Base Plot to 'grob' Object
2018-04-25	edpclient	Empirical Data Platform Client
2018-04-25	enviGCMS	GC/LC-MS Data Analysis for Environmental Science
2018-04-25	equalCovs	Testing the Equality of Two Covariance Matrices
2018-04-25	evd	Functions for Extreme Value Distributions
2018-04-25	forestmodel	Forest Plots from Regression Models
2018-04-25	gensvm	A Generalized Multiclass Support Vector Machine
2018-04-25	lavaanPlot	Path Diagrams for Lavaan Models via DiagrammeR
2018-04-25	ManlyMix	Manly Mixture Modeling and Model-Based Clustering
2018-04-25	MiRKAT	Microbiome Regression-Based Kernel Association Test
2018-04-25	MittagLeffleR	Mittag-Leffler Family of Distributions
2018-04-25	onnx	R Interface to 'ONNX'
2018-04-25	qgraph	Graph Plotting Methods, Psychometric Data Visualization and Graphical Model Estimation
2018-04-25	RefManageR	Straightforward 'BibTeX' and 'BibLaTeX' Bibliography Management
2018-04-25	shinyLP	Bootstrap Landing Home Pages for Shiny Applications
2018-04-25	SOR	Estimation using Sequential Offsetted Regression
2018-04-25	sourcetools	Tools for Reading, Tokenizing and Parsing R Code
2018-04-25	survivALL	Continuous Biomarker Assessment by Exhaustive Survival Analysis
2018-04-25	svmplus	Implementation of Support Vector Machines Plus (SVM+)
2018-04-25	worms	Retriving Aphia Information from World Register of Marine Species
2018-04-24	archivist	Tools for Storing, Restoring and Searching for R Objects
2018-04-24	BayesXsrc	R Package Distribution of the BayesX C++ Sources
2018-04-24	bigrquery	An Interface to Google's 'BigQuery' 'API'
2018-04-24	CJAMP	Copula-Based Joint Analysis of Multiple Phenotypes
2018-04-24	cultevo	Tools, Measures and Statistical Tests for Cultural Evolution
2018-04-24	DDD	Diversity-Dependent Diversification
2018-04-24	EMVS	The Expectation-Maximization Approach to Bayesian Variable Selection
2018-04-24	EpiCurve	Plot an Epidemic Curve
2018-04-24	frambgrowth	Simulation of the Growth of Framboidal and Sunflower Pyrite
2018-04-24	imdbapi	Get Movie, Television Data from the 'imdb' Database
2018-04-24	MARX	Simulation, Estimation, Model Selection and Forecasting for MARX Models
2018-04-24	Morpho	Calculations and Visualisations Related to Geometric Morphometrics
2018-04-24	nmfem	NMF-EM Algorithm
2018-04-24	PieceExpIntensity	Bayesian Model to Find Changepoints Based on Rates and Count Data
2018-04-24	pmultinom	One-Sided Multinomial Probabilities
2018-04-24	SNFtool	Similarity Network Fusion
2018-04-24	SourceSet	A Graphical Model Approach to Identify Primary Genes in Perturbed Biological Pathways
2018-04-24	upwaver	Access 'Upwave' API
2018-04-24	VarReg	Semi-Parametric Variance Regression
2018-04-24	water	Actual Evapotranspiration with Energy Balance Models
2018-04-23	ACTCD	Asymptotic Classification Theory for Cognitive Diagnosis
2018-04-23	APML0	Augmented and Penalized Minimization Method L0
2018-04-23	arulesCBA	Classification Based on Association Rules
2018-04-23	BoutrosLab.plotting.general	Create Publication-Quality Plots
2018-04-23	CorReg	Linear Regression Based on Linear Structure Between Variables
2018-04-23	cubing	Rubik's Cube Solving
2018-04-23	dcurver	Utility Functions for Davidian Curves
2018-04-23	fbati	Gene by Environment Interaction and Conditional Gene Tests for Nuclear Families
2018-04-23	gdalUtils	Wrappers for the Geospatial Data Abstraction Library (GDAL) Utilities
2018-04-23	grex	Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data
2018-04-23	komadown	R Markdown Templates for the 'KOMA-Script' Classes
2018-04-23	leaflet.esri	'ESRI' Bindings for the 'leaflet' Package
2018-04-23	listarrays	A Toolbox for Working with R Arrays in a Functional Programming Style
2018-04-23	lmerTest	Tests in Linear Mixed Effects Models
2018-04-23	relations	Data Structures and Algorithms for Relations
2018-04-23	semantic.dashboard	Dashboard with Semantic UI Support for 'shiny'
2018-04-23	sigmaNet	Render Graphs Using 'Sigma.js'
2018-04-23	slam	Sparse Lightweight Arrays and Matrices
2018-04-23	spatial.tools	R Functions for Working with Spatial Data
2018-04-23	spBayesSurv	Bayesian Modeling and Analysis of Spatially Correlated Survival Data
2018-04-23	svGUI	SciViews - Manage GUIs in R
2018-04-23	tactile	New and Extended Plots, Methods, and Panel Functions for 'lattice'
2018-04-23	varrank	Heuristics Tools Based on Mutual Information for Variable Ranking
2018-04-23	walkalytics	Interface to the 'Walkalytics' API for Calculating Walking Isochrones
2018-04-22	disclapmix	Discrete Laplace Mixture Inference using the EM Algorithm
2018-04-22	psgp	Projected Spatial Gaussian Process Methods
2018-04-22	R.oo	R Object-Oriented Programming with or without References
2018-04-22	RSiteCatalyst	R Client for Adobe Analytics API V1.4
2018-04-22	VetResearchLMM	Linear Mixed Models - An Introduction with Applications in Veterinary Research
2018-04-21	autoplotly	Automatic Generation of Interactive Visualizations for Statistical Results
2018-04-21	fgui	Function GUI
2018-04-21	Greg	Regression Helper Functions
2018-04-21	kerndwd	Distance Weighted Discrimination (DWD) and Kernel Methods
2018-04-21	leaflet.extras	Extra Functionality for 'leaflet' Package
2018-04-21	s2	Google's S2 Library for Geometry on the Sphere
2018-04-21	smovie	Some Movies to Illustrate Concepts in Statistics
2018-04-21	TSEtools	Download and Manage Data from Tehran Stock Exchange
2018-04-20	alr4	Data to Accompany Applied Linear Regression 4th Edition
2018-04-20	attempt	Easy Condition Handling
2018-04-20	BayesSAE	Bayesian Analysis of Small Area Estimation
2018-04-20	binMto	Many-to-One Comparisons of Proportions
2018-04-20	BSagri	Safety Assessment in Agricultural Field Trials
2018-04-20	C443	See a Forest for the Trees
2018-04-20	corpustools	Managing, Querying and Analyzing Tokenized Text
2018-04-20	ctmcmove	Modeling Animal Movement with Continuous-Time Discrete-Space Markov Chains
2018-04-20	dissever	Spatial Downscaling using the Dissever Algorithm
2018-04-20	europepmc	R Interface to the Europe PubMed Central RESTful Web Service
2018-04-20	futile.matrix	Random Matrix Generation and Manipulation
2018-04-20	futile.options	Futile Options Management
2018-04-20	interflex	Multiplicative Interaction Models Diagnostics and Visualization
2018-04-20	mlogit	Multinomial Logit Models
2018-04-20	NetOrigin	Origin Estimation for Propagation Processes on Complex Networks
2018-04-20	pbatR	Pedigree/Family-Based Genetic Association Tests Analysis and Power
2018-04-20	PET	Simulation and Reconstruction of PET Images
2018-04-20	PMA	Penalized Multivariate Analysis
2018-04-20	polywog	Bootstrapped Basis Regression with Oracle Model Selection
2018-04-20	ProjectTemplate	Automates the Creation of New Statistical Analysis Projects
2018-04-20	qlcMatrix	Utility Sparse Matrix Functions for Quantitative Language Comparison
2018-04-20	readxl	Read Excel Files
2018-04-20	RealVAMS	Multivariate VAM Fitting
2018-04-20	RM.weights	Weighted Rasch Modeling and Extensions using Conditional Maximum Likelihood
2018-04-20	semsfa	Semiparametric Estimation of Stochastic Frontier Models
2018-04-20	tawny	Clean Covariance Matrices Using Random Matrix Theory and Shrinkage Estimators for Portfolio Optimization
2018-04-20	tawny.types	Common Types for Tawny
2018-04-20	utilsIPEA	IPEA Common Functions
2018-04-20	utiml	Utilities for Multi-Label Learning
2018-04-20	votesys	Voting Systems, Instant-Runoff Voting, Borda Method, Various Condorcet Methods
2018-04-20	wesanderson	A Wes Anderson Palette Generator
2018-04-20	wiqid	Quick and Dirty Estimates for Wildlife Populations
2018-04-19	AGread	Read Data Files from ActiGraph Monitors
2018-04-19	AMIAS	Alternating Minimization Induced Active Set Algorithms
2018-04-19	BEST	Bayesian Estimation Supersedes the t-Test
2018-04-19	ClusVis	Gaussian-Based Visualization of Gaussian and Non-Gaussian Model-Based Clustering
2018-04-19	coneproj	Primal or Dual Cone Projections with Routines for Constrained Regression
2018-04-19	denseFLMM	Functional Linear Mixed Models for Densely Sampled Data
2018-04-19	FarmSelect	Factor Adjusted Robust Model Selection
2018-04-19	lsbclust	Least-Squares Bilinear Clustering for Three-Way Data
2018-04-19	Matrix.utils	Data.frame-Like Operations on Sparse and Dense Matrix Objects
2018-04-19	mschart	Chart Generation for 'Microsoft Word' and 'Microsoft PowerPoint' Documents
2018-04-19	profileR	Profile Analysis of Multivariate Data in R
2018-04-19	smerc	Statistical Methods for Regional Counts
2018-04-19	SwarmSVM	Ensemble Learning Algorithms Based on Support Vector Machines
2018-04-18	arc	Association Rule Classification
2018-04-18	cptcity	'cpt-city' Colour Gradients
2018-04-18	deBInfer	Bayesian Inference for Differential Equations
2018-04-18	dockerfiler	Easy Dockerfile Creation from R
2018-04-18	DrInsight	Drug Repurposing: Integration and Systematic Investigation of Genomic High Throughput Data
2018-04-18	esmprep	Data Preparation During and After the Use of the Experience Sampling Methodology (ESM)
2018-04-18	GPvam	Maximum Likelihood Estimation of Multiple Membership Mixed Models Used in Value-Added Modeling
2018-04-18	HiCblock	Systematic Analysis of Architectural Proteins and Functional Elements in Blocking Long-Range Contacts Between Loci
2018-04-18	HiCglmi	Probing Factor-Dependent Long-Range Contacts using Regression with Higher-Order Interaction Terms
2018-04-18	MFDFA	MultiFractal Detrended Fluctuation Analysis
2018-04-18	nLTT	Calculate the NLTT Statistic
2018-04-18	pedantics	Functions to Facilitate Power and Sensitivity Analyses for Genetic Studies of Natural Populations
2018-04-18	prodlim	Product-Limit Estimation for Censored Event History Analysis
2018-04-18	rbraries	Interface to the 'Libraries.io' API
2018-04-18	stampr	Spatial Temporal Analysis of Moving Polygons
2018-04-18	thgenetics	Genetic Rare Variants Tests
2018-04-18	TP.idm	Estimation of Transition Probabilities for the Illness-Death Model
2018-04-18	UniDOE	Uniform Design of Experiments
2018-04-18	WhiteStripe	White Matter Normalization for Magnetic Resonance Images using WhiteStripe
2018-04-17	anomalize	Tidy Anomaly Detection
2018-04-17	bioOED	Sensitivity Analysis and Optimum Experiment Design for Microbial Inactivation
2018-04-17	caper	Comparative Analyses of Phylogenetics and Evolution in R
2018-04-17	coxphw	Weighted Estimation in Cox Regression
2018-04-17	genderBR	Predict Gender from Brazilian First Names
2018-04-17	HIBPwned	Bindings for the 'HaveIBeenPwned.com' Data Breach API
2018-04-17	JMbayes	Joint Modeling of Longitudinal and Time-to-Event Data under a Bayesian Approach
2018-04-17	ltm	Latent Trait Models under IRT
2018-04-17	Publish	Format Output of Various Routines in a Suitable Way for Reports and Publication
2018-04-17	qwraps2	Quick Wraps 2
2018-04-17	rvertnet	Search 'Vertnet', a 'Database' of Vertebrate Specimen Records
2018-04-17	Rvmmin	Variable Metric Nonlinear Function Minimization
2018-04-17	uncmbb	UNC Men's Basketball Match Results Since 1949-1950 Season
2018-04-17	vcfR	Manipulate and Visualize VCF Data
2018-04-16	apaText	Create R Markdown Text for Results in the Style of the American Psychological Association (APA)
2018-04-16	aroma.affymetrix	Analysis of Large Affymetrix Microarray Data Sets
2018-04-16	batch	Batching Routines in Parallel and Passing Command-Line Arguments to R
2018-04-16	behavr	Canonical Data Structure for Behavioural Data
2018-04-16	bisect	Estimating Cell Type Composition from Methylation Sequencing Data
2018-04-16	brglm2	Bias Reduction in Generalized Linear Models
2018-04-16	CBDA	Compressive Big Data Analytics
2018-04-16	classiFunc	Classification of Functional Data
2018-04-16	classInt	Choose Univariate Class Intervals
2018-04-16	cond	Approximate Conditional Inference for Logistic and Loglinear Models
2018-04-16	corehunter	Multi-Purpose Core Subset Selection
2018-04-16	csampling	Functions for Conditional Simulation in Regression-Scale Models
2018-04-16	cvcrand	Efficient Design and Analysis of Cluster Randomized Trials
2018-04-16	effectsizescr	Indices for Single-Case Research
2018-04-16	envirem	Generation of ENVIREM Variables
2018-04-16	JM	Joint Modeling of Longitudinal and Survival Data
2018-04-16	loggle	Local Group Graphical Lasso Estimation
2018-04-16	marg	Approximate Marginal Inference for Regression-Scale Models
2018-04-16	newTestSurvRec	Statistical Tests to Compare Curves with Recurrent Events
2018-04-16	NightDay	Night and Day Boundary Plot Function
2018-04-16	nlreg	Higher Order Inference for Nonlinear Heteroscedastic Models
2018-04-16	PCICt	Implementation of POSIXct Work-Alike for 365 and 360 Day Calendars
2018-04-16	riingo	An R Interface to the 'Tiingo' Stock Price API
2018-04-16	RJDBC	Provides Access to Databases Through the JDBC Interface
2018-04-16	rnr	Rosenbaum and Rubin Sensitivity
2018-04-16	SemiPar	Semiparametic Regression
2018-04-16	sGMRFmix	Sparse Gaussian Markov Random Field Mixtures for Anomaly Detection
2018-04-16	SimRepeat	Simulation of Correlated Systems of Equations with Multiple Variable Types
2018-04-15	idbr	R Interface to the US Census Bureau International Data Base API
2018-04-15	meltt	Matching Event Data by Location, Time and Type
2018-04-15	mexhaz	Mixed Effect Excess Hazard Models
2018-04-15	rbacon	Age-Depth Modelling using Bayesian Statistics
2018-04-15	sglg	Fitting Semi-Parametric Generalized log-Gamma Regression Models
2018-04-15	SixSigma	Six Sigma Tools for Quality Control and Improvement
2018-04-14	CensMixReg	Censored Linear Mixture Regression Models
2018-04-14	foghorn	Summarize CRAN Check Results in the Terminal
2018-04-14	influence.SEM	Case Influence in Structural Equation Models
2018-04-14	mlegp	Maximum Likelihood Estimates of Gaussian Processes
2018-04-14	Rprofet	WOE Transformation and Scorecard Builder
2018-04-14	tigris	Load Census TIGER/Line Shapefiles
2018-04-14	yesno	Ask Yes-No Questions
2018-04-13	arm	Data Analysis Using Regression and Multilevel/Hierarchical Models
2018-04-13	clinfun	Clinical Trial Design and Data Analysis Functions
2018-04-13	DBHC	Sequence Clustering with Discrete-Output HMMs
2018-04-13	fpp2	Data for "Forecasting: Principles and Practice" (2nd Edition)
2018-04-13	gldrm	Generalized Linear Density Ratio Models
2018-04-13	GraphPCA	Graphical Tools of Histogram PCA
2018-04-13	gscounts	Group Sequential Designs with Negative Binomial Outcomes
2018-04-13	hydrolinks	Hydrologic Network Linking Data and Tools
2018-04-13	LogConcDEAD	Log-Concave Density Estimation in Arbitrary Dimensions
2018-04-13	lolR	Linear Optimal Low-Rank Projection
2018-04-13	lqmm	Linear Quantile Mixed Models
2018-04-13	mgc	Multiscale Graph Correlation
2018-04-13	MixSIAR	Bayesian Mixing Models in R
2018-04-13	monkeylearn	Accesses the Monkeylearn API for Text Classifiers and Extractors
2018-04-13	MultiVarSel	Variable Selection in a Multivariate Linear Model
2018-04-13	nlirms	Non-Life Insurance Rate-Making System
2018-04-13	nna	Nearest-Neighbor Analysis
2018-04-13	promises	Abstractions for Promise-Based Asynchronous Programming
2018-04-13	Qtools	Utilities for Quantiles
2018-04-13	quantmod	Quantitative Financial Modelling Framework
2018-04-13	salesforcer	An Implementation of 'Salesforce' APIs Using Tidy Principles
2018-04-13	sdat	Signal Detection via Adaptive Test
2018-04-13	StMoMo	Stochastic Mortality Modelling
2018-04-13	survtmle	Compute Targeted Minimum Loss-Based Estimates in Right-Censored Survival Settings
2018-04-13	tsensembler	Dynamic Ensembles for Time Series Forecasting
2018-04-13	waveband	Computes Credible Intervals for Bayesian Wavelet Shrinkage
2018-04-12	aMNLFA	Automated Fitting of Moderated Nonlinear Factor Analysis Through the 'Mplus' Program
2018-04-12	aws.comprehend	'AWS Comprehend' Client Package
2018-04-12	aws.translate	Client for 'AWS Translate'
2018-04-12	bayesammi	Bayesian Estimation of the Additive Main Effects and Multiplicative Interaction Model
2018-04-12	CCM	Correlation Classification Method
2018-04-12	cem	Coarsened Exact Matching
2018-04-12	gimmeTools	Supplemental Tools for the 'gimme' R Package
2018-04-12	indirect	Elicitation of Independent Conditional Means Priors for Generalised Linear Models
2018-04-12	jose	JavaScript Object Signing and Encryption
2018-04-12	labstatR	Libreria Del Laboratorio Di Statistica Con R
2018-04-12	minval	MINimal VALidation for Stoichiometric Reactions
2018-04-12	phyreg	The Phylogenetic Regression of Grafen (1989)
2018-04-12	PowerTOST	Power and Sample Size Based on Two One-Sided t-Tests (TOST) for (Bio)Equivalence Studies
2018-04-12	PreciseSums	Accurate Floating Point Sums and Products
2018-04-12	rtip	Inequality, Welfare and Poverty Indices and Curves using the EU-SILC Data
2018-04-12	sokoban	Sokoban Game
2018-04-12	spc	Statistical Process Control – Calculation of ARL and Other Control Chart Performance Measures
2018-04-12	stratifyR	Optimal Stratification of Univariate Populations
2018-04-11	bioimagetools	Tools for Microscopy Imaging
2018-04-11	di	Deficit Index (DI)
2018-04-11	FindIt	Finding Heterogeneous Treatment Effects
2018-04-11	GroupSeq	A GUI-Based Program to Compute Probabilities Regarding Group Sequential Designs
2018-04-11	haplo.stats	Statistical Analysis of Haplotypes with Traits and Covariates when Linkage Phase is Ambiguous
2018-04-11	irrNA	Coefficients of Interrater Reliability - Generalized for Randomly Incomplete Datasets
2018-04-11	loo	Efficient Leave-One-Out Cross-Validation and WAIC for Bayesian Models
2018-04-11	lubridate	Make Dealing with Dates a Little Easier
2018-04-11	MIRL	Multiple Imputation Random Lasso for Variable Selection with Missing Entries
2018-04-11	RSurvey	Geographic Information System Application
2018-04-11	snpReady	Preparing Genotypic Datasets in Order to Run Genomic Analysis
2018-04-11	sparsepca	Sparse Principal Component Analysis (SPCA)
2018-04-11	splitFeas	Multi-Set Split Feasibility
2018-04-11	webdriver	'WebDriver' Client for 'PhantomJS'
2018-04-10	fasta	Fast Adaptive Shrinkage/Thresholding Algorithm
2018-04-10	FeatureHashing	Creates a Model Matrix via Feature Hashing with a Formula Interface
2018-04-10	fluoSurv	Estimate Insect Survival from Fluorescence Data
2018-04-10	glmmsr	Fit a Generalized Linear Mixed Model
2018-04-10	GLMsData	Generalized Linear Model Data Sets
2018-04-10	MarginalMediation	Marginal Mediation
2018-04-10	mcglm	Multivariate Covariance Generalized Linear Models
2018-04-10	mispr	Multiple Imputation with Sequential Penalized Regression
2018-04-10	mknapsack	Multiple Knapsack Problem Solver
2018-04-10	multisensi	Multivariate Sensitivity Analysis
2018-04-10	mycor	Automatic Correlation and Regression Test in a 'data.frame'
2018-04-10	nmw	Understanding Nonlinear Mixed Effects Modeling for Population Pharmacokinetics
2018-04-10	RNGforGPD	Random Number Generation for Generalized Poisson Distributions
2018-04-10	RSAlgaeR	Builds Empirical Remote Sensing Models of Water Quality Variables and Analyzes Long-Term Trends
2018-04-10	scriptName	Determine a Script's Filename from Within the Script Itself
2018-04-10	SGPdata	Exemplar Data Sets for Student Growth Percentiles (SGP) Analyses
2018-04-10	swmmr	R Interface for US EPA's SWMM
2018-04-10	VSURF	Variable Selection Using Random Forests
2018-04-09	AnnotationBustR	Extract Subsequences from GenBank Annotations
2018-04-09	aws.transcribe	Client for 'AWS Transcribe'
2018-04-09	cluster	"Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al.
2018-04-09	essHist	The Essential Histogram
2018-04-09	esvis	Visualization and Estimation of Effect Sizes
2018-04-09	IGG	Inverse Gamma-Gamma
2018-04-09	kdecopula	Kernel Smoothing for Bivariate Copula Densities
2018-04-09	loggit	Effortless Exception Logging
2018-04-09	mapmisc	Utilities for Producing Maps
2018-04-09	MargCond	Joint Marginal-Conditional Model
2018-04-09	MBSP	Multivariate Bayesian Model with Shrinkage Priors
2018-04-09	mclcar	Estimating Conditional Auto-Regressive (CAR) Models using Monte Carlo Likelihood Methods
2018-04-09	mstate	Data Preparation, Estimation and Prediction in Multi-State Models
2018-04-09	MultiVarMI	Multiple Imputation for Multivariate Data
2018-04-09	mvPot	Multivariate Peaks-over-Threshold Modelling for Spatial Extreme Events
2018-04-09	OptimClassifier	Create the Best Train for Classification Models
2018-04-09	PlackettLuce	Plackett-Luce Models for Rankings
2018-04-09	R.filesets	Easy Handling of and Access to Files Organized in Structured Directories
2018-04-09	rdfp	An Implementation of the 'DoubleClick for Publishers' API
2018-04-09	rfm	Recency, Frequency and Monetary Value Analysis
2018-04-09	RiverBuilder	River Generation for Given Data Sets
2018-04-09	SentimentAnalysis	Dictionary-Based Sentiment Analysis
2018-04-09	shuffleCI	Confidence Intervals Compared via Shuffling
2018-04-09	spc4sts	Statistical Process Control for Stochastic Textured Surfaces
2018-04-09	textstem	Tools for Stemming and Lemmatizing Text
2018-04-08	amelie	Anomaly Detection with Normal Probability Functions
2018-04-08	equate	Observed-Score Linking and Equating
2018-04-08	ggconf	Simpler Appearance Modification of 'ggplot2'
2018-04-08	liureg	Liu Regression with Liu Biasing Parameters and Statistics
2018-04-08	lmSupport	Support for Linear Models
2018-04-08	MixAll	Clustering and Classification using Model-Based Mixture Models
2018-04-08	nlnet	Nonlinear Network Reconstruction, Clustering, and Variable Selection Based on DCOL (Distance Based on Conditional Ordered List)
2018-04-08	proxy	Distance and Similarity Measures
2018-04-08	rankdist	Distance Based Ranking Models
2018-04-08	ReinforcementLearning	Model-Free Reinforcement Learning
2018-04-08	tint	'tint' is not 'Tufte'
2018-04-07	bnpmr	Bayesian Monotonic Nonparametric Regression
2018-04-07	nlme	Linear and Nonlinear Mixed Effects Models
2018-04-07	streamMOA	Interface for MOA Stream Clustering Algorithms
2018-04-07	webchem	Chemical Information from the Web
2018-04-07	zoib	Bayesian Inference for Beta Regression and Zero-or-One Inflated Beta Regression
2018-04-06	accelmissing	Missing Value Imputation for Accelerometer Data
2018-04-06	alfred	Downloading Time Series from ALFRED Database for Various Vintages
2018-04-06	Anthropometry	Statistical Methods for Anthropometric Data
2018-04-06	ARTP	Gene and Pathway p-Values Computed using the Adaptive Rank Truncated Product
2018-04-06	BayesRS	Bayes Factors for Hierarchical Linear Models with Continuous Predictors
2018-04-06	costat	Time Series Costationarity Determination
2018-04-06	CustomerScoringMetrics	Evaluation Metrics for Customer Scoring Models Depending on Binary Classifiers
2018-04-06	dggridR	Discrete Global Grids
2018-04-06	eply	Apply a Function Over Expressions
2018-04-06	flam	Fits Piecewise Constant Models with Data-Adaptive Knots
2018-04-06	flexmet	Flexible Latent Trait Metrics using the Filtered Monotonic Polynomial Item Response Model
2018-04-06	gapfill	Fill Missing Values in Satellite Data
2018-04-06	gmfd	Inference and Clustering of Functional Data
2018-04-06	hbmem	Hierarchical Bayesian Analysis of Recognition Memory
2018-04-06	konfound	Quantify the Robustness of Causal Inferences
2018-04-06	MHTcop	Tests Controlling the FDR / FWER under Certain Copula Models
2018-04-06	mueRelativeRisk	Relative Risk Based on the Ratio of Median Unbiased Estimates
2018-04-06	RRphylo	Phylogenetic Ridge Regression Methods for Comparative Studies
2018-04-06	rtop	Interpolation of Data with Variable Spatial Support
2018-04-06	RWildbook	Interface for the 'Wildbook' Wildlife Data Management Framework
2018-04-06	selectr	Translate CSS Selectors to XPath Expressions
2018-04-06	stepR	Multiscale Change-Point Inference
2018-04-05	ANOVA.TFNs	One-Way Analysis of Variance Based on Triangular Fuzzy Numbers
2018-04-05	autoFRK	Automatic Fixed Rank Kriging
2018-04-05	BayesESS	Determining Effective Sample Size
2018-04-05	bsplus	Adds Functionality to the R Markdown + Shiny Bootstrap Framework
2018-04-05	CISE	Common and Individual Structure Explained for Multiple Graphs
2018-04-05	corrDNA	Finding Associations in Position-Wise Aligned DNA Sequence Dataset
2018-04-05	DTDA.ni	Doubly Truncated Data Analysis, Non Iterative
2018-04-05	DTRlearn	Learning Algorithms for Dynamic Treatment Regimes
2018-04-05	GAMens	Applies GAMbag, GAMrsm and GAMens Ensemble Classifiers for Binary Classification
2018-04-05	irtDemo	Item Response Theory Demo Collection
2018-04-05	kernplus	A Kernel Regression-Based Multidimensional Wind Turbine Power Curve
2018-04-05	numbersBR	Validate, Compare and Format Identification Numbers from Brazil
2018-04-05	pbdSLAP	Programming with Big Data – Scalable Linear Algebra Packages
2018-04-05	prepplot	Prepare Figure Region for Base Graphics
2018-04-05	qtlhot	Inference for QTL Hotspots
2018-04-05	qtlnet	Causal Inference of QTL Networks
2018-04-05	RcmdrPlugin.EZR	R Commander Plug-in for the EZR (Easy R) Package
2018-04-05	SnakesAndLaddersAnalysis	Play and Analyse the Game of Snakes and Ladders
2018-04-05	subplex	Unconstrained Optimization using the Subplex Algorithm
2018-04-05	SurfaceTortoise	Find Optimal Sampling Locations Based on Spatial Covariate(s)
2018-04-05	TVsMiss	Variable Selection for Missing Data
2018-04-05	x3ptools	Tools for Working with 3D Surface Measurements
2018-04-05	XLConnect	Excel Connector for R
2018-04-05	XLConnectJars	JAR Dependencies for the XLConnect Package
2018-04-04	apTreeshape	Analyses of Phylogenetic Treeshape
2018-04-04	bigKRLS	Optimized Kernel Regularized Least Squares
2018-04-04	cosa	Constrained Optimal Sample Allocation
2018-04-04	data.world	Functions and Add-Ins for Working with 'data.world' Data Sets and Projects
2018-04-04	EffectStars	Visualization of Categorical Response Models
2018-04-04	EffectStars2	Effect Stars
2018-04-04	factorMerger	The Merging Path Plot
2018-04-04	ForestTools	Analyzing Remotely Sensed Forest Data
2018-04-04	ggExtra	Add Marginal Histograms to 'ggplot2', and More 'ggplot2' Enhancements
2018-04-04	HistData	Data Sets from the History of Statistics and Data Visualization
2018-04-04	humanize	Create Values for Human Consumption
2018-04-04	lmtest	Testing Linear Regression Models
2018-04-04	matlib	Matrix Functions for Teaching and Learning Linear Algebra and Multivariate Statistics
2018-04-04	powerbydesign	Power Estimates for ANOVA Designs
2018-04-04	scagnostics	Compute scagnostics - scatterplot diagnostics
2018-04-04	systemfit	Estimating Systems of Simultaneous Equations
2018-04-03	APfun	Geo-Processing Helper Functions
2018-04-03	archiDART	Plant Root System Architecture Analysis Using DART and RSML Files
2018-04-03	bio3d	Biological Structure Analysis
2018-04-03	CollessLike	Distribution and Percentile of Sackin, Cophenetic and Colless-Like Balance Indices of Phylogenetic Trees
2018-04-03	desplot	Plotting Field Plans for Agricultural Experiments
2018-04-03	EMMIXgene	A Mixture Model-Based Approach to the Clustering of Microarray Expression Data
2018-04-03	epidata	Tools to Retrieve Economic Policy Institute Data Library Extracts
2018-04-03	fmsb	Functions for Medical Statistics Book with some Demographic Data
2018-04-03	gridGraphics	Redraw Base Graphics Using 'grid' Graphics
2018-04-03	heplots	Visualizing Hypothesis Tests in Multivariate Linear Models
2018-04-03	maps	Draw Geographical Maps
2018-04-03	MortalityTables	A Framework for Various Types of Mortality / Life Tables
2018-04-03	panelvar	Panel Vector Autoregression
2018-04-03	pollstR	Client for the HuffPost Pollster API
2018-04-03	Power2Stage	Power and Sample-Size Distribution of 2-Stage Bioequivalence Studies
2018-04-03	RSCABS	Rao-Scott Cochran-Armitage by Slices Trend Test
2018-04-03	SSrat	Two-Dimensional Sociometric Status Determination with Rating Scales
2018-04-03	UncertainInterval	Uncertain Interval Methods for Cut-Point Determination in Tests
2018-04-02	Bivariate.Pareto	Bivariate Pareto Models
2018-04-02	dfoptim	Derivative-Free Optimization
2018-04-02	GFGM.copula	Generalized Farlie-Gumbel-Morgenstern Copula
2018-04-02	glmnet	Lasso and Elastic-Net Regularized Generalized Linear Models
2018-04-02	negenes	Estimating the Number of Essential Genes in a Genome
2018-04-02	network	Classes for Relational Data
2018-04-02	SpatMCA	Regularized Spatial Maximum Covariance Analysis
2018-04-02	usfertilizer	County-Level Estimates of Fertilizer Application in USA
2018-04-01	AssetPricing	Optimal Pricing of Assets with Fixed Expiry Date
2018-04-01	deldir	Delaunay Triangulation and Dirichlet (Voronoi) Tessellation
2018-04-01	gamsel	Fit Regularization Path for Generalized Additive Models
2018-04-01	gb	Generalize Lambda Distribution and Generalized Bootstrapping
2018-04-01	geecure	Marginal Proportional Hazards Mixture Cure Models with Generalized Estimating Equations
2018-04-01	ICSShiny	ICS via a Shiny Application
2018-04-01	metaplus	Robust Meta-Analysis and Meta-Regression
2018-04-01	rGroovy	Groovy Language Integration
2018-04-01	sparseFLMM	Functional Linear Mixed Models for Irregularly or Sparsely Sampled Data
2018-03-31	cvequality	Tests for the Equality of Coefficients of Variation from Multiple Groups
2018-03-31	growfunctions	Bayesian Non-Parametric Dependent Models for Time-Indexed Functional Data
2018-03-30	ads	Spatial Point Patterns Analysis
2018-03-30	errorlocate	Locate Errors with Validation Rules
2018-03-30	geojsonio	Convert Data from and to 'GeoJSON' or 'TopoJSON'
2018-03-30	inegiR	Integrate INEGI’s (Mexican Stats Office) API with R
2018-03-30	learningCurve	An Implementation of Crawford's and Wright's Learning Curve Production Functions
2018-03-30	mapdata	Extra Map Databases
2018-03-30	marked	Mark-Recapture Analysis for Survival and Abundance Estimation
2018-03-30	mixreg	Functions to Fit Mixtures of Regressions
2018-03-30	mstR	Procedures to Generate Patterns under Multistage Testing
2018-03-30	normalr	Normalisation of Multiple Variables in Large-Scale Datasets
2018-03-30	radiomics	'Radiomic' Image Processing Toolbox
2018-03-30	spcosa	Spatial Coverage Sampling and Random Sampling from Compact Geographical Strata
2018-03-29	bindrcpp	An 'Rcpp' Interface to Active Bindings
2018-03-29	geofacet	'ggplot2' Faceting Utilities for Geographical Data
2018-03-29	jdx	'Java' Data Exchange for 'R' and 'rJava'
2018-03-29	lcyanalysis	Stock Data Analysis Functions
2018-03-29	LTRCtrees	Survival Trees to Fit Left-Truncated and Right-Censored and Interval-Censored Survival Data
2018-03-29	mapproj	Map Projections
2018-03-29	nmathresh	Thresholds and Invariant Intervals for Network Meta-Analysis
2018-03-29	phantom	Gene Set Pareto Heterogeneity Analysis of Time-Course Gene Expression Data
2018-03-29	RQDA	Qualitative Data Analysis
2018-03-29	SeqKat	Detection of Kataegis
2018-03-29	TipDatingBeast	Using Tip Dates with Phylogenetic Trees in BEAST (Software for Phylogenetic Analysis)
2018-03-29	tokenizers	Fast, Consistent Tokenization of Natural Language Text
2018-03-29	USAboundaries	Historical and Contemporary Boundaries of the United States of America
2018-03-29	viridis	Default Color Maps from 'matplotlib'
2018-03-29	wellknown	Convert Between 'WKT' and 'GeoJSON'
2018-03-28	curl	A Modern and Flexible Web Client for R
2018-03-28	encode	Represent Ordered Lists and Pairs as Strings
2018-03-28	EpiILMCT	Continuous Time Distance-Based and Network-Based Individual Level Models for Epidemics
2018-03-28	InjurySeverityScore	Translate ICD-9 into Injury Severity Score
2018-03-28	postGIStools	Tools for Interacting with 'PostgreSQL' / 'PostGIS' Databases
2018-03-28	productivity	Indices of Productivity Using Data Envelopment Analysis (DEA)
2018-03-28	rgl	3D Visualization Using OpenGL
2018-03-28	SubTite	Subgroup Specific Optimal Dose Assignment
2018-03-28	VennDiagram	Generate High-Resolution Venn and Euler Plots
2018-03-27	ARHT	Adaptable Regularized Hotelling's T^2 Test for High-Dimensional Data
2018-03-27	aws.alexa	Client for the Amazon Alexa Web Information Services API
2018-03-27	bairt	Bayesian Analysis of Item Response Theory Models
2018-03-27	config	Manage Environment Specific Configuration Values
2018-03-27	constellation	Identify Event Sequences Using Time Series Joins
2018-03-27	dfmeta	Meta-Analysis of Phase I Dose-Finding Early Clinical Trials
2018-03-27	dfped	Extrapolation and Bridging of Adult Information in Early Phase Dose-Finding Paediatrics Studies
2018-03-27	dynprog	Dynamic Programming Domain-Specific Language
2018-03-27	ggdag	Analyze and Create Elegant Directed Acyclic Graphs
2018-03-27	saeRobust	Robust Small Area Estimation
2018-03-27	semPower	Power Analyses for SEM
2018-03-27	shinycustomloader	Custom Loader for Shiny Outputs
2018-03-27	spaceNet	Latent Space Models for Multidimensional Networks
2018-03-27	sparseHessianFD	Numerical Estimation of Sparse Hessians
2018-03-27	sperrorest	Perform Spatial Error Estimation and Variable Importance in Parallel
2018-03-27	ssc	Semi-Supervised Classification Methods
2018-03-27	trustOptim	Trust Region Optimization for Nonlinear Functions with Sparse Hessians
2018-03-27	tsfknn	Time Series Forecasting Using Nearest Neighbors
2018-03-27	validatetools	Checking and Simplifying Validation Rule Sets
2018-03-26	BoltzMM	Boltzmann Machines with MM Algorithms
2018-03-26	datr	'Dat' Protocol Interface
2018-03-26	degreenet	Models for Skewed Count Distributions Relevant to Networks
2018-03-26	hts	Hierarchical and Grouped Time Series
2018-03-26	phenomap	Projecting Satellite-Derived Phenology in Space
2018-03-26	PwrGSD	Power in a Group Sequential Design
2018-03-26	quotedargs	A Way of Writing Functions that Quote their Arguments
2018-03-26	ramps	Bayesian Geostatistical Modeling with RAMPS
2018-03-26	simTool	Conduct Simulation Studies with a Minimal Amount of Source Code
2018-03-26	sparseMVN	Multivariate Normal Functions for Sparse Covariance and Precision Matrices
2018-03-25	berryFunctions	Function Collection Related to Plotting and Hydrology
2018-03-25	blob	A Simple S3 Class for Representing Vectors of Binary Data ('BLOBS')
2018-03-25	flare	Family of Lasso Regression
2018-03-25	glmmML	Generalized Linear Models with Clustering
2018-03-25	interp	Interpolation Methods
2018-03-25	mefa4	Multivariate Data Handling with S4 Classes and Sparse Matrices
2018-03-25	orthoDr	An Orthogonality Constrained Optimization Approach for Semi-Parametric Dimension Reduction Problems
2018-03-25	plogr	The 'plog' C++ Logging Library
2018-03-25	randomForest	Breiman and Cutler's Random Forests for Classification and Regression
2018-03-25	symbolicDA	Analysis of Symbolic Data
2018-03-25	tabuSearch	Tabu Search Algorithm for Binary Configurations
2018-03-25	tmle	Targeted Maximum Likelihood Estimation
2018-03-25	windfarmGA	Genetic Algorithm for Wind Farm Layout Optimization
2018-03-24	DMRnet	Delete or Merge Regressors Algorithms for Linear and Logistic Model Selection and High-Dimensional Data
2018-03-23	boxoffice	Downloads Box Office Information for Given Dates
2018-03-23	BSL	Bayesian Synthetic Likelihood with Graphical Lasso
2018-03-23	diagmeta	Meta-Analysis of Diagnostic Accuracy Studies with Several Cutpoints
2018-03-23	fcros	A Method to Search for Differentially Expressed Genes and to Detect Recurrent Chromosomal Copy Number Aberrations
2018-03-23	fmlogcondens	Fast Multivariate Log-Concave Density Estimation
2018-03-23	h2o4gpu	Interface to 'H2O4GPU'
2018-03-23	ioncopy	Calling Copy Number Alterations in Amplicon Sequencing Data
2018-03-23	itcSegment	Individual Tree Crowns Segmentation
2018-03-23	lineup	Lining Up Two Sets of Measurements
2018-03-23	miLineage	Association Tests for Microbial Lineages on a Taxonomic Tree
2018-03-23	netmeta	Network Meta-Analysis using Frequentist Methods
2018-03-23	NormalizeMets	Analysis of Metabolomics Data
2018-03-23	polySegratioMM	Bayesian Mixture Models for Marker Dosage in Autopolyploids
2018-03-23	Rclean	A Tool for Writing Cleaner, more Transparent Code
2018-03-23	rglobi	R Interface to Global Biotic Interactions
2018-03-23	RunuranGUI	A GUI for the UNU.RAN Random Variate Generators
2018-03-23	sfdct	Constrained Triangulation for Simple Features
2018-03-23	STV	Single Transferable Vote Counting
2018-03-23	swagger	Dynamically Generates Documentation from a 'Swagger' Compliant API
2018-03-23	SYNCSA	Analysis of Functional and Phylogenetic Patterns in Metacommunities
2018-03-23	ZIBBSeqDiscovery	Zero-Inflated Beta-Binomial Modeling of Microbiome Count Data
2018-03-22	DPWeibull	Dirichlet Process Weibull Mixture Model for Survival Data
2018-03-22	eaf	Plots of the Empirical Attainment Function
2018-03-22	ensembleMOS	Ensemble Model Output Statistics
2018-03-22	fasterize	Fast Polygon to Raster Conversion
2018-03-22	GPGame	Solving Complex Game Problems using Gaussian Processes
2018-03-22	hsm	A Path-Based BCD for Proximal Function of Latent Group Lasso
2018-03-22	KappaGUI	An R-Shiny Application for Calculating Cohen's and Fleiss' Kappa
2018-03-22	MCPAN	Multiple Comparisons Using Normal Approximation
2018-03-22	MED	Mediation by Tilted Balancing
2018-03-22	Momocs	Morphometrics using R
2018-03-22	multilevelPSA	Multilevel Propensity Score Analysis
2018-03-22	polySegratio	Simulate and Test Marker Dosage for Dominant Markers in Autopolyploids
2018-03-22	R3port	Report Functions to Create HTML and PDF Files
2018-03-22	rreg	Visualization for Norwegian Health Quality Registries
2018-03-22	SetTest	Group Testing Procedures for Signal Detection and Goodness-of-Fit
2018-03-22	SympluR	Analyze Healthcare Social Media Data from the 'Symplur' API
2018-03-21	AdapSamp	Adaptive Sampling Algorithms
2018-03-21	crqanlp	Cross-Recurrence Quantification Analysis for Dynamic Natural Language Processing
2018-03-21	horserule	Flexible Non-Linear Regression with the HorseRule Algorithm
2018-03-21	incR	Analysis of Incubation Data
2018-03-21	koRpus.lang.en	Language Support for 'koRpus' Package: English
2018-03-21	mapr	Visualize Species Occurrence Data
2018-03-21	NEArender	Network Enrichment Analysis
2018-03-21	nlr	Nonlinear Regression Modelling using Robust Methods
2018-03-21	NOAAWeather	Get Weather Data from NOAA Weather Stations
2018-03-21	purging	Simple Method for Purging Mediation Effects among Independent Variables
2018-03-21	rforensicbatwing	BATWING for Calculating Forensic Trace-Suspect Match Probabilities
2018-03-21	Ricetl	Data Extraction for People's Republic of China Resident Identity Card
2018-03-21	rjazz	Official Client for 'Jazz'
2018-03-21	RNRCS	Download NRCS Data
2018-03-21	SPINA	Structure Parameter Inference Approach
2018-03-21	spls	Sparse Partial Least Squares (SPLS) Regression and Classification
2018-03-21	TFisher	Optimal Thresholding Fisher's P-Value Combination Method
2018-03-20	benthos	Marine Benthic Ecosystem Analysis
2018-03-20	catdap	Categorical Data Analysis Program Package
2018-03-20	ciuupi	Confidence Intervals Utilizing Uncertain Prior Information
2018-03-20	descriptr	Generate Descriptive Statistics & Explore Statistical Distributions
2018-03-20	eventdataR	Event Data Repository
2018-03-20	evir	Extreme Values in R
2018-03-20	fastmaRching	Fast Marching Method for Modelling Evolving Boundaries
2018-03-20	fsthet	Fst-Heterozygosity Smoothed Quantiles
2018-03-20	genlogis	Generalized Logistic Distribution
2018-03-20	grImport2	Importing 'SVG' Graphics
2018-03-20	HistDAWass	Histogram-Valued Data Analysis
2018-03-20	multipol	Multivariate Polynomials
2018-03-20	Oarray	Arrays with Arbitrary Offsets
2018-03-20	PHYLOGR	Functions for Phylogenetically Based Statistical Analyses
2018-03-20	PrivateLR	Differentially Private Regularized Logistic Regression
2018-03-20	rarhsmm	Regularized Autoregressive Hidden Semi Markov Model
2018-03-20	rmeta	Meta-Analysis
2018-03-20	SpatialPack	Tools for Assessment the Association Between Two Spatial Processes
2018-03-20	spnn	Scale Invariant Probabilistic Neural Networks
2018-03-20	Tmisc	Turner Miscellaneous
2018-03-20	VWPre	Tools for Preprocessing Visual World Data
2018-03-19	actuar	Actuarial Functions and Heavy Tailed Distributions
2018-03-19	CIEE	Estimating and Testing Direct Effects in Directed Acyclic Graphs using Estimating Equations
2018-03-19	cotrend	Consistant Cotrend Rank Selection
2018-03-19	dbmss	Distance-Based Measures of Spatial Structures
2018-03-19	DGVM3D	3D Forest Simulation Visualization Tool
2018-03-19	dyn	Time Series Regression
2018-03-19	gamRR	Calculate the RR for the GAM
2018-03-19	klaR	Classification and Visualization
2018-03-19	metScanR	Find, Map, and Gather Environmental Data and Metadata
2018-03-19	NScluster	Simulation and Estimation of the Neyman-Scott Type Spatial Cluster Models
2018-03-19	ppsbm	Clustering in Longitudinal Networks
2018-03-19	ROlogit	Fit Rank-Ordered Logit (RO-Logit) Model
2018-03-19	RSSampling	Ranked Set Sampling
2018-03-19	sylly.en	Language Support for 'sylly' Package: English
2018-03-19	TwoRegression	Process Data from Wearable Research Devices Using Two-Regression Algorithms
2018-03-19	untb	Ecological Drift under the UNTB
2018-03-18	bcgam	Bayesian Constrained Generalised Linear Models
2018-03-18	denstrip	Density Strips and Other Methods for Compactly Illustrating Distributions
2018-03-18	g2f	Find and Fill Gaps in Metabolic Networks
2018-03-18	hierNet	A Lasso for Hierarchical Interactions
2018-03-18	LearnBayes	Functions for Learning Bayesian Inference
2018-03-18	longclust	Model-Based Clustering and Classification for Longitudinal Data
2018-03-18	msme	Functions and Datasets for "Methods of Statistical Model Estimation"
2018-03-18	pgmm	Parsimonious Gaussian Mixture Models
2018-03-18	QuantTools	Enhanced Quantitative Trading Modelling
2018-03-18	RcppSMC	Rcpp Bindings for Sequential Monte Carlo
2018-03-18	Rgb	The R Genome Browser
2018-03-18	Rgretl	Interface to 'gretlcli'
2018-03-18	smatr	(Standardised) Major Axis Estimation and Testing Routines
2018-03-18	WaveletComp	Computational Wavelet Analysis
2018-03-18	XR	A Structure for Interfaces from R
2018-03-18	XRJulia	Structured Interface to Julia
2018-03-17	datetime	Nominal Dates, Times, and Durations
2018-03-17	dispmod	Modelling Dispersion in GLM
2018-03-17	OPDOE	Optimal Design of Experiments
2018-03-17	orclus	Subspace Clustering Based on Arbitrarily Oriented Projected Cluster Generation
2018-03-17	popdemo	Demographic Modelling Using Projection Matrices
2018-03-17	rootWishart	Distribution of Largest Root for Single and Double Wishart Settings
2018-03-17	splithalf	Calculate Task Split Half Reliability Estimates
2018-03-17	survidm	Inference and Prediction in an Illness-Death Model
2018-03-17	tree	Classification and Regression Trees
2018-03-17	wpp2017	World Population Prospects 2017
2018-03-16	beast	Bayesian Estimation of Change-Points in the Slope of Multivariate Time-Series
2018-03-16	deltaPlotR	Identification of Dichotomous Differential Item Functioning (DIF) using Angoff's Delta Plot Method
2018-03-16	diffractometry	Baseline Identification and Peak Decomposition for x-Ray Diffractograms
2018-03-16	EthSEQ	Ethnicity Annotation from Whole Exome Sequencing Data
2018-03-16	fitPoly	Genotype Calling for Bi-Allelic Marker Assays
2018-03-16	glogis	Fitting and Testing Generalized Logistic Distributions
2018-03-16	gsubfn	Utilities for Strings and Function Arguments
2018-03-16	lfactors	Factors with Levels
2018-03-16	MCDA	Functions to Support the Multicriteria Decision Aiding Process
2018-03-16	metaviz	Forest Plots, Funnel Plots, and Visual Funnel Plot Inference for Meta-Analysis
2018-03-16	mlbstats	Major League Baseball Player Statistics Calculator
2018-03-16	MonteCarlo	Automatic Parallelized Monte Carlo Simulations
2018-03-16	NetworkExtinction	Extinction Simulation in Food Webs
2018-03-16	petitr	Relative Growth Rate
2018-03-16	QRegVCM	Quantile Regression in Varying-Coefficient Models
2018-03-16	rMEA	Synchrony in Motion Energy Analysis (MEA) Time-Series
2018-03-16	sparsebnUtils	Utilities for Learning Sparse Bayesian Networks
2018-03-16	sphet	Estimation of Spatial Autoregressive Models with and without Heteroscedasticity
2018-03-16	synbreed	Framework for the Analysis of Genomic Prediction Data using R
2018-03-16	tractor.base	Read, Manipulate and Visualise Magnetic Resonance Images
2018-03-15	esaps	Indicators of Electoral Systems and Party Systems
2018-03-15	gmm	Generalized Method of Moments and Generalized Empirical Likelihood
2018-03-15	gSeg	Graph-Based Change-Point Detection (g-Segmentation)
2018-03-15	paramGUI	A Shiny GUI for some Parameter Estimation Examples
2018-03-15	pastecs	Package for Analysis of Space-Time Ecological Series
2018-03-15	RcppClassicExamples	Examples using 'RcppClassic' to Interface R and C++
2018-03-15	RDieHarder	R Interface to the 'DieHarder' RNG Test Suite
2018-03-15	rdlocrand	Local Randomization Methods for RD Designs
2018-03-15	wheatmap	Incrementally Build Complex Plots using Natural Semantics
2018-03-15	withr	Run Code 'With' Temporarily Modified Global State
2018-03-14	adaptiveGPCA	Adaptive Generalized PCA
2018-03-14	AmigaFFH	Commodore Amiga File Format Handler
2018-03-14	bcmaps	Map Layers and Spatial Utilities for British Columbia
2018-03-14	corregp	Functions and Methods for Correspondence Regression
2018-03-14	CoxPhLb	Analyzing Right-Censored Length-Biased Data
2018-03-14	funnelR	Funnel Plots for Proportion Data
2018-03-14	genogeographer	Methods for Analysing Forensic Ancestry Informative Markers
2018-03-14	gfmR	Implements Group Fused Multinomial Regression
2018-03-14	ggQQunif	Compare Big Datasets to the Uniform Distribution
2018-03-14	gim	Generalized Integration Model
2018-03-14	higrad	Statistical Inference for Online Learning and Stochastic Approximation via HiGrad
2018-03-14	hmmm	Hierarchical Multinomial Marginal Models
2018-03-14	maxadjAUC	Maximizing the Adjusted AUC
2018-03-14	ordinalRR	Analysis of Repeatability and Reproducibility Studies with Ordinal Measurements
2018-03-14	patentsview	An R Client to the 'PatentsView' API
2018-03-14	pmxTools	Pharmacometric and Pharmacokinetic Toolkit
2018-03-14	pyinit	Pena-Yohai Initial Estimator for Robust S-Regression
2018-03-14	RH2	DBI/RJDBC Interface to H2 Database
2018-03-14	ridittools	Useful Functions for Ridit Analysis
2018-03-14	rLakeAnalyzer	Lake Physics Tools
2018-03-14	scatterplot3d	3D Scatter Plot
2018-03-14	SensMixed	Analysis of Sensory and Consumer Data in a Mixed Model Framework
2018-03-14	tidyboot	Tidyverse-Compatible Bootstrapping
2018-03-14	vstsr	Access to Visual Studio Team Services API via R
2018-03-14	wordbankr	Accessing the Wordbank Database
2018-03-14	WufooR	R Wrapper for the 'Wufoo.com' - The Form Building Service
2018-03-14	zipfextR	Zipf Extended Distributions
2018-03-13	abnormality	Measure a Subject's Abnormality with Respect to a Reference Population
2018-03-13	AnglerCreelSurveySimulation	Simulate a Bus Route Creel Survey of Anglers
2018-03-13	assignPOP	Population Assignment using Genetic, Non-Genetic or Integrated Data in a Machine Learning Framework
2018-03-13	baystability	Bayesian Stability Analysis of Genotype by Environment Interaction (GEI)
2018-03-13	bindr	Parametrized Active Bindings
2018-03-13	BKPC	Bayesian Kernel Projection Classifier
2018-03-13	crmPack	Object-Oriented Implementation of CRM Designs
2018-03-13	Dominance	A Package to Calculate and Visualize Dominance Hierarchies
2018-03-13	fcr	Functional Concurrent Regression for Sparse Data
2018-03-13	findR	Find Code Snippets, R Scripts, R Markdown, PDF and Text Files with Pattern Matching
2018-03-13	genBart	Generate 'BART' File
2018-03-13	Modelcharts	Classification Model Charts
2018-03-13	readit	Effortlessly Read Any Rectangular Data
2018-03-13	RM2006	RiskMetrics 2006 Methodology
2018-03-13	winRatioAnalysis	Estimates the Win-Ratio as a Function of Time
2018-03-12	bdots	Bootstrapped Differences of Time Series
2018-03-12	inTrees	Interpret Tree Ensembles
2018-03-12	osrm	Interface Between R and the OpenStreetMap-Based Routing Service OSRM
2018-03-12	pacotest	Testing for Partial Copulas and the Simplifying Assumption in Vine Copulas
2018-03-12	pgirmess	Spatial Analysis and Data Mining for Field Ecologists
2018-03-12	ruv	Detect and Remove Unwanted Variation using Negative Controls
2018-03-12	stranger	Simple Toolkit in R for ANomalies Get, Explain and Report
2018-03-12	TimeVTree	Survival Analysis of Time Varying Coefficients Using a Tree-Based Approach
2018-03-12	xtractomatic	Accessing Environmental Data from ERD's ERDDAP Server
2018-03-11	aniDom	Inferring Dominance Hierarchies and Estimating Uncertainty
2018-03-11	cmm	Categorical Marginal Models
2018-03-11	gfer	Green Finance and Environmental Risk
2018-03-11	pense	Penalized Elastic Net S/MM-Estimator of Regression
2018-03-11	widyr	Widen, Process, then Re-Tidy Data
2018-03-10	datetimeutils	Utilities for Dates and Times
2018-03-10	hms	Pretty Time of Day
2018-03-10	ICSNP	Tools for Multivariate Nonparametrics
2018-03-10	PoisNonNor	Simultaneous Generation of Count and Continuous Data
2018-03-10	properties	Parse 'Java' Properties Files for 'R Service Bus' Applications
2018-03-10	Rcriticor	Pierre-Goldwin Correlogram
2018-03-10	relaimpo	Relative Importance of Regressors in Linear Models
2018-03-10	rmonad	A Monadic Pipeline System
2018-03-10	scatterD3	D3 JavaScript Scatterplot from R
2018-03-10	sim1000G	Genotype Simulations for Rare or Common Variants Using Haplotypes from 1000 Genomes
2018-03-09	circglmbayes	Bayesian Analysis of a Circular GLM
2018-03-09	cronR	Schedule R Scripts and Processes with the 'cron' Job Scheduler
2018-03-09	EpiILM	Spatial and Network Based Individual Level Models for Epidemics
2018-03-09	FASeg	Joint Segmentation of Correlated Time Series
2018-03-09	glm.deploy	'C' and 'Java' Source Code Generator for Fitted Glm Objects
2018-03-09	IDetect	Isolate-Detect Methodology for Multiple Change-Point Detection
2018-03-09	joineRmeta	Joint Modelling for Meta-Analytic (Multi-Study) Data
2018-03-09	micompr	Multivariate Independent Comparison of Observations
2018-03-09	PP3	Three-Dimensional Exploratory Projection Pursuit
2018-03-09	wgeesel	Weighted Generalized Estimating Equations and Model Selection
2018-03-08	mgsub	Safe, Multiple, Simultaneous String Substitution
2018-03-08	PartCensReg	Estimation and Diagnostics for Partially Linear Censored Regression Models Based on Heavy-Tailed Distributions
2018-03-08	treatSens	Sensitivity Analysis for Causal Inference
2018-03-08	xoi	Tools for Analyzing Crossover Interference
2018-03-08	xpose4	Tools for Nonlinear Mixed-Effect Model Building and Diagnostics
2018-03-07	anomalyDetection	Implementation of Augmented Network Log Anomaly Detection Procedures
2018-03-07	bife	Binary Choice Models with Fixed Effects
2018-03-07	gender	Predict Gender from Names Using Historical Data
2018-03-07	LSRS	Land Surface Remote Sensing
2018-03-07	mvmeta	Multivariate and Univariate Meta-Analysis and Meta-Regression
2018-03-07	ppcSpatial	Spatial Analysis of Pakistan Population Census
2018-03-07	rodeo	A Code Generator for ODE-Based Models
2018-03-07	SCRT	Single-Case Randomization Tests
2018-03-06	ACMEeqtl	Estimation of Interpretable eQTL Effect Sizes Using a Log of Linear Model
2018-03-06	ahp	Analytic Hierarchy Process
2018-03-06	edfReader	Reading EDF(+) and BDF(+) Files
2018-03-06	HIMA	High-Dimensional Mediation Analysis
2018-03-06	ILS	Interlaboratory Study
2018-03-06	KraljicMatrix	A Quantified Implementation of the Kraljic Matrix
2018-03-06	nls.multstart	Robust Non-Linear Regression using AIC Scores
2018-03-06	NMF	Algorithms and Framework for Nonnegative Matrix Factorization (NMF)
2018-03-06	origami	Generalized Framework for Cross-Validation
2018-03-06	outbreaker2	Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data
2018-03-06	partialAR	Partial Autoregression
2018-03-06	QuantNorm	Mitigating the Adverse Impact of Batch Effects in Sample Pattern Detection
2018-03-06	robets	Forecasting Time Series with Robust Exponential Smoothing
2018-03-06	slickR	Create Interactive Carousels with the JavaScript 'Slick' Library
2018-03-06	spatialEco	Spatial Analysis and Modelling Utilities
2018-03-06	timsac	Time Series Analysis and Control Package
2018-03-05	adfExplorer	Import from and Export to Amiga Disk Files
2018-03-05	caRamel	Automatic Calibration by Evolutionary Multi Objective Algorithm
2018-03-05	cdfquantreg	Quantile Regression for Random Variables on the Unit Interval
2018-03-05	DAP	Discriminant Analysis via Projections
2018-03-05	ecospace	Simulating Community Assembly and Ecological Diversification Using Ecospace Frameworks
2018-03-05	elections	USA Presidential Elections Data
2018-03-05	forestr	Ecosystem and Canopy Structural Complexity Metrics from LiDAR
2018-03-05	funrar	Functional Rarity Indices Computation
2018-03-05	gepaf	Google Encoded Polyline Algorithm Format
2018-03-05	matrixTests	Fast Statistical Hypothesis Tests on Rows and Columns of Matrices
2018-03-05	miceExt	Extension Package to 'mice'
2018-03-05	NormExpression	Normalize Gene Expression Data using Evaluated Methods
2018-03-05	pbm	Protein Binding Models
2018-03-05	qdapDictionaries	Dictionaries and Word Lists for the 'qdap' Package
2018-03-05	rentrez	'Entrez' in R
2018-03-05	rgr	Applied Geochemistry EDA
2018-03-05	soundecology	Soundscape Ecology
2018-03-05	tidyimpute	Imputation the Tidyverse Way
2018-03-05	vowels	Vowel Manipulation, Normalization, and Plotting
2018-03-03	adeba	Adaptive Density Estimation by Bayesian Averaging
2018-03-03	bartMachineJARs	bartMachine JARs
2018-03-03	coxphf	Cox Regression with Firth's Penalized Likelihood
2018-03-03	enc	Portable Tools for 'UTF-8' Character Data
2018-03-03	hansard	Provides Easy Downloading Capabilities for the UK Parliament API
2018-03-03	highfrequency	Tools for Highfrequency Data Analysis
2018-03-03	ICS	Tools for Exploring Multivariate Data via ICS/ICA
2018-03-03	MendelianRandomization	Mendelian Randomization Package
2018-03-03	MNM	Multivariate Nonparametric Methods. An Approach Based on Spatial Signs and Ranks
2018-03-03	pocrm	Dose Finding in Drug Combination Phase I Trials Using PO-CRM
2018-03-03	pwr	Basic Functions for Power Analysis
2018-03-03	RcmdrPlugin.aRnova	R Commander Plug-in for Repeated-Measures ANOVA
2018-03-03	shiftR	Fast Enrichment Analysis via Circular Permutations
2018-03-03	tmcn	A Text Mining Toolkit for Chinese
2018-03-02	acs	Download, Manipulate, and Present American Community Survey and Decennial Data from the US Census
2018-03-02	comato	Analysis of Concept Maps and Concept Landscapes
2018-03-02	fuzzyjoin	Join Tables Together on Inexact Matching
2018-03-02	JADE	Blind Source Separation Methods Based on Joint Diagonalization and Some BSS Performance Criteria
2018-03-02	LDRTools	Tools for Linear Dimension Reduction
2018-03-02	OpenML	Open Machine Learning and Open Data Platform
2018-03-02	PerformanceAnalytics	Econometric Tools for Performance and Risk Analysis
2018-03-02	rbiouml	Interact with BioUML Server
2018-03-02	rpostgisLT	Managing Animal Movement Data with 'PostGIS' and R
2018-03-02	seewave	Sound Analysis and Synthesis
2018-03-02	wmwpow	Power Calculations for Two-Sample Wilcoxon-Mann-Whitney Test
2018-03-01	ashr	Methods for Adaptive Shrinkage, using Empirical Bayes
2018-03-01	binneR	Spectral Processing for High Resolution Flow Infusion Mass Spectrometry
2018-03-01	DiagrammeR	Graph/Network Visualization
2018-03-01	DoE.MIParray	Creation of Arrays by Mixed Integer Programming
2018-03-01	fauxpas	HTTP Error Helpers
2018-03-01	formula.tools	Programmatic Utilities for Manipulating Formulas, Expressions, Calls, Assignments and Other R Objects
2018-03-01	FusionLearn	Fusion Learning
2018-03-01	gWidgetsRGtk2	Toolkit Implementation of gWidgets for RGtk2
2018-03-01	ipwErrorY	Inverse Probability Weighting Estimation of Average Treatment Effect with Outcome Misclassification
2018-03-01	linearQ	Linear Algorithm for Simulating Quantiles in Multiscale Change-Point Segmentation Problem
2018-03-01	SCperf	Functions for Planning and Managing Inventories in a Supply Chain
2018-03-01	tensorBSS	Blind Source Separation Methods for Tensor-Valued Observations
2018-03-01	TrafficBDE	Traffic Status Prediction in Urban Places using Neural Network Models
2018-03-01	TTAinterfaceTrendAnalysis	Temporal Trend Analysis Graphical Interface
2018-02-28	GetITRData	Reading Financial Reports from Bovespa's ITR System
2018-02-28	ldhmm	Hidden Markov Model for Financial Time-Series Based on Lambda Distribution
2018-02-28	rmcorr	Repeated Measures Correlation
2018-02-28	ropenaq	Accesses Air Quality Data from the Open Data Platform OpenAQ
2018-02-28	SpatEntropy	Spatial Entropy Measures
2018-02-27	bpnreg	Bayesian Projected Normal Regression Models for Circular Data
2018-02-27	depend.truncation	Statistical Methods for the Analysis of Dependently Truncated Data
2018-02-27	filematrix	File-Backed Matrix Class with Convenient Read and Write Access
2018-02-27	gdtools	Utilities for Graphical Rendering
2018-02-27	icRSF	A Modified Random Survival Forest Algorithm
2018-02-27	idmTPreg	Regression Model for Progressive Illness Death Data
2018-02-27	kdensity	Kernel Density Estimation with Parametric Starts and Asymmetric Kernels
2018-02-27	photobiologySun	Data for Sunlight Spectra
2018-02-27	projector	Project Dense Vectors Representation of Texts on a 2D Plan
2018-02-27	truncnorm	Truncated Normal Distribution
2018-02-27	worldmet	Import Surface Meteorological Data from NOAA Integrated Surface Database (ISD)
2018-02-27	Zelig	Everyone's Statistical Software
2018-02-27	zenplots	Zigzag Expanded Navigation Plots
2018-02-26	Ac3net	Inferring Directional Conservative Causal Core Gene Networks
2018-02-26	carSurv	Correlation-Adjusted Regression Survival (CARS) Scores
2018-02-26	dclone	Data Cloning and MCMC Tools for Maximum Likelihood Methods
2018-02-26	DirectEffects	Estimating Controlled Direct Effects for Explaining Causal Findings
2018-02-26	fuzzywuzzyR	Fuzzy String Matching
2018-02-26	KGode	Kernel Based Gradient Matching for Parameter Inference in Ordinary Differential Equations
2018-02-26	mctest	Multicollinearity Diagnostic Measures
2018-02-26	mmcm	Modified Maximum Contrast Method
2018-02-26	onlineVAR	Online Fitting of Time-Adaptive Lasso Vector Auto Regression
2018-02-26	particles	A Graph Based Particle Simulator Based on D3-Force
2018-02-26	ph2bayes	Bayesian Single-Arm Phase II Designs
2018-02-26	photobiologyLamps	Spectral Irradiance Data for Lamps
2018-02-26	photobiologySensors	Spectral Response Data for Light Sensors
2018-02-26	PK	Basic Non-Compartmental Pharmacokinetics
2018-02-26	rospca	Robust Sparse PCA using the ROSPCA Algorithm
2018-02-26	SASxport	Read and Write 'SAS' 'XPORT' Files
2018-02-26	SVMMaj	Implementation of the SVM-Maj Algorithm
2018-02-26	TSVC	Tree-Structured Modelling of Varying Coefficients
2018-02-26	visreg	Visualization of Regression Models
2018-02-25	EDMeasure	Energy-Based Dependence Measures
2018-02-25	fdapace	Functional Data Analysis and Empirical Dynamics
2018-02-25	nzpullover	Driving Offences in New Zealand Between 2009 and 2016
2018-02-25	Rcssplot	Styling of Graphics using Cascading Style Sheets
2018-02-25	rpgm	Fast Simulation of Normal/Exponential Random Variables and Stochastic Differential Equations / Poisson Processes
2018-02-25	stoRy	Functions for the Analysis of Star Trek Thematic Data
2018-02-25	tidypredict	Run Predictions Inside the Database
2018-02-24	coloc	Colocalisation Tests of Two Genetic Traits
2018-02-23	assertr	Assertive Programming for R Analysis Pipelines
2018-02-23	bea.R	Bureau of Economic Analysis API
2018-02-23	clespr	Composite Likelihood Estimation for Spatial Data
2018-02-23	CPBayes	Bayesian Meta Analysis for Studying Cross-Phenotype Genetic Associations
2018-02-23	dynamo	Fit a Stochastic Dynamical Array Model to Array Data
2018-02-23	intamapInteractive	Interactive Add-on Functionality for 'intamap'
2018-02-23	multfisher	Optimal Exact Tests for Multiple Binary Endpoints
2018-02-23	neat	Efficient Network Enrichment Analysis Test
2018-02-23	PropCIs	Various Confidence Interval Methods for Proportions
2018-02-23	rpart	Recursive Partitioning and Regression Trees
2018-02-23	segclust2d	Bivariate Segmentation/Clustering Methods and Tools
2018-02-23	tkRplotR	Display Resizable Plots
2018-02-22	BEACH	Biometric Exploratory Analysis Creation House
2018-02-22	braQCA	Bootstrapped Robustness Assessment for Qualitative Comparative Analysis
2018-02-22	colmozzie	Dengue Cases and Climate Variables in Colombo Sri Lanka
2018-02-22	DGM	Dynamic Graphical Models
2018-02-22	gcerisk	Generalized Competing Event Model
2018-02-22	glmm	Generalized Linear Mixed Models via Monte Carlo Likelihood Approximation
2018-02-22	irtreliability	Item Response Theory Reliability
2018-02-22	lassopv	Nonparametric P-Value Estimation for Predictors in Lasso
2018-02-22	mev	Multivariate Extreme Value Distributions
2018-02-22	msgpack	A Compact, High Speed Data Format
2018-02-22	profvis	Interactive Visualizations for Profiling R Code
2018-02-22	RCRnorm	An Integrated Regression Model for Normalizing 'NanoString nCounter' Data
2018-02-22	stdReg	Regression Standardization
2018-02-22	suncalc	Compute Sun Position, Sunlight Phases, Moon Position and Lunar Phase
2018-02-22	VTrack	A Collection of Tools for the Analysis of Remote Acoustic Telemetry Data
2018-02-22	wbsts	Multiple Change-Point Detection for Nonstationary Time Series
2018-02-21	BIOMASS	Estimating Aboveground Biomass and Its Uncertainty in Tropical Forests
2018-02-21	chunkR	Read Tables in Chunks
2018-02-21	FlexGAM	Generalized Additive Models with Flexible Response Functions
2018-02-21	ivprobit	Instrumental Variables Probit Model
2018-02-21	matrixsampling	Simulations of Matrix Variate Distributions
2018-02-21	oasis	Multiple Sclerosis Lesion Segmentation using Magnetic Resonance Imaging (MRI)
2018-02-21	phyloTop	Calculating Topological Properties of Phylogenies
2018-02-21	RcmdrPlugin.KMggplot2	R Commander Plug-in for Data Visualization with 'ggplot2'
2018-02-21	rfUtilities	Random Forests Model Selection and Performance Evaluation
2018-02-21	rroad	Road Condition Analysis
2018-02-21	sdm	Species Distribution Modelling
2018-02-21	timeDate	Rmetrics - Chronological and Calendar Objects
2018-02-21	VeryLargeIntegers	Store and Operate with Arbitrarily Large Integers
2018-02-21	word.alignment	Computing Word Alignment Using IBM Model 1 (and Symmetrization) for a Given Parallel Corpus and Its Evaluation
2018-02-20	CircMLE	Maximum Likelihood Analysis of Circular Data
2018-02-20	gvcR	Genotypic Variance Components
2018-02-20	idx2r	Convert Files to and from IDX Format to Vectors, Matrices and Arrays
2018-02-20	InterVA4	Replicate and Analyse 'InterVA4'
2018-02-20	knitrProgressBar	Provides Progress Bars in 'knitr'
2018-02-20	LLM	Logit Leaf Model Classifier for Binary Classification
2018-02-20	measuRing	Detection and Control of Tree-Ring Widths on Scanned Image Sections
2018-02-20	meetupapi	Access 'Meetup' API
2018-02-20	mlxR	Simulation of Longitudinal Data
2018-02-20	naivereg	Nonparametric Additive Instrumental Variable Estimator: A Group Shrinkage Estimation Perspective
2018-02-20	reinsureR	Reinsurance Treaties Application
2018-02-20	sNPLS	NPLS Regression with L1 Penalization
2018-02-20	SpatPCA	Regularized Principal Component Analysis for Spatial Data
2018-02-19	archdata	Example Datasets from Archaeological Research
2018-02-19	bmrm	Bundle Methods for Regularized Risk Minimization Package
2018-02-19	colorhcplot	Colorful Hierarchical Clustering Dendrograms
2018-02-19	confSAM	Estimates and Bounds for the False Discovery Proportion, by Permutation
2018-02-19	fmriqa	Functional MRI Quality Assurance Routines
2018-02-19	forcats	Tools for Working with Categorical Variables (Factors)
2018-02-19	GpGp	Fast Gaussian Process Computation Using Vecchia's Approximation
2018-02-19	IROmiss	Imputation Regularized Optimization Algorithm
2018-02-19	qtl	Tools for Analyzing QTL Experiments
2018-02-19	riskyr	Rendering Risk Literacy more Transparent
2018-02-18	biosignalEMG	Tools for Electromyogram Signals (EMG) Analysis
2018-02-18	codingMatrices	Alternative Factor Coding Matrices for Linear Model Formulae
2018-02-18	ECOSolveR	Embedded Conic Solver in R
2018-02-18	githubinstall	A Helpful Way to Install R Packages Hosted on GitHub
2018-02-18	imbalance	Preprocessing Algorithms for Imbalanced Datasets
2018-02-18	kamila	Methods for Clustering Mixed-Type Data
2018-02-18	likelihoodAsy	Functions for Likelihood Asymptotics
2018-02-18	PottsUtils	Utility Functions of the Potts Models
2018-02-18	pryr	Tools for Computing on the Language
2018-02-18	ratios	Calculating Ratios Between Two Data Sets and Correction for Adhering Particles on Plants
2018-02-18	RcppNumerical	'Rcpp' Integration for Numerical Computing Libraries
2018-02-17	Compind	Composite Indicators Functions
2018-02-16	adklakedata	Adirondack Long-Term Lake Data
2018-02-16	cnmlcd	Maximum Likelihood Estimation of a Log-Concave Density Function
2018-02-16	getopt	C-Like 'getopt' Behavior
2018-02-16	ggmuller	Create Muller Plots of Evolutionary Dynamics
2018-02-16	googleAnalyticsR	Google Analytics API into R
2018-02-16	miscF	Miscellaneous Functions
2018-02-16	MST	Multivariate Survival Trees
2018-02-16	PakPC2017	Pakistan Population Census 2017
2018-02-16	recurse	Computes Revisitation Metrics for Trajectory Data
2018-02-16	spider	Species Identity and Evolution in R
2018-02-15	BioCircos	Interactive Circular Visualization of Genomic Data using 'htmlwidgets' and 'BioCircos.js'
2018-02-15	Brundle	Normalisation Tools for Inter-Condition Variability of ChIP-Seq Data
2018-02-15	clust.bin.pair	Statistical Methods for Analyzing Clustered Matched Pair Data
2018-02-15	micropan	Microbial Pan-Genome Analysis
2018-02-15	nscancor	Non-Negative and Sparse CCA
2018-02-15	phangorn	Phylogenetic Reconstruction and Analysis
2018-02-15	ratesci	Confidence Intervals for Comparisons of Binomial or Poisson Rates
2018-02-15	rmetasim	An Individual-Based Population Genetic Simulation Environment
2018-02-15	sparsesvd	Sparse Truncated Singular Value Decomposition (from 'SVDLIBC')
2018-02-15	teigen	Model-Based Clustering and Classification with the Multivariate t Distribution
2018-02-15	vcrpart	Tree-Based Varying Coefficient Regression for Generalized Linear and Ordinal Mixed Models
2018-02-14	Chaos01	0-1 Test for Chaos
2018-02-14	CorrectedFDR	Correcting False Discovery Rates
2018-02-14	EMMIXcskew	Fitting Mixtures of CFUST Distributions
2018-02-14	fda.usc	Functional Data Analysis and Utilities for Statistical Computing
2018-02-14	FuzzyNumbers	Tools to Deal with Fuzzy Numbers
2018-02-14	IATscores	Implicit Association Test Scores Using Robust Statistics
2018-02-14	MDMR	Multivariate Distance Matrix Regression
2018-02-14	monitoR	Acoustic Template Detection in R
2018-02-14	mplot	Graphical Model Stability and Variable Selection Procedures
2018-02-14	neldermead	R Port of the 'Scilab' Neldermead Module
2018-02-14	permuco	Permutation Tests for Regression, (Repeated Measures) ANOVA/ANCOVA and Comparison of Signals
2018-02-14	PPtreeViz	Projection Pursuit Classification Tree Visualization
2018-02-14	randtoolbox	Toolbox for Pseudo and Quasi Random Number Generation and RNG Tests
2018-02-14	REBayes	Empirical Bayes Estimation and Inference
2018-02-14	spTest	Nonparametric Hypothesis Tests of Isotropy and Symmetry
2018-02-14	ssrm.logmer	Sample Size Determination for Longitudinal Designs with Binary Outcome
2018-02-14	stpp	Space-Time Point Pattern Simulation, Visualisation and Analysis
2018-02-14	TurtleGraphics	Turtle Graphics
2018-02-13	BH	Boost C++ Header Files
2018-02-13	clusteredinterference	Causal Effects from Observational Studies with Clustered Interference
2018-02-13	EMMIXskew	The EM Algorithm and Skew Mixture Distribution
2018-02-13	epinet	Epidemic/Network-Related Tools
2018-02-13	fishdata	A Small Collection of Fish Population Datasets
2018-02-13	heavy	Robust Estimation Using Heavy-Tailed Distributions
2018-02-13	inferr	Inferential Statistics
2018-02-13	librarysnapshot	Library Snapshot for Packages and Dependencies in Use by Current Session
2018-02-13	mixture	Finite Gaussian Mixture Models for Clustering and Classification
2018-02-13	mopa	Species Distribution MOdeling with Pseudo-Absences
2018-02-13	optimsimplex	R Port of the 'Scilab' Optimsimplex Module
2018-02-13	pdmod	Proximal/Distal Modeling Framework for Pavlovian Conditioning Phenomena
2018-02-13	Rilostat	ILO Open Data via Ilostat Bulk Download Facility or SDMX Web Service
2018-02-13	RmecabKo	An 'Rcpp' Interface for Eunjeon Project
2018-02-13	SIS	Sure Independence Screening
2018-02-13	TexExamRandomizer	Personalizes and Randomizes Exams Written in 'LaTeX'
2018-02-12	basicspace	Recovering a Basic Space from Issue Scales
2018-02-12	Cluster.OBeu	Cluster Analysis 'OpenBudgets'
2018-02-12	DynTxRegime	Methods for Estimating Optimal Dynamic Treatment Regimes
2018-02-12	gamm4.test	Comparing Nonlinear Curves and Surface Estimations by Semiparametric Methods
2018-02-12	gglorenz	Plotting Lorenz Curve with the Blessing of 'ggplot2'
2018-02-12	GUniFrac	Generalized UniFrac Distances
2018-02-12	inca	Integer Calibration
2018-02-12	Lavash	Lava Estimation for the Sum of Sparse and Dense Signals
2018-02-12	microseq	Basic Biological Sequence Handling
2018-02-12	npmlda	Nonparametric Models for Longitudinal Data
2018-02-12	Pomic	Pattern Oriented Modelling Information Criterion
2018-02-12	revdbayes	Ratio-of-Uniforms Sampling for Bayesian Extreme Value Analysis
2018-02-12	scoring	Proper Scoring Rules
2018-02-12	shinyalert	Easily Create Pretty Popup Messages (Modals) in 'Shiny'
2018-02-12	shinyKGode	An Interactive Application for ODE Parameter Inference Using Gradient Matching
2018-02-12	spMC	Continuous-Lag Spatial Markov Chains
2018-02-12	swCRTdesign	Stepped Wedge Cluster Randomized Trial (SW CRT) Design
2018-02-12	tatoo	Combine and Export Data Frames
2018-02-12	wnominate	Multidimensional Vote Scaling Software
2018-02-11	distrom	Distributed Multinomial Regression
2018-02-11	estimability	Tools for Assessing Estimability of Linear Predictions
2018-02-11	fivethirtyeight	Data and Code Behind the Stories and Interactives at 'FiveThirtyEight'
2018-02-11	HDoutliers	Leland Wilkinson's Algorithm for Detecting Multidimensional Outliers
2018-02-11	lakemorpho	Lake Morphometry Metrics
2018-02-11	MomTrunc	Moments of Folded and Doubly Truncated Multivariate Distributions
2018-02-11	MultiOrd	Generation of Multivariate Ordinal Variates
2018-02-11	OrdNor	Concurrent Generation of Ordinal and Normal Data with Given Correlation Matrix and Marginal Distributions
2018-02-11	pheno2geno	High-Throughput Generation of Genetic Markers and Maps from Molecular Phenotypes for Crosses Between Inbred Strains
2018-02-11	PoisNor	Simultaneous Generation of Multivariate Data with Poisson and Normal Marginals
2018-02-11	rorcid	Interface to the 'Orcid.org' 'API'
2018-02-11	rphast	Interface to 'PHAST' Software for Comparative Genomics
2018-02-11	snappier	Compress and Decompress 'Snappy' Encoded Data
2018-02-11	textir	Inverse Regression for Text Analysis
2018-02-10	BinNor	Simultaneous Generation of Multivariate Binary and Normal Variates
2018-02-10	dataonderivatives	Easily Source Publicly Available Data on Derivatives
2018-02-10	ensembleEN	Ensembling Regularized Linear Models
2018-02-10	rrecsys	Environment for Evaluating Recommender Systems
2018-02-10	support.BWS	Basic Functions for Supporting an Implementation of Best-Worst Scaling
2018-02-09	BSPADATA	Bayesian Proposal to Fit Spatial Econometric Models
2018-02-09	Dykstra	Quadratic Programming using Cyclic Projections
2018-02-09	facilitation	A C++ Framework for Plant-Plant Interaction IBMs
2018-02-09	likeLTD	Tools to Evaluate DNA Profile Evidence
2018-02-09	LSDinterface	Reading LSD Results (.res) Files
2018-02-09	NatureSounds	Animal Sounds for Bioacustic Analysis
2018-02-09	NCutYX	Clustering of Omics Data of Multiple Types with a Multilayer Network Representation
2018-02-09	npcopTest	Non Parametric Test for Detecting Changes in the Copula
2018-02-09	oxcAAR	Interface to 'OxCal' Radiocarbon Calibration
2018-02-09	sme	Smoothing-Splines Mixed-Effects Models
2018-02-09	vote	Election Vote Counting
2018-02-08	adepro	A 'shiny' Application for the (Audio-)Visualization of Adverse Event Profiles
2018-02-08	adnuts	No-U-Turn MCMC Sampling for 'ADMB' and 'TMB' Models
2018-02-08	BIGDAWG	Case-Control Analysis of Multi-Allelic Loci
2018-02-08	fdadensity	Functional Data Analysis for Density Functions by Transformation to a Hilbert Space
2018-02-08	geozoning	Zoning Methods for Spatial Data
2018-02-08	micromap	Linked Micromap Plots
2018-02-08	mvoutlier	Multivariate Outlier Detection Based on Robust Methods
2018-02-08	oc	Optimal Classification Roll Call Analysis Software
2018-02-08	OutliersO3	Draws Overview of Outliers (O3) Plots
2018-02-08	qcQpcr	Histone ChIP-Seq qPCR Analyzer
2018-02-08	rcartocolor	'CARTOColors' Palettes
2018-02-08	specklestar	Reduction of Speckle Data from BTA 6-m Telescope
2018-02-08	SWMPr	Retrieving, Organizing, and Analyzing Estuary Monitoring Data
2018-02-07	coefplot	Plots Coefficients from Fitted Models
2018-02-07	FADA	Variable Selection for Supervised Classification in High Dimension
2018-02-07	funbarRF	Fungal Species Identification using DNA Barcode with Random Forest
2018-02-07	glarma	Generalized Linear Autoregressive Moving Average Models
2018-02-07	glmtlp	Truncated Lasso Regularized Generalized Linear Models
2018-02-07	jmotif	Time Series Analysis Toolkit Based on Symbolic Aggregate Dicretization, i.e. SAX
2018-02-07	LowRankQP	Low Rank Quadratic Programming
2018-02-07	powerMediation	Power/Sample Size Calculation for Mediation Analysis
2018-02-07	powerSurvEpi	Power and Sample Size Calculation for Survival Analysis of Epidemiological Studies
2018-02-07	PTXQC	Quality Report Generation for MaxQuant Results
2018-02-07	rosqp	Quadratic Programming Solver using the 'OSQP' Library
2018-02-07	shape	Functions for Plotting Graphical Shapes, Colors
2018-02-07	swirlify	A Toolbox for Writing 'swirl' Courses
2018-02-07	valuer	Pricing of Variable Annuities
2018-02-07	WindCurves	Tool to Fit Wind Turbine Power Curves
2018-02-06	CLA	Critical Line Algorithm in Pure R
2018-02-06	climextRemes	Tools for Analyzing Climate Extremes
2018-02-06	DACF	Data Analysis with Ceiling and/or Floor Data
2018-02-06	detectRUNS	Detect Runs of Homozygosity and Runs of Heterozygosity in Diploid Genomes
2018-02-06	DWDLargeR	Fast Algorithms for Large Scale Generalized Distance Weighted Discrimination
2018-02-06	ecespa	Functions for Spatial Point Pattern Analysis
2018-02-06	googlePrintr	Connect to 'Google Cloud Print' API
2018-02-06	lira	LInear Regression in Astronomy
2018-02-06	valection	Sampler for Verification Studies
2018-02-05	cepreader	Read 'CEP' and Legacy 'CANOCO' Files
2018-02-05	dvmisc	Faster Computation of Common Statistics and Miscellaneous Functions
2018-02-05	entropart	Entropy Partitioning to Measure Diversity
2018-02-05	GetTDData	Get Data for Brazilian Bonds (Tesouro Direto)
2018-02-05	ggbuildr	Save Incremental Builds of Plots
2018-02-05	lmodel2	Model II Regression
2018-02-05	MBC	Multivariate Bias Correction of Climate Model Outputs
2018-02-05	migest	Methods for the Indirect Estimation of Bilateral Migration
2018-02-05	nord	Arctic Ice Studio's Nord and Group of Seven Inspired Colour Palettes
2018-02-05	population	Models for Simulating Populations
2018-02-05	quantoptr	Algorithms for Quantile- And Mean-Optimal Treatment Regimes
2018-02-05	RaPKod	Random Projection Kernel Outlier Detector
2018-02-05	seriation	Infrastructure for Ordering Objects Using Seriation
2018-02-05	SOMbrero	SOM Bound to Realize Euclidean and Relational Outputs
2018-02-05	survivalsvm	Survival Support Vector Analysis
2018-02-04	aVirtualTwins	Adaptation of Virtual Twins Method from Jared Foster
2018-02-04	eda4treeR	Experimental Design and Analysis for Tree Improvement
2018-02-04	funtimes	Functions for Time Series Analysis
2018-02-04	gk	g-and-k and g-and-h Distribution Functions
2018-02-04	mldr	Exploratory Data Analysis and Manipulation of Multi-Label Data Sets
2018-02-04	rmdshower	'R' 'Markdown' Format for 'shower' Presentations
2018-02-04	rugarch	Univariate GARCH Models
2018-02-03	fuzzyforest	Fuzzy Forests
2018-02-03	pcev	Principal Component of Explained Variance
2018-02-02	adegenet	Exploratory Analysis of Genetic and Genomic Data
2018-02-02	BNN	Bayesian Neural Network for High-Dimensional Nonlinear Variable Selection
2018-02-02	ICSOutlier	Outlier Detection Using Invariant Coordinate Selection
2018-02-02	miic	Learning Causal or Non-Causal Graphical Models Using Information Theory
2018-02-02	msm	Multi-State Markov and Hidden Markov Models in Continuous Time
2018-02-02	pinnacle.API	A Wrapper for the Pinnacle API
2018-02-02	pipeGS	Permutation p-Value Estimation for Gene Set Tests
2018-02-02	pmclust	Parallel Model-Based Clustering using Expectation-Gathering-Maximization Algorithm for Finite Mixture Gaussian Model
2018-02-02	SpaDES.addins	Development Tools for 'SpaDES' and 'SpaDES' Modules
2018-02-02	stapler	Simultaneous Truth and Performance Level Estimation
2018-02-02	wrswoR	Weighted Random Sampling without Replacement
2018-02-02	Zseq	Integer Sequence Generator
2018-02-01	ald	The Asymmetric Laplace Distribution
2018-02-01	awsMethods	Class and Methods Definitions for Packages 'aws', 'adimpro', 'fmri', 'dwi'
2018-02-01	BsMD	Bayes Screening and Model Discrimination
2018-02-01	cifti	Toolbox for Connectivity Informatics Technology Initiative ('CIFTI') Files
2018-02-01	d3heatmap	Interactive Heat Maps Using 'htmlwidgets' and 'D3.js'
2018-02-01	EMCluster	EM Algorithm for Model-Based Clustering of Finite Mixture Gaussian Distribution
2018-02-01	GGMselect	Gaussian Graphs Models Selection
2018-02-01	gifti	Reads in 'Neuroimaging' 'GIFTI' Files with Geometry Information
2018-02-01	lqr	Robust Linear Quantile Regression
2018-02-01	modmarg	Calculating Marginal Effects and Levels with Errors
2018-02-01	opticut	Likelihood Based Optimal Partitioning and Indicator Species Analysis
2018-02-01	RVowpalWabbit	R Interface to the Vowpal Wabbit
2018-02-01	topmodel	Implementation of the Hydrological Model TOPMODEL in R
2018-02-01	viridisLite	Default Color Maps from 'matplotlib' (Lite Version)
2018-01-31	denoiSeq	Differential Expression Analysis Using a Bottom-Up Model
2018-01-31	Massign	Simple Matrix Construction
2018-01-31	MixGHD	Model Based Clustering, Classification and Discriminant Analysis Using the Mixture of Generalized Hyperbolic Distributions
2018-01-31	mvnfast	Fast Multivariate Normal and Student's t Methods
2018-01-31	nlsr	Functions for Nonlinear Least Squares Solutions
2018-01-31	OOR	Optimistic Optimization in R
2018-01-31	RCrypto	'Httr' Implementation of the 'Coinmarketcap' API
2018-01-31	rPackedBar	Packed Bar Charts with 'plotly'
2018-01-31	RTriangle	Triangle - A 2D Quality Mesh Generator and Delaunay Triangulator
2018-01-31	SiMRiv	Simulating Multistate Movements in River/Heterogeneous Landscapes
2018-01-30	asciiruler	Render an ASCII Ruler
2018-01-30	BeSS	Best Subset Selection in Linear, Logistic and CoxPH Models
2018-01-30	errorist	Automatically Search Errors or Warnings
2018-01-30	gnorm	Generalized Normal/Exponential Power Distribution
2018-01-30	indelmiss	Insertion Deletion Analysis While Accounting for Possible Missing Data
2018-01-30	KRIG	Spatial Statistic with Kriging
2018-01-30	markophylo	Markov Chain Models for Phylogenetic Trees
2018-01-30	mr.raps	Two Sample Mendelian Randomization using Robust Adjusted Profile Score
2018-01-30	profmem	Simple Memory Profiling for R
2018-01-30	RBMRB	BMRB Data Access and Visualization
2018-01-30	relatable	Functions for Mapping Key-Value Pairs, Many-to-Many, One-to-Many, and Many-to-One Relations
2018-01-30	robustBLME	Robust Bayesian Linear Mixed-Effects Models using ABC
2018-01-30	rpivotTable	Build Powerful Pivot Tables and Dynamically Slice & Dice your Data
2018-01-30	rtfbs	Transcription Factor Binding Site Identification Tool
2018-01-30	scdensity	Shape-Constrained Kernel Density Estimation
2018-01-30	smotefamily	A Collection of Oversampling Techniques for Class Imbalance Problem Based on SMOTE
2018-01-30	spatstat.local	Extension to 'spatstat' for Local Composite Likelihood
2018-01-30	String2AdjMatrix	Creates an Adjacency Matrix from a List of Strings
2018-01-30	tibbletime	Time Aware Tibbles
2018-01-30	timereg	Flexible Regression Models for Survival Data
2018-01-29	atsd	Support Querying Axibase Time-Series Database
2018-01-29	bmotif	Counting Motifs in Bipartite Networks
2018-01-29	cherry	Multiple Testing Methods for Exploratory Research
2018-01-29	cometExactTest	Exact Test from the Combinations of Mutually Exclusive Alterations (CoMEt) Algorithm
2018-01-29	dalmatian	Automating the Fitting of Double Linear Mixed Models in 'JAGS'
2018-01-29	fields	Tools for Spatial Data
2018-01-29	hdrcde	Highest Density Regions and Conditional Density Estimation
2018-01-29	ludic	Linkage Using Diagnosis Codes
2018-01-29	networkR	Network Analysis and Visualization
2018-01-29	NIRStat	Novel Statistical Methods for Studying Near-Infrared Spectroscopy (NIRS) Time Series Data
2018-01-29	phylotate	Phylogenies with Annotations
2018-01-29	rubias	Bayesian Inference from the Conditional Genetic Stock Identification Model
2018-01-29	SSDM	Stacked Species Distribution Modelling
2018-01-29	subselect	Selecting Variable Subsets
2018-01-29	timetools	Seasonal/Sequential (Instants/Durations, Even or not) Time Series
2018-01-29	tRophicPosition	Bayesian Trophic Position Calculation with Stable Isotopes
2018-01-29	waver	Calculate Fetch and Wave Energy
2018-01-28	adehabitatLT	Analysis of Animal Movements
2018-01-28	bcrm	Bayesian Continual Reassessment Method for Phase I Dose-Escalation Trials
2018-01-28	clustRcompaR	Easy Interface for Clustering a Set of Documents and Exploring Group- Based Patterns
2018-01-28	glmpath	L1 Regularization Path for Generalized Linear Models and Cox Proportional Hazards Model
2018-01-28	libsoc	Read, Create and Write 'PharmML' Standard Output (so) XML Files
2018-01-28	rrBLUP	Ridge Regression and Other Kernels for Genomic Selection
2018-01-28	stepPlr	L2 Penalized Logistic Regression with Stepwise Variable Selection
2018-01-28	stm	Estimation of the Structural Topic Model
2018-01-28	zeallot	Multiple, Unpacking, and Destructuring Assignment
2018-01-27	ANOVAreplication	Test ANOVA Replications by Means of the Prior Predictive p-Value
2018-01-27	bigtcr	Nonparametric Analysis of Bivariate Gap Time with Competing Risks
2018-01-26	aidar	Tools for Reading AIDA Files
2018-01-26	bcrypt	'Blowfish' Password Hashing Algorithm
2018-01-26	gutenbergr	Download and Process Public Domain Works from Project Gutenberg
2018-01-26	hypergea	Hypergeometric Tests
2018-01-26	ic.infer	Inequality Constrained Inference in Linear Normal Situations
2018-01-26	IndexNumR	Index Number Calculation
2018-01-26	jmuOutlier	Permutation Tests for Nonparametric Statistics
2018-01-26	kokudosuuchi	R Interface to 'Kokudo Suuchi' API
2018-01-26	languagelayeR	Access the 'languagelayer' API
2018-01-26	LSD	Lots of Superior Depictions
2018-01-26	matchingR	Matching Algorithms in R and C++
2018-01-26	mogavs	Multiobjective Genetic Algorithm for Variable Selection in Regression
2018-01-26	popkin	Estimate Kinship and FST under Arbitrary Population Structure
2018-01-26	prrd	Parallel Runs of Reverse Depends
2018-01-26	R2DT	Translation of Base R-Like Functions for 'data.table' Objects
2018-01-26	ROI	R Optimization Infrastructure
2018-01-26	waterfalls	Create Waterfall Charts using 'ggplot2' Simply
2018-01-25	aggregation	p-Value Aggregation Methods
2018-01-25	aucm	AUC Maximization
2018-01-25	censusr	Collect Data from the Census API
2018-01-25	crimCV	Group-Based Modelling of Longitudinal Data
2018-01-25	DBItest	Testing 'DBI' Back Ends
2018-01-25	dendroextras	Extra Functions to Cut, Label and Colour Dendrogram Clusters
2018-01-25	diagis	Diagnostic Plot and Multivariate Summary Statistics of Weighted Samples from Importance Sampling
2018-01-25	ETLUtils	Utility Functions to Execute Standard Extract/Transform/Load Operations (using Package 'ff') on Large Data
2018-01-25	finch	Parse Darwin Core Files
2018-01-25	gradDescent	Gradient Descent for Regression Tasks
2018-01-25	heims	Decode and Validate HEIMS Data from Department of Education, Australia
2018-01-25	iotools	I/O Tools for Streaming
2018-01-25	lazyWeave	LaTeX Wrappers for R Users
2018-01-25	multiselect	Selecting Combinations of Predictors by Leveraging Multiple AUCs for an Ordered Multilevel Outcome
2018-01-24	datapasta	R Tools for Data Copy-Pasta
2018-01-24	devFunc	Clear and Condense Argument Check for User-Defined Functions
2018-01-24	geno2proteo	Finding the DNA and Protein Sequences of Any Genomic or Proteomic Loci
2018-01-24	highlightHTML	Highlight HTML Text and Tables
2018-01-24	letsR	Tools for Data Handling and Analysis in Macroecology
2018-01-24	MPR.genotyping	Maximum Parsimony of Recombination to Infer Parental Genotypes
2018-01-24	neverhpfilter	A Better Alternative to the Hodrick-Prescott Filter
2018-01-24	pgam	Poisson-Gamma Additive Models
2018-01-24	RcppGreedySetCover	Greedy Set Cover
2018-01-24	RInSp	R Individual Specialization (RInSp)
2018-01-24	santaR	Short Asynchronous Time-Series Analysis
2018-01-24	scanstatistics	Space-Time Anomaly Detection using Scan Statistics
2018-01-24	showimage	Show an Image on an 'R' Graphics Device
2018-01-24	strandCet	Estimation of Biological Parameters from Stranded Cetaceans
2018-01-24	TCIApathfinder	Client for the Cancer Imaging Archive REST API
2018-01-24	thief	Temporal Hierarchical Forecasting
2018-01-24	TSS.RESTREND	Time Series Segmentation of Residual Trends
2018-01-24	xml2	Parse XML
2018-01-23	BibPlots	Plot Functions for Use in Bibliometrics
2018-01-23	crch	Censored Regression with Conditional Heteroscedasticity
2018-01-23	hdm	High-Dimensional Metrics
2018-01-23	httk	High-Throughput Toxicokinetics
2018-01-23	MaxentVariableSelection	Selecting the Best Set of Relevant Environmental Variables along with the Optimal Regularization Multiplier for Maxent Niche Modeling
2018-01-23	MRS	Multi-Resolution Scanning for Cross-Sample Differences
2018-01-23	mtsdi	Multivariate Time Series Data Imputation
2018-01-23	RDocumentation	Integrate R with 'RDocumentation'
2018-01-23	Xplortext	Statistical Analysis of Textual Data
2018-01-23	zoon	Reproducible, Accessible & Shareable Species Distribution Modelling
2018-01-22	BANOVA	Hierarchical Bayesian ANOVA Models
2018-01-22	Bioi	Biological Image Analysis
2018-01-22	ECoL	Complexity Measures for Classification Problems
2018-01-22	enetLTS	Robust and Sparse Methods for High Dimensional Linear and Logistic Regression
2018-01-22	gLRTH	Genome-Wide Association and Linkage Analysis under Heterogeneity
2018-01-22	jcext	Extended Classification of Weather Types
2018-01-22	OmicsPLS	Perform Two-Way Orthogonal Partial Least Squares
2018-01-22	pals	Color Palettes, Colormaps, and Tools to Evaluate Them
2018-01-22	PAmeasures	Prediction and Accuracy Measures for Nonlinear Models and for Right-Censored Time-to-Event Data
2018-01-22	tibble	Simple Data Frames
2018-01-22	TimeSeries.OBeu	Time Series Analysis 'OpenBudgets'
2018-01-21	CreditRisk	Evaluation of Credit Risk with Structural and Reduced Form Models
2018-01-21	geophys	Geophysics, Continuum Mechanics, Gravity Modeling
2018-01-21	LinkageMapView	Plot Linkage Group Maps with Quantitative Trait Loci
2018-01-21	listenv	Environments Behaving (Almost) as Lists
2018-01-21	nofrills	Low-Cost Anonymous Functions
2018-01-21	Rblpapi	R Interface to 'Bloomberg'
2018-01-21	rMR	Importing Data from Loligo Systems Software, Calculating Metabolic Rates and Critical Tensions
2018-01-21	rSCA	An R Package for Stepwise Cluster Analysis
2018-01-21	tropAlgebra	Tropical Algebraic Functions
2018-01-20	dat	Tools for Data Manipulation
2018-01-20	equSA	Estimate Directed and Undirected Graphical Models and Construct Networks
2018-01-20	ewoc	Escalation with Overdose Control
2018-01-20	LoopAnalyst	A Collection of Tools to Conduct Levins' Loop Analysis
2018-01-20	RClickhouse	A 'DBI' Interface to the 'Yandex Clickhouse' Database Providing Basic 'dplyr' Support
2018-01-20	Rwave	Time-Frequency Analysis of 1-D Signals
2018-01-20	svgViewR	3D Animated Interactive Visualizations Using SVG
2018-01-19	abjutils	Useful Tools for Jurimetrical Analysis Used by the Brazilian Jurimetrics Association
2018-01-19	adabag	Applies Multiclass AdaBoost.M1, SAMME and Bagging
2018-01-19	crossword.r	Generating Crosswords from Word Lists
2018-01-19	descr	Descriptive Statistics
2018-01-19	dynatopmodel	Implementation of the Dynamic TOPMODEL Hydrological Model
2018-01-19	face	Fast Covariance Estimation for Sparse Functional Data
2018-01-19	glamlasso	Penalization in Large Scale Generalized Linear Array Models
2018-01-19	HDPenReg	High-Dimensional Penalized Regression
2018-01-19	lbreg	Log-Binomial Regression with Constrained Optimization
2018-01-19	LN0SCIs	Simultaneous CIs for Ratios of Means of Log-Normal Populations with Zeros
2018-01-19	longRPart2	Recursive Partitioning of Longitudinal Data
2018-01-19	mvabund	Statistical Methods for Analysing Multivariate Abundance Data
2018-01-19	pivotaltrackR	A Client for the 'Pivotal Tracker' API
2018-01-19	PSW	Propensity Score Weighting Methods for Dichotomous Treatments
2018-01-19	RNAseqNet	Log-Linear Poisson Graphical Model with Hot-Deck Multiple Imputation
2018-01-19	rosetteApi	'Rosette' API
2018-01-19	rrpack	Reduced-Rank Regression
2018-01-18	canprot	Chemical Composition of Differential Protein Expression
2018-01-18	cgdsr	R-Based API for Accessing the MSKCC Cancer Genomics Data Server (CGDS)
2018-01-18	dtree	Decision Trees
2018-01-18	ensembleBMA	Probabilistic Forecasting using Ensembles and Bayesian Model Averaging
2018-01-18	GEOmap	Topographic and Geologic Mapping
2018-01-18	gkmSVM	Gapped-Kmer Support Vector Machine
2018-01-18	homologene	Quick Access to Homology Information
2018-01-18	PEIP	Geophysical Inverse Theory and Optimization
2018-01-18	Renvlp	Computing Envelope Estimators
2018-01-18	RFOC	Graphics for Spherical Distributions and Earthquake Focal Mechanisms
2018-01-18	RPMG	Graphical User Interface (GUI) for Interactive R Analysis Sessions
2018-01-18	RTOMO	Visualization for Seismic Tomography
2018-01-18	SDT	Self-Determination Theory Measures
2018-01-18	SMMA	Soft Maximin Estimation for Large Scale Array-Tensor Models
2018-01-18	TukeyRegion	Tukey Region and Median
2018-01-18	vecsets	Like base::sets Tools But Keeps Duplicate Elements
2018-01-18	zoeppritz	Seismic Reflection and Scattering Coefficients
2018-01-17	bbw	Blocked Weighted Bootstrap
2018-01-17	conting	Bayesian Analysis of Contingency Tables
2018-01-17	GenSA	Generalized Simulated Annealing
2018-01-17	markmyassignment	Automatic Marking of R Assignments
2018-01-17	mau	Decision Models with Multi Attribute Utility Theory
2018-01-16	bnpsd	Simulate Genotypes from the BN-PSD Admixture Model
2018-01-16	dawai	Discriminant Analysis with Additional Information
2018-01-16	KernelKnn	Kernel k Nearest Neighbors
2018-01-16	LPM	Linear Parametric Models Applied to Hydrological Series
2018-01-16	mazeinda	Monotonic Association on Zero-Inflated Data
2018-01-16	natural	Estimating the Error Variance in a High-Dimensional Linear Model
2018-01-16	opencage	Interface to the OpenCage API
2018-01-16	optimus	Model Based Diagnostics for Multivariate Cluster Analysis
2018-01-16	palmtree	Partially Additive (Generalized) Linear Model Trees
2018-01-16	prettydoc	Creating Pretty Documents from R Markdown
2018-01-16	randomLCA	Random Effects Latent Class Analysis
2018-01-16	ROI.plugin.lpsolve	'lp_solve' Plugin for the 'R' Optimization Infrastructure
2018-01-16	showtext	Using Fonts More Easily in R Graphs
2018-01-16	splashr	Tools to Work with the 'Splash' 'JavaScript' Rendering and Scraping Service
2018-01-16	toolmaRk	Tests for Same-Source of Toolmarks
2018-01-15	easySdcTable	Easy Interface to the Statistical Disclosure Control Package 'sdcTable'
2018-01-15	FREGAT	Family REGional Association Tests
2018-01-15	GoogleKnowledgeGraphR	Retrieve Information from 'Google Knowledge Graph' API
2018-01-15	hexbin	Hexagonal Binning Routines
2018-01-15	io	A Unified Framework for Input-Output Operations in R
2018-01-15	miniCRAN	Create a Mini Version of CRAN Containing Only Selected Packages
2018-01-15	photobiologyFilters	Spectral Transmittance Data for Filters
2018-01-15	r6extended	Extension for 'R6' Base Class
2018-01-15	RPPanalyzer	Reads, Annotates, and Normalizes Reverse Phase Protein Array Data
2018-01-14	adaptMCMC	Implementation of a Generic Adaptive Monte Carlo Markov Chain Sampler
2018-01-14	COMBAT	A Combined Association Test for Genes using Summary Statistics
2018-01-14	cordillera	Calculation of the OPTICS Cordillera
2018-01-14	Fragman	Fragment Analysis in R
2018-01-14	pcaPP	Robust PCA by Projection Pursuit
2018-01-14	photobiologyLEDs	Spectral Data for Light-Emitting-Diodes
2018-01-13	Emcdf	Computation and Visualization of Empirical Joint Distribution (Empirical Joint CDF)
2018-01-13	hkclustering	Ensemble Clustering using K Means and Hierarchical Clustering
2018-01-13	MatrixEQTL	Matrix eQTL: Ultra Fast eQTL Analysis via Large Matrix Operations
2018-01-13	PGRdup	Discover Probable Duplicates in Plant Genetic Resources Collections
2018-01-13	stubthat	Stubbing Framework for R
2018-01-13	TukeyC	Conventional Tukey Test
2018-01-13	wunderscraper	Scrape the 'Wunderground' API
2018-01-12	moult	Models for Analysing Moult in Birds
2018-01-12	ngspatial	Fitting the Centered Autologistic and Sparse Spatial Generalized Linear Mixed Models for Areal Data
2018-01-12	preText	Diagnostics to Assess the Effects of Text Preprocessing Decisions
2018-01-12	PRIMME	Eigenvalues and Singular Values and Vectors from Large Matrices
2018-01-12	qCBA	Quantitative Classification by Association Rules
2018-01-12	rSQM	Statistical Downscaling Toolkit for Climate Change Scenario using Non Parametric Quantile Mapping
2018-01-11	AlleleRetain	Allele Retention, Inbreeding, and Demography
2018-01-11	bayesSurv	Bayesian Survival Regression with Flexible Error and Random Effects Distributions
2018-01-11	bigmemory	Manage Massive Matrices with Shared Memory and Memory-Mapped Files
2018-01-11	DiceView	Plot Methods for Computer Experiments Design and Surrogate
2018-01-11	DirectedClustering	Directed Weighted Clustering Coefficient
2018-01-11	irlba	Fast Truncated Singular Value Decomposition and Principal Components Analysis for Large Dense and Sparse Matrices
2018-01-11	kexpmv	Matrix Exponential using Krylov Subspace Routines
2018-01-11	QCApro	Advanced Functionality for Performing and Evaluating Qualitative Comparative Analysis
2018-01-11	text2vec	Modern Text Mining Framework for R
2018-01-11	tsdf	Two-/Three-Stage Designs for Phase 1&2 Clinical Trials
2018-01-10	BinOrdNonNor	Concurrent Generation of Binary, Ordinal and Continuous Data
2018-01-10	BivUnifBin	Generation of Bivariate Uniform Data and Its Relation to Bivariate Binary Data
2018-01-10	brant	Test for Parallel Regression Assumption
2018-01-10	changepointsVar	Change-Points Detections for Changes in Variance
2018-01-10	CorrToolBox	Modeling Correlational Magnitude Transformations in Discretization Contexts
2018-01-10	ExpDE	Modular Differential Evolution for Experimenting with Operators
2018-01-10	FinancialInstrument	Financial Instrument Model Infrastructure and Meta-Data
2018-01-10	IATScore	Scoring Algorithm for the Implicit Association Test (IAT)
2018-01-10	influxdbr	R Interface to InfluxDB
2018-01-10	lba	Latent Budget Analysis for Compositional Data
2018-01-10	MBESS	The MBESS R Package
2018-01-10	motmot.2.0	Models of Trait Macroevolution on Trees
2018-01-10	MultiRNG	Multivariate Pseudo-Random Number Generation
2018-01-10	pbapply	Adding Progress Bar to '*apply' Functions
2018-01-10	phylosignal	Exploring the Phylogenetic Signal in Continuous Traits
2018-01-10	PoisBinOrdNonNor	Generation of Up to Four Different Types of Variables
2018-01-10	PoisBinOrdNor	Data Generation with Poisson, Binary, Ordinal and Normal Components
2018-01-10	QTLRel	Tools for Mapping of Quantitative Traits of Genetically Related Individuals and Calculating Identity Coefficients from Pedigrees
2018-01-10	RandPro	Random Projection with Classification
2018-01-10	rFSA	Feasible Solution Algorithm for Finding Best Subsets and Interactions
2018-01-10	strider	Strided Iterator and Range
2018-01-10	tdr	Target Diagram
2018-01-10	UnivRNG	Univariate Pseudo-Random Number Generation
2018-01-09	ATR	Alternative Tree Representation
2018-01-09	bullwhipgame	Bullwhip Effect Demo in Shiny
2018-01-09	easySVG	An Easy SVG Basic Elements Generator
2018-01-09	formulize	Add Formula Interfaces to Modelling Functions
2018-01-09	MatchIt	Nonparametric Preprocessing for Parametric Causal Inference
2018-01-09	osmose	Object Oriented Simulator of Marine Ecosystems
2018-01-09	Rbgs	Reading and Background Subtraction in Videos
2018-01-09	RGBM	LS-TreeBoost and LAD-TreeBoost for Gene Regulatory Network Reconstruction
2018-01-09	rlme	Rank-Based Estimation and Prediction in Random Effects Nested Models
2018-01-09	univOutl	Detection of Univariate Outliers
2018-01-08	clam	Classical Age-Depth Modelling of Cores from Deposits
2018-01-08	comparer	Compare Output and Run Time
2018-01-08	constants	Reference on Constants, Units and Uncertainty
2018-01-08	csv	Read and Write CSV Files with Selected Conventions
2018-01-08	dprint	Print Tabular Data to Graphics Device
2018-01-08	dynsbm	Dynamic Stochastic Block Models
2018-01-08	factoptd	Factorial Optimal Designs for Two-Colour cDNA Microarray Experiments
2018-01-08	gtWAS	Genome and Transcriptome Wide Association Study
2018-01-08	mistat	Data Sets, Functions and Examples from the Book: "Modern Industrial Statistics" by Kenett, Zacks and Amberti
2018-01-08	sgee	Stagewise Generalized Estimating Equations
2018-01-08	shinyjs	Easily Improve the User Experience of Your Shiny Apps in Seconds
2018-01-08	spanish	Translate Quantities from Strings Spelled in Spanish to Integer
2018-01-08	xptr	Manipulating External Pointer
2018-01-07	ExplainPrediction	Explanation of Predictions for Classification and Regression Models
2018-01-07	fingerprint	Functions to Operate on Binary Fingerprint Data
2018-01-07	grove	Wavelet Functional ANOVA Through Markov Groves
2018-01-07	rms	Regression Modeling Strategies
2018-01-06	date	Functions for Handling Dates
2018-01-06	DPpackage	Bayesian Nonparametric Modeling in R
2018-01-06	DRR	Dimensionality Reduction via Regression
2018-01-06	fmbasics	Financial Market Building Blocks
2018-01-06	qlcData	Processing Data for Quantitative Language Comparison (QLC)
2018-01-06	SciViews	SciViews - Main package
2018-01-05	APPEstimation	Adjusted Prediction Model Performance Estimation
2018-01-05	bda	Density Estimation for Grouped Data
2018-01-05	binst	Data Preprocessing, Binning for Classification and Regression
2018-01-05	coindeskr	Access 'CoinDesk' Bitcoin Price Index API
2018-01-05	diffusion	Forecast the Diffusion of New Products
2018-01-05	DNetFinder	Estimating Differential Networks under Semiparametric Gaussian Graphical Models
2018-01-05	ellipse	Functions for Drawing Ellipses and Ellipse-Like Confidence Regions
2018-01-05	fdrDiscreteNull	False Discovery Rate Procedures Under Discrete and Heterogeneous Null Distributions
2018-01-05	MAPA	Multiple Aggregation Prediction Algorithm
2018-01-05	MatManlyMix	Matrix Clustering with Gaussian and Manly Mixture Models
2018-01-05	mra	Mark-Recapture Analysis
2018-01-05	paramlink	Parametric Linkage and Other Pedigree Analysis in R
2018-01-05	probout	Unsupervised Multivariate Outlier Probabilities for Large Datasets
2018-01-05	profile	Read, Manipulate, and Write Profiler Data
2018-01-05	ramchoice	Estimation and Inference in Random Attention Models
2018-01-05	rapidraker	Rapid Automatic Keyword Extraction (RAKE) Algorithm
2018-01-05	relSim	Relative Simulator
2018-01-05	remoter	Remote R: Control a Remote R Session from a Local One
2018-01-05	rmumps	Wrapper for MUMPS Library
2018-01-05	unitedR	Assessment and Evaluation of Formations in United
2018-01-05	walmartAPI	Walmart Open API Wrapper
2018-01-05	washdata	Urban Water and Sanitation Survey Dataset
2018-01-05	wavefunction	Wave Function Representation of Real Distributions
2018-01-04	afCEC	Active Function Cross-Entropy Clustering
2018-01-04	analogsea	Interface to 'Digital Ocean'
2018-01-04	DoseFinding	Planning and Analyzing Dose Finding Experiments
2018-01-04	fastrtext	'fastText' Wrapper for Text Classification and Word Representation
2018-01-04	fmdates	Financial Market Date Calculations
2018-01-04	gWidgets2RGtk2	Implementation of gWidgets2 for the RGtk2 Package
2018-01-04	ipft	Indoor Positioning Fingerprinting Toolset
2018-01-04	LCAvarsel	Variable Selection for Latent Class Analysis
2018-01-04	lhs	Latin Hypercube Samples
2018-01-04	memo	In-Memory Caching for Repeated Computations
2018-01-04	PCMRS	Model Response Styles in Partial Credit Models
2018-01-04	ppclust	Probabilistic and Possibilistic Cluster Analysis
2018-01-04	R.cache	Fast and Light-Weight Caching (Memoization) of Objects and Results to Speed Up Computations
2018-01-04	rioja	Analysis of Quaternary Science Data
2018-01-04	rptR	Repeatability Estimation for Gaussian and Non-Gaussian Data
2018-01-04	SparseDC	Implementation of SparseDC Algorithm
2018-01-03	BinNonNor	Data Generation with Binary and Continuous Non-Normal Components
2018-01-03	Biolinv	Modelling and Forecasting Biological Invasions
2018-01-03	burnr	Fire-History Analysis in R
2018-01-03	discgolf	Discourse API Client
2018-01-03	ExtremeBounds	Extreme Bounds Analysis (EBA)
2018-01-03	Hmisc	Harrell Miscellaneous
2018-01-03	httping	'Ping' 'URLs' to Time 'Requests'
2018-01-03	macleish	Retrieve Data from MacLeish Field Station
2018-01-03	mekko	Variable Width Bar Charts: Bar Mekko
2018-01-03	miRNAss	Genome-Wide Discovery of Pre-miRNAs with few Labeled Examples
2018-01-03	mixlm	Mixed Model ANOVA and Statistics for Education
2018-01-03	mobForest	Model Based Random Forest Analysis
2018-01-03	naivebayes	High Performance Implementation of the Naive Bayes Algorithm
2018-01-03	oaxaca	Blinder-Oaxaca Decomposition
2018-01-03	pangaear	Client for the 'Pangaea' Database
2018-01-03	PoisBinNonNor	Data Generation with Poisson, Binary and Continuous Components
2018-01-03	PoisBinOrd	Data Generation with Poisson, Binary and Ordinal Components
2018-01-03	qualvar	Implements Indices of Qualitative Variation Proposed by Wilcox (1973)
2018-01-03	reinforcelearn	Reinforcement Learning
2018-01-03	rprojroot	Finding Files in Project Subdirectories
2018-01-03	Rsampletrees	MCMC Sampling of Gene Genealogies Conditional on Genetic Data
2018-01-03	searchConsoleR	Google Search Console R Client
2018-01-03	sofa	Connector to 'CouchDB'
2018-01-03	wbstats	Programmatic Access to Data and Statistics from the World Bank API
2018-01-03	woeR	Weight of Evidence Based Segmentation of a Variable
2018-01-03	wordcloud2	Create Word Cloud by 'htmlwidget'
2017-12-27	PBSmodelling	GUI Tools Made Easy: Interact with Models and Explore Data
2017-12-23	addreg	Additive Regression for Discrete Data
2017-12-23	CytobankBridgeR	Bridging and Extending the CytobankAPI Package in R to the Cytobank Web Application
2017-12-22	conformalClassification	Transductive and Inductive Conformal Predictions for Classification Problems
2017-12-22	pKSEA	Prediction-Based Kinase-Substrate Enrichment Analysis
2017-12-22	spectacles	Storing, Manipulating and Analysis Spectroscopy and Associated Data
2017-12-21	alphashape3d	Implementation of the 3D Alpha-Shape for the Reconstruction of 3D Sets from a Point Cloud
2017-12-21	bdsmatrix	Routines for Block Diagonal Symmetric Matrices
2017-12-21	BullsEyeR	Topic Modelling
2017-12-21	fdcov	Analysis of Covariance Operators
2017-12-21	fractal	A Fractal Time Series Modeling and Analysis Package
2017-12-21	grapherator	A Modular Multi-Step Graph Generator
2017-12-21	OptSig	Optimal Level of Significance for Regression and Other Statistical Tests
2017-12-21	PBIBD	Partially Balanced Incomplete Block Designs
2017-12-21	RSocrata	Download or Upload 'Socrata' Data Sets
2017-12-21	samplesizeCMH	Power and Sample Size Calculation for the Cochran-Mantel-Haenszel Test
2017-12-21	seaaroundus	Sea Around Us API Wrapper
2017-12-21	simtimer	Datetimes as Integers for Discrete-Event Simulations
2017-12-21	sparseEigen	Computation of Sparse Eigenvectors of a Matrix
2017-12-21	swatches	Read, Inspect, and Manipulate Color Swatch Files
2017-12-21	TrioSGL	Trio Model with a Combination of Lasso and Group Lasso Regularization
2017-12-20	bhm	Biomarker Threshold Models
2017-12-20	datoramar	Interface to the 'Datorama' API
2017-12-20	kgc	Koeppen-Geiger Climatic Zones
2017-12-20	MonoPoly	Functions to Fit Monotone Polynomials
2017-12-20	nparACT	Non-Parametric Measures of Actigraphy Data
2017-12-20	OGI	Objective General Index
2017-12-20	rxylib	Import XY-Data into R
2017-12-20	SimCop	Simulate from Arbitrary Copulae
2017-12-20	theseus	Analysis and Visualization Tools for Microbial Community Data
2017-12-20	widgetframe	'Htmlwidgets' in Responsive 'iframes'
2017-12-19	deisotoper	Detection of Isotope Pattern of a Mass Spectrometric Measurement
2017-12-19	GeDS	Geometrically Designed Spline Regression
2017-12-19	msde	Bayesian Inference for Multivariate Stochastic Differential Equations
2017-12-19	PathSelectMP	Backwards Variable Selection for Paths using M Plus
2017-12-19	quantregForest	Quantile Regression Forests
2017-12-19	reda	Recurrent Event Data Analysis
2017-12-19	rhmmer	Utilities Parsing 'HMMER' Results
2017-12-19	rhymer	Wrapper for the 'Datamuse' API to Find Rhyming and Associated Words
2017-12-19	tis	Time Indexes and Time Indexed Series
2017-12-19	ZOIP	ZOIP Distribution, ZOIP Regression, ZOIP Mixed Regression
2017-12-18	adephylo	Exploratory Analyses for the Phylogenetic Comparative Method
2017-12-18	Canopy	Accessing Intra-Tumor Heterogeneity and Tracking Longitudinal and Spatial Clonal Evolutionary History by Next-Generation Sequencing
2017-12-18	kimisc	Kirill's Miscellaneous Functions
2017-12-18	SpatialBall	Spatial NBA Visualization and Analysis
2017-12-18	textrank	Summarize Text by Ranking Sentences and Finding Keywords
2017-12-18	Umatrix	Visualization of Structures in High-Dimensional Data
2017-12-17	AmesHousing	The Ames Iowa Housing Data
2017-12-17	CoClust	Copula Based Cluster Analysis
2017-12-17	fdasrvf	Elastic Functional Data Analysis
2017-12-17	FreeSortR	Free Sorting Data Analysis
2017-12-17	mlapi	Abstract Classes for Building 'scikit-learn' Like API
2017-12-17	PKPDmisc	Pharmacokinetic and Pharmacodynamic Data Management Functions
2017-12-17	SegCorr	Detecting Correlated Genomic Regions
2017-12-17	stringformattr	Dynamic String Formatting
2017-12-17	SyncRNG	A Synchronized Tausworthe RNG for R and Python
2017-12-17	zonator	Utilities for Zonation Spatial Conservation Prioritization Software
2017-12-16	cleanEHR	The Critical Care Clinical Data Processing Tools
2017-12-16	diveMove	Dive Analysis and Calibration
2017-12-16